109 results on '"Robert F. Whitcomb"'
Search Results
2. Entomoplasma
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Daniel R. Brown, Janet M. Bradbury, and Robert F. Whitcomb
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- 2015
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3. Mesoplasma
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Daniel R. Brown, Janet M. Bradbury, and Robert F. Whitcomb
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- 2015
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4. Rapid polyvalent screening for largescale environmental Spiroplasma surveys Triagem rápida para pesquisa ambiental de larga escala de Spiroplasma
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Frank E. French, Robert F. Whitcomb, David L. Williamson, and Laura B. Regassa
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sorologia ,mollicutes ,teste de deformação ,deformation test ,lcsh:QR1-502 ,serology ,siproplasma ,lcsh:Microbiology ,spiroplasma - Abstract
Surface serology is an important determinant in Spiroplasma systematics. Reciprocal antigen/antibody reactions between spiroplasmas and individual antisera delineate the 38 described groups and species. However, reciprocal serology is impractical for largescale studies. This report describes a successful, streamlined polyvalent screening approach used to examine isolates from an environmental survey.A sorologia de superfície é um determinante importante na sistemática de Spiroplasma. Reações antígeno-anticorpo entre spiroplasmas e antisoro individuais delineiam os 38 grupos e espécies descritos. No entanto, reações sorológicas são impraticáveis em estudos em larga-escala. Esse relato descreve uma metodologia de triagem bem sucedida a ser empregada no exame de isolados em levantamentos ambientais.
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- 2009
5. Spiroplasma species in the Costa Rican highlands: implications for biogeography and biodiversity
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Robert F. Whitcomb, Gail E. Gasparich, Frank E. French, David L. Williamson, Joseph G. Tully, and Laura B. Regassa
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Nova scotia ,animal structures ,Ecology ,Biogeography ,Strain (biology) ,Biodiversity ,Spiroplasma ,Biota ,Poeciloderas quadripunctatus ,Biology ,biology.organism_classification ,stomatognathic system ,Single species ,geographic locations ,Ecology, Evolution, Behavior and Systematics ,Nature and Landscape Conservation - Abstract
More than 1,000 Spiroplasma isolates have been obtained from horse flies and deer flies (Diptera:Tabanidae) in the United States and Canada. However, the spiroplasma biota of Central America is poorly known. In August of 1995 and 1998, 13 isolates were obtained in 14 attempts from horse flies of a single species, Poeciloderas quadripunctatus, taken in the Costa Rican highlands (1,100–2,000 m). The majority of the “isolates” proved to be mixtures of two or more Spiroplasma species, but after filter cloning, single strains emerged that were designated as representatives of the 13 accessions. Six distinct spiroplasma serogroups were identified from these isolations. Three of the strains are putative new species with no serological relationship to any other Spiroplasma species. A fourth strain is a putative new species that may be distantly related to S. helicoides, a southeastern U.S. species. These four strains are accorded herein status as representatives of new serogroups: strain BARC 4886 (group XXXV); strain BARC 4900 (group XXXVI); strain BARC 4908 (group XXXVII); and GSU5450 (group XXXVIII). A fifth Spiroplasma species was very closely related to S. lineolae, known previously only from the Georgia (U.S.) coast. The sixth was most closely related to subgroup VIII-3, known from Texas and the southeastern U.S. Discovery of six spiroplasma species in only 13 attempted isolations reflects diversity seldom equaled in southeast Georgia, and never elsewhere in the U.S. These results are consistent with a hypothesis that spiroplasma diversity increases from north (Nova Scotia) to south (Georgia and Costa Rica). The discovery of significant affinity between some spiroplasmas of the southeastern U.S. and the Costa Rican highlands was unexpected, but may reflect a climatically complex Pleistocene history.
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- 2007
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6. Evolution and devolution of minimal standards for descriptions of species of the class Mollicutes: analysis of two Spiroplasma descriptions
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Robert F. Whitcomb
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biology ,Class Mollicutes ,Evolutionary biology ,Ecology ,Spiroplasma ,General Medicine ,Classification ,biology.organism_classification ,Microbiology ,Ecology, Evolution, Behavior and Systematics ,Devolution (biology) - Published
- 2007
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7. The genus Spiroplasma and its non-helical descendants: phylogenetic classification, correlation with phenotype and roots of the Mycoplasma mycoides clade
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John I. Glass, Frank E. French, David L. Williamson, Deborah Dodge, Robert F. Whitcomb, and Gail E. Gasparich
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DNA, Bacterial ,Spiroplasma ,Molecular Sequence Data ,Mesoplasma ,DNA, Ribosomal ,Microbiology ,Evolution, Molecular ,Entomoplasmatales ,RNA, Ribosomal, 16S ,Terminology as Topic ,Polyphyly ,Serotyping ,Clade ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Genetics ,Base Composition ,biology ,Mycoplasma mycoides ,General Medicine ,biology.organism_classification ,RNA, Bacterial ,Phenotype ,Entomoplasmataceae ,Mollicutes ,Genome, Bacterial - Abstract
The genus Spiroplasma (helical mollicutes: Bacteria: Firmicutes: Mollicutes: Entomoplasmatales: Spiroplasmataceae) is associated primarily with insects. The Mycoplasma mycoides cluster (sensu Weisburg et al. 1989 and Johansson and Pettersson 2002) is a group of mollicutes that includes the type species - Mycoplasma mycoides - of Mycoplasmatales, Mycoplasmataceae and Mycoplasma. This cluster, associated solely with ruminants, contains five other species and subspecies. Earlier phylogenetic reconstructions based on partial 16S rDNA sequences and a limited sample of Spiroplasma and Mycoplasma sequences suggested that the genus Mycoplasma was polyphyletic, as the M. mycoides cluster and the grouping that consisted of the hominis and pneumoniae groups of Mycoplasma species were widely separated phylogenetically and the M. mycoides cluster was allied with Spiroplasma. It is shown here that the M. mycoides cluster arose from Spiroplasma through an intermediate group of non-helical spiroplasmal descendants - the Entomoplasmataceae. As this conclusion has profound implications in the taxonomy of Mollicutes, a detailed phylogenetic study of Spiroplasma and its non-helical descendants was undertaken. These analyses, done with maximum-parsimony, provide cladistic status; a new nomenclature is introduced here, based on 'bottom-up' rather than 'top-down' clade classification. The order Entomoplasmatales consists of four major clades: (i) the Mycoides-Entomoplasmataceae clade, which contains M. mycoides and its allies and Entomoplasma and Mesoplasma species and is a sister lineage to (ii) the Apis clade of Spiroplasma. Spiroplasma and the Entomoplasmataceae are paraphyletic, but this status does not diminish their phylogenetic usefulness. Five species that were previously unclassified phylogenetically are basal to the Apis clade sensu strictu and to the Mycoides clade. One of these species, Spiroplasma sp. TIUS-1, has very poor helicity and a very small genome (840 kbp); this putative species can be envisioned as a 'missing link' in the evolution of the Mycoides-Entomoplasmataceae clade. The other two Spiroplasma clades are: (iii) the Citri-Chrysopicola-Mirum clade (serogroups I, II, V and VIII) and (iv) the ixodetis clade (serogroup VI). As Mesoplasma lactucae represents a basal divergence within the Mycoides-Entomoplasmataceae clade, and as Entomoplasma freundtii is basal to the Mycoides clade, M. mycoides and its allies must have arisen from an ancestor in the Entomoplasmataceae. The paraphyletic grouping that consists of the Hominis and Pneumoniae groups (sensu Johansson & Pettersson 2002) of Mycoplasma species contains the ancestral roots of Ureaplasma spp. and haemoplasmas. This clade is a sister lineage to the Entomoplasmatales clade. Serological classifications of spiroplasma are very highly supported by the trees presented. Genome size and G+C content of micro-organismal DNA were moderately conserved, but there have been frequent and polyphyletically distributed genome reductions. Sterol requirements were polyphyletic, as was the ability to grow in the presence of polyoxyethylene sorbitan-supplemented, but not serum-supplemented, media. As this character is not phylogenetically distributed, Mesoplasma and Entomoplasma should be combined into a single genus. The phylogenetic trees presented here confirm previous reports of polyphyly of the genus Mycoplasma. As both clades of Mycoplasma contain several species of great practical importance, a change of the genus name for species in either clade would have immense practical implications. In addition, a change of the genus name for M. mycoides would have to be approved by the Judicial Commission. For these reasons, the Linnaean and phylogenetic classifications of Mycoplasma must for now be discrepant.
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- 2004
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8. Spiroplasma poulsonii sp. nov., a new species associated with male-lethality in Drosophila willistoni, a neotropical species of fruit fly
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Roberta B. Henegar, Joseph M. Bové, M. Konai, David L. Williamson, Jean R. Adams, Robert F. Whitcomb, Patricia Carle, Kevin J. Hackett, Joseph G. Tully, and Bungo Sakaguchi
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DNA, Bacterial ,Male ,Fastidious organism ,food.ingredient ,Spiroplasma ,Microbiology ,food ,Hemolymph ,Drosophilidae ,Animals ,Agar ,Doubling time ,Sex Ratio ,Genome size ,Ecology, Evolution, Behavior and Systematics ,Genetics ,Antigens, Bacterial ,Base Composition ,biology ,General Medicine ,biology.organism_classification ,Antibodies, Bacterial ,Electrophoresis, Gel, Pulsed-Field ,Mollicutes ,Drosophila ,Female ,Drosophila willistoni ,Tenericutes - Abstract
Progenies from some wild-caught females of Drosophila willistoni and three other sibling species are entirely female. The proclivity for production of unisexual female progeny by these flies was named the sex ratio (SR) trait and was originally thought to be genetic. However, experiments in the laboratory of Donald F. Poulson in the early 1960s demonstrated that this 'trait' was vertically transmitted and infectious, in that it could be artificially transferred by injection from infected females to non-infected females. Motile, helical micro-organisms were observed in females showing the trait. In 1979, the SR organisms were designated as group II in the informal spiroplasma classification system. The organisms proved to be extremely fastidious, but were eventually cultivated in a very complex cell-free medium (H-2) after initial co-cultivation with insect cells. Cultivation in the H-2 medium and the subsequent availability of a triply cloned strain (DW-1T) permitted comparative studies. Cells of strain DW-1T were helical, motile filaments 200-250 nm in diameter and were bound by a single trilaminar membrane. Cells plated on 1.8% Noble agar formed small satellite-free colonies 60-70 microns in diameter with dense centres and uneven edges. The temperature range for growth was 26-30 degrees C; optimum growth occurred at 30 degrees C, with a doubling time in H-2 medium of 15.8 h. The strain passed through filters with 220 nm, but not 100 nm, pores. Reciprocal serological comparisons of strain DW-1T with representatives of other spiroplasma groups showed an extensive pattern of one-way crossing when strain DW-1T was used as antigen. However, variable, usually low-level reciprocal cross-reactions were observed between strain DW-1T and representatives of group I sub-groups. The genome size of strain DW-1T was 2040 kbp, as determined by PFGE. The G + C content was 26 +/- 1 mol%, as determined by buoyant density and melting point methods. The serological and molecular data indicate that strain DW-1T is separated from group I representative strains sufficiently to justify retention of its group status. Continued group designation is also indicated by the ability of SR spiroplasmas to induce male lethality in Drosophila, their vertical transmissibility and their extremely fastidious growth requirements. Group II spiroplasmas, represented by strain DW-1T (ATCC 43153T), are designated Spiroplasma poulsonii.
