232 results on '"Riley, John H"'
Search Results
2. Asthma similarities across ProAR (Brazil) and U-BIOPRED (Europe) adult cohorts of contrasting locations, ethnicity and socioeconomic status
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Alcantara-Neves, N., Almeida, P.C.A., Amorim, L., Araujo, M.I., Barnes, K.C., Barreto, M.L., Belitardo, E., Bião-Lima, V., Cardoso, L., Camargos, P.A., Chatkin, J.M., Costa, R.S., Coelho, A.C.C., Cooper, P.J., Cruz, A.A., Cruz, C.S., Cunha, J., de Jesus, J.V., Fernandes, J., Franco, R.A., Gomes-Filho, I., Lima-Matos, A., Figueiredo, C.A., Lessa, M.A., Lins, L., Mello, L.M., Moura-Santos, P., Muniz, I.S., Paixao-Araujo, I., Pinheiro, G.P., Ponte, E.V., Rodrigues, L.C., Santana, C.V.N., Santos-Lima, G., Souza, T.M.O., Souza-Machado, A., Souza-Machado, C., Stelmach, R., Vasquez, V.S., Adcock, I.M., Ahmed, H., Auffray, C., Bakke, P., Baribaud, F., Bel, E.H., Bigler, J., Bisgaard, H., Boedigheimer, M.J., Bønnelykke, K., Brandsma, J., Brinkman, P., Bucchioni, E., Burg, D., Bush, A., Caruso, M., Chaiboonchoe, A., Chanez, P., Compton, C.H., Corfield, J., D'Amico, A., Dahlén, B., Dahlén, S.E., De Meulder, B., Djukanovic, R., Erpenbeck, V.J., Erzen, D., Fichtner, K., Fitch, N., Fleming, L.J., Formaggio, E., Fowler, S.J., Frey, U., Gahlemann, M., Geiser, T., Goss, V., Guo, Y.-K., Hashimoto, S., Haughney, J., Hedlin, G., Hekking, P.W., Higenbottam, T., Hohlfeld, J.M., Holweg, C., Horváth, I., Howarth, P., James, A.J., Knowles, R.G., Knox, A.J., Krug, N., Lefaudeux, D., Loza, M.J., Lutter, R., Manta, A., Masefield, S., Matthews, J.G., Mazein, A., Meiser, A., Middelveld, R.J.M., Miralpeix, M., Montuschi, P., Mores, N., Murray, C.S., Musial, J., Myles, D., Pahus, L., Pandis, I., Pavlidis, S., Postle, A., Powel, P., Praticò, G., Puig Valls, M., Rao, N., Roberts, A., Roberts, G., Rowe, A., Sandström, T., Schofield, J.P.R., Seibold, W., Selby, A., Shaw, D.E., Sigmund, R., Singer, F., Skipp, P.J., Sousa, A.R., Sterk, P.J., Sun, K., Thornton, B., van Aalderen, W.M., van Geest, M., Vestbo, J., Vissing, N.H., Wagener, A.H., Wagers, S.S., Weiszhart, Z., Wheelock, C.E., Wilson, S.J., Cruz, Alvaro A., Riley, John H., Bansal, Aruna T., Ponte, Eduardo V., Souza-Machado, Adelmir, Almeida, Paula C.A., Biao-Lima, Valmar, Davis, Maggie, Bates, Stewart, Adcock, Ian M., Sterk, Peter J., and Chung, Kian Fan
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- 2020
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3. Identification and prospective stability of electronic nose (eNose)–derived inflammatory phenotypes in patients with severe asthma
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Brinkman, Paul, Wagener, Ariane H., Hekking, Pieter-Paul, Bansal, Aruna T., Maitland-van der Zee, Anke-Hilse, Wang, Yuanyue, Weda, Hans, Knobel, Hugo H., Vink, Teunis J., Rattray, Nicholas J., D'Amico, Arnaldo, Pennazza, Giorgio, Santonico, Marco, Lefaudeux, Diane, De Meulder, Bertrand, Auffray, Charles, Bakke, Per S., Caruso, Massimo, Chanez, Pascal, Chung, Kian F., Corfield, Julie, Dahlén, Sven-Erik, Djukanovic, Ratko, Geiser, Thomas, Horvath, Ildiko, Krug, Nobert, Musial, Jacek, Sun, Kai, Riley, John H., Shaw, Dominic E., Sandström, Thomas, Sousa, Ana R., Montuschi, Paolo, Fowler, Stephen J., and Sterk, Peter J.
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- 2019
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4. Low levels of endogenous anabolic androgenic steroids in females with severe asthma taking corticosteroids
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Yasinska, Valentyna, primary, Gómez, Cristina, additional, Kolmert, Johan, additional, Ericsson, Magnus, additional, Pohanka, Anton, additional, James, Anna, additional, Andersson, Lars I., additional, Sparreman-Mikus, Maria, additional, Sousa, Ana R., additional, Riley, John H., additional, Bates, Stewart, additional, Bakke, Per S., additional, Zounemat Kermani, Nazanin, additional, Caruso, Massimo, additional, Chanez, Pascal, additional, Fowler, Stephen J., additional, Geiser, Thomas, additional, Howarth, Peter H., additional, Horváth, Ildikó, additional, Krug, Norbert, additional, Montuschi, Paolo, additional, Sanak, Marek, additional, Behndig, Annelie, additional, Shaw, Dominick E., additional, Knowles, Richard G., additional, Dahlén, Barbro, additional, Maitland-van der Zee, Anke-Hilse, additional, Sterk, Peter J., additional, Djukanovic, Ratko, additional, Adcock, Ian M., additional, Fan Chung, Kian, additional, Wheelock, Craig E., additional, Dahlén, Sven-Erik, additional, and Wikström Jonsson, Eva, additional
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- 2023
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5. U-BIOPRED: evaluation of the value of a public–private partnership to industry
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Riley, John H., Erpenbeck, Veit J., Matthews, John G., Holweg, Cecile T.J., Compton, Christopher, Seibold, Wolfgang, Higenbottam, Timothy, Wagers, Scott, Rowe, Anthony, and Myles, David
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- 2018
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6. Direct Sequencing of Bacterial and P1 Artificial Chromosome-Nested Deletions for Identifying Position-Specific Single-Nucleotide Polymorphisms
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Chatterjee, Pradeep K., Yarnall, David P., Haneline, Stephen A., Godlevski, Michele M., Thornber, Simon J., Robinson, Phil S., Davies, Heather E., White, Nicola J., Riley, John H., and Shepherd, Nancy S.
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- 1999
7. Comparative Efficacy of Once-Daily Umeclidinium/Vilanterol and Tiotropium/Olodaterol Therapy in Symptomatic Chronic Obstructive Pulmonary Disease: A Randomized Study
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Feldman, Gregory J., Sousa, Ana R., Lipson, David A., Tombs, Lee, Barnes, Neil, Riley, John H., Patel, Sadhana, Naya, Ian, Compton, Chris, and Alcázar Navarrete, Bernardino
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- 2017
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8. SECURITY SECTOR REFORM IN SOUTH SUDAN: IDENTIFYING ROLES FOR PRIVATE MILITARY AND SECURITY COMPANIES
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Portada, Robert A, Riley, John H., and Gambone, Michael D.
