76 results on '"Rie Sano"'
Search Results
2. Emergence of an erythroid cell-specific regulatory region in ABO intron 1 attributable to A- or B-antigen expression on erythrocytes in Hominoidea
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Rie Sano, Haruki Fukuda, Rieko Kubo, Takao Oishi, Takako Miyabe-Nishiwaki, Akihisa Kaneko, Haruhisa Masato, Yoichiro Takahashi, Akira Hayakawa, Shin Yazawa, and Yoshihiko Kominato
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Medicine ,Science - Abstract
Abstract A- and B-antigens are present on red blood cells (RBCs) as well as other cells and secretions in Hominoidea including humans and apes such as chimpanzees and gibbons, whereas expression of these antigens on RBCs is subtle in monkeys such as Japanese macaques. Previous studies have indicated that H-antigen expression has not completely developed on RBCs in monkeys. Such antigen expression requires the presence of H-antigen and A- or B-transferase expression in cells of erythroid lineage, although whether or not ABO gene regulation is associated with the difference of A- or B-antigen expression between Hominoidea and monkeys has not been examined. Since it has been suggested that ABO expression on human erythrocytes is dependent upon an erythroid cell-specific regulatory region or the + 5.8-kb site in intron 1, we compared the sequences of ABO intron 1 among non-human primates, and demonstrated the presence of sites orthologous to the + 5.8-kb site in chimpanzees and gibbons, and their absence in Japanese macaques. In addition, luciferase assays revealed that the former orthologues enhanced promoter activity, whereas the corresponding site in the latter did not. These results suggested that the A- or B-antigens on RBCs might be ascribed to emergence of the + 5.8-kb site or the corresponding regions in ABO through genetic evolution.
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- 2023
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3. A cell-specific regulatory region of the human ABO blood group gene regulates the neighborhood gene encoding odorant binding protein 2B
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Rie Sano, Yoichiro Takahashi, Haruki Fukuda, Megumi Harada, Akira Hayakawa, Takafumi Okawa, Rieko Kubo, Haruo Takeshita, Junichi Tsukada, and Yoshihiko Kominato
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Medicine ,Science - Abstract
Abstract The human ABO blood group system is of great importance in blood transfusion and organ transplantation. ABO transcription is known to be regulated by a constitutive promoter in a CpG island and regions for regulation of cell-specific expression such as the downstream + 22.6-kb site for epithelial cells and a site in intron 1 for erythroid cells. Here we investigated whether the + 22.6-kb site might play a role in transcriptional regulation of the gene encoding odorant binding protein 2B (OBP2B), which is located on the centromere side 43.4 kb from the + 22.6-kb site. In the gastric cancer cell line KATOIII, quantitative PCR analysis demonstrated significantly reduced amounts of OBP2B and ABO transcripts in mutant cells with biallelic deletions of the site created using the CRISPR/Cas9 system, relative to those in the wild-type cells, and Western blotting demonstrated a corresponding reduction of OBP2B protein in the mutant cells. Moreover, single-molecule fluorescence in situ hybridization assays indicated that the amounts of both transcripts were correlated in individual cells. These findings suggest that OBP2B could be co-regulated by the + 22.6-kb site of ABO.
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- 2021
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4. Histone deacetylase inhibitors suppress ACE2 and ABO simultaneously, suggesting a preventive potential against COVID-19
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Yoichiro Takahashi, Akira Hayakawa, Rie Sano, Haruki Fukuda, Megumi Harada, Rieko Kubo, Takafumi Okawa, and Yoshihiko Kominato
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Medicine ,Science - Abstract
Abstract Coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has spread worldwide as a pandemic throughout 2020. Since the virus uses angiotensin-converting enzyme 2 (ACE2) as a receptor for cellular entry, increment of ACE2 would lead to an increased risk of SARS-CoV-2 infection. At the same time, an association of the ABO blood group system with COVID-19 has also been highlighted: there is increasing evidence to suggest that non-O individuals are at higher risk of severe COVID-19 than O individuals. These findings imply that simultaneous suppression of ACE2 and ABO would be a promising approach for prevention or treatment of COVID-19. Notably, we have previously clarified that histone deacetylase inhibitors (HDACIs) are able to suppress ABO expression in vitro. Against this background, we further evaluated the effect of HDACIs on cultured epithelial cell lines, and found that HDACIs suppress both ACE2 and ABO expression simultaneously. Furthermore, the amount of ACE2 protein was shown to be decreased by one of the clinically-used HDACIs, panobinostat, which has been reported to reduce B-antigens on cell surfaces. On the basis of these findings, we conclude that panobinostat could have the potential to serve as a preventive drug against COVID-19.
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- 2021
- Full Text
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5. Fucosylated Glycans in α1-Acid Glycoprotein for Monitoring Treatment Outcomes and Prognosis of Cancer Patients.
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Shin Yazawa, Ryo Takahashi, Takehiko Yokobori, Rie Sano, Akira Mogi, Abby R Saniabadi, Hiroyuki Kuwano, and Takayuki Asao
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Medicine ,Science - Abstract
One standard treatment option for advanced-stage cancer is surgical resection of malignant tumors following by adjuvant chemotherapy and chemoradiotherapy. Additionally, neoadjuvant chemotherapy may be applied if required. During the time course of treatments, patients are generally followed by computed tomography (CT) surveillance, and by tumor marker diagnosis. However, currently, early evidence of recurrence and/or metastasis of tumors with a clinically relevant biomarker remains a major therapeutic challenge. In particular, there has been no validated biomarker for predicting treatment outcomes in therapeutic settings. Recently, we have looked at glycoforms of serum α1-acid glycoprotein (AGP) by using a crossed affinoimmunoelectrophoresis with two lectins and an anti-AGP antibody. The primary glycan structures of AGP were also analyzed by a mass spectrometer and a novel software in a large number of patients with various cancers. Accordingly, the relative abundance of α1,3fucosylated glycans in AGP (FUCAGP) was found to be significantly high in cancer patients as compared with the healthy controls. Further, strikingly elevated levels of FUCAGP were found in patients with poor prognosis but not in patients with good prognosis. In the current study, levels of FUCAGP in serum samples from various cancer patients were analyzed and 17 patients including 13 who had undergone chemotherapy were followed for several years post operation. FUCAGP level determined diligently by using a mass spectrometer was found to change along with disease prognosis as well as with responses to treatments, in particular, to various chemotherapies. Therefore, FUCAGP levels measured during following-up of the patients after operation appeared to be clinically relevant biomarker of treatment intervention.