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- 1999
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9. Entomoplasmataceae
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Daniel R. Brown, Janet M. Bradbury, and Robert F. Whitcomb
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- 2015
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10. Entomoplasmatales
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Daniel R. Brown, Janet M. Bradbury, and Robert F. Whitcomb
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- 2015
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11. Revised group classification of the genus Spiroplasma
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Gail E. Gasparich, Roberta B. Henegar, Frank E. French, David L. Williamson, Patricia Carle, M. Konai, Claude Chastel, Joseph M. Bové, David L. Rose, Robert F. Whitcomb, Joseph G. Tully, Kevin J. Hackett, and Jean R. Adams
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DNA, Bacterial ,Systematics ,Insecta ,Spiroplasma ,Cell Membrane ,Immunology ,Tabanus lineola ,Zoology ,Plants ,Biology ,Classification ,biology.organism_classification ,Antibodies, Bacterial ,Microbiology ,Microscopy, Electron ,Tiphiidae ,Glucose ,Bidens ,Genus Spiroplasma ,Mollicutes ,Animals ,Serologic Tests ,Taxonomy (biology) - Abstract
Significant changes have been made in the systematics of the genus Spiroplasma (class Mollicutes) since it was expanded by revision in 1987 to include 23 groups and eight sub-groups. Since that time, two additional spiroplasmas have been assigned group numbers and species names. More recently, specific epithets have been assigned to nine previously designated groups and three sub-groups. Also, taxonomic descriptions and species names have been published for six previously ungrouped spiroplasmas. These six new organisms are: Spiroplasma alleghenense (strain PLHS-1T) (group XXVI), Spiroplasma lineolae (strain TALS-2T) (group XXVII), Spiroplasma platyhelix (strain PALS-1T) (group XXVIII), Spiroplasma montanense (strain HYOS-1T) (group XXXI), Spiroplasma helicoides (strain TABS-2T) (group XXXII) and Spiroplasma tabanidicola (strain TAUS-1T) (group XXXIII). Also, group XVII, which became vacant when strain DF-1T (Spiroplasma chrysopicola) was transferred to group VIII, has been filled with strain Tab 4c. The discovery of these strains reflects continuing primary search in insect reservoirs, particularly horse flies and deer files (Diptera: Tabanidae). In the current revision, new group designations for 10 spiroplasma strains, including six recently named organisms, are proposed. Three unnamed but newly grouped spiroplasmas are strain TIUS-1 (group XXIX; ATCC 51751) from a typhiid wasp (Hymenoptera: Tiphiidae), strain BIUS-1 (group XXX; ATCC 51750) from floral surfaces of the tickseed sunflower (Bidens sp.) and strain BARC 1901 (group XXXIV; ATCC 700283). Strain BARC 2649 (ATCC 700284) from Tabanus lineola has been proposed as a new sub-group of group VIII. Strains TIUS-1 and BIUS-1 have unusual morphologies, appearing as helices at only certain stages in culture. In this revision, potentially important intergroup serological relationships observed between strain DW-1 (group II) from a neotropical Drosophila species and certain sub-group representatives of group I spiroplasmas are also reported.
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- 1998
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12. Spiroplasma Species, Groups, and Subgroups from North American Tabanidae
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Robert F. Whitcomb, Kevin J. Hackett, Patricia Carle, Gail E. Gasparich, Frank E. French, David L. Williamson, Roberta B. Henegar, and Joseph G. Tully
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Genetics ,Species groups ,Strain (chemistry) ,Ecology ,Genomic data ,Tabanus lineola ,Spiroplasma ,General Medicine ,Biology ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Microbiology ,Serology ,Geographic regions ,Mollicutes - Abstract
Twenty-one triply cloned spiroplasma strains from the United States east of the Rocky Mountains, all isolated from tabanid (Diptera:Tabanidae) flies or serologically related to strains from tabanids, were compared reciprocally by spiroplasma deformation (DF) and metabolism inhibition (MI) serological tests. Many of the strains were also tested against 28 antisera representing known spiroplasma groups, subgroups, and putative groups isolated from nontabanid hosts. Relationships among strains were indicated by reciprocal cross-reactivity in both DF and MI tests. The strains were found to represent 11 recognized spiroplasma groups or subgroups. On the basis of serological, biochemical, and genomic data, strain BARC 1901 from Tabanus lineola appeared to represent a previously unrecognized candidate group. Strain BARC 2649, also from T. lineola, also appeared to represent a new group, but its morphology, arginine utilization, and some one-way serological crossing patterns suggested that it may be distantly related to group VIII spiroplasmas. Morphological, serological, and genomic data were used to place tabanid spiroplasma strains into three informal clusters. These are (i) groups IV (strain B31) and XXXI (strain HYOS-1); (ii) the three existing subgroups and a new candidate subgroup of group VIII represented by strain BARC 1357 plus ungrouped strain BARC 2649; and (iii) 14 strains, including EC-1 and TATS-1 (group XIV); strains TN-1 and TAAS-2 (group XVIII); strains TG-1, TASS-1, and BARC 4689 (group XXIII), strains TALS-2 (group XXVII), strain TABS-2 (group XXXII), and strains TAUS-1 and TABS-1 (group XXXIII) and ungrouped but closely related strains BARC 1901, BARC 2264 and BARC 2555. Analysis of tabanids from other geographic regions probably will substantially increase the number of known spiroplasma groups from this insect family.
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- 1997
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13. Spiroplasma lineolae sp. nov., from the Horsefly Tabanus lineola (Diptera: Tabanidae)
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Patricia Carle, Roberta B. Henegar, Frank E. French, David L. Williamson, Joseph G. Tully, Gail E. Gasparich, Robert F. Whitcomb, Joseph M. Bové, and Jean R. Adams
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Base Composition ,Tabanus ,urogenital system ,Diptera ,Spiroplasma ,Immunology ,Tabanus lineola ,Biology ,biology.organism_classification ,Microbiology ,Culture Media ,Microscopy, Electron ,Sterols ,Entomoplasmatales ,Mollicutes ,Animals ,Doubling time ,Spiroplasmataceae ,Bacteria - Abstract
Spiroplasma strain TALS-2T from the viscera of the striped horsefly, Tabanus lineola, collected in Georgia was serologically distinct from other Spiroplasma species, groups, putative groups, and subgroups. Light and electron microscopy of cells of strain TALS-2T revealed helical motile cells surrounded only by a single cytoplasmic membrane. The organism grew in M1D and SP-4 liquid media. Growth also occurred in 1% serum fraction medium and in conventional horse serum medium. Growth in liquid media was serum dependent. The strain passed through 220-nm filter pores, but was retained in filters with 100-nm pores. The optimum temperature for growth was 30 degrees C. Multiplication occurred at temperatures from 20 to 37 degrees C, with a doubling time at the optimum temperature of 5.6 h in M1D broth. Strain TALS-2T catabolized glucose but hydrolyzed neither arginine nor urea. The guanine-plus-cytosine content of the DNA was 25 +/- 1 mol%. The genome size was 1,390 kbp. Six isolates serologically similar to strain TALS-2T were obtained from the same host in coastal Georgia. Three strains closely related to strain TALS-2T were isolated from the horsefly Poeciloderas quadripunctatus in Costa Rica. Strain TALS-2T (= ATCC 51749), a representative of group XXVII, is designated the type strain of a new species, Spiroplasma lineolae (Mollicutes: Entomoplasmatales).
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- 1997
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14. Laboratory Infection and Release of Spiroplasma (Entomoplasmatales: Spiroplasmataceae) from Horse Flies (Diptera: Tabanidae)
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Robert F. Whitcomb, Roberta B. Henegar, Frank E. French, and Jimmy Wedincamp
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Entomoplasmatales ,Sucrose solution ,biology ,Tabanus ,Insect Science ,Mollicutes ,Horse ,Spiroplasma ,biology.organism_classification ,Agronomy and Crop Science ,Ecology, Evolution, Behavior and Systematics ,Spiroplasmataceae ,Microbiology - Abstract
Many tabanid flies (Diptera: Tabanidae) are infected with spiroplasmas (Mollicutes: Spiroplasmataceae). Naturally-infected Tabanus gladiator Stone and T. sulcifrons Maquart flies were restrained and fed 10% sucrose to determine the exit points of Spiroplasma from tabanid flies. The flies were allowed to feed for 24 h, and the resulting oral and anal specks were cultured in MID broth. Spiroplasmas were isolated from 21 of 51 oral specks but not from 23 anal specks deposited on plastic. In contrast, when anal specks were deposited in a sucrose solution, 9 of 28 anal specks in sucrose yielded spiroplasma cultures. Tabanus limola F. and T. longiusculus Hine were offered a culture of Spiroplasma strain EC-1 on a stewed raisin or in 5% sucrose in the form of a hanging drop. After 4 d, the minced abdominal viscera of each fly were incubated in MID broth and 25 of 32 tabanids yielded cultures of Spiroplasma.
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- 1997
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15. Spiroplasma platyhelix sp. nov., a New Mollicute with Unusual Morphology and Genome Size from the Dragonfly Pachydiplax longipennis
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Joseph G. Tully, Roberta B. Henegar, M. Konai, Robert F. Whitcomb, Joseph M. Bové, Patricia Carle, David L. Williamson, and Jean R. Adams
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DNA, Bacterial ,Antigens, Bacterial ,Insecta ,biology ,Cell division ,Spiroplasma ,Immunology ,Cross Reactions ,biology.organism_classification ,Microbiology ,Cell wall ,Microscopy, Electron ,Sterols ,Pachydiplax longipennis ,Mollicutes ,Animals ,Doubling time ,Genome size ,Cell Division ,Genome, Bacterial ,Bacteria - Abstract
Spiroplasma strain PALS-1T from the gut of the dragonfly Pachydiplax longipennis was shown to be distinct from other species, groups, and subgroups of the genus Spiroplasma as determined by reciprocal serological metabolism inhibition and deformation tests. However, this strain cross-reacted extensively with representatives of other groups when it was used as an antigen. Electron microscopy of cells of strain PALS-1T revealed cells surrounded by a single cytoplasmic membrane. Light microscopy revealed helical cells that exhibited twisting motility rather than rotatory or flexing motility. Variations in the tightness of coiling were transmitted from one end of the helix to the other. The strain was resistant to penicillin, which confirmed that no cell wall was present. The organism grew well in M1D and SP-4 liquid media under either aerobic or anaerobic conditions. Growth also occurred in 1% serum fraction medium and in conventional horse serum medium. The optimum temperature for growth was 30 degrees C, at which the doubling time was 6.4 h. Multiplication occurred at temperatures from 10 to 32 degrees C. Strain PALS-1T catabolized glucose and hydrolyzed arginine but not urea. The guanine-plus-cytosine content of the DNA was 29 +/- 1 mol%. The genome size was 780 kbp, the smallest genome size in the genus Spiroplasma. Strain PALS-1 (= ATCC 51748) is designated the type strain of a new species, Spiroplasma platyhelix.