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- 2014
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9. IL1RAP expression and the enrichment of IL‐33 activation signatures in severe neutrophilic asthma
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Badi, Yusef Eamon, primary, Salcman, Barbora, additional, Taylor, Adam, additional, Rana, Batika, additional, Kermani, Nazanin Zounemat, additional, Riley, John H., additional, Worsley, Sally, additional, Mumby, Sharon, additional, Dahlen, Sven‐Eric, additional, Cousins, David, additional, Bulfone‐Paus, Silvia, additional, Affleck, Karen, additional, Chung, Kian Fan, additional, Bates, Stewart, additional, and Adcock, Ian M., additional
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- 2022
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10. Plasma proteins elevated in severe asthma despite oral steroid use and unrelated to Type-2 inflammation
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Mikus, Maria Sparreman, Kolmert, Johan, Andersson, Lars I., Östling, Jörgen, Knowles, Richard G., Gómez, Cristina, Ericsson, Magnus, Thörngren, John Olof, Khoonsari, Payam Emami, Dahlén, Barbro, Kupczyk, Maciej, de Meulder, Bertrand, Auffray, Charles, Bakke, Per S., Beghe, Bianca, Bel, Elisabeth H., Caruso, Massimo, Chanez, Pascal, Chawes, Bo, Fowler, Stephen J., Gaga, Mina, Geiser, Thomas, Gjomarkaj, Mark, Horváth, Ildikó, Howarth, Peter H., Johnston, Sebastian L., Joos, Guy, Krug, Norbert, Montuschi, Paolo, Musial, Jacek, Niżankowska-Mogilnicka, Ewa, Olsson, Henric K., Papi, Alberto, Rabe, Klaus F., Sandström, Thomas, Shaw, Dominick E., Siafakas, Nikolaos M., Uhlén, Mathias, Riley, John H., Bates, Stewart, Middelveld, Roelinde J.M., Wheelock, Craig E., Chung, Kian Fan, Adcock, Ian M., Sterk, Peter J., Bisgaard, Hans, Bønnelykke, Klaus, Vestbo, Jørgen, Vissing, Nadja H., and Olsson, Marianne
- Abstract
Rationale Asthma phenotyping requires novel biomarker discovery. Objectives To identify plasma biomarkers associated with asthma phenotypes by application of a new proteomic panel to samples from two well-characterised cohorts of severe (SA) and mild-to-moderate (MMA) asthmatics, COPD subjects and healthy controls (HCs). Methods An antibody-based array targeting 177 proteins predominantly involved in pathways relevant to inflammation, lipid metabolism, signal transduction and extracellular matrix was applied to plasma from 525 asthmatics and HCs in the U-BIOPRED cohort, and 142 subjects with asthma and COPD from the validation cohort BIOAIR. Effects of oral corticosteroids (OCS) were determined by a 2-week, placebo-controlled OCS trial in BIOAIR, and confirmed by relation to objective OCS measures in U-BIOPRED. Results In U-BIOPRED, 110 proteins were significantly different, mostly elevated, in SA compared to MMA and HCs. 10 proteins were elevated in SA versus MMA in both U-BIOPRED and BIOAIR (alpha-1-antichymotrypsin, apolipoprotein-E, complement component 9, complement factor I, macrophage inflammatory protein-3, interleukin-6, sphingomyelin phosphodiesterase 3, TNF receptor superfamily member 11a, transforming growth factor-β and glutathione S-transferase). OCS treatment decreased most proteins, yet differences between SA and MMA remained following correction for OCS use. Consensus clustering of U-BIOPRED protein data yielded six clusters associated with asthma control, quality of life, blood neutrophils, high-sensitivity C-reactive protein and body mass index, but not Type-2 inflammatory biomarkers. The mast cell specific enzyme carboxypeptidase A3 was one major contributor to cluster differentiation. Conclusions The plasma proteomic panel revealed previously unexplored yet potentially useful Type-2independent biomarkers and validated several proteins with established involvement in the pathophysiology of SA.
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- 2022
11. IL1RAP expression and the enrichment of IL‐33 activation signatures in severe neutrophilic asthma.
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Badi, Yusef Eamon, Salcman, Barbora, Taylor, Adam, Rana, Batika, Kermani, Nazanin Zounemat, Riley, John H., Worsley, Sally, Mumby, Sharon, Dahlen, Sven‐Eric, Cousins, David, Bulfone‐Paus, Silvia, Affleck, Karen, Chung, Kian Fan, Bates, Stewart, and Adcock, Ian M.
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GENE expression ,INTERLEUKIN-33 ,REGULATORY T cells ,ASTHMA ,INNATE lymphoid cells - Abstract
Background: Interleukin (IL)‐33 is an upstream regulator of type 2 (T2) eosinophilic inflammation and has been proposed as a key driver of some asthma phenotypes. Objective: To derive gene signatures from in vitro studies of IL‐33‐stimulated cells and use these to determine IL‐33‐associated enrichment patterns in asthma. Methods: Signatures downstream of IL‐33 stimulation were derived from our in vitro study of human mast cells and from public datasets of in vitro stimulated human basophils, type 2 innate lymphoid cells (ILC2), regulatory T cells (Treg) and endothelial cells. Gene Set Variation Analysis (GSVA) was used to probe U‐BIOPRED and ADEPT sputum transcriptomics to determine enrichment scores (ES) for each signature according to asthma severity, sputum granulocyte status and previously defined molecular phenotypes. Results: IL‐33‐activated gene signatures were cell‐specific with little gene overlap. Individual signatures, however, were associated with similar signalling pathways (TNF, NF‐κB, IL‐17 and JAK/STAT signalling) and immune cell differentiation pathways (Th17, Th1 and Th2 differentiation). ES for IL‐33‐activated gene signatures were significantly enriched in asthmatic sputum, particularly in patients with neutrophilic and mixed granulocytic phenotypes. IL‐33 mRNA expression was not elevated in asthma whereas the expression of mRNA for IL1RL1, the IL‐33 receptor, was up‐regulated in the sputum of severe eosinophilic asthma. The mRNA expression for IL1RAP, the IL1RL1 co‐receptor, was greatest in severe neutrophilic and mixed granulocytic asthma. Conclusions: IL‐33‐activated gene signatures are elevated in neutrophilic and mixed granulocytic asthma corresponding with IL1RAP co‐receptor expression. This suggests incorporating T2‐low asthma in anti‐IL‐33 trials. [ABSTRACT FROM AUTHOR]
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- 2023
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12. Population Pharmacokinetics and Pharmacodynamics of GSK961081 (Batefenterol), a Muscarinic Antagonist and β2-Agonist, in Moderate-to-Severe COPD Patients: Substudy of a Randomized Trial
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Ambery, Claire L., Wielders, Pascal, Ludwig-Sengpiel, Andrea, Chan, Robert, and Riley, John H.
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- 2015
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13. Mapping atopic dermatitis and anti–IL-22 response signatures to type 2–low severe neutrophilic asthma
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Badi, Yusef Eamon, primary, Pavel, Ana B., additional, Pavlidis, Stelios, additional, Riley, John H., additional, Bates, Stewart, additional, Kermani, Nazanin Zounemat, additional, Knowles, Richard, additional, Kolmert, Johan, additional, Wheelock, Craig E., additional, Worsley, Sally, additional, Uddin, Mohib, additional, Alving, Kjell, additional, Bakke, Per S., additional, Behndig, Annelie, additional, Caruso, Massimo, additional, Chanez, Pascal, additional, Fleming, Louise J., additional, Fowler, Stephen J., additional, Frey, Urs, additional, Howarth, Peter, additional, Horváth, Ildikó, additional, Krug, Norbert, additional, Maitland-van der Zee, Anke H., additional, Montuschi, Paolo, additional, Roberts, Graham, additional, Sanak, Marek, additional, Shaw, Dominick E., additional, Singer, Florian, additional, Sterk, Peter J., additional, Djukanovic, Ratko, additional, Dahlen, Sven-Eric, additional, Guo, Yi-Ke, additional, Chung, Kian Fan, additional, Guttman-Yassky, Emma, additional, and Adcock, Ian M., additional
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- 2022
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14. The Shot Made Round (Across) the Table (Maybe)
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Riley,, John H.
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- 2008
15. Reported Pneumonia in Patients With COPD: Findings From the INSPIRE Study
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Calverley, Peter M.A., Stockley, Robert A., Seemungal, Terence A.R., Hagan, Gerry, Willits, Lisa R., Riley, John H., and Wedzicha, Jadwiga A.