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- 2016
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6. The malignant potential of pancreatic intraductal papillary mucinous neoplasm is reflected in expression levels of fucosylated glycans in α 1 ‐acid glycoprotein
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Norio Kubo, Shin Yazawa, Takehiko Yokobori, Rie Sano, Hidetoshi Eguchi, Shogo Kobayashi, Hirofumi Akita, Suguru Mitsufuji, Yo‐ichi Yamashita, Yosuke Nakao, Tsutomu Fujii, Tomoyuki Okumura, Kazuto Shibuya, Yui Hoshino, Suguru Yamada, Masamichi Hayashi, Mototsugu Shimokawa, and Ken Shirabe
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Hepatology ,Surgery - Published
- 2022
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7. Acute subdural hematoma caused by rupture of a mycotic aneurysm due to meningitis associated with infectious endocarditis: comparison of autopsy findings with postmortem computed tomography
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Haruki Fukuda, Akira Hayakawa, Yoichiro Takahashi, Yuka Komatsu, Miki Kawamura, Rieko Kubo, Hiroyuki Tokue, Yoshihiko Kominato, and Rie Sano
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General Medicine ,Pathology and Forensic Medicine - Published
- 2023
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8. DECREASED EXPRESSION OF BOTH A AND B BLOOD ANTIGENS IN A PATIENT WITH MYELODYSPLASTIC SYNDROME
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Reina Ishikawa, Takayuki Maruhashi, Kozue Susa, Natsumi Nishimoto, Kanae Iwahara, Hideki Goto, Osamu Ishikawa, Akira Hayakawa, Yoichiro Takahashi, Rie Sano, Yoshihiko Kominato, and Akihiko Yokohama
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- 2022
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9. Reduction of blood group A antigen on erythrocytes in a patient with myelodysplastic syndrome harboring somatic mutations in RUNX1 and GATA2
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Akira Hayakawa, Rie Sano, Yoichiro Takahashi, Takafumi Okawa, Rieko Kubo, Megumi Harada, Haruki Fukuda, Akihiko Yokohama, Hiroshi Handa, Reika Kawabata‐Iwakawa, Hatsue Tsuneyama, Junichi Tsukada, and Yoshihiko Kominato
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GATA2 Transcription Factor ,Erythrocytes ,Myelodysplastic Syndromes ,Core Binding Factor Alpha 2 Subunit ,Mutation ,Immunology ,Leukocytes, Mononuclear ,Humans ,Immunology and Allergy ,Hematology ,ABO Blood-Group System - Abstract
Reduction of blood group ABO antigens on red blood cells (RBCs) is well known in patients with leukemias, and this reduction of ABO expression is strongly associated with DNA methylation of the ABO promoter. Previously, we reported a two-nucleotide deletion in RUNX1 encoding an abnormally elongated protein lacking the trans-activation domain in a patient with myelodysplastic syndrome (MDS) showing A-antigen loss on RBCs. This prompted us to investigate the underlying mechanism responsible for A-antigen reduction on RBCs in another patient with MDS.Screening of somatic mutations was carried out using a targeted sequencing panel with genomic DNA from peripheral blood mononuclear cells from the patient and eleven MDS controls without A- or B-antigen loss. DNA methylation of the ABO promoter was examined by bisulfite genomic sequencing. Transient transfection assays were performed for functional evaluation of mutations.Screening of somatic mutations showed missense mutations in RUNX1 and GATA2 in the patient, while no mutation was found in exons of those genes in the controls. There was no significant difference in ABO promoter methylation between the patient and the controls. Transient transfection experiments into COS-7 and K562 cells suggested that the amino acid substitutions encoded by those mutations reduced or lost the trans-activation potential of the ABO expression.Considering the discrepancy between the variant frequencies of these mutations and the ratios of the RBCs with A-antigens loss, the antigen reduction might be associated with these somatic mutations and hypermethylation of the ABO promoter.
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- 2021
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10. A novel genotyping method for rapid identification of the Le gene to select patients for diagnosis with CA19-9
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Rie Sano, Takehiko Yokobori, Norifumi Harimoto, Hiroshi Saeki, Yoshihiko Kominato, Ken Shirabe, and Shin Yazawa
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Biochemistry (medical) ,Clinical Biochemistry ,General Medicine ,Biochemistry - Abstract
The antigenic determinant of CA19-9 is synthesized by the α1,3/4fucosyltransferase encoded by the Le gene in the Lewis blood group system. Accordingly, a diagnosis with CA19-9 is not appropriate forLe-negative patients who possess the Le gene-mutated le alleles homozygously.A Le gene-specific PCR was undertaken to determine c59TG by using a set of tag-sense and biotin-labeled anti-sense primers and a peptide nucleic acid-le-clamp which bound to G59 in the le alleles. Following mixing with streptavidin-coatedbluelatex beads, the PCR products were developed on a strip on which the complementary tag oligonucleotide to theLe gene-specific amplicon was immobilized.When the PCR products were developed on the strip, a clear line was rapidly observed in Le-positive but not in Le-negative individuals. In contrast, a significant number of cancer patients with Lewis-negative phenotype were found to possess CA19-9, while they were specifically genotyped asLe/-. No contradictory results were observed in cancer patients (n = 315) with respect to their Lewis genotypes and CA19-9 levels.c59TG occurred commonly in the le alleles could be specifically and rapidly identified by the present method. This method appeared to be relevant forselecting cancer patientsto bediagnosed with CA19-9.