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- 1997
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16. Spiroplasma montanense sp. nov., from Hybomitra Horseflies at Northern Latitudes in North America
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Joseph M. Bové, David L. Rose, E. A. Clark, Jean R. Adams, M. Konai, Joseph G. Tully, Robert F. Whitcomb, Kevin J. Hackett, Roberta B. Henegar, Frank E. French, David L. Williamson, and Patricia Carle
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biology ,Arginine ,Spiroplasma ,General Medicine ,biology.organism_classification ,Microbiology ,Mollicutes ,Doubling time ,Hybomitra ,Genome size ,Ecology, Evolution, Behavior and Systematics ,Spiroplasmataceae ,Bacteria - Abstract
Spiroplasma strain HYOS-1Twas isolated from a tabanid fly, Hybomitra opaca. The organism was serologically distinct from other spiroplasma species, groups, and subgroups and was recently designated the representative of spiroplasma group XXXI. The cells of strain HYOS-1T, as determined by light microscopy, were long motile helices. Electron microscopic examination revealed wall-less cells delimited by a single membrane. The cells passed through 450- and 300-nm filter pores with a 10-fold reduction in titer, but failed to pass through 100-nm pores. Strain HYOS-1Tgrew very well in most conventional medium formulations for spiro-plasmas or other mollicutes. The organism grew at temperatures ranging from 5 to 41°C, and the optimum temperature was 32°C. The doubling time at the optimum temperature was 0.7 h, one of the shortest values obtained for members of the genus Spiroplasma. The strain catabolized glucose and hydrolyzed arginine but not urea. Growth of the organism was stimulated by cholesterol and serum, but the strain was nevertheless able to grow in the absence of sterols or serum. The guanine-plus-cytosine content of the DNA was about 28 ± 1 mol%, and the genome size was 1,225 kbp. On the basis of the experimental results reported here and previously reported data, group XXXI strain HYOS-1 (= ATCC 51745) is designated the type strain of a new species, Spiroplasma montanense.
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- 1997
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17. Spiroplasma lampyridicola sp. nov., from the Firefly Beetle Photuris pennsylvanicus
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Edward B. Jenkins, Jimmy Wedincamp, David L. Rose, Clauzell Stevens, Rickey L. Goins, Frank E. French, Joseph M. Bové, Robert F. Whitcomb, David L. Williamson, Roberta B. Henegar, Kevin J. Hackett, Patricia Carle, Joseph G. Tully, Ah Yin Tang, and M. Konai
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aviation ,biology ,Photuris ,Spiroplasma ,General Medicine ,Mycoplasma ,medicine.disease_cause ,biology.organism_classification ,Microbiology ,Trehalose ,aviation.aircraft_model ,chemistry.chemical_compound ,chemistry ,medicine ,Mollicutes ,Ultrastructure ,Lampyridae ,Ecology, Evolution, Behavior and Systematics ,Bacteria - Abstract
Spiroplasma strain PUP-1Twas isolated from the gut fluids of a firefly beetle (Photuris pennsylvanicus) collected in Maryland. Cells of the strain were shown by dark-field microscopy to be helical, motile filaments. Ultrastructural examination by electron microscopy revealed filamentous cells bounded by a single cytoplasmic membrane and no evidence of a cell wall. The cells were not sensitive to 500 U of penicillin per ml and grew under aerobic conditions in M1D, SP-4, and M-2 broth formulations, as well as in conventional mycoplasma medium. The doubling times at 15, 20, 25, and 30°C were 83.1, 32.0, 14.9, and 9.8 h, respectively. Suboptimal growth occurred at 37°C, and no growth was apparent in cultures maintained at 10 or 40°C. The organism required cholesterol for growth and produced acid from glucose, fructose, and trehalose; arginine and urea were not hydrolyzed. The results of previous serological analyses of strain PUP-1Tindicated that the organism was not related to the then currently established Spiroplasma species or group representatives, and the organism was classified as the representative of group XIX. Additional testing of strain PUP-1Tagainst recently recognized Spiroplasma species or group representatives by both metabolism inhibition and deformation tests confirmed the unique serological status of the organism. The guanine-plus-cytosine content of the DNA was 26 ± 1 mol%, and the genome size was 1,375 kbp. These values clearly differentiate strain PUP-1Tfrom group XXI strain W115, with which it cross-reacted reciprocally at a low level in deformation and metabolism inhibition tests. We propose that strain PUP-1 (= ATCC 43206) should be recognized as the type strain of a new species, Spiroplasma lampyridicola.
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- 1997
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18. Spiroplasma alleghenense sp. nov., a New Species from the Scorpion Fly Panorpa helena (Mecoptera: Panorpidae)
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Roberta B. Henegar, Robert F. Whitcomb, M. Konai, Joseph G. Tully, Patricia Carle, E. A. Clark, David L. Williamson, Joseph M. Bové, Jean R. Adams, and David L. Rose
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biology ,Mecoptera ,Spiroplasma ,Panorpidae ,General Medicine ,biology.organism_classification ,Microbiology ,Botany ,Mollicutes ,Doubling time ,Panorpa ,Genome size ,Ecology, Evolution, Behavior and Systematics ,Bacteria - Abstract
Spiroplasma strain PLHS-1T from the gut of a common scorpion fly (Panorpa helena) collected in the West Virginia Allegheny Mountains was distinct from other spiroplasma species, groups, and subgroups as determined by reciprocal serological metabolism inhibition and deformation tests. However, when this strain was used as an antigen, it cross-reacted extensively with representatives of other groups. Light microscopy and/or electron microscopy of cells of strain PLHS-1T revealed helical motile cells surrounded by a single cytoplasmic membrane. The strain was resistant to penicillin, which confirmed that it had no cell wall. The organism grew well in M1D and SP-4 liquid media, in 1% serum fraction medium, and in conventional horse serum medium. The optimum temperature for growth was 30°C, at which the doubling time was 6.4 h. Multiplication occurred at temperatures from 10 to 32°C. Strain PLHS-1T catabolized glucose, hydrolyzed arginine but not urea, and required sterol for growth. The guanine-plus-cytosine content of the DNA was 31 ± 1 mol%, and the genome size was 1,465 kbp. Strain PLHS-1 (= ATCC 51752) is designated the type strain of a new species, Spiroplasma alleghenense.
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- 1997
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19. Spiroplasma chrysopicola sp. nov., Spiroplasma gladiatoris sp. nov., Spiroplasma helicoides sp. nov., and Spiroplasma tabanidicola sp. nov., from Tabanid (Diptera: Tabanidae) Flies
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Jean R. Adams, Kevin J. Hackett, Truman B. Clark, Joseph G. Tully, Patricia Carle, Joseph M. Bové, Gail E. Gasparich, M. Konai, Robert F. Whitcomb, David L. Rose, Roberta B. Henegar, Frank E. French, and David L. Williamson
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Tabanus ,biology ,Strain (chemistry) ,Spiroplasma ,General Medicine ,Mycoplasma ,biology.organism_classification ,medicine.disease_cause ,Microbiology ,Sterol ,Titer ,medicine ,Mollicutes ,Ecology, Evolution, Behavior and Systematics ,Bacteria - Abstract
Four spiroplasma strains, DF-1T, TG-1T, TABS-2T, and TAUS-1T, all of which were isolated from deerflies or horseflies (Diptera: Tabanidae), were serologically distinct from previously described spiroplasma species, groups, and subgroups. Strain DF-1Toriginated from a Maryland deerfly (Chrysops sp.); strain TG-1Twas isolated from a Maryland horsefly (Tabanus gladiator); strain TAUS-1Toriginated from a member of the Tabanus abdominalis-limbatinevris complex of horseflies collected in Maryland; and strain TABS-2Twas isolated from a horsefly (Tabanus abactor) collected in Oklahoma. Cells of all of the strains appeared to be helical and motile when they were examined by dark-field microscopy. Cells of strain DF-1Tgrowing in M1D medium were short helices with less than six turns; the helical cells of the other strains were long and usually had six or more turns. The short cells of strain DF-1Tpassed through 450- and 300-nm filter pores with no reduction in titer, but the longer cells of the other strains were partially retained by 450-nm-pore-size filters. Electron microscopic examination of all of the strains revealed wall-less cells surrounded only by a single cytoplasmic membrane. All of the strains grew well in SP-4 liquid media and in conventional mycoplasma or M1D media supplemented with horse or fetal bovine serum. Strains TABS-2T, TAUS-1T, and DF-1Trequired serum or sterol for growth, but strain TG-1Twas able to grow in the absence of serum or sterol. The optimum temperatures for growth of the four strains varied from 30 to 32°C, and growth occurred at 10 to 37°C. All of the strains catabolized glucose but did not hydrolyze urea. Only strain DF-1Thydrolyzed arginine. The guanine-plus-cytosine contents of the DNAs of the strains were: DF-1T, 29 ± 1 mol%; TG-1T, 26 ± 1 mol%; TABS-2T, 27 ± 1 mol%; and TAUS-1T, 26 ± mol%. The genome sizes of strains DF-1Tand TAUS-1Twere 1,270 and 1,375 kbp, respectively. Strain DF-1 (= ATCC 43209), the representative of spiroplasma subgroup VIII-2, is designated the type strain of a new species, Spiroplasma chrysopicola. We also propose that strain TG-1T(= ATCC 43525T), the designated representative of group XXIII, should be placed in a new species, Spiroplasma gladiatoris. In addition, group XXXII spiroplasma strain TABS-2 (= ATCC 51746) is designated the type strain of Spiroplasma helicoides sp. nov., and group XXXIII representative strain TAUS-1 (= ATCC 51747) is designated the type strain of another new species, Spiroplasma tabanidicola.