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- 2011
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16. A multi-omics approach to delineate sputum microbiome-associated asthma inflammatory phenotypes
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Abdel-Aziz, Mahmoud I., primary, Vijverberg, Susanne J.H., additional, Neerincx, Anne H., additional, Brinkman, Paul, additional, Wagener, Ariane H., additional, Riley, John H., additional, Sousa, Ana R., additional, Bates, Stewart, additional, Wagers, Scott S., additional, De Meulder, Bertrand, additional, Auffray, Charles, additional, Wheelock, Åsa M., additional, Bansal, Aruna T., additional, Caruso, Massimo, additional, Chanez, Pascal, additional, Uddin, Mohib, additional, Corfield, Julie, additional, Horvath, Ildiko, additional, Krug, Norbert, additional, Musial, Jacek, additional, Sun, Kai, additional, Shaw, Dominick E., additional, Sandström, Thomas, additional, Montuschi, Paolo, additional, Fowler, Stephen J., additional, Lutter, René, additional, Djukanovic, Ratko, additional, Howarth, Peter, additional, Skipp, Paul, additional, Sanak, Marek, additional, Adcock, Ian M., additional, Chung, Kian Fan, additional, Sterk, Peter J., additional, Kraneveld, Aletta D., additional, and Maitland-van der Zee, Anke H., additional
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- 2021
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17. Urinary metabotype of severe asthma evidences decreased carnitine metabolism independent of oral corticosteroid treatment in the U-BIOPRED study
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Reinke, Stacey N., primary, Naz, Shama, additional, Chaleckis, Romanas, additional, Gallart-Ayala, Hector, additional, Kolmert, Johan, additional, Kermani, Nazanin Z., additional, Tiotiu, Angelica, additional, Broadhurst, David I., additional, Lundqvist, Anders, additional, Olsson, Henric, additional, Ström, Marika, additional, Wheelock, Åsa M., additional, Gómez, Cristina, additional, Ericsson, Magnus, additional, Sousa, Ana R., additional, Riley, John H., additional, Bates, Stewart, additional, Scholfield, James, additional, Loza, Matthew, additional, Baribaud, Frédéric, additional, Bakke, Per S., additional, Caruso, Massimo, additional, Chanez, Pascal, additional, Fowler, Stephen J., additional, Geiser, Thomas, additional, Howarth, Peter, additional, Horváth, Ildikó, additional, Krug, Norbert, additional, Montuschi, Paolo, additional, Behndig, Annelie, additional, Singer, Florian, additional, Musial, Jacek, additional, Shaw, Dominick E., additional, Dahlén, Barbro, additional, Hu, Sile, additional, Lasky-Su, Jessica, additional, Sterk, Peter J., additional, Chung, Kian Fan, additional, Djukanovic, Ratko, additional, Dahlén, Sven-Erik, additional, Adcock, Ian M., additional, and Wheelock, Craig E., additional
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- 2021
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18. Plasma proteins elevated in severe asthma despite oral steroid use and unrelated to Type-2 inflammation
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Sparreman Mikus, Maria, primary, Kolmert, Johan, additional, Andersson, Lars I., additional, Östling, Jörgen, additional, Knowles, Richard G., additional, Gómez, Cristina, additional, Ericsson, Magnus, additional, Thörngren, John-Olof, additional, Emami Khoonsari, Payam, additional, Dahlén, Barbro, additional, Kupczyk, Maciej, additional, De Meulder, Bertrand, additional, Auffray, Charles, additional, Bakke, Per S., additional, Beghe, Bianca, additional, Bel, Elisabeth H., additional, Caruso, Massimo, additional, Chanez, Pascal, additional, Chawes, Bo, additional, Fowler, Stephen J., additional, Gaga, Mina, additional, Geiser, Thomas, additional, Gjomarkaj, Mark, additional, Horváth, Ildikó, additional, Howarth, Peter H., additional, Johnston, Sebastian L., additional, Joos, Guy, additional, Krug, Norbert, additional, Montuschi, Paolo, additional, Musial, Jacek, additional, Niżankowska-Mogilnicka, Ewa, additional, Olsson, Henric K., additional, Papi, Alberto, additional, Rabe, Klaus F., additional, Sandström, Thomas, additional, Shaw, Dominick E., additional, Siafakas, Nikolaos M., additional, Uhlén, Mathias, additional, Riley, John H., additional, Bates, Stewart, additional, Middelveld, Roelinde J.M., additional, Wheelock, Craig E., additional, Chung, Kian Fan, additional, Adcock, Ian M., additional, Sterk, Peter J., additional, Djukanovic, Ratko, additional, Nilsson, Peter, additional, Dahlén, Sven-Erik, additional, and James, Anna, additional
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- 2021
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19. Organization of the Human Immunoglobulin Heavy-Chain Locus
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Matsuda, Fumihiko, Shin, Euy Kyun, Nagaoka, Hitoshi, Matsumura, Ryusuke, Haino, Makoto, Fukita, Yosho, Takaishi, Shigeo, Imai, Takashi, Riley, John H., Anand, Rakesh, Soeda, Eiichi, Honjo, Tasuku, Gergely, János, editor, Benczúr, M., editor, Erdei, Anna, editor, Falus, A., editor, Füst, Gy., editor, Medgyesi, G., editor, Petrányi, Gy., editor, and Rajnavölgyi, Éva, editor
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- 1993
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20. Genetic control of gene expression at novel and established chronic obstructive pulmonary disease loci
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Castaldi, Peter J., Cho, Michael H., Zhou, Xiaobo, Qiu, Weiliang, Mcgeachie, Michael, Celli, Bartolome, Bakke, Per, Gulsvik, Amund, Lomas, David A., Crapo, James D., Beaty, Terri H., Rennard, Stephen, Harshfield, Benjamin, Lange, Christoph, Singh, Dave, Tal-Singer, Ruth, Riley, John H., Quackenbush, John, Raby, Benjamin A., Carey, Vincent J., Silverman, Edwin K., and Hersh, Craig P.
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- 2015
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21. Urinary Leukotriene E4 and Prostaglandin D2 Metabolites Increase in Adult and Childhood Severe Asthma Characterized by Type-2 Inflammation
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Kolmert, Johan, Balgoma, David, Bood, Johan, Konradsen, Jon R., Ericsson, Magnus, James, Anna, Mikus, Maria, Sousa, Ana R., Riley, John H., Bates, Stewart, Bakke, Per S., Pandis, Ioannis, Caruso, Massimo, Chanez, Pascal, Fowler, Stephen J., Geiser, Thomas, Howarth, Peter, Krug, Norbert, Montuschi, Paolo, Sanak, Marek, Behndig, Annelie, Shaw, Dominick E, Knowles, Richard G., Alving, Kjell, Hedlin, Gunilla, Chung, Kian Fan, Adcock, Ian M., Sterk, Peter J., Djukanovic, Ratko, Wheelock, Craig E., and U-BIOPRED Study Group
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Pulmonary and Respiratory Medicine ,lipids (amino acids, peptides, and proteins) ,Critical Care and Intensive Care Medicine ,respiratory tract diseases - Abstract
Rationale: New approaches are needed to guide personalized treatment of asthma.Objective: To test if urinary eicosanoid metabolites can direct asthma phenotyping.Methods: Urinary metabolites of prostaglandins (PG), cysteinyl-leukotrienes (LT) and isoprostanes were quantified in the Unbiased Biomarkers for the Prediction of Respiratory Diseases Outcomes (U-BIOPRED) study including 86 adults with mild-to-moderate asthma (MMA), 411 with severe asthma (SA), and 100 healthy controls (HC). Validation was performed in 302 SA subjects followed-up after 12-18 months, and externally in 95 adolescents with asthma.Measurement and Main Results: Metabolite levels in HC were unrelated to age, BMI and sex, except for the PGE2-pathway. Eicosanoid levels were generally greater in MMA relative to HC, with further elevations in SA, except for PGE2-metabolites in males, which were the same or lower in non-smoking asthmatics as in HC. Metabolite levels were unchanged in asthmatics adherent to oral corticosteroid treatment as documented by urinary prednisolone detection, whereas SA treated with omalizumab had lower levels of LTE4 and the PGD2 metabolite 2,3-dinor-11?-PGF2?. High levels of LTE4 and PGD2-metabolites were associated with lower lung-function, and increased levels of exhaled nitric oxide and eosinophil markers in blood, sputum and urine in U-BIOPRED and in adolescents with asthma. These type-2 (T2) asthma associations were reproduced in the follow-up visit of the U-BIOPRED study, and found to be as sensitive to detect T2 inflammation as the established biomarkers. Conclusions: Monitoring of urinary eicosanoids can identify T2 asthma and introduces a new non-invasive approach for molecular phenotyping of adult and adolescent asthma.