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- 2022
11. I536T variant of RBM20 affects splicing of cardiac structural proteins that are causative for developing dilated cardiomyopathy
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Takuma Yamamoto, Rie Sano, Aya Miura, Mai Imasaka, Yoshiro Naito, Minori Nishiguchi, Kensuke Ihara, Naruhito Otani, Yoshihiko Kominato, Masaki Ohmuraya, Hidehito Kuroyanagi, and Hajime Nishio
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Cardiomyopathy, Dilated ,Mice ,RNA Splicing ,Drug Discovery ,Molecular Medicine ,Humans ,Animals ,RNA-Binding Proteins ,Ryanodine Receptor Calcium Release Channel ,Heart ,Genetics (clinical) - Abstract
Abstract RBM20 is one of the genes predisposing to dilated cardiomyopathy (DCM). Variants in the RS domain have been reported in many DCM patients, but the pathogenicity of variants within the RNA-recognition motif remains unknown. Two human patients with the I536T-RBM20 variant without an apparent DCM phenotype were identified in sudden death cohorts. A splicing reporter assay was performed, and an I538T knock-in mouse model (Rbm20I538T) was generated to determine the significance of this variant. The reporter assay demonstrated that the human I536T variant affected the TTN splicing pattern compared to wild-type. In the mouse experiments, Rbm20I538T mice showed different splicing patterns in Ttn, Ldb3, Camk2d, and Ryr2. The expressions of Casq1, Mybpc2, and Myot were upregulated in Rbm20I538T mice, but Rbm20I538T mice showed neither DCM nor cardiac dysfunction on histopathological examination and ultrasound echocardiography. The I536T-RBM20 (I538T-Rbm20) variant changes gene splicing and affects gene expression, but the splicing and expression changes in Ttn and Ca handling genes such as Casq1, Camk2d, and Ryr2 do not cause DCM morphology in the mouse model. Key messages • Two human patients with the I536T-RBM20 variant without a DCM phenotype were identified. • A splicing reporter assay demonstrated that the variant affected the TTN splicing. • Rbm20I538T mice showed neither DCM nor cardiac dysfunction. • Rbm20I538T mice showed different splicing patterns and the gene expressions.
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- 2022
12. High membrane expression of CMTM6 in hepatocellular carcinoma is associated with tumor recurrence
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Takamichi Igarashi, Tetsunari Oyama, Kouki Hoshino, Gantumur Dolgormaa, Yuki Shimoda, Kenichiro Araki, Norifumi Harimoto, Norihiro Ishii, Norio Kubo, Kei Hagiwara, Hiroshi Saeki, Takahiro Yamanaka, Mariko Tsukagoshi, Takehiko Yokobori, Ryo Muranushi, Akira Watanabe, Batbayar Chingunjav, Ken Shirabe, and Rie Sano
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Male ,0301 basic medicine ,Cancer Research ,Carcinoma, Hepatocellular ,recurrence ,CD8-Positive T-Lymphocytes ,Biology ,cytotoxic T lymphocytes ,03 medical and health sciences ,0302 clinical medicine ,Downregulation and upregulation ,Cell Line, Tumor ,Biomarkers, Tumor ,medicine ,Humans ,Cytotoxic T cell ,Proliferation Marker ,Aged ,Cell Proliferation ,Aged, 80 and over ,MARVEL Domain-Containing Proteins ,Cell Membrane ,Liver Neoplasms ,Epidemiology and Prevention ,biomarkers ,Original Articles ,hepatocellular carcinoma ,General Medicine ,Middle Aged ,medicine.disease ,digestive system diseases ,Transmembrane protein ,Up-Regulation ,Gene Expression Regulation, Neoplastic ,CTL ,030104 developmental biology ,Oncology ,Cell culture ,030220 oncology & carcinogenesis ,Hepatocellular carcinoma ,immunohistochemistry ,Cancer research ,Immunohistochemistry ,Female ,Original Article ,Neoplasm Recurrence, Local ,Myelin Proteins ,T-Lymphocytes, Cytotoxic - Abstract
CKLF‐like MARVEL transmembrane domain–containing protein 6 (CMTM6) maintains membrane PD‐L1 expression by controlling its endosomal recycling. However, in patients with hepatocellular carcinoma (HCC), the correlation among CMTM6, B7 family ligands, and CD8‐positive cytotoxic T lymphocytes (CTLs), and the molecular function of CMTM6 in HCC have not been established. We performed immunohistochemistry to evaluate the relationships among CMTM6 expression, clinicopathological factors, B7 family ligands expression, and CTL infiltration in HCC samples. Moreover, we established CMTM6‐knockout human HCC cell lines to evaluate the function of human CMTM6 in immune regulation and tumor viability. CMTM6 expression was positively associated with membrane B7 family ligands expression and CTL infiltration in HCC samples. High CMTM6 expression in HCC tissues was associated with the expression of the proliferation marker Ki‐67 and shorter recurrence‐free survival. In vitro analysis showed the downregulation of membrane B7 family ligands and proliferation potency in the CMTM6‐knockout human HCC cell line. High membrane CMTM6 expression was associated with tumor recurrence and proliferation via the regulation of membranous B7 family ligands expression. Thus, CMTM6 might be a biomarker to predict the risk of HCC recurrence and a therapeutic target to suppress tumor growth and increase CTL activity., CMTM6 expression was positively associated with B7 family ligand expression and cytotoxic T lymphocyte (CTL) infiltration in hepatocellular carcinoma (HCC) samples. The CMTM6‐knockout human HCC cell line showed the downregulation of membrane B7 family ligands expression and proliferation potency. High membrane CMTM6 expression was associated with tumor recurrence and proliferation via the regulation of membranous B7 family expression.