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- 1997
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20. Spiroplasma litorale sp. nov., from Tabanid Flies (Tabanidae: Diptera) in the Southeastern United States
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Roberta B. Henegar, Robert F. Whitcomb, David L. Rose, Frank E. French, David L. Williamson, Kevin J. Hackett, Patricia Carle, M. Konai, Joseph M. Bové, Truman B. Clark, and Joseph G. Tully
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Cell wall ,biology ,Tabanus ,Immunology ,Mollicutes ,Doubling time ,Spiroplasma ,biology.organism_classification ,Microbiology ,Genome size ,Tabanus nigrovittatus ,Bacteria - Abstract
Spiroplasma strain TN-1T (T = type strain), a strain serologically distinct from other spiroplasma species, groups, and subgroups, was isolated from the gut of a horsefly (Tabanus nigrovittatus) from a barrier island off the coast of North Carolina. Related strains were isolated from other Tabanus spp., T. atratus, T. americanus, T. gladiator, T. lineola, T. sulcifrons, and T. zythicolor, from coastal Georgia. Cells of strain TN-1T in culture were helical and motile with an average of 5 to 10 helical turns per cell. Electron microscopic studies determined that the cells of strain TN-1T were surrounded by a single cytoplasmic membrane, and there was no evidence of a cell wall. The spiroplasma grew well in MID and SP-4 liquid media. Serum fraction (1%) medium and conventional horse serum medium also supported growth of strain TN-1T. Fried-egg colonies were not produced; instead, the strain produced small diffuse colonies that were surrounded by satellite growth. The optimum temperature for growth was 32°C, but multiplication was observed at temperatures from 10 to 41°C. The doubling time at the optimum temperature (32°C) was 1.6 h. No growth was observed at 5 or 43°C. Spiroplasma strain TN-1T passed through 220-nm filter pores but failed to pass through 100-nm filter pores. Strain TN-1T catabolized glucose but hydrolyzed neither arginine nor urea. The guanine-plus-cytosine content of the DNA was about 25 ± 1 mol%, and the genome size was 1,370 kbp. Based on results from this study and previously published data, strain TN-1T (= ATCC 43211) (group XVIII) is designated the type strain of a new spiroplasma species, Spiroplasma litorale.
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- 1997
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21. Amended Data on Arginine Utilization by Spiroplasma Species
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Robert F. Whitcomb, E. A. Clark, Joseph G. Tully, M. Camp, and Kevin J. Hackett
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Fastidious organism ,animal structures ,biology ,Strain (chemistry) ,Arginine ,Immunology ,Colorado potato beetle ,Spiroplasma ,biology.organism_classification ,Microbiology ,stomatognathic system ,Biochemistry ,Mollicutes ,Bacteria ,Spiroplasmataceae - Abstract
Hydrolysis of arginine is a classical diagnostic test for species in the mollicute order Entomoplasmatales. In this paper we report data for arginine utilization by spiroplasmas, as determined by standard methods. In addition, modified methods were developed for fastidious spiroplasmas, such as strain LD-1T (T = type strain), the Colorado potato beetle spiroplasma. Twenty-one spiroplasma strains representing 13 groups or subgroups and eight ungrouped spiroplasmas (seven of which represent putative groups) were studied. The arginine reactions of eight strains were the same as the reactions reported previously, but previously reported positive tests for spiroplasma subgroups I-5 and I-6 (Spiroplasma insolitum) could not be repeated, and the data for the latter taxa are corrected. Although other workers have reported that addition of carbohydrate to media may be necessary for the utilization of arginine, the presence of glucose tended to obscure arginine hydrolysis in our studies.
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- 1996
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22. Spiroplasma leptinotarsae sp. nov., a Mollicute Uniquely Adapted to Its Host, the Colorado Potato Beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)
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Roberta B. Henegar, Kevin J. Hackett, Jean R. Adams, M. Konai, David L. Rose, Joseph M. Bové, D. E. Lynn, Gail E. Gasparich, David L. Williamson, E. A. Clark, A. G. Wagner, Joseph G. Tully, Truman B. Clark, Patricia Carle, and Robert F. Whitcomb
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Larva ,food.ingredient ,biology ,Immunology ,Colorado potato beetle ,Spiroplasma ,biology.organism_classification ,Microbiology ,Eastern european ,food ,Botany ,Agar ,PEST analysis ,Genome size ,Leptinotarsa - Abstract
Spiroplasma strain LD-1T (T = type strain), which was isolated from the gut of a Colorado potato beetle (Leptinotarsa decemlineata) larva collected in Maryland, was serologically distinct from other spiroplasmas. Similar isolates were obtained from other L. decemlineata specimens collected in various parts of North America, in Poland, and in other eastern European countries and from Leptinotarsa texana specimens collected in Texas. Cells of strain LD-1T, which in early passages were spiral, exhibited exceptionally rapid translational motility. This rapid motility and the spiral shape were lost after extended passage in culture. The organism required serum for growth. Originally isolated in coculture with insect cells in DCCM medium, strain LD-1T adapted to several media in the absence of cocultured cells. Use of anaerobic conditions allowed primary isolation in a variety of media. The organism did not grow in serum-free media containing 2% serum fraction. Optimal growth in M1D medium occurred at 30 to 37°C (doubling time, 7.2 h). On solid M1D medium containing 2.0% Noble agar (pH 6.25) at 30°C, strain LD-1T produced discrete colonies with numerous satellites. Strain LD-1T hydrolyzed arginine, but did not utilize urea; there was evidence of weak fermentation of glucose. The guanine-plus-cytosine content of the DNA was determined to be 25 ± 1 mol%, and the genome size was 1,085 kb. The results of extensive studies of the ecology of this spiroplasma suggest that it is host specific for Leptinotarsa beetles. Strain LD-1 (= ATCC 43213) is designated the type strain of a new species, Spiroplasma leptinotarsae.
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- 1996
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23. Spiroplasma syrphidicola sp. nov., from a Syrphid Fly (Diptera: Syrphidae)
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Jean R. Adams, David L. Rose, Roberta B. Henegar, Truman B. Clark, Robert F. Whitcomb, Kevin J. Hackett, M. Konai, Joseph G. Tully, Gail E. Gasparich, Frank E. French, David L. Williamson, Patricia Carle, and Joseph M. Bové
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DNA, Bacterial ,Base Composition ,biology ,Diptera ,Spiroplasma ,Immunology ,Eristalis arbustorum ,biology.organism_classification ,Microbiology ,Cholesterol ,Chemotaxonomy ,Hemolymph ,Botany ,Mollicutes ,Animals ,Doubling time ,Genome size ,Genome, Bacterial ,Bacteria - Abstract
Spiroplasma sp. strain EA-1(T) (T = type strain) (subgroup VIII-1), which was isolated from the syrphid fly Eristalis arbustorum, was serologically distinct from other spiroplasma species, groups, and subgroups, The cells of this strain, as revealed by dark-field light microscopy, were short, helical, and motile. An electron microscopic examination revealed wall-less cells delimited by a single membrane. The unusually short cells passed through 220-nm filter pores with no reduction in titer. The organisms grew well in SM-1, M1D, and SP-4 liquid media. Growth also occurred in conventional horse serum medium and 1% serum fraction medium. Strain EA-1(T) grew at temperatures between 10 and 41 degrees C, and optimum growth occurred at 32 degrees C. The doubling time at the optimal temperature was 1.0 h. The strain catabolized glucose and hydrolyzed arginine but did not hydrolyze urea. The guanine-plus-cytosine content of the DNA was 30 +/- 1 mol%. The genome size was about 1,230 kbp. Strain Ea-1 (= ATCC 33826), which represents subgroup VIII-1, is designated the type strain of a new species, Spiroplasma syrphidicola.
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- 1996
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24. Spiroplasma diminutum sp. nov., from Culex annulus Mosquitoes Collected in Taiwan
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David L. Williamson, Janette Smyth, Joseph M. Bové, Leon Rosen, Robert F. Whitcomb, Marie-Louise Abalain-Colloc, Patricia Carle, Joseph G. Tully, and David L. Rose
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DNA, Bacterial ,0106 biological sciences ,Serotype ,food.ingredient ,Spiroplasma ,Immunology ,Taiwan ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,food ,stomatognathic system ,Animals ,Agar ,Serotyping ,030304 developmental biology ,Antiserum ,0303 health sciences ,biology ,biology.organism_classification ,Culex ,Titer ,chemistry ,Mollicutes ,Female ,Growth inhibition ,Genome, Bacterial ,Bacteria - Abstract
Initially, strain CUAS-1T (T = type strain), which was isolated from a frozen triturate of Culex annulus mosquitoes collected in Taiwan, was thought to be a member of spiroplasma group VII. This placement was based on the spiroplasma deformation test titer observed when strain CUAS-1T spiroplasmas were tested with Spiroplasma monobiae MQ-1T antiserum. The results of subsequent reciprocal spiroplasma deformation, metabolism inhibition, and growth inhibition tests clearly revealed that strain CUAS-1T is not serologically related to previously described spiroplasma groups (groups I to XXIV) and thus is a representative of a new group, group XXV. Strain CUAS-1T was characterized by using the minimal standards for mollicute species descriptions. During logarithmic-phase growth, strain CUAS-1T cells are characteristically very short helices with 1.5 to 2 helical turns (1 to 2 microns), highly motile, and bounded by a single trilaminar membrane and form granular colonies with satellites when the organism is grown aerobically on MID medium containing 1.6% agar. Growth in MID broth occurs at temperatures ranging from 10 to 37 degrees C, and the optimum temperature is 30 degrees C. Substrate utilization tests revealed that cholesterol is required for growth, that glucose is hydrolyzed, and that arginine is not hydrolyzed both in the presence and in the absence of glucose. The genome of strain CUAS-1T is 1,080 kbp long, and the guanine-plus-cytosine content is 26 +/- 1 mol%. On the basis of the results of our studies we propose that strain CUAS-1T (group XXV) should be placed in a new species, Spiroplasma diminutum. Strain CUAS-1 (= ATCC 49235) is the type strain of S. diminutum.
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- 1996
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25. Acholeplasma brassicae sp. nov. and Acholeplasma palmae sp. nov., Two Non-Sterol-Requiring Mollicutes from Plant Surfaces
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David L. Williamson, David L. Rose, Patricia Carle, Robert F. Whitcomb, Simon Eden-Green, Joseph G. Tully, Norman L. Somerson, and Joseph M. Bové
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Cocos ,0303 health sciences ,030306 microbiology ,Immunology ,Brassica ,Mycoplasma ,Biology ,medicine.disease_cause ,biology.organism_classification ,Microbiology ,Sterol ,Cell wall ,03 medical and health sciences ,Acholeplasma ,Cholesterol ,medicine ,Mollicutes ,Genome size ,Acholeplasmataceae ,Bacteria ,030304 developmental biology - Abstract
Two mollicutes (strains 0502T [T = type strain] and J233T), which were isolated from the surfaces of broccoli (Brassica oleracea var. italica) plants or the crown tissues of the coconut palm (Cocos nucifera), were capable of sustained growth in serum-free (or cholesterol-free) mycoplasma broth media. Examination by electron and dark-field microscopic techniques revealed that the cells of each strain were small, nonhelical, nonmotile, pleomorphic, and coccoid and that each cell was surrounded by a single cytoplasmic membrane. No evidence of a cell wall was found. The organisms were filterable and grew rapidly in most conventional mycoplasma culture medium formulations containing horse or fetal bovine sera under either aerobic or anaerobic conditions. The optimum temperature for growth of both organisms was 30 degrees C, but multiplication occurred over a temperature range from 18 to 37 degrees C. Both strains catabolized glucose, but did not hydrolyze arbutin, arginine, or urea. The genome size of strain 0502T was 1,215 kbp, and the DNA base composition (guanine-plus-cytosine content) was 35.5 mol%. The genome size of strain J233T was 1,610 kbp, and the DNA base composition was 30.0 mol%. The two isolates were not serologically related to each other or to the type strains of 11 previously described Acholeplasma species. Strain 0502 (= ATCC 49388) is the type strain of Acholeplasma brassicae sp. nov., and strain J233 (= ATCC 49389) is the type strain of Acholeplasma palmae sp. nov.