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- 2021
22. Lessons from ECLIPSE: a review of COPD biomarkers
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Faner, Rosa, Tal-Singer, Ruth, Riley, John H, Celli, Bartolomé, Vestbo, Jørgen, MacNee, William, Bakke, Per, Calverley, Peter M A, Coxson, Harvey, Crim, Courtney, Edwards, Lisa D, Locantore, Nick, Lomas, David A, Miller, Bruce E, Rennard, Stephen I, Wouters, Emiel F M, Yates, Julie C, Silverman, Edwin K, and Agusti, Alvar
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- 2014
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23. Probing S4 and S5 segment proximity in mammalian hyperpolarization-activated HCN channels by disulfide bridging and Cd2+ coordination
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Bell, Damian C., Turbendian, Harma K., Valley, Matthew T., Zhou, Lei, Riley, John H., Siegelbaum, Steven A., and Tibbs, Gareth R.
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- 2009
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24. Sputum microbiome profiles identify severe asthma phenotypes of relative stability at 12 to 18 months
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Abdel-Aziz, Mahmoud I., primary, Brinkman, Paul, additional, Vijverberg, Susanne J.H., additional, Neerincx, Anne H., additional, Riley, John H., additional, Bates, Stewart, additional, Hashimoto, Simone, additional, Kermani, Nazanin Zounemat, additional, Chung, Kian Fan, additional, Djukanovic, Ratko, additional, Dahlén, Sven-Erik, additional, Adcock, Ian M., additional, Howarth, Peter H., additional, Sterk, Peter J., additional, Kraneveld, Aletta D., additional, and Maitland-van der Zee, Anke H., additional
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- 2021
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25. eNose breath prints as a surrogate biomarker for classifying patients with asthma by atopy
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Abdel-Aziz, Mahmoud I., primary, Brinkman, Paul, additional, Vijverberg, Susanne J.H., additional, Neerincx, Anne H., additional, de Vries, Rianne, additional, Dagelet, Yennece W.F., additional, Riley, John H., additional, Hashimoto, Simone, additional, Montuschi, Paolo, additional, Chung, Kian Fan, additional, Djukanovic, Ratko, additional, Fleming, Louise J., additional, Murray, Clare S., additional, Frey, Urs, additional, Bush, Andrew, additional, Singer, Florian, additional, Hedlin, Gunilla, additional, Roberts, Graham, additional, Dahlén, Sven-Erik, additional, Adcock, Ian M., additional, Fowler, Stephen J., additional, Knipping, Karen, additional, Sterk, Peter J., additional, Kraneveld, Aletta D., additional, and Maitland-van der Zee, Anke H., additional
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- 2020
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26. Gritty sets and functions
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Riley, John H., primary
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- 2020
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27. Changes in local S4 environment provide a voltage-sensing mechanism for mammalian hyperpolarization--activated HCN channels
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Bell, Damian C., Yao, Huan, Saenger, Renee C., Riley, John H., and Siegelbaum, Steven A.
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Ion channels -- Research ,Biological sciences ,Health - Abstract
The positively charged S4 transmembrane segment of voltage-gated channels is thought to function as the voltage sensor by moving charge through the membrane electric field in response to depolarization. Here we studied S4 movements in the mammalian HCN pacemaker channels. Unlike most voltage-gated channel family members that are activated by depolarization, HCN channels are activated by hyperpolarization. We determined the reactivity of the charged sulfhydryl-modifying reagent, MTSET, with substituted cysteine (Cys) residues along the HCN1 S4 segment. Using an HCN1 channel engineered to be MTS resistant except for the chosen S4 Cys substitution, we determined the reactivity, of 12 S4 residues to external or internal MTSET application in either the closed or open state of the channel. Cys substitutions in the N[H.sub.2]-terminal half of S4 only reacted with external MTSET; the rates of reactivity were rapid, regardless of whether the channel was open or closed. In contrast, Cys substitutions in the COOH-terminal half of S4 selectively reacted with internal MTSET when the channel was open. In the open state, the boundary between externally and internally accessible residues was remarkably narrow (~3 residues). This suggests that S4 lies in a water-filled gating canal with a very narrow barrier between the external and internal solutions, similar to depolarization-gated channels. However, the pattern of reactivity is incompatible with either classical gating models, which postulate a large translational or rotational movement of S4 within a gating canal, or with a recent model in which S4 forms a peripheral voltage-sensing paddle (with S3b) that moves within the lipid bilayer (the KvAP model). Rather, we suggest that voltage sensing is due to a rearrangement in transmembrane segments surrounding S4, leading to a collapse of an internal gating canal upon channel closure that alters the shape of the membrane field around a relatively static S4 segment. KEY WORDS: voltage-gated [K.sup.+] channels * HCN1 channel * cysteine * sulfhydryl reagents * ion channel gating
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- 2004
28. Genome-Wide Association Analysis of Blood Biomarkers in Chronic Obstructive Pulmonary Disease
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Kim, Deog Kyeom, Cho, Michael H., Hersh, Craig P., Lomas, David A., Miller, Bruce E., Kong, Xiangyang, Bakke, Per, Gulsvik, Amund, Agustí, Alvar, Wouters, Emiel, Celli, Bartolome, Coxson, Harvey, Vestbo, Jørgen, MacNee, William, Yates, Julie C., Rennard, Stephen, Litonjua, Augusto, Qiu, Weiliang, Beaty, Terri H., Crapo, James D., Riley, John H., Tal-Singer, Ruth, and Silverman, Edwin K.
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- 2012
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29. Induced sputum genes associated with spirometric and radiological disease severity in COPD ex-smokers
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Singh, Dave, Fox, Steven M, Tal-Singer, Ruth, Plumb, Jonathan, Bates, Stewart, Broad, Peter, Riley, John H, and Celli, Bartolome
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- 2011
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30. Severe asthma and eligibility for biologics in a Brazilian cohort
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Marques Mello, Luane, primary, Viana, Karynna P., additional, Moraes dos Santos, Felipe, additional, Saturnino, Luciana T. M., additional, Kormann, Michelle L., additional, Lazaridis, Evelyn, additional, Torreão, Cinthia D., additional, Soares, Claudia R., additional, Abreu, Gabriela A., additional, Lima, Valmar Bião de, additional, Pinheiro, Gabriela P., additional, Lima-Matos, Aline, additional, Ponte, Eduardo Vieira, additional, Mohan, Divya, additional, Riley, John H., additional, and Cruz, Alvaro A., additional
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- 2020
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31. Asthma similarities across ProAR (Brazil) and U-BIOPRED (Europe) adult cohorts of contrasting locations, ethnicity and socioeconomic status