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- 2021
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13. Superimposed CT imaging using fusion function to visualize the relationship between the knife and the wound path in a stabbing victim
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Akira Hayakawa, Takafumi Okawa, Haruki Fukuda, Rie Sano, Rieko Kubo, Hiroyuki Tokue, Yoshihiko Kominato, Hiroyuki Takei, and Yoichiro Takahashi
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Forensic pathology ,Lung ,integumentary system ,business.industry ,010401 analytical chemistry ,Autopsy ,Anatomy ,medicine.disease ,01 natural sciences ,0104 chemical sciences ,Pathology and Forensic Medicine ,Diaphragm (structural system) ,Stab ,body regions ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,cardiovascular system ,Genetics ,Medicine ,030216 legal & forensic medicine ,Solid organ ,Ct imaging ,business ,Stab wound - Abstract
With the increasing use of postmortem computed tomography (PMCT) in medicolegal autopsies, three-dimensional (3D) models of injured areas can now be generated from multislice computed tomography images. However, since PMCT has low sensitivity for detecting injuries in solid organs in the absence of contrast administration, it has been difficult to demonstrate the tracks of stab wounds leading to solid organ injury using 3D reconstruction. Here, we report one homicide case with two stab wounds. On the skin surface, the stab wounds were located on the neck and anterior chest wall. A medicolegal autopsy revealed that one stab wound in the neck had penetrated the wall of the right pleural cavity and the upper portion of the right lung whereas the other stab wound in the anterior chest wall had penetrated the right diaphragm and the heart. To illustrate the tracks of the stab wounds, superimposed CT images of the body, the excised organ, and a knife model were constructed to obtain a 3D model. This allowed clear and concise visualization of the complex relationship of the knife to the heart incision and the stab wound on the chest surface.
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- 2020
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14. Novel Cardiocerebral Channelopathy Associated with a KCND3 V392I Mutation
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Hiroshi Hasegawa, Shin-Ichiro Hamano, Masahiko Kurabayashi, Masahiko Nishiyama, Yoshiaki Kaneko, Shuntaro Tamura, Rie Sano, Takashi Kobari, Yoshihiko Kominato, Tadashi Nakajima, and Reika Kawabata-Iwakawa
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EARLY REPOLARIZATION SYNDROME ,Paroxysmal atrial fibrillation ,business.industry ,Atrial fibrillation ,General Medicine ,030204 cardiovascular system & hematology ,medicine.disease ,Bioinformatics ,Phenotype ,03 medical and health sciences ,Epilepsy ,0302 clinical medicine ,Channelopathy ,Mutation (genetic algorithm) ,Intellectual disability ,cardiovascular system ,medicine ,030212 general & internal medicine ,Cardiology and Cardiovascular Medicine ,business - Abstract
While a KCND3 V392I mutation uniquely displays a mixed electrophysiological phenotype of Kv4.3, only limited clinical information on the mutation carriers is available. We report two teenage siblings exhibiting both cardiac (early repolarization syndrome and paroxysmal atrial fibrillation) and cerebral phenotypes (epilepsy and intellectual disability), in whom we identified the KCND3 V392I mutation. We propose a link between the KCND3 mutation with a mixed electrophysiological phenotype and cardiocerebral phenotypes, which may be defined as a novel cardiocerebral channelopathy.
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- 2020
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15. Corrigendum to 'Investigation of the applicability of virtual gastroscopy based on postmortem computed tomography to detect changes in the stomach, along with reports of three rare cases' [Legal Med. 52 (2021) 101898]
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Haruki Fukuda, Rie Sano, Akira Hayakawa, Yoichiro Takahashi, Takafumi Okawa, Rieko Kubo, Hiroyuki Takei, Sachiko Awata, Hiroyuki Tokue, Hisashi Akuzawa, Masahiro Yuasa, and Yoshihiko Kominato
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Issues, ethics and legal aspects ,Pathology and Forensic Medicine - Published
- 2023
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16. Usefulness of a tissue optical clearing technique for forensic autopsy
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Yoichiro Takahashi, Akira Hayakawa, Rie Sano, Haruki Fukuda, Rieko Kubo, Hiroyuki Tokue, Takafumi Okawa, Miki Kawamura, and Yoshihiko Kominato
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Genetics ,Humans ,Hemorrhage ,Autopsy ,Tomography, X-Ray Computed ,Coronary Vessels ,Forensic Pathology ,Pathology and Forensic Medicine - Abstract
Forensic pathologists are required to investigate lethal trauma or disease at autopsy. In addition to massive contusions of various organs, a number of small features with potentially fatal implications also need to be sought. Since such lesions may need microscopic examinations for detailed evaluation, it is important to select suitable anatomic locations for tissue sampling. For practical screening of small lesions, we have developed a tissue optical clearing (TOC) technique for forensic autopsy. The technique involves clearing with a non-toxic organic solvent, ethyl cinnamate, which renders excised organs transparent, while hemorrhages or blood-containing vessels remain opaque. Using this technique, tiny hemorrhages in the spinal cord were able to be identified by gross examination, allowing proper selection of locations for tissue sampling. Subsequent histopathological evaluation was successfully performed with no apparent artifacts related with the TOC procedure. In addition, a combination of TOC and targeted CT angiography allowed feasible examination of the arterial occlusive lesion in the superior mesenteric artery, and when combined with micro-CT scanning it was useful for evaluating the lumen of the coronary artery with stent implantation. The results obtained so far indicated that TOC could complement routine forensic autopsy procedures when detailed evaluation of small lesions is required.