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- 1994
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26. Biogeography of Leafhopper Specialists of the Shortgrass Prairie: Evidence for the Roles of Phenology and Phylogeny in Determination of Biological Diversity
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Andrew L. Hicks, Robert F. Whitcomb, Dwight E. Lynn, and H. Derrick Blocker
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geography ,geography.geographical_feature_category ,Ecology ,Phenology ,Biogeography ,Biodiversity ,Vegetation ,Biology ,biology.organism_classification ,Grassland ,Leafhopper ,Phylogenetics ,Insect Science ,Botany ,Ecology, Evolution, Behavior and Systematics - Abstract
Of the vegetation that covered the United States at the time of Columbus, about half was grassland (Kuchler 1964, Sims 1988). The structure of the grasslands was diverse, shaped by amount and pattern of rainfall and by fire.
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- 1994
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27. North American Grasslands as Insect Habitat: A Photographic Essay
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Robert F. Whitcomb
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Leafhopper ,Fossil Record ,Habitat ,Ecology ,Insect Science ,Biogeography ,media_common.quotation_subject ,Insect ,Biology ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics ,media_common - Abstract
Grasses are billions of years younger than the earliest single-celled organisms and are hundreds of millions of years younger than insects. According to the fossil record, they are at least one hundred million years younger than the homopterous insects we discussed in our feature article “Biogeography of Leafhopper Specialists of the Shortgrass Prairie” (Am. Entomol. 40: 19–35). So, in a sense, the grasses, a mere 50 million years old, are almost evolutionary afterthoughts. Therefore, if only because grasses themselves are young, grasslands are very young.
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- 1994
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28. Spiroplasma cantharicola sp. nov., from Cantharid Beetles (Coleoptera: Cantharidae)
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M. Konai, C. Stevens, Robert F. Whitcomb, David L. Williamson, Kevin J. Hackett, Roberta B. Henegar, Joseph M. Bové, Patricia Carle, David L. Rose, Abalain-Colloc Ml, Truman B. Clark, Joseph G. Tully, and C. Chastel
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0106 biological sciences ,0303 health sciences ,biology ,Arginine ,Immunology ,Spiroplasma ,biology.organism_classification ,Cantharis ,01 natural sciences ,Microbiology ,Cell wall ,03 medical and health sciences ,Mollicutes ,Doubling time ,Soldier beetle ,Bacteria ,030304 developmental biology ,010606 plant biology & botany - Abstract
Spiroplasma strain CC-1T, isolated from the gut of the soldier beetle Cantharis carolinus, was serologically distinct from other spiroplasma species, groups, and subgroups. Cells of strain CC-1T were shown by light microscopy to be helical, motile filaments. Electron microscopy showed that the cells were bounded by a single cytoplasmic membrane, with no evidence of a cell wall. The organism was insensitive to penicillin. Strain CC-1T grew well in SM-1, M1D, and SP-4 liquid media under aerobic or anaerobic conditions. The strain also grew in 1% serum fraction medium. Optimal growth occurred at 32°C, with a doubling time of 2.6 h, but the strain multiplied at temperatures of 10 to 37°C. Strain CC-1T produced acid from glucose but hydrolyzed neither arginine nor urea. The guanine-plus-cytosine (G+C) content of the DNA was 26± 1 mol%. Other uncloned isolates from C. carolinus exhibited similar or identical serological patterns. On the basis of the data presented here, strain CC-1T (= ATCC 43207), previously proposed as the representative strain of subgroup XVI-1, is designated the type strain of a new species, Spiroplasma cantharicola.
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- 1993
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29. Division of Group XVI Spiroplasmas into Subgroups
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M. Konai, Abalain-Colloc Ml, David L. Williamson, Joseph G. Tully, Abalain Jh, Robert F. Whitcomb, Joseph M. Bové, Francoise Bonnet, C. Chastel, and Patricia Carle
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Gel electrophoresis ,Genetics ,0303 health sciences ,030306 microbiology ,Immunology ,EcoRI ,Spiroplasma ,Biology ,HindIII ,biology.organism_classification ,Microbiology ,03 medical and health sciences ,Restriction enzyme ,biology.protein ,Mollicutes ,Taxonomy (biology) ,Bacteria ,030304 developmental biology - Abstract
Some group XVI spiroplasmas, such as strains CC-1 (Spiroplasma cantharicola) and CB-1, are associated with cantharid beetles. Fifteen related but heterogeneous strains have been isolated from mosquitoes, other insects, and a flower in France and the United States. In the present study, these seventeen strains have been compared by deformation and metabolism inhibition serological tests, by one-dimensional protein sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and by determination of the guanine-plus-cytosine content of their DNA. Five of the 17 strains were further compared by DNA-DNA hybridization and by restriction enzyme (EcoRI and HindIII) analysis of their DNA. On the basis of the resulting data, we propose that group XVI be subdivided into three subgroups. Subgroup XVI-I is represented by strain CC-1 (ATCC 43207) from a cantharid beetle in the United States, and strain MQ-6 from a wasp; subgroup XVI-2 is represented by strain CB-1 (ATCC 43208) from a cantharid beetle and two strains from mosquitoes, all in the United States; and subgroup XVI-3 is represented by strain Ar-1357 (ATCC 51126) and contains 11 strains from mosquitoes and 1 strain from a flower, all from the Savoy region of France.
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- 1993
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30. Spiroplasma insolitum sp. nov., a New Species of Group I Spiroplasma with an Unusual DNA Base Composition
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Joseph M. Bové, Jean R. Adams, Robert F. Whitcomb, Kevin J. Hackett, David L. Rose, David L. Williamson, Joseph G. Tully, Patricia Carle, Roberta B. Henegar, Truman B. Clark, M. Konai, and E. A. Clark
- Subjects
Cell wall ,biology ,Arginine ,Chemotaxonomy ,Immunology ,Mollicutes ,Doubling time ,Spiroplasma ,biology.organism_classification ,Microbiology ,Genome size ,Bacteria - Abstract
Spiroplasma strain M55, isolated from a fall flower in Maryland, showed patterns of partial serological cross-reactivity with the other seven group I spiroplasma subgroups but was not serologically related to other spiroplasma groups. Strain M55 had less than 70% DNA-DNA homology with group I subgroups previously assigned binomial names and was unique among the group I subgroups in possessing a higher guanine-plus-cytosine content in its DNA (28 ± 1 mol%, versus 26 ± 1 mol% for other group I subgroups). The genome size was 1,850 kb (1,233 MDa). Extensive data on the metabolism of strain M55 and the community ecology of this and similar strains have been reported. These circumstances fulfill criteria proposed by the Subcommittee on the Taxonomy of Mollicutes for elevation of mollicute subgroups to species status. Accordingly, strain M55 was characterized according to proposed minimal standards for species descriptions. Cells of strain M55 were shown by light microscopy to be helical, motile filaments. Electron microscopy showed that the cells possessed no cell wall and were bounded by a single membrane; they were insensitive to penicillin (1,000 U/ml). Strain M55 was culturable in M1D and SP-4 liquid media under aerobic (with or without enhanced carbon dioxide) or anaerobic environments. Optimal growth occurred at 30°C, with a doubling time of 7.2h. Growth occurred from 15 to 37°C but not at 10 or 42°C. Strain M55 did not utilize urea or hydrolyze arginine but did produce acid from glucose. As a consequence of these studies, strain M55 is designated the type strain (M55T; ATCC 33502T) of a new species, Spiroplasma insolitum.
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- 1993
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31. Serologic and Genomic Relatedness of Group VIII and Group XVII Spiroplasmas and Subdivision of Spiroplasma Group VIII into Subgroups
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Colette Saillard, Gail E. Gasparich, Robert F. Whitcomb, Kevin J. Hackett, Frank E. French, Joseph G. Tully, M. Konai, and E. A. Clark
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0106 biological sciences ,Genetics ,0303 health sciences ,biology ,Immunology ,Spiroplasma ,Deer fly ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,Homology (biology) ,03 medical and health sciences ,Mollicutes ,Taxonomy (biology) ,Horse-fly ,Supergroup ,Polyacrylamide gel electrophoresis ,030304 developmental biology - Abstract
Spiroplasmas are currently classified in a group system. Criteria for separation of the twenty-four currently designated groups include serologic relatedness, polyacrylamide gel electrophoretic patterns of proteins, guanine-plus-cytosine base ratios, and, in some cases, DNA-DNA homology. The analysis of DNA-DNA homology and serologic data from a large array of strains recently discovered in dipteran insects reveals that group VIII strain EA-1 from a syrphid fly, strain TAAS-1 from a horse fly, and group XVII strain DF-1 from a deer fly belong to a large complex (supergroup) of strains with various degrees of interrelatedness. Strains DF-1 and EA-1 share DNA-DNA homology of 33 to 48% (high-stringency conditions), while strain TAAS-1 shares 42 to 67% homology with DF-1 and EA-1. The strains had temperature optima of 30 to 37°C, but the temperature minima and maxima reflected the geographic region of strain origin. These three strains also share G+C values of about 30 mol%, utilize arginine, and tend to grow in culture to very high titers (1011 cells per ml). The helical cells of these strains are smaller than those of other spiroplasmas and readily pass through filter pores of 220 nm. These data support the taxonomic placement of the biotypes represented by strains EA-1, DF-1, and TAAS-1 into one supergroup, group VIII, with subgroups designated as VIII-1, VIII-2, and VIII-3, respectively. It is proposed that group XVII remain vacant.