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Cruz, Alvaro A., primary, Riley, John H., additional, Bansal, Aruna T., additional, Ponte, Eduardo V., additional, Souza-Machado, Adelmir, additional, Almeida, Paula C.A., additional, Biao-Lima, Valmar, additional, Davis, Maggie, additional, Bates, Stewart, additional, Adcock, Ian M., additional, Sterk, Peter J., additional, Chung, Kian Fan, additional, Alcantara-Neves, N., additional, Almeida, P.C.A., additional, Amorim, L., additional, Araujo, M.I., additional, Barnes, K.C., additional, Barreto, M.L., additional, Belitardo, E., additional, Bião-Lima, V., additional, Cardoso, L., additional, Camargos, P.A., additional, Chatkin, J.M., additional, Costa, R.S., additional, Coelho, A.C.C., additional, Cooper, P.J., additional, Cruz, A.A., additional, Cruz, C.S., additional, Cunha, J., additional, de Jesus, J.V., additional, Fernandes, J., additional, Franco, R.A., additional, Gomes-Filho, I., additional, Lima-Matos, A., additional, Figueiredo, C.A., additional, Lessa, M.A., additional, Lins, L., additional, Mello, L.M., additional, Moura-Santos, P., additional, Muniz, I.S., additional, Paixao-Araujo, I., additional, Pinheiro, G.P., additional, Ponte, E.V., additional, Rodrigues, L.C., additional, Santana, C.V.N., additional, Santos-Lima, G., additional, Souza, T.M.O., additional, Souza-Machado, A., additional, Souza-Machado, C., additional, Stelmach, R., additional, Vasquez, V.S., additional, Adcock, I.M., additional, Ahmed, H., additional, Auffray, C., additional, Bakke, P., additional, Baribaud, F., additional, Bel, E.H., additional, Bigler, J., additional, Bisgaard, H., additional, Boedigheimer, M.J., additional, Bønnelykke, K., additional, Brandsma, J., additional, Brinkman, P., additional, Bucchioni, E., additional, Burg, D., additional, Bush, A., additional, Caruso, M., additional, Chaiboonchoe, A., additional, Chanez, P., additional, Compton, C.H., additional, Corfield, J., additional, D'Amico, A., additional, Dahlén, B., additional, Dahlén, S.E., additional, De Meulder, B., additional, Djukanovic, R., additional, Erpenbeck, V.J., additional, Erzen, D., additional, Fichtner, K., additional, Fitch, N., additional, Fleming, L.J., additional, Formaggio, E., additional, Fowler, S.J., additional, Frey, U., additional, Gahlemann, M., additional, Geiser, T., additional, Goss, V., additional, Guo, Y.-K., additional, Hashimoto, S., additional, Haughney, J., additional, Hedlin, G., additional, Hekking, P.W., additional, Higenbottam, T., additional, Hohlfeld, J.M., additional, Holweg, C., additional, Horváth, I., additional, Howarth, P., additional, James, A.J., additional, Knowles, R.G., additional, Knox, A.J., additional, Krug, N., additional, Lefaudeux, D., additional, Loza, M.J., additional, Lutter, R., additional, Manta, A., additional, Masefield, S., additional, Matthews, J.G., additional, Mazein, A., additional, Meiser, A., additional, Middelveld, R.J.M., additional, Miralpeix, M., additional, Montuschi, P., additional, Mores, N., additional, Murray, C.S., additional, Musial, J., additional, Myles, D., additional, Pahus, L., additional, Pandis, I., additional, Pavlidis, S., additional, Postle, A., additional, Powel, P., additional, Praticò, G., additional, Puig Valls, M., additional, Rao, N., additional, Roberts, A., additional, Roberts, G., additional, Rowe, A., additional, Sandström, T., additional, Schofield, J.P.R., additional, Seibold, W., additional, Selby, A., additional, Shaw, D.E., additional, Sigmund, R., additional, Singer, F., additional, Skipp, P.J., additional, Sousa, A.R., additional, Sterk, P.J., additional, Sun, K., additional, Thornton, B., additional, van Aalderen, W.M., additional, van Geest, M., additional, Vestbo, J., additional, Vissing, N.H., additional, Wagener, A.H., additional, Wagers, S.S., additional, Weiszhart, Z., additional, Wheelock, C.E., additional, and Wilson, S.J., additional
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- 2020
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32. Treatable traits in the European U-BIOPRED adult asthma cohorts
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Simpson, Andrew J., Hekking, Pieter-Paul, Shaw, Dominick E., Fleming, Louise J., Roberts, Graham, Riley, John H., Bates, Stewart, Sousa, Ana R., Bansal, Aruna T., Pandis, Ioannis, Sun, Kai, Bakke, Per S., Caruso, Massimo, Dahlén, Barbro, Dahlén, Sven-Erik, Horvath, Ildiko, Krug, Norbert, Montuschi, Paolo, Sandström, Thomas, Singer, Florian, Adcock, Ian M., Wagers, Scott S., Djukanovic, Ratko, Chung, Kian Fan, Sterk, Peter J., and Fowler, Stephen J.
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Respiratory Medicine and Allergy ,610 Medicine & health ,Lungmedicin och allergi - Published
- 2019
33. Epithelial dysregulation in obese severe asthmatics with gastro-oesophageal reflux
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Perotin, Jeanne-Marie, Schofield, James PR, Wilson, Susan J, Ward, Jonathan, Brandsma, Joost, Strazzeri, Fabio, Bansal, Aruna, Yang, Xian, Rowe, Anthony, Corfield, Julie, Lutter, Rene, Shaw, Dominick E, Bakke, Per S, Caruso, Massimo, Dahlen, Barbro, Fowler, Stephen J, Horvath, Ildiko, Howarth, Peter, Krug, Norbert, Montuschi, Paolo, Sanak, Marek, Sandstrom, Thomas, Sun, Kai, Pandis, Ioannis, Auffray, Charles, De Meulder, Bertrand, Lefaudeux, Diane, Riley, John H, Sousa, Ana R, Dahlen, Sven-Erik, Adcock, Ian M, Chung, Kian Fan, Sterk, Peter J, Skipp, Paul J, Collins, Jane E, Davies, Donna E, Djukanovic, Ratko, Adcock, IM, Ahmed, H, Auffray, C, Bakke, P, Banssal, AT, Baribaud, F, Bates, S, Bel, EH, Bigler, J, Bisgaard, H, Boedigheimer, MJ, Bonnelykke, K, Brandsma, J, Brinkman, P, Bucchioni, E, Burg, D, Bush, A, Caruso, M, Chaiboonchoe, A, Chanez, P, Chung, KF, Compton, CH, Corfield, J, D'Amico, A, Dahlen, SE, De Meulder, B, Djukanovic, R, Erpenbeck, VJ, Erzen, D, Fichtner, K, Fitch, N, Fleming, LJ, Formaggio, E, Fowler, SJ, Frey, U, Gahlemann, M, Geiser, T, Guo, Y, Hashimoto, S, Haughney, J, Hedlin, G, Hekking, PW, Higenbottam, T, Hohlfeld, JM, Holweg, C, Horvath, I, Howarth, P, James, AJ, Knowles, R, Knox, AJ, Krug, N, Lefaudeux, D, Loza, MJ, Lutter, R, Manta, A, Masefield, S, Matthews, JG, Mazein, A, Meiser, A, Middelveld, RJM, Miralpeix, M, Montuschi, P, Mores, N, Murray, CS, Musial, J, Myles, D, Pahus, L, Pandis, I, Pavlidis, S, Powell, P, Pratico, G, Puig Valls, M, Rao, N, Riley, J, Roberts, A, Roberts, G., Rowe, A, Sandstrom, T, Seibold, W, Selby, A, Shaw, DE, Sigmund, R, Singer, F, Skipp, PJ, Sousa, AR, Sterk, PJ, Sun, K, Thornton, B, van Aalderen, WM, van Geest, M, Vestbo, J, Vissing, NH, Wagener, AH, Wagers, SS, Weiszhart, Z, Wheelock, CE, Wilson, SJ, Aliprantis, Antonios, Allen, David, Alving, Kjell, Badorrek, P, Balgoma, David, Ballereau, S, Barber, Clair, Batuwitage, Manohara Kanangana, Bautmans, An, Bedding, A, Behndig, AF, Beleta, Jorge, Berglind, A, Berton, A, Bochenek, G, Braun, A, Campagna, D, Carayannopoulos, L, Casaulta, C, Chaleckis, Romanas, Dahlen, B, Davison, T, De Alba, J, De Lepeleire, I, Dekker, T, Delin, I, Dennison, P, Dijkhuis, A, Dodson, P, Dyson, K, Edwards, J, El Hadjam, L, Emma, R, Ericsson, M, Faulenbach, C, Flood, Breda, Galffy, G, Gallart, H, Garissi, D, Gent, J., Gerhardsson de