- Published
- 2021
17. Investigation of the applicability of virtual gastroscopy based on postmortem computed tomography to detect changes in the stomach, along with reports of three rare cases
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Hiroyuki Takei, Yoichiro Takahashi, Rie Sano, Rieko Kubo, Akira Hayakawa, Hiroyuki Tokue, Sachiko Awata, Takafumi Okawa, Hisashi Akuzawa, Yoshihiko Kominato, Masahiro Yuasa, and Haruki Fukuda
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2d images ,medicine.medical_specialty ,Medicolegal autopsy ,medicine.diagnostic_test ,business.industry ,Stomach ,Anatomical structures ,Autopsy ,Computed tomography ,Pathology and Forensic Medicine ,Issues, ethics and legal aspects ,medicine.anatomical_structure ,Abdomen ,Gastroscopy ,medicine ,Humans ,Radiology ,Virtual endoscopy ,business ,Forensic autopsy ,Tomography, X-Ray Computed - Abstract
Postmortem computed tomography is now being used more commonly for routine forensic investigation. The use of 3D reconstruction techniques including virtual gastroscopy is effective and also improves the speed of interpretation, recognition, and description of specific clinical conditions. However, it has been unclear whether postmortem virtual endoscopy could be applicable for medicolegal autopsy or whether it could complement pathological examination at autopsy. Here, we investigated the applicability of postmortem virtual gastroscopy by reviewing 295 medicolegal autopsy cases seen at our institution, and found four cases in which the technique had been able to demonstrate features corresponding to changes that were evident at autopsy. Thus,postmortem virtual gastroscopy would have only rarely been effective forvisualizing any change in the stomach in such cases. In addition, we describe in detail three of those cases in which virtual gastroscopy had been able to visualize changes in the stomach, including a gastric ulcer, a polyp, and the presence of foamy fluid, which were all verified at autopsy. In those cases, virtual gastroscopy was useful for understanding features in the stomach of the deceased, which were revealed by axial images of the abdomen, to forensic pathologists who were not familiar with PMCT 2D images. Taken together, our findings suggest that postmortem virtual gastroscopy might help facilitate clear, straightforward sharing of information about PMCT images of complex anatomical structures among radiologists and forensic pathologists, as well as non-medical professionals with a limited knowledge of anatomy and physiology.
- Published
- 2021
18. A cell-specific regulatory region of the human ABO blood group gene regulates the neighborhood gene encoding odorant binding protein 2B
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Akira Hayakawa, Megumi Harada, Yoichiro Takahashi, Takafumi Okawa, Rieko Kubo, Rie Sano, Junichi Tsukada, Haruo Takeshita, Haruki Fukuda, and Yoshihiko Kominato
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0301 basic medicine ,Odorant binding protein 2B ,Science ,030204 cardiovascular system & hematology ,Biology ,Polymerase Chain Reaction ,Article ,ABO Blood-Group System ,03 medical and health sciences ,0302 clinical medicine ,Stomach Neoplasms ,ABO blood group system ,Cell Line, Tumor ,Gene expression ,Transcriptional regulation ,Humans ,RNA-Seq ,Gene ,In Situ Hybridization ,In Situ Hybridization, Fluorescence ,Regulation of gene expression ,Multidisciplinary ,Genetic interaction ,Intron ,Epithelial Cells ,Fibroblasts ,Molecular biology ,Introns ,Lipocalins ,Gene regulation ,030104 developmental biology ,Phenotype ,Spectrometry, Fluorescence ,CpG site ,Gene Expression Regulation ,Mutation ,Medicine ,CpG Islands - Abstract
The human ABO blood group system is of great importance in blood transfusion and organ transplantation. ABO transcription is known to be regulated by a constitutive promoter in a CpG island and regions for regulation of cell-specific expression such as the downstream + 22.6-kb site for epithelial cells and a site in intron 1 for erythroid cells. Here we investigated whether the + 22.6-kb site might play a role in transcriptional regulation of the gene encoding odorant binding protein 2B (OBP2B), which is located on the centromere side 43.4 kb from the + 22.6-kb site. In the gastric cancer cell line KATOIII, quantitative PCR analysis demonstrated significantly reduced amounts of OBP2B and ABO transcripts in mutant cells with biallelic deletions of the site created using the CRISPR/Cas9 system, relative to those in the wild-type cells, and Western blotting demonstrated a corresponding reduction of OBP2B protein in the mutant cells. Moreover, single-molecule fluorescence in situ hybridization assays indicated that the amounts of both transcripts were correlated in individual cells. These findings suggest that OBP2B could be co-regulated by the + 22.6-kb site of ABO.