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- 1993
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32. Spiroplasma clarkii sp. nov. from the Green June Beetle (Coleoptera: Scarabaeidae)
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David L. Rose, Patricia Carle, Roberta B. Henegar, Joseph G. Tully, Joseph M. Bové, David L. Williamson, Kevin J. Hackett, Robert F. Whitcomb, M. Konai, and Vignault Jc
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0303 health sciences ,biology ,Arginine ,030306 microbiology ,Immunology ,Spiroplasma ,biology.organism_classification ,Microbiology ,Cell wall ,03 medical and health sciences ,Cotinus ,Botany ,Mollicutes ,Doubling time ,Genome size ,Bacteria ,030304 developmental biology - Abstract
Spiroplasma strain CN-5T (T = type strain), isolated from the gut of the cetoniine scarabaeid beetle Cotinus nitida, was serologically distinct from other spiroplasma species, groups, and subgroups. Cells of strain CN-5T were shown by light microscopy to be helical, motile filaments. Cells in early passages exhibited strong translational motility that tended to be lost in later passages. Electron microscopy showed that the cells were bounded by a single cytoplasmic membrane with no evidence of a cell wall. The organism was not susceptible to penicillin. Strain CN-5T grew well in SM-1, M1D, and SP-4 liquid media and on solid SP-4 medium under aerobic or anaerobic conditions. The doubling time at 30°C, the optimum temperature, was 4.3 h. The strain also grew in 1% serum fraction medium. Strain CN-5T produced acid from glucose and catabolized arginine, but did not hydrolyze urea. The guanine-plus-cytosine content of the DNA was 29 ± 1 mol%. The genome size was 1,770 kb (1,186 MDa). Other uncloned isolates obtained from C. nitida or the cetoniine hermit flower beetle Osmoderma eremicola exhibited similar or identical serological patterns. Since no other hosts were discovered in extensive studies, strain CN-5T (previously designated group IX) appears to represent a cluster of relatively host-specific cetoniine beetle-associated strains. Strain CN-5 (= ATCC 33827) is designated the type strain of a new species, Spiroplasma clarkii.
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- 1993
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33. Spiroplasma monobiae sp. nov. from the Vespid Wasp Monobia quadridens (Hymenoptera: Vespidae)
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Kevin J. Hackett, Robert F. Whitcomb, David L. Rose, M. Konai, Jean R. Adams, Joseph M. Bové, Patricia Carle, David L. Williamson, Roberta B. Henegar, Truman B. Clark, and Joseph G. Tully
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0106 biological sciences ,0303 health sciences ,biology ,Vespidae ,Immunology ,Spiroplasma ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,Monobia quadridens ,03 medical and health sciences ,Hemolymph ,Mollicutes ,Doubling time ,Genome size ,Bacteria ,030304 developmental biology - Abstract
Spiroplasma strain MQ-1T (T = type strain) from the hemolymph of the vespid wasp Monobia quadridens differed serologically from other spiroplasma species, groups, and subgroups. Cells of strain MQ-1T were helical and motile and possessed a single cytoplasmic membrane, with no evidence of a cell wall. The organism grew in conventional mycoplasma medium, in serum fraction, SM-1, M1D, and SP-4 liquid media, and on SP-4 solid medium in either aerobic or anaerobic environments. The optimum temperature for growth was 32°C, but multiplication occurred over a wide temperature range (10 to 37°C). The doubling time at 32°C in M1D medium was 1.9 h. Strain MQ-1T catabolized glucose but hydrolyzed neither arginine nor urea. Previous work showed that strain MQ-1T has a unique methylase, previously known only in eucaryotes. Also, strain MQ-1T induces production of tumor necrosis factor in bone marrow macrophages. The guanine-plus-cytosine content of the DNA was 28 ± 1 mol%. The genome size of strain MQ-1T was 940 kb (627 MDa); a similar strain, MQ-8, had a genome size of 985 kb (657 MDa). Strain MQ-1T and its allies have the smallest genomes known in the genus Spiroplasma. Strain MQ-1 (=ATCC 33825) is designated the type strain of a new species, Spiroplasma monobiae.
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- 1993
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34. Leafhoppers (Homoptera: Cicadellidae): a major family adapted to grassland habitats
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K.G. Andrew Hamilton and Robert F. Whitcomb
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- 2010
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35. Distribution and biological control significance of Colorado potato beetle spiroplasmas in North America
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William W. Cantelo, Roberta B. Henegar, M. Konai, Kevin J. Hackett, Dwight E. Lynn, Robert F. Whitcomb, J. L. Vaughn, Gail E. Gasparich, and Robert F. W. Schroder
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Larva ,biology ,business.industry ,Ecology ,fungi ,Colorado potato beetle ,Pest control ,Biological pest control ,Spiroplasma ,Doryphora ,biology.organism_classification ,Insect Science ,Bacillus thuringiensis ,business ,Agronomy and Crop Science ,Leptinotarsa - Abstract
The Colorado potato beetle spiroplasma, a helical wall-less bacterium, attaches to the midgut of larval and adult Leptinotarsa decemlineata (Say). Despite its lack of pathogenicity to the beetle, its host specificity and ease of transmission may prove useful in biological control if insecticidal genes (e.g. the Bacillus thuringiensis subsp. tenebrionis δ-endotoxin gene) can be incorporated into its genome. Toward this goal, Colorado potato beetles were collected from various sites in North America and examined for spiroplasmas. Spiroplasmas were observed in the gut contents of L. decemlineata adults collected in Canada (Alberta and Quebec) and the United States (Arizona, Maine, Maryland, Massachusetts, Michigan, Minnesota, New Jersey, New Mexico, New York, North Carolina, Utah, and Washington) and from L. texana Schaeffer adults collected in Texas. None were naturally associated with adults of the related species, Doryphora quadrasignata Germar, collected in Brazil. Seven isolates adapted to insect cell-free media are now available for molecular studies.
- Published
- 1992
- Full Text
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36. An Australian environmental survey reveals moderate Spiroplasma biodiversity: characterization of four new serogroups and a continental variant
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April C. MurphyA.C. Murphy, Haritha L. JandhyamH.L. Jandhyam, Laura B. RegassaL.B. Regassa, David S. BostickD.S. Bostick, Gail E. Gasparich, Robert F. Whitcomb, Alexander B. ZarzuelaA.B. Zarzuela, C. Ryan BatesC.R. Bates, and Frank E. FrenchF.E. French
- Subjects
Serotype ,Spiroplasma ,Immunology ,Zoology ,Applied Microbiology and Biotechnology ,Microbiology ,stomatognathic system ,Genetics ,Animals ,Serotyping ,Clade ,Molecular Biology ,Phylogenetic tree ,biology ,Ecology ,Host (biology) ,Strain (biology) ,Diptera ,Australia ,General Medicine ,Biodiversity ,biology.organism_classification ,16S ribosomal RNA ,Mollicutes - Abstract
An environmental survey of tabanid host spiroplasma carriage was undertaken at 10 collection sites in Australia during February 1999. A total of 164 tabanid flies, representing 27 species, were collected and sustainable spiroplasma isolations were made from 48 of the flies. The morphology of the cultured spiroplasmas, as observed in M1D medium under dark-field microscopy, was typical of either (i) Apis group spiroplasmas (relatively thick cells (approximately 150 nm) with six or more turns) or (ii) chrysopicola-syrphidicola-TAAS-1 clade spiroplasmas (narrower, often much shorter cells) serologically related to Spiroplasma serogroup VIII. Repetitive serological analyses, involving successive rounds of dilution cloning and serological reevaluation, identified one serotype referable to the Spiroplasma serogroup VIII strain complex and five putative members of the Apis clade. Apis clade placement for these five groups was verified using 16S rRNA phylogenetic analyses. Among the Apis clade members, one serotype representing 11 isolates was identified as a geographic variant of Spiroplasma turonicum. Spiroplasma turonicum (Tab4C) was originally isolated from a tabanid Haematopoda sp. in France. The other 34 isolates represented four new serogroups (= putative species). The following strains are proposed as representatives of the new serogroups: strain GSU5478 (group XXXIX), strain GSU5490 (group XL), strain GSU5508 (group XLI), and strain GSU5603 (group XLII). In summary, six serogroups were observed from isolations originating from seven distinct sample sites in Australia. Surprisingly, the serotype with the greatest geographical range (five sites from 16 degrees 48.9'S to 35 degrees 40.0'S) and the greatest host diversity (nine species over three genera) was the geographic variant of S. turonicum, which had only been reported previously in France.
- Published
- 2009
37. Rapid polyvalent screening for largescale environmental Spiroplasma surveys
- Author
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Robert F. Whitcomb, Frank E. French, David L. Williamson, and Laura B. Regassa
- Subjects
sorologia ,mollicutes ,animal structures ,teste de deformação ,stomatognathic system ,deformation test ,serology ,siproplasma ,Biology ,Microbiology ,spiroplasma - Abstract
Surface serology is an important determinant in Spiroplasma systematics. Reciprocal antigen/antibody reactions between spiroplasmas and individual antisera delineate the 38 described groups and species. However, reciprocal serology is impractical for largescale studies. This report describes a successful, streamlined polyvalent screening approach used to examine isolates from an environmental survey. A sorologia de superfície é um determinante importante na sistemática de Spiroplasma. Reações antígeno-anticorpo entre spiroplasmas e antisoro individuais delineiam os 38 grupos e espécies descritos. No entanto, reações sorológicas são impraticáveis em estudos em larga-escala. Esse relato descreve uma metodologia de triagem bem sucedida a ser empregada no exame de isolados em levantamentos ambientais.
- Published
- 2009
38. Acholeplasma seiffertii sp. nov., a Mollicute from Plant Surfaces
- Author
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Jean Claude Vignault, Monique Garnier, Colette Saillard, Francoise Bonnet, Patricia Carle, David L. Rose, Robert F. Whitcomb, Joseph M. Bové, and Joseph G. Tully
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chemistry.chemical_classification ,0303 health sciences ,Molecular mass ,biology ,030306 microbiology ,Immunology ,Arbutin ,Fatty acid ,Mannose ,Mycoplasma ,medicine.disease_cause ,biology.organism_classification ,Microbiology ,Cell wall ,03 medical and health sciences ,chemistry.chemical_compound ,chemistry ,medicine ,Mollicutes ,Fetal bovine serum ,030304 developmental biology - Abstract
Two mollicutes (strains F7T [T = type strain] and F28) isolated from floral surfaces of plants growing in Morocco and France were capable of sustained growth in serum-free (or cholesterol-free) mycoplasma broth media. The two isolates were found to be genomically and serologically related. Morphologic examination of the organisms by electron and dark-field microscopic techniques showed that each strain consists of small, nonhelical, nonmotile, pleomorphic coccoid cells surrounded by a single cytoplasmic membrane. No evidence of cell walls was observed. Growth in serum-free or cholesterol-free medium was sustained only when the medium contained a Tween 80 fatty acid mixture (0.01 or 0.04%). The organisms grew rapidly in most conventional mycoplasma culture medium formulations containing horse or fetal bovine serum or a bovine serum fraction and under either aerobic or anaerobic environments. The optimum temperature for growth was 28°C, but multiplication occurred over a temperature range from 20 to 35°C. Both strains catabolized glucose and mannose, but did not hydrolyze arbutin, arginine, or urea. The molecular mass of the genome of strain F7T was determined to be about 886 megadaltons, while the base composition (guanine-plus-cytosine content) of the DNA was found to be 30.0 mol%. The two isolates were serologically unrelated to type strains of the 11 previously described Acholeplasma species and to 10 other unclassified sterol-nonrequiring mollicutes cultivated from various animal, plant, or insect sources. Strain F7 (= ATCC 49495) is the type strain of Acholeplasma seiffertii sp. nov.