Verdier, M, Gibeon, D, Gomez, Cristina, Gove, K, Guillmant-Farry, E, Henriksson, E, Hewitt, L, Hoda, U, Hu, Richard, Hu, S, Hu, X, Jeyasingham, E, Johnson, K, Jullian, N, Kamphuis, J, Kennington, EJ, Kerry, D, Kerry, G, Klueglich, M, Knobel, H, Kolmert, Johan, Konradsen, JR, Kots, M, Kretsos, Kosmas, Krueger, L, Kuo, S, Kupczyk, M, Lambrecht, Bart, Lantz, A-S, Larminie, Christopher, Larsson, LX, Latzin, P, Lazarinis, N, Lemonnier, N, Lone-Latif, S, Lowe, LA, Marouzet, L, Martin, J, Mathon, C, McEvoy, L, Meah, S, Menzies-Gow, A, Metcalf, L, Mikus, M, Monk, P, Naz, S, Nething, K, Nicholas, B, Nihlen, U, Nilsson, Peter, Niven, R, Nordlund, B, Nsubuga, S, Ostling, J, Pacino, A, Palkonen, S, Pellet, J, Pennazza, G, Petren, A, Pink, S, Pison, C, Postle, A, Rahman-Amin, M, Ravanetti, L, Ray, E, Reinke, S, Reynolds, L, Riemann, K, Robberechts, Martine, Rocha, JP, Rossios, C, Russell, K, Rutgers, M, Santini, G, Santoninco, M, Saqi, M, Schoelch, C, Schofield, JPR, Scott, S, Sehgal, N, Sjodin, M, Smids, B, Smith, Caroline, Smith, J, Smith, KM, Soderman, P, Sogbessan, A, Spycher, F, Staykova, D, Stephan, S, Stokholm, J, Strandberg, K, Sunther, M, Szentkereszty, M, Tamasi, L, Tariq, K, Thorngren, J-O, Thorsen, Jonathan, Valente, S, van de Pol, Marianne, van Drunen, CM, Van Eyll, J, Versnel, J, Vink, A, von Garnier, C, Vyas, A, Wald, F, Walker, S, Ward, J, Wetzel, K, Wiegman, C, Williams, S, Yang, X, Yeyasingham, E, Yu, W, Zetterquist, W, Zolkipli, Z, Zwinderman, AH, Prins, J-B, Visintin, L, Evans, H, Puhl, M, Buzermaniene, L, Hudson, V, Bond, L, de Boer, P, Widdershoven, G, Supple, D, Hamerlijnck, D, Negus, J, Sergison, L, Onstein, S, MacNee, W, Bernardini, R, Bont, Louis, Wecksell, P-A, Draper, Aleksandra, Gozzard, Neil, Commission of the European Communities, Publica, Pulmonology, AII - Inflammatory diseases, Ear, Nose and Throat, Epidemiology and Data Science, APH - Methodology, and NIHR Southampton Biomedical Research Centre
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severe asthma ,Pulmonary and Respiratory Medicine ,endotyping ,Gastrointestinal ,phenotyping ,Settore BIO/14 - FARMACOLOGIA ,[SDV]Life Sciences [q-bio] ,Respiratory System ,ROWE ,Gene Expression ,Article ,Endoscopy, Gastrointestinal ,Epithelium ,CCN Intercellular Signaling Proteins ,Patent application ,03 medical and health sciences ,0302 clinical medicine ,Shareholder ,gatroesophageal reflux ,Nothing ,Proto-Oncogene Proteins ,Medicine and Health Sciences ,Humans ,Medicine ,Obesity ,030212 general & internal medicine ,ComputingMilieux_MISCELLANEOUS ,11 Medical and Health Sciences ,U-BIOPRED Study Group ,Science & Technology ,business.industry ,U-BIOPRED ,digestive, oral, and skin physiology ,Airway inflammation ,Conflict of interest ,Biology and Life Sciences ,Endoscopy ,Asthma ,digestive system diseases ,3. Good health ,030228 respiratory system ,Spin out ,Case-Control Studies ,Law ,Honorarium ,Gastroesophageal Reflux ,business ,Life Sciences & Biomedicine - Abstract
Gastro-oesophageal reflux disease (GORD) and obesity are associated with frequent exacerbations and poor quality of life in asthmatics. Multiple mechanisms have been proposed for the effect of obesity, including modification of inflammation affecting epithelial cell proliferation and wound repair, while the role of GORD is poorly understood and proton pump inhibitor (PPI) are of variable efficacy. GORD might exert a deleterious effect by inducing vagal reflex, neuroinflammation and directly ( via microaspiration) triggering airway inflammation. Studies of reflux in animal models and human bronchial epithelial cell culture show varying impact on inflammation and airway remodelling. Footnotes This manuscript has recently been accepted for publication in the European Respiratory Journal . It is published here in its accepted form prior to copyediting and typesetting by our production team. After these production processes are complete and the authors have approved the resulting proofs, the article will move to the latest issue of the ERJ online. Please open or download the PDF to view this article. Conflict of interest: Dr PEROTIN has nothing to disclose. Conflict of interest: Dr Schofield has nothing to disclose. Conflict of interest: Dr Wilson has nothing to disclose. Conflict of interest: Dr Ward has nothing to disclose. Conflict of interest: Dr Brandsma has nothing to disclose. Conflict of interest: Dr Strazzeri has nothing to disclose. Conflict of interest: Dr Bansal has nothing to disclose. Conflict of interest: Dr Yang has nothing to disclose. Conflict of interest: Dr Rowe reports and a full time employee and shareholder of Janssen Pharmaceutical Companies of Johnson and Johnson. Conflict of interest: Miss Corfield has nothing to disclose. Conflict of interest: Dr Lutter has nothing to disclose. Conflict of interest: Prof. Shaw reports personal fees and non-financial support from AstraZeneca, personal fees from Boehringer Ingelheim, personal fees from Novartis, personal fees from Teva, personal fees from Circassia, and a grant from GSK, outside the submitted work. Conflict of interest: Dr Bakke reports personal fees from GSK, AZ, Novartis andTeva, outside the submitted work. Conflict of interest: MC have no conflict of interest to disclose. Conflict of interest: Dr Dahlen has nothing to disclose. Conflict of interest: Dr Fowler reports personal fees and non-financial support from AstraZeneca, grants and personal fees from Boehringer Ingelheim, personal fees from Novartis, personal fees from Teva, outside the submitted work. Conflict of interest: Dr Horvath reports personal fees from Astra Zeneca, Boehringer Ingelheim, Novartis, CSL, Chiesi, Roche, GSK, Berlin-Chemie and Sandoz, outside the submitted work. Conflict of interest: Dr Howarth reports personal fees from GSK, outside the submitted work. Conflict of interest: Dr Krug has nothing to disclose. Conflict of interest: Dr Montuschi has nothing to disclose. Conflict of interest: Dr Sanak has nothing to disclose. Conflict of interest: Dr Sandstrom reports other monetary support from Boehringer Ingelheim, outside the submitted work. Conflict of interest: Dr Sun has nothing to disclose. Conflict of interest: Dr Pandis has nothing to disclose. Conflict of interest: Dr Auffray reports grants from Innovative Medicine Initiative, during the conduct of the study. Conflict of interest: Dr De Meulder reports grants from Innovative Medicine Initiative, during the conduct of the study. Conflict of interest: Ms. Lefaudeux reports grants from Innovative Medicine Initiative, grants from Innovative Medicine Initiative, during the conduct of the study. Conflict of interest: Dr Riley reports and I have shares in and I am employed by GSK. Conflict of interest: Dr Sousa has nothing to disclose. Conflict of interest: Dr Dahlen has nothing to disclose. Conflict of interest: Dr Adcock reports grants from EU-IMI, during the conduct of the study. Conflict of interest: KFC has received honoraria for participating in Advisory Board meetings of GSK, AZ, BI, Teva, Novartis and Merck regarding treatments for asthma and chronic obstructive pulmonary disease and has also been renumerated for speaking engagements. Conflict of interest: Dr Sterk reports grants from Innovative Medicines Initiative, during the conduct of the study. Conflict of interest: Dr Skipp has nothing to disclose. Conflict of interest: Dr Collins reports a patent application for use of a genetically modified Drosophila line carrying one or more mammalian genes associated with a chronic respiratory disease and uses to screen the impact of such genes. Conflict of interest: Dr Davies has nothing to disclose. Conflict of interest: Dr Djukanovic reports receiving fees for lectures at symposia organised by Novartis, AstraZeneca and TEVA, consultation for TEVA and Novartis as member of advisory boards, and participation in a scientific discussion about asthma organised by GlaxoSmithKline. He is a co-founder and current consultant, and has shares in Synairgen, a University of Southampton spin out company.