- Published
- 2021
19. Histone deacetylase inhibitors suppress ACE2 and ABO simultaneously, suggesting a preventive potential against COVID-19
- Author
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Rie Sano, Megumi Harada, Haruki Fukuda, Akira Hayakawa, Takafumi Okawa, Yoichiro Takahashi, Yoshihiko Kominato, and Rieko Kubo
- Subjects
0301 basic medicine ,2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,Science ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,030204 cardiovascular system & hematology ,Article ,ABO Blood-Group System ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,ABO blood group system ,Panobinostat ,Humans ,Medicine ,Multidisciplinary ,Drug discovery ,business.industry ,Serine Endopeptidases ,COVID-19 ,Epithelial Cells ,Virology ,COVID-19 Drug Treatment ,Histone Deacetylase Inhibitors ,030104 developmental biology ,Risk factors ,Gene Expression Regulation ,Viral infection ,Butyric Acid ,Angiotensin-Converting Enzyme 2 ,Histone deacetylase ,Prevention control ,business ,Haematological diseases - Abstract
Coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has spread worldwide as a pandemic throughout 2020. Since the virus uses angiotensin-converting enzyme 2 (ACE2) as a receptor for cellular entry, increment of ACE2 would lead to an increased risk of SARS-CoV-2 infection. At the same time, an association of the ABO blood group system with COVID-19 has also been highlighted: there is increasing evidence to suggest that non-O individuals are at higher risk of severe COVID-19 than O individuals. These findings imply that simultaneous suppression of ACE2 and ABO would be a promising approach for prevention or treatment of COVID-19. Notably, we have previously clarified that histone deacetylase inhibitors (HDACIs) are able to suppress ABO expression in vitro. Against this background, we further evaluated the effect of HDACIs on cultured epithelial cell lines, and found that HDACIs suppress both ACE2 and ABO expression simultaneously. Furthermore, the amount of ACE2 protein was shown to be decreased by one of the clinically-used HDACIs, panobinostat, which has been reported to reduce B-antigens on cell surfaces. On the basis of these findings, we conclude that panobinostat could have the potential to serve as a preventive drug against COVID-19.
- Published
- 2021
- Full Text
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20. Novel Cardiocerebral Channelopathy Associated with a KCND3 V392I Mutation
- Author
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Tadashi, Nakajima, Reika, Kawabata-Iwakawa, Yoshiaki, Kaneko, Shin-Ichiro, Hamano, Rie, Sano, Shuntaro, Tamura, Hiroshi, Hasegawa, Takashi, Kobari, Yoshihiko, Kominato, Masahiko, Nishiyama, and Masahiko, Kurabayashi
- Subjects
Adolescent ,Siblings ,Mothers ,Electroencephalography ,Middle Aged ,Syncope ,Pedigree ,Electrocardiography ,Young Adult ,Death, Sudden, Cardiac ,Shal Potassium Channels ,Intellectual Disability ,Atrial Fibrillation ,Mutation ,Humans ,Channelopathies ,Female ,Epilepsies, Partial - Abstract
While a KCND3 V392I mutation uniquely displays a mixed electrophysiological phenotype of Kv4.3, only limited clinical information on the mutation carriers is available. We report two teenage siblings exhibiting both cardiac (early repolarization syndrome and paroxysmal atrial fibrillation) and cerebral phenotypes (epilepsy and intellectual disability), in whom we identified the KCND3 V392I mutation. We propose a link between the KCND3 mutation with a mixed electrophysiological phenotype and cardiocerebral phenotypes, which may be defined as a novel cardiocerebral channelopathy.
- Published
- 2020
21. DNA methylation of the NR3C1 promoter region in brains of pediatric victims of physical abuse
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Akira Hayakawa, Masayuki Murayama, Rieko Kubo, Rie Sano, Hikaru Kuninaka, Yoichiro Takahashi, and Yoshihiko Kominato
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Male ,Autopsy ,Bioinformatics ,Hippocampus ,Epigenesis, Genetic ,03 medical and health sciences ,Receptors, Glucocorticoid ,0302 clinical medicine ,Arts and Humanities (miscellaneous) ,Adverse Childhood Experiences ,Cerebellum ,030225 pediatrics ,Humans ,Medicine ,Epigenetics ,Promoter Regions, Genetic ,Gene ,Retrospective Studies ,business.industry ,Infant ,Promoter ,DNA Methylation ,Physical abuse ,Physical Abuse ,Nuclear receptor ,Child, Preschool ,DNA methylation ,Biomarker (medicine) ,Female ,Neurology (clinical) ,business ,030217 neurology & neurosurgery - Abstract
Early life stress (ELS) has been suggested to cause epigenetic changes to genes in the brain, such as the Nuclear Receptor Subfamily 3, Group C, Member 1 gene (NR3C1). Conversely, evaluation of the epigenetic status in the postmortem brain might provide clues to the antemortem ELS experience. We examined DNA methylation of the 1F promoter region of NR3C1 in the postmortem brains of eight children including four ELS cases. As a result, DNA methylation was evident in ELS cases due to severe physical abuse. Epigenetic status may have potential application as a biomarker for clarifying the antemortem experiences of deceased.
- Published
- 2018
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22. Usefulness of coronary postmortem computed tomography angiography to detect lesions in the coronary artery and myocardium in cases of sudden death
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Hiroyuki Takei, Keiko Takahashi, Yoichiro Takahashi, Sachiko Awata, Satoshi Hirasawa, Yoshihiko Kominato, Naoya Ohta, Hiroyuki Tokue, Takehiro Shimada, and Rie Sano
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Adult ,Male ,medicine.medical_specialty ,Adolescent ,Computed Tomography Angiography ,Coronary Vessel Anomalies ,Autopsy ,Sudden death ,030218 nuclear medicine & medical imaging ,Pathology and Forensic Medicine ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Left coronary artery ,Cause of Death ,Internal medicine ,medicine.artery ,medicine ,Humans ,030216 legal & forensic medicine ,Myocardial infarction ,Child ,Computed tomography angiography ,Aged, 80 and over ,medicine.diagnostic_test ,business.industry ,Myocardium ,Hypervascularity ,Middle Aged ,medicine.disease ,Coronary Vessels ,Issues, ethics and legal aspects ,Death, Sudden, Cardiac ,medicine.anatomical_structure ,Anomalous aortic origin of a coronary artery ,Cardiology ,Female ,business ,Artery - Abstract
Coronary postmortem computed tomography angiography (coronary PMCTA) has been introduced as a routine examination procedure for autopsy at our department. Here, we reviewed eight autopsy cases in which apparent histopathological changes including acute myocardial infarction (AMI), anomalous aortic origin of a coronary artery (AAOCA), hypertrophic obstructive cardiomyopathy (HOCM) and acute myocarditis were involved in the cause of death. For investigation of the coronary artery and shape of the heart, coronary PMCTA was valuable in detecting narrowing or obstruction of coronary artery in AMI, indicating an anomalous aortic origin of the left coronary artery in AAOCA, and demonstrating septal hypertrophy and intracavitary obstruction in HOCM. However, it was debatable whether the hypervascularity demonstrated by coronary PMCTA in the case of acute myocarditis was more prominent than the vascular images obtained in other cases without inflammation. Thus, coronary PMCTA appeared to be useful not only for detection of coronary artery stenosis, but also for indicating other distinctive changes involved in AAOCA and HOCM.