- Published
- 1991
- Full Text
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39. Spiroplasma chinense sp. nov. from Flowers of Calystegia hederacea in China
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Y. X. Chen, Y. H. Guo, Robert F. Whitcomb, David L. Williamson, X. D. Ye, T. A. Chen, Joseph G. Tully, and David L. Rose
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Gel electrophoresis ,Cell wall ,Calystegia ,biology ,Immunology ,Mollicutes ,Spiroplasma ,Periplasmic space ,Convolvulaceae ,biology.organism_classification ,Microbiology ,Bacteria - Abstract
Strain CCHT (T = type strain), a helical procaryote that was isolated from floral surfaces of Calystegia hederacea (Convolvulaceae) in Jiangsu, People's Republic of China, was found to be a sterol-requiring member of the class Mollicutes. The cells of strain CCHT were small, motile helices that were devoid of a cell wall or periplasmic fibrils. The organism passed through filters with average pore diameters of 300 and 220 nm. Strain CCHT grew rapidly in liquid media having simple compositions, reaching stationary growth phase within 24 h at 30°C. Growth occurred at temperatures ranging from 25 to 37°C. The organism fermented glucose and other sugars with acid production and showed weak arginine hydrolysis. It did not hydrolyze urea. In preliminary electrophoretic analyses, the cell protein patterns of strain CCHT were distinct from those of eight other spiroplasmas commonly found on flowers. Using enzyme-linked immunosorbent assays and antisera to strain CCHT, we found no serological relationship to antigens of the 23 previously recognized spiroplasma groups or species. These distinctions were confirmed by performing reciprocal metabolism inhibition and deformation serological tests, in which we used antigens and antisera to representatives of spiroplasma groups I through XXIII. The base composition (guanine-plus-cytosine content) of the DNA of strain CCHT was about 29.0 mol%. On the basis of these findings, we propose that spiroplasma strain CCH (= ATCC 43960) be designated group XXIV and the type strain of a new species, Spiroplasma chinense.
- Published
- 1990
- Full Text
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40. Mycoplasma lactucae sp. nov., a Sterol-Requiring Mollicute from a Plant Surface
- Author
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Robert F. Whitcomb, David E. Colflesh, David L. Rose, Joseph G. Tully, Joseph M. Bové, John P. Kocka, Norman L. Somerson, David L. Williamson, and Patricia Carle
- Subjects
0303 health sciences ,030306 microbiology ,Immunology ,Lactuca ,Mycoplasma ,Biology ,biology.organism_classification ,16S ribosomal RNA ,medicine.disease_cause ,Microbiology ,Cell wall ,Sterols ,03 medical and health sciences ,Plant virus ,Vegetables ,Mollicutes ,medicine ,Genome size ,Phylogeny ,Bacteria ,030304 developmental biology - Abstract
Strain 831-C4T (T = type strain), isolated from the surface of lettuce plants (Lactuca sativa) obtained from a retail food market, was shown to be a sterol-requiring mollicute. Morphological examination of this organism by electron and dark-field microscopic techniques showed that it consists of small, nonhelical, nonmotile, pleomorphic coccoid cells, with individual cells surrounded by a single cytoplasmic membrane. No evidence of a cell wall was observed. The organism grew rapidly in all conventional culture medium formulations for mollicutes in either aerobic or anaerobic environments. The optimum temperature for growth was 30 degrees C, but multiplication occurred at 18 to 37 degrees C. Strain 831-C4T catabolized glucose, but hydrolysis of arginine or urea could not be demonstrated. The genome size of strain 831-C4T was determined to be about 569 megadaltons, while the base composition (guanine-plus-cytosine content) of the DNA was 30.0 mol%. Recent studies in which we compared the 16S rRNA sequences of strain 831-C4T with those of more than 40 other mollicutes indicated that this organism is phylogenetically related to the Spiroplasma-Mycoplasma mycoides clade. Strain 831-C4T was serologically unrelated to the type strains of previously described Mycoplasma species and to 18 other unclassified sterol-requiring isolates cultivated from various animal, plant, or insect sources. Strain 831-C4T (= ATCC 49193) is the type strain of Mycoplasma lactucae sp. nov.
- Published
- 1990
- Full Text
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41. Revised minimal standards for description of new species of the class Mollicutes (division Tenericutes)
- Author
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Janet M. Bradbury, Robert F. Whitcomb, and Daniel R. Brown
- Subjects
Systematics ,DNA, Bacterial ,Genotype ,Microbiology ,DNA, Ribosomal ,Article ,Species Specificity ,Phylogenetics ,RNA, Ribosomal, 16S ,Terminology as Topic ,Nomenclature ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Genetics ,Tenericutes ,biology ,Phylogenetic tree ,Nucleic Acid Hybridization ,General Medicine ,Sequence Analysis, DNA ,Reference Standards ,biology.organism_classification ,Bacterial Typing Techniques ,Phenotype ,Serology ,Evolutionary biology ,Molecular phylogenetics ,Mollicutes ,Taxonomy (biology) - Abstract
Minimal standards for novel species of the classMollicutes(trivial term, mollicutes), last published in 1995, require revision. The International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy ofMollicutesproposes herein revised standards that reflect recent advances in molecular systematics and the species concept for prokaryotes. The mandatory requirements are: (i) deposition of the type strain into two recognized culture collections, preferably located in different countries; (ii) deposition of the 16S rRNA gene sequence into a public database, and a phylogenetic analysis of the relationships among the 16S rRNA gene sequences of the novel species and its neighbours; (iii) deposition of antiserum against the type strain into a recognized collection; (iv) demonstration, by using the combination of 16S rRNA gene sequence analyses, serological analyses and supplementary phenotypic data, that the type strain differs significantly from all previously named species; and (v) assignment to an order, a family and a genus in the class, with an appropriate specific epithet. The 16S rRNA gene sequence provides the primary basis for assignment to hierarchical rank, and may also constitute evidence of species novelty, but serological and supplementary phenotypic data must be presented to substantiate this. Serological methods have been documented to be congruent with DNA–DNA hybridization data and with 16S rRNA gene placements. The novel species must be tested serologically to the greatest extent that the investigators deem feasible against all neighbouring species whose 16S rRNA gene sequences show >0.94 similarity. The investigator is responsible for justifying which characters are most meaningful for assignment to the part of the mollicute phylogenetic tree in which a novel species is located, and for providing the means by which novel species can be identified by other investigators. The publication of the description should appear in a journal having wide circulation. If the journal is not theInternational Journal of Systematic and Evolutionary Microbiology, copies of the publication must be submitted to that journal so that the name may be considered for inclusion in a Validation List as required by theInternational Code of Bacteriological Nomenclature(theBacteriological Code). Updated informal descriptions of the classMollicutesand some of its constituent higher taxa are available as supplementary material in IJSEM Online.
- Published
- 2007
42. Spiroplasmataceae
- Author
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David L. Williamson, Gail E. Gasparich, Laura B. Regassa, Collette Saillard, Joël Renaudin, Joseph M. Bové, and Robert F. Whitcomb
- Published
- 2015
- Full Text
- View/download PDF
43. Spiroplasma diabroticae sp. nov., from the Southern Corn Rootworm Beetle, Diabrotica undecimpunctata (Coleoptera: Chrysomelidae)
- Author
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Kevin J. Hackett, M. Konai, Joseph M. Bové, Robert F. Whitcomb, Patricia Carle, Joseph G. Tully, David L. Rose, Roberta B. Henegar, and David L. Williamson
- Subjects
DNA, Bacterial ,Sequence analysis ,Spiroplasma ,Molecular Sequence Data ,Immunology ,Microbial Sensitivity Tests ,Cross Reactions ,Arginine ,Microbiology ,RNA, Ribosomal, 16S ,Botany ,Hemolymph ,Animals ,Urea ,Diabrotica undecimpunctata ,Bacteriological Techniques ,Base Composition ,biology ,Sequence Analysis, DNA ,Ribosomal RNA ,biology.organism_classification ,16S ribosomal RNA ,Culture Media ,Coleoptera ,Microscopy, Electron ,Sterols ,Glucose ,Mollicutes ,Bacteria - Abstract
Spiroplasma strain DU-1T (T = type strain), which was isolated from hemolymph of the corn rootworm Diabrotica undecimpunctata (Coleoptera:Chrysomelidae), was serologically distinct from other spiroplasma species, groups, and subgroups. Cells of strain DU-1T were shown by light microscopy to be helical motile filaments. Electron microscopy revealed cells bounded by a single cytoplasmic membrane, with no evidence of a cell wall. The organism was not sensitive to 500 U of penicillin per ml. Strain DU-1T grew well in SM-1, M1D, and SP-4 liquid media, in broth supplemented with 1% bovine serum fraction or conventional horse serum, and under both aerobic and anaerobic conditions. This organism did not appear to have a sterol requirement for growth, as has been reported for several other Spiroplasma species or strains. Optimal growth occurred at 32 degrees C, with a doubling time of 0.9 h; strain DU-1T multiplied at 10 to 41 degrees C but failed to grow at 5 or 43 degrees C. It produced acid from glucose but hydrolyzed neither arginine nor urea. The results of reciprocal serologic tests in which antigens or antisera to established Spiroplasma species, groups, subgroups, and putative groups were used indicated that strain DU-1T was serologically distinct. This organism has a DNA guanine-plus-cytosine content of 25 +/- 1 mol% and a genome size of 1,350 kbp. Strain DU-1T is a member of a cluster of fast-growing insect-associated spiroplasmas, as determined by sequence analysis of 16S rRNA. On the basis of the results of this study and previously published data, strain DU-1 (= ATCC 43210) is designated the type strain of a new species, Spiroplasma diabroticae.
- Published
- 1997
- Full Text
- View/download PDF
44. Differentiation of group VIII Spiroplasma strains with sequences of the 16S-23S rDNA intergenic spacer region
- Author
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April C. Murphy, Robert F. Whitcomb, Laura B. Regassa, Kimberly M. Stewart, Tao Lin, and Frank E. French
- Subjects
Genetics ,DNA, Bacterial ,Phylogenetic tree ,Sequence analysis ,Spiroplasma ,Immunology ,Molecular Sequence Data ,General Medicine ,Sequence Analysis, DNA ,Biology ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Microbiology ,Maximum parsimony ,Intergenic region ,DNA, Ribosomal Spacer ,Mollicutes ,Serotyping ,Clade ,Molecular Biology ,Neighbor joining ,Phylogeny - Abstract
Spiroplasma species (Mollicutes: Spiroplasmataceae) are associated with a wide variety of insects, and serology has classified this genus into 34 groups, 3 with subgroups. The 16S rRNA gene has been used for phylogenetic analysis of spiroplasmas, but this approach is uninformative for group VIII because the serologically distinct subgroups generally have similarity coefficients >0.990. Therefore, we investigated the utility of the 16S–23S rRNA spacer region as a means to differentiate closely related subgroups or strains. We generated intergenic sequences and detailed serological profiles for 8 group VIII Spiroplasma strains. Sequence analyses using Maximum Parsimony, Neighbor Joining, and Maximum Likelihood placed the strains into 2 clades. One clade consisted of strains BARC 2649 and GSU5367. The other clade was divided into clusters containing representatives of the 3 designated group VIII subgroups (EA-1, DF-1, and TAAS-1) and 3 previously unclassified strains. The stability of the positions of the strains in various analytical models and the ability to provide robust support for groupings tentatively supported by serology indicates that the 16S–23S intergenic rDNA sequence will prove useful in intragroup analysis of group VIII spiroplasmas.Key words: Mollicutes, Spiroplasma, phylogeny, Tabanidae.