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- 2019
34. Severe asthma and eligibility for biologics in a Brazilian cohort.
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Marques Mello, Luane, Viana, Karynna P., Moraes dos Santos, Felipe, Saturnino, Luciana T. M., Kormann, Michelle L., Lazaridis, Evelyn, Torreão, Cinthia D., Soares, Claudia R., Abreu, Gabriela A., Lima, Valmar Bião de, Pinheiro, Gabriela P., Lima-Matos, Aline, Ponte, Eduardo Vieira, Mohan, Divya, Riley, John H., and Cruz, Alvaro A.
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ASTHMA ,BIOTHERAPY ,WHEEZE ,BIOLOGICALS ,OMALIZUMAB - Abstract
This study aims to describe the eligibility for biologic therapies for severe asthma (SA) in a cohort of patients attending the Program for Control of Asthma (ProAR) in Bahia, Brazil. Data from SA patients (≥18 years old) attending the ProAR, that were included in a case-control study conducted from 2013 to 2015, were used to reassess patients according to a modified ERS/ATS 2014 SA criteria. Patients were then classified according to the eligibility for SA biological therapy based on current prescription labels. From 544 patients in the cohort, 531 (97.6%) were included and 172 (32.4%) were identified as SA patients according to the ERS/ATS 2014 modified criteria. Of these 172 patients, 69 (40.1%) were ineligible for any of the biologicals approved for asthma (omalizumab, mepolizumab, reslizumab and benralizumab), 60 (34.9%) patients were eligible for one of the biological therapies, and 10 (5.8%) patients were eligible for all biological therapies. More than half of patients with SA were eligible for biologic therapy in our study, but none of them received this form of treatment. Almost half of them were not eligible to any of the approved biologics, however. The variability and overlap in patients' eligibility highlight the importance of evaluating each patient individually for a more personalized treatment approach. While there is a need to increase access for some of those eligible that may really need a biologic treatment, continuous efforts are required to develop alternatives to those who are not eligible. [ABSTRACT FROM AUTHOR]
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- 2021
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35. Pharmacogenetics to Predict Drug-Related Adverse Events
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Hosford, David A., Lai, Eric H., Riley, John H., Xu, Chun-Fang, Danoff, Theodore M., and Roses, Allen D.
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- 2004
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36. The use of single nucleotide polymorphisms in the isolation of common disease genes
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Riley, John H, Allan, Claire J, Lai, Eric, and Roses, Allen
- Published
- 2000
37. Prediction of longitudinal inflammatory phenotypes using baseline sputum transcriptomics in UBIOPRED
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Zounemat Kermani, Nazanin, primary, Pavlidis, Stelios, additional, Riley, John H., additional, Chung, Fan Kian, additional, Adcock, Ian M., additional, and Guo, Yi-Ke, additional
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- 2019
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38. Is Fezakinumab, an anti-IL22 antibody, a putative novel therapy for a subset of severe asthma?
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Badi, Yusef, primary, Pavel, Ana B, additional, Riley, John H, additional, Chung, Kian F, additional, Guttman-Yassky, Emma, additional, and Adcock, Ian M, additional
- Published
- 2019
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39. Urinary Leukotriene E4 and Prostaglandin D2 Metabolites Increase in Adult and Childhood Severe Asthma Characterized by Type 2 Inflammation. A Clinical Observational Study.
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Kolmert, Johan, Gómez, Cristina, Balgoma, David, Sjödin, Marcus, Bood, Johan, Konradsen, Jon R, Ericsson, Magnus, Thörngren, John-Olof, James, Anna, Mikus, Maria, Sousa, Ana R, Riley, John H, Bates, Stewart, Bakke, Per S, Pandis, Ioannis, Caruso, Massimo, Chanez, Pascal, Fowler, Stephen J, Geiser, Thomas, and Howarth, Peter
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PROSTAGLANDINS ,RESEARCH ,ASTHMA ,INFLAMMATION ,RESEARCH methodology ,EVALUATION research ,MEDICAL cooperation ,COMPARATIVE studies ,RESEARCH funding ,LEUKOTRIENES - Abstract
Rationale: New approaches are needed to guide personalized treatment of asthma.Objectives: To test if urinary eicosanoid metabolites can direct asthma phenotyping.Methods: Urinary metabolites of prostaglandins (PGs), cysteinyl leukotrienes (CysLTs), and isoprostanes were quantified in the U-BIOPRED (Unbiased Biomarkers for the Prediction of Respiratory Diseases Outcomes) study including 86 adults with mild-to-moderate asthma (MMA), 411 with severe asthma (SA), and 100 healthy control participants. Validation was performed internally in 302 participants with SA followed up after 12-18 months and externally in 95 adolescents with asthma.Measurement and Main Results: Metabolite concentrations in healthy control participants were unrelated to age, body mass index, and sex, except for the PGE2 pathway. Eicosanoid concentrations were generally greater in participants with MMA relative to healthy control participants, with further elevations in participants with SA. However, PGE2 metabolite concentrations were either the same or lower in male nonsmokers with asthma than in healthy control participants. Metabolite concentrations were unchanged in those with asthma who adhered to oral corticosteroid treatment as documented by urinary prednisolone detection, whereas those with SA treated with omalizumab had lower concentrations of LTE4 and the PGD2 metabolite 2,3-dinor-11β-PGF2α. High concentrations of LTE4 and PGD2 metabolites were associated with lower lung function and increased amounts of exhaled nitric oxide and eosinophil markers in blood, sputum, and urine in U-BIOPRED participants and in adolescents with asthma. These type 2 (T2) asthma associations were reproduced in the follow-up visit of the U-BIOPRED study and were found to be as sensitive to detect T2 inflammation as the established biomarkers.Conclusions: Monitoring of urinary eicosanoids can identify T2 asthma and introduces a new noninvasive approach for molecular phenotyping of adult and adolescent asthma.Clinical trial registered with www.clinicaltrials.gov (NCT01976767). [ABSTRACT FROM AUTHOR]
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- 2021
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40. Gritty sets and functions
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Riley, John H.
- Abstract
We define a subset of the unit interval to be gritty if it intersects every subinterval with positive measure but does not contain any subinterval. A countable sequence of pairwise disjoint gritty sets is constructed. These are then used to construct a function which is strictly increasing but has zero derivative on a set of positive measure and a function which is unbounded on a subset of positive measure of every subinterval yet has a finite integral.