- Published
- 2018
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23. Rupture of segmental dilatation of the sigmoid colon resulting from blunt force to the abdomen in a child
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Rieko Kubo, Rie Sano, Hiroyuki Takei, Akira Hayakawa, Yoichiro Takahashi, Yoshihiko Kominato, Hiroyuki Tokue, Haruki Fukuda, and Sachiko Awata
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medicine.medical_specialty ,business.industry ,Perforation (oil well) ,Sigmoid colon ,Peritonitis ,Autopsy ,medicine.disease ,Pathology and Forensic Medicine ,Abdominal wall ,medicine.anatomical_structure ,Blunt ,Medicine ,Abdomen ,Radiology, Nuclear Medicine and imaging ,Radiology ,General hospital ,business - Abstract
A four-year-old child died nine hours after he was found lying crying in the yard of a nursery school during morning playtime. Although no-one had witnessed any related event, time-lapse images recorded by a security camera suggested that he had fallen forward onto the ground while running with a hula hoop he had been using to simulate a car steering wheel. Since the cause of death was not determined by the doctor at the general hospital to which the boy had been transferred, and police investigation suspected that the hula hoop had struck the boy in the abdomen, a medicolegal autopsy was performed to clarify the cause of death. Prior to autopsy, postmortem computed tomography (PMCT) revealed free intraperitoneal fluid, free intraperitoneal gas, and segmental sigmoid colon dilatation, suggesting perforation or rupture of the bowel and subsequent peritonitis. At autopsy, external examination demonstrated no bruising on the abdomen, but internal examination revealed bleeding in the subcutaneous fatty tissue of the abdominal wall, rupture in the region of the sigmoid colon showing segmental dilatation, and disseminated peritonitis. 3D volume-rendered images constructed from the PMCT data suggested that a direct blow to the abdomen might have caused injury to the sigmoid colon by compressing it against the spine, and that the rupture could have been facilitated by the segmental dilatation. In the present case, reciprocity between autopsy and PMCT was useful for verifying rupture in an area of segmental dilatation of the sigmoid colon caused by blunt force to the abdomen.
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- 2021
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24. Sequence analysis ofABOand its homologues is valid for species identification
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Rieko Kubo, Junko Fujihara, Haruki Fukuda, Yoshihiko Kominato, Rie Sano, Momoko Kobayashi, Yoichiro Takahashi, Haruo Takeshita, and Keiko Takahashi
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0301 basic medicine ,Cloning ,Phylogenetic tree ,Sequence analysis ,Hematology ,Computational biology ,Biology ,law.invention ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,0302 clinical medicine ,chemistry ,law ,Gene family ,030216 legal & forensic medicine ,Primer (molecular biology) ,Genotyping ,DNA ,Polymerase chain reaction - Abstract
Background ABO and its paralogues, such as A3GALT2 and GGTA1, encoding α1,3-Gal(NAc) transferases, belong to the glycosyltransferase 6 (GT6) gene family. We have developed an alternative method for the identification of species based on sequence variations within the GT6 gene family, which is applicable to degraded DNA. Methods/materials DNA samples prepared from control mammalian species, together with an unknown sample, were polymerase chain reaction (PCR)-amplified using one universal primer pair targeting the sequences in the last coding exons of the GT6 gene family, yielding 141-bp products derived from those multiple loci. After cloning, sequence determination and Basic Local Alignment Search Tool analysis, phylogenetic trees were constructed. Results Comparison of the sequences obtained with those references showed good concordance with each of the starting species of mammals. This system was able to identify 'mouse' or 'rodent' as the origin of the unknown sample. Conclusion For the identification of species, genotyping of ABO and its homologues would be applicable for the analysis of degraded DNA samples. Although the method employed in this study is likely valid for mammals, it would not be suitable for birds, fish and reptiles. It may be possible to improve the present method for use with other species by employing an alternative universal primer set.
- Published
- 2017
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25. Use of postmortem computed tomography to retrieve small metal fragments derived from a weapon in the bodies of victims in two homicide cases
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Masahiro Yuasa, Yoshihiko Kominato, Rieko Kubo, Akira Hayakawa, Takehiro Shimada, Hisashi Akuzawa, Sachiko Awata, Satoshi Hirasawa, Hiroyuki Tokue, Rie Sano, Hiroyuki Takei, Shinji Uetake, Yoichiro Takahashi, and Masayuki Murayama
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Male ,medicine.medical_specialty ,education ,Computed tomography ,Criminal investigation ,030218 nuclear medicine & medical imaging ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,Homicide ,medicine ,Humans ,030216 legal & forensic medicine ,Forensic Pathology ,Foreign Bodies ,Aged, 80 and over ,medicine.diagnostic_test ,business.industry ,Middle Aged ,Issues, ethics and legal aspects ,Metals ,Wounds and Injuries ,Female ,Autopsy ,Radiology ,Weapons ,Tomography, X-Ray Computed ,business - Abstract
Postmortem computed tomography (PMCT) is becoming a commonly used modality in routine forensic investigation. Mechanical injuries including lacerations, incisions, stab wounds and gunshot wounds frequently contain foreign bodies that may have significant value as clues in criminal investigations. CT is a sensitive modality for detection of metal foreign bodies that may be associated with injuries to the victim in cases of homicide or traffic accidents. Here we report two cases in which PMCT was able to act as a guide to forensic pathologists for retrieval of metal fragments in the corpses of the victims, the retrieved fragments then being used to validate the confessions of the assailants through comparison with the knife and the crowbar, respectively, that had been used in the crimes. In these cases, the small metal fragments retrieved from the corpses of the victims with the aid of PMCT were decisive pieces of evidence confirming the circumstances of the crimes. These cases illustrate how PMCT can be used to complement the findings of classical autopsy for integrative investigation of corpses with injury.