- Published
- 2005
45. Spiroplasma corruscae sp. nov., from a firefly beetle (Coleoptera: Lampyridae) and tabanid flies (Diptera: Tabanidae)
- Author
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Truman B. Clark, Robert F. Whitcomb, M. Konai, Roberta B. Henegar, Joseph M. Bové, Joseph G. Tully, E. A. Clark, Kevin J. Hackett, Frank E. French, David L. Williamson, Patricia Carle, David L. Rose, and Gail E. Gasparich
- Subjects
aviation ,Diptera ,Spiroplasma ,Immunology ,Ellychnia corrusca ,Mycoplasma ,Biology ,medicine.disease_cause ,biology.organism_classification ,Microbiology ,Sterol ,Cell wall ,Coleoptera ,aviation.aircraft_model ,medicine ,Mollicutes ,Animals ,Lampyridae ,Bacteria - Abstract
Spiroplasma strain EC-1T (T = type strain), which was isolated from the gut of a lampyrid beetle (Ellychnia corrusca) in Maryland, was serologically distinct from other spiroplasma species and groups. Similar strains were obtained from other E. corrusca specimens, and, later, numerous isolates of similar or partially related strains were obtained from several species of tabanid files. Cells of strain EC-1T were helical, motile filaments that were bound by a single cytoplasmic membrane, and there was no evidence of a cell wall. The cells were filterable through 220-nm-pore-size membrane filters but not through 100-nm-pore-size membrane filters. The organism was absolutely resistant to penicillin (1,000 U/ml) and required sterol for growth. Strain EC-1T grew well in M1D and SP-4 liquid media and could be cultivated in the Edward formulation of conventional mycoplasma medium and in 1% serum fraction medium. Optimal growth occurred at 32 degrees C (doubling time, 1.5 h). Strain EC-1T multiplied at 10 to 41 degrees C, but not at 5 or 43 degrees C. This organism produced acid from glucose, but did not hydrolyze arginine or utilize urea. The guanine-plus-cytosine content of the DNA was determined to be 26.3 mol% by the melting temperature method and 27.0 mol% by the buoyant density method. As a result of our studies, strain EC-1 (= ATCC 43212) is designated the type strain of a new species, Spiroplasma corruscae.
- Published
- 1996
46. Experimental infections of plants by spiroplasmas
- Author
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Xavier Foissac, Jean-Luc Danet, Robert F. Whitcomb, Joseph M. Bové, C. Saillard, Laboratoire de biologie cellulaire et moléculaire, Institut National de la Recherche Agronomique (INRA), J.G. Tully (Editeur), S. Razin (Editeur), and ProdInra, Migration
- Subjects
0106 biological sciences ,[SDV]Life Sciences [q-bio] ,media_common.quotation_subject ,01 natural sciences ,law.invention ,03 medical and health sciences ,stomatognathic system ,law ,Nymph ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,media_common ,Spiroplasma citri ,0303 health sciences ,TECHNIQUE ,biology ,030306 microbiology ,VECTEUR ,fungi ,Longevity ,biology.organism_classification ,Virology ,[SDV] Life Sciences [q-bio] ,Leafhopper ,INSECTE ,Circulifer haematoceps ,Transmission (mechanics) ,Vector (epidemiology) ,Instar ,010606 plant biology & botany - Abstract
Publisher Summary This chapter presents an example of the technique's application: experimental infection of Circulifer haematoceps , the vector of citrus stubborn disease in the Mediterranean area by Spiroplasma citri , and transmission to periwinkles. In all tests, females are preferred to males or last instar nymphs because their longevity is greater under experimental conditions. Spiroplasmas have never been transmitted to plants mechanically, experimental infection must be accomplished by using leafhopper vectors to inoculate plants. The infection rates of C. haematoceps by S. citri and rates of transmission to periwinkles by infected insects are dependent on the method of infection. All exposed insects are infected and transmit to healthy plants with 20-30% efficiency. The transmission rate varies among S. citri strains. Some strains are transmitted poorly or well while other strains are not transmitted.
- Published
- 1996
- Full Text
- View/download PDF
47. Identification of Mollicutes from Insects
- Author
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Kevin J. Hackett and Robert F. Whitcomb
- Subjects
biology ,media_common.quotation_subject ,Zoology ,Spiroplasma ,Mesoplasma ,Insect ,Entomoplasma species ,biology.organism_classification ,Isolation (microbiology) ,Microbiology ,Acholeplasma ,stomatognathic system ,Mollicutes ,Identification (biology) ,media_common - Abstract
This chapter focuses on the identification of mollicutes from insects. Detection and identification techniques for various Spiroplasma, Acholeplasma, Mesoplasma, and Entomoplasma species in insect hosts are described. Conventional cultural and serologic methods usually suffice for isolation and identification of these mollicutes. However, mixed spiroplasma infections are frequently observed in insect hosts, such as tabanids, complicating many conventional serologic procedures that require purified antigens for species identification. New genera of organisms have been discovered in arthropods and species and groups from the diverse genera have proliferated.
- Published
- 1996
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48. Diagnosis of spiroplasma infections in plants and insects
- Author
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C. Saillard, Robert F. Whitcomb, C. Barthe, Joseph M. Bové, ProdInra, Migration, J.G. Tully (Editeur), S. Razin (Editeur), Laboratoire de biologie cellulaire et moléculaire, and Institut National de la Recherche Agronomique (INRA)
- Subjects
0303 health sciences ,030306 microbiology ,[SDV]Life Sciences [q-bio] ,Hybridization probe ,Symptom development ,Spiroplasma ,Biology ,biology.organism_classification ,Virology ,3. Good health ,law.invention ,[SDV] Life Sciences [q-bio] ,INSECTE ,03 medical and health sciences ,chemistry.chemical_compound ,stomatognathic system ,chemistry ,law ,Polyclonal antibodies ,biology.protein ,ComputingMilieux_MISCELLANEOUS ,Polymerase chain reaction ,DNA ,030304 developmental biology - Abstract
This chapter presents the techniques used for diagnosis of spiroplasma infections in plants and insects. Enzyme-linked immunosorbent assay (ELISA) techniques that employ polyclonal antibodies prepared from cultured organisms have proved to be effective in the diagnosis of S. kunkelii . Epidemiological studies of the spiroplasma require a detection method that is specific and readily adaptable to field-collected material. A new test based on DNA probe technology has been developed that permits the detection of S. citri in infected plants prior to symptom development. This test uses the polymerase chain reaction (PCR), which increases the DNA copy number of a known sequence. The use of PCR for the detection of S. citri in plants was developed on S. citri -infected periwinkles. The sensitivity of this detection method was 100 to 1000 times higher than that of ELISA or culture assay. Because crude plant extracts often inhibit PCR and decrease the sensitivity of the test, a new procedure, immunocapture PCR (IC-PCR), has been developed. This test simplifies sample preparation and enhances the specificity and sensitivity of conventional PCR.
- Published
- 1996
- Full Text
- View/download PDF
49. Spiroplasma velocicrescens sp. nov., from the vespid wasp Monobia quadridens
- Author
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David L. Rose, Kevin J. Hackett, Joseph M. Bové, David L. Williamson, Robert F. Whitcomb, Truman B. Clark, Roberta B. Henegar, M. Konai, Joseph G. Tully, and Patricia Carle
- Subjects
DNA, Bacterial ,Spiroplasma ,Immunology ,Wasps ,Arginine ,Microbiology ,Monobia quadridens ,Cell wall ,Hemolymph ,Botany ,Doubling time ,Animals ,Urea ,Serotyping ,Genome size ,Base Composition ,biology ,Temperature ,biology.organism_classification ,Culture Media ,Cholesterol ,Glucose ,Mollicutes ,Bacteria - Abstract
Spiroplasma strain MQ-4T (T = type strain), which was isolated from the hemolymph of the vespid wasp Monobia quadridens, was serologically distinct from other spiroplasma species, groups, putative groups, and subgroups. Each strain MQ-4T cell was helical and motile and was surrounded by a single cytoplasmic membrane; there was no evidence of a cell wall. The strain grew well in 1% serum fraction medium, as well as in SM-1, M1D, and SP-4 liquid media, under both aerobic and anaerobic conditions. Strain MQ-4T grew at temperatures ranging from 10 to 41 degrees C but did not grow at 43 degrees C. The strain grew optimally at 37 degrees C with a doubling time of 0.6 h, the shortest doubling time recorded for any spiroplasma. Strain MQ-4T catabolized glucose and arginine but did not hydrolyze urea. The guanine-plus-cytosine content of the DNA was about 27.5 +/- 1 mol%. The genome size was 1,480 kbp (940 MDa). Strain MQ-4 (= ATCC 35262) is designated the type strain of a new species, Spiroplasma velocicrescens.
- Published
- 1995
50. MINIMAL STANDARDS FOR DESCRIPTION OF NEW SPECIES OF THE CLASS MOLLICUTES
- Author
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Joseph G. Tully and Robert F. Whitcomb
- Subjects
Type (biology) ,Taxon ,biology ,Class Mollicutes ,Genus ,Evolutionary biology ,Strain (biology) ,Mollicutes ,Class (philosophy) ,Genus Ureaplasma ,biology.organism_classification ,Microbiology - Abstract
This chapter focuses on minimal standards for description of new species of the class mollicutes. The new document recommends basic requirements for the naming of new species, designation of a type strain of the species, assignment to order, family and genus of the class, demonstration that the type strain and related strains differ significantly from all previously named species, deposition of the type strain in a recognized culture collection, and publication of the description in a journal of wide circulation. The current classification of the Mollicutes into orders, families, and genera is presented, along with some of the criteria used to distinguish the higher taxa. All tests on which the taxonomic description is based are carried out on the cloned strain. Placement of the organism in Mollicutes requires examination by appropriate thin-sectioning electron microscopic procedures, showing cells bounded by a single membrane and devoid of a cell wall. Temperature requirements for growth are useful in differentiation of some families. Tests for assaying optimum temperature and for establishing the range of temperatures at which growth occurs have been described. The demonstration of urea hydrolysis, resulting in an increase of pH as carbon dioxide and ammonia are produced, is a mandatory and minimum requirement for assigning a new species to the genus Ureaplasma.
- Published
- 1995
- Full Text
- View/download PDF
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