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- 2021
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41. Systematic review of the association between exercise tests and patient-reported outcomes in patients with chronic obstructive pulmonary disease
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Punekar,Yogesh Suresh, Riley,John H., Lloyd,Emily, Driessen,Maurice, and Singh,Sally
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International Journal of Chronic Obstructive Pulmonary Disease ,humanities - Abstract
Yogesh Suresh Punekar,1 John H Riley,2 Emily Lloyd,3 Maurice Driessen,2 Sally J Singh4 1Health Outcomes, GlaxoSmithKline, Uxbridge, 2MDC Global Clinical Development UK, Respiratory Research and Development, GlaxoSmithKline, Uxbridge, 3Value Evidence and Outcomes, GlaxoSmithKline, Brentford, 4Centre for Exercise and Rehabilitation Science, University Hospitals of Leicester NHS Trust, Leicester, UK Introduction: Chronic obstructive pulmonary disease (COPD) is an increasingly common cause of death worldwide. Its cardinal symptoms include breathlessness and severely reduced exercise capacity. Several patient-reported outcome (PRO) measures are used to assess health-related quality of life (HRQoL), functional performance, and breathlessness in patients with COPD. Exercise testing is employed to measure functional performance objectively, which is generally believed to impact on overall HRQoL. However, the extent to which commonly used laboratory- and field-based exercise test results correlate with PROs has not been systematically assessed. Materials and methods: A search of Embase, MedLine, and the Cochrane Library identified primary publications in English that reported data on the correlations (Pearson’s r or Spearman’s Ρ) between the outcomes of exercise tests and HRQoL and breathlessness PROs. Studies reporting on the following tests were included: 6-minute walk test (6MWT), 12MWT, incremental and endurance shuttle walk tests, incremental and endurance cycle ergometer tests, and treadmill tests. Results: Of 3,205 articles screened, 28 were deemed eligible for inclusion. The most commonly reported HRQoL PRO measure was the St George’s Respiratory Questionnaire (13 studies), and the most commonly reported breathlessness PRO measure was the Baseline Dyspnea Index (six studies). The St George’s Respiratory Questionnaire appears to correlate very weakly to moderately with the 6MWT, and breathlessness PROs appear to be moderately to strongly associated with 6MWT outcomes. Across all studies, the 6MWT was the most commonly reported exercise test. Very few publications reporting associations between other exercise tests and PRO measures were found. Conclusion: This review found evidence to support the association of 6MWT outcomes with HRQoL and breathlessness PROs. There were limited data showing correlations with the outcomes of other exercise tests. Further work is required to examine the associations between these PROs and exercise test outcomes. Keywords: exercise tests, COPD, patient-reported outcomes
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- 2017
42. Interpreting patient-reported outcomes from clinical trials in COPD: a discussion
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Jones,Paul, Rennard,Stephen, Tabberer,Maggie, Riley,John H., Vahdati-Bolouri,Mitra, and Barnes,Neil
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International Journal of Chronic Obstructive Pulmonary Disease - Abstract
Paul W Jones,1,2 Stephen Rennard,3,4 Maggie Tabberer,5 John H Riley,2 Mitra Vahdati-Bolouri,2 Neil C Barnes2,6 1Institute for Infection and Immunity, University of London, London, 2Global Respiratory Franchise, GlaxoSmithKline, Uxbridge, UK; 3Division of Pulmonary, Critical Care, Sleep and Allergy, Nebraska Medical Center, Omaha, NE, USA; 4Clinical Discovery Unit, AstraZeneca, Cambridge, 5Global R&D, GlaxoSmithKline, Uxbridge, 6William Harvey Institute, Bart’s and the London School of Medicine and Dentistry, London, UK Abstract: One of the challenges faced by the practising physician is the interpretation of patient-reported outcomes (PROs) in clinical trials and the relevance of such data to their patients. This is especially true when caring for patients with progressive diseases such as COPD. In an attempt to incorporate the patient perspective, many clinical trials now include assessments of PROs. These are formalized methods of capturing patient-centered information. Given the importance of PROs in evaluating the potential utility of an intervention for a patient with COPD, it is important that physicians are able to critically interpret (and critique) the results derived from them. Therefore, in this paper, a series of questions is posed for the practising physician to consider when reviewing the treatment effectiveness as assessed by PROs. The focus is on the St George’s Respiratory Questionnaire for worked examples, but the principles apply equally to other symptom-based questionnaires. A number of different ways of presenting PRO data are discussed, including the concept of the minimum clinically important difference, whether there is a ceiling effect to PRO results, and the strengths and weaknesses of responder analyses. Using a worked example, the value of including a placebo arm in a study is illustrated, and the influence of the study on PRO results is considered, in terms of the design, patient withdrawal, and the selection of the study population. For the practising clinician, the most important consideration is the importance of individualization of treatment (and of treatment goals). To inform such treatment, clinicians need to critically review PRO data. The hope is that the questions posed here will help to build a framework for this critical review. Keywords: patient-centered outcomes research, St George’s Respiratory Questionnaire, COPD, data interpretation, statistical
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- 2016
43. Genetic effects on treatment response of umeclidinium/vilanterol in chronic obstructive pulmonary disease
- Author
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Condreay, Lynn, Huang, Lingkang, Harris, Elizabeth, Brooks, Jean, Riley, John H., Church, Alison, and Ghosh, Soumitra
- Published
- 2016
- Full Text
- View/download PDF
44. Topological data analysis (TDA) of U-BIOPRED paediatric peripheral blood gene expression identified asthma phenotypes characterised by alternative splicing of glucocorticoid receptor (GR) mRNA
- Author
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Schofield, James P. R., primary, Bigler, Jeanette, additional, Boedigheimer, Michael, additional, Affleck, Karen, additional, Taylor, Adam, additional, Pavlidis, Stelios, additional, Riley, John H, additional, Strazzeri, Fabio, additional, Roberts, Graham, additional, Brandsma, Joost, additional, Bansal, Aruna, additional, Nicholas, Ben, additional, Xian, Yang, additional, Rowe, Anthony, additional, Corfield, Julie, additional, Wilson, Susan, additional, Ward, Jonathan, additional, Lutter, Rene, additional, Fleming, Louise, additional, Shaw, Dominick, additional, Per, Bakke, additional, Caruso, Massimo, additional, Dahlen, Sven-Erik, additional, Fowler, Stephen, additional, Hashimoto, Simone, additional, Horvath, Ildiko, additional, Howarth, Peter, additional, Krug, Norbert, additional, Montuschi, Paolo, additional, Sanak, Marek, additional, Sandstrom, Thomas, additional, Singer, Florian, additional, Sun, Kai, additional, Pandis, Ioannis, additional, Auffray, Charles, additional, de Meulder, Bertrand, additional, Lefaudeux, Diane, additional, Knowles, Richard, additional, Fitch, Neil, additional, Sousa, Ana, additional, Adcock, Ian, additional, Chung, Kian Fan, additional, Sterk, Peter, additional, Skipp, Paul, additional, and Djukanovic, Ratko, additional
- Published
- 2018
- Full Text
- View/download PDF
45. Unbiased clinical cluster analysis of patients of ProAR Asthma Cohort.
- Author
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Cruz, Alvaro A., primary, Bansal, Aruna T., additional, Ponte, Eduardo V., additional, Souza-Machado, Adelmir, additional, Almeida, Paula C., additional, Biao-Lima, Valmar, additional, Bates, Stewart, additional, and Riley, John H., additional
- Published
- 2018
- Full Text
- View/download PDF
46. Relationship between exercise endurance and static hyperinflation in a post hoc analysis of two clinical trials in patients with COPD
- Author
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Singh, Sally, primary, Maltais, François, additional, Tombs, Lee, additional, Fahy, William A, additional, Vahdati-Bolouri, Mitra, additional, Locantore, Nicholas, additional, and Riley, John H, additional
- Published
- 2018
- Full Text
- View/download PDF
47. Effects of umeclidinium/vilanterol on exercise endurance in COPD: a randomised study
- Author
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Riley, John H., primary, Kalberg, Chris J., additional, Donald, Alison, additional, Lipson, David A., additional, Shoaib, Muhammad, additional, and Tombs, Lee, additional
- Published
- 2018
- Full Text
- View/download PDF
48. THE RAIL INDUSTRY TODAY
- Author
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Riley, John H.
- Published
- 1984
49. The shot amde round (across) the table (maybe)
- Author
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Riley, John H., Jr.
- Subjects
Dynamical systems -- Tests, problems and exercises ,Circle -- Evaluation ,Geometry, Non-Euclidean -- Tests, problems and exercises ,Mathematics - Published
- 2008
50. Late Breaking Abstract - Comparison of the blood transcriptomic profiles of adults and children from the U-BIOPRED asthma study
- Author
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Affleck, Karen, primary, Taylor, Adam, additional, Riley, John H, additional, Pavlidis, Stelios, additional, Fleming, Louise, additional, Adcock, Ian, additional, Auffray, Charles, additional, Bigler, Jeanette, additional, Bisgaard, Hans, additional, Boedigheimer, Michael, additional, Bonnelykke, Klaus, additional, Bush, Andrew, additional, Chung, K Fan, additional, Djukanovic, Ratko, additional, Frey, Urs, additional, Fowler, Stephen, additional, Hashimoto, Simone, additional, Bansal, Aruna T, additional, Hedlin, Gunila, additional, Hu, Xuguang, additional, Murray, Clare, additional, Nordlund, Bjorn, additional, Shaw, Dominick, additional, Singer, Florian, additional, Sterk, Peter, additional, Sousa, Ana R, additional, Van Aalderen, Wim, additional, Wagers, Scott, additional, Yu, Wen, additional, Roberts, Graham, additional, and Bates, Stewart, additional
- Published
- 2017
- Full Text
- View/download PDF
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