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- 2018
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26. Human ABO gene transcriptional regulation
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Akira Hayakawa, Rie Sano, Yoshihiko Kominato, Kenichi Ogasawara, and Yoichiro Takahashi
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Genetics ,Regulation of gene expression ,Transcription, Genetic ,Cells ,Immunology ,Hematology ,Review ,Biology ,Abo gene ,ABO Blood-Group System ,Gene Expression Regulation ,Transcription (biology) ,Transcriptional regulation ,Immunology and Allergy ,Humans ,Promoter Regions, Genetic - Published
- 2019
27. Fucosylated α1-acid glycoprotein as a biomarker to predict prognosis following tumor immunotherapy of patients with lung cancer
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Akira Mogi, Rie Sano, Shin Yazawa, Hiroyuki Kuwano, Nobuhiro Nakazawa, Ken Shirabe, Takehiko Yokobori, Kyoichi Kaira, and Takayuki Asao
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0301 basic medicine ,Oncology ,medicine.medical_specialty ,medicine.medical_treatment ,lcsh:Medicine ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Risk factor ,lcsh:Science ,Lung cancer ,Chemotherapy ,Multidisciplinary ,biology ,business.industry ,lcsh:R ,Cancer ,Immunotherapy ,medicine.disease ,030104 developmental biology ,030220 oncology & carcinogenesis ,biology.protein ,Biomarker (medicine) ,lcsh:Q ,Nivolumab ,Antibody ,business - Abstract
Immunotherapy targeting immune checkpoint molecules has provided remarkable clinical benefits in cancer patients but no clinically relevant biomarker for predicting treatment outcomes exists. Recently, we demonstrated that glycan structures of serum α1-acid glycoprotein (AGP) changed dramatically in cancer patients and that α1,3fucosylated AGP (fAGP) levels increased along with disease progression and decreased responding to chemotherapy treatments. Here, the fAGP was analyzed in sera prospectively obtained from 39 patients with advanced lung cancer who underwent immunotherapy with anti-PD-1 antibody, nivolumab. Twenty-three patients had significantly high fAGP levels above the cut-off value (H-fAGP) at one month after starting the treatment and 20 patients in this group, whose tumor sizes did not decrease, maintained high fAGP levels continuously and subsequently died. However, the other 16 patients, whose fAGP levels decreased or maintained below the cut-off value (L-fAGP), survived during a 2-year observation even though 5 patients in this group had no tumor shrinkage. Accordingly, the overall survival rate was found to significantly correlate with the fAGP level. Multivariate analyses revealed that the H-fAGP was an independent risk factor for cancer progression. Therefore, the fAGP level appeared to be a reliable biomarker for predicting clinical efficacy of immunotherapy with nivolumab.
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- 2019
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28. Fucosylated α
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Takehiko, Yokobori, Shin, Yazawa, Takayuki, Asao, Nobuhiro, Nakazawa, Akira, Mogi, Rie, Sano, Hiroyuki, Kuwano, Kyoichi, Kaira, and Ken, Shirabe
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Male ,Glycosylation ,Lung Neoplasms ,Orosomucoid ,Middle Aged ,Prognosis ,Predictive markers ,Article ,Gene Expression Regulation, Neoplastic ,Tumour biomarkers ,Nivolumab ,Biomarkers, Tumor ,Humans ,Female ,Immunotherapy ,Aged - Abstract
Immunotherapy targeting immune checkpoint molecules has provided remarkable clinical benefits in cancer patients but no clinically relevant biomarker for predicting treatment outcomes exists. Recently, we demonstrated that glycan structures of serum α1-acid glycoprotein (AGP) changed dramatically in cancer patients and that α1,3fucosylated AGP (fAGP) levels increased along with disease progression and decreased responding to chemotherapy treatments. Here, the fAGP was analyzed in sera prospectively obtained from 39 patients with advanced lung cancer who underwent immunotherapy with anti-PD-1 antibody, nivolumab. Twenty-three patients had significantly high fAGP levels above the cut-off value (H-fAGP) at one month after starting the treatment and 20 patients in this group, whose tumor sizes did not decrease, maintained high fAGP levels continuously and subsequently died. However, the other 16 patients, whose fAGP levels decreased or maintained below the cut-off value (L-fAGP), survived during a 2-year observation even though 5 patients in this group had no tumor shrinkage. Accordingly, the overall survival rate was found to significantly correlate with the fAGP level. Multivariate analyses revealed that the H-fAGP was an independent risk factor for cancer progression. Therefore, the fAGP level appeared to be a reliable biomarker for predicting clinical efficacy of immunotherapy with nivolumab.
- Published
- 2019
29. RUNX1 mutation in a patient with myelodysplastic syndrome and decreased erythrocyte expression of blood group A antigen
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Hatsue Tsuneyama, Kenichi Ogasawara, Akihiko Yokohama, Haruo Takeshita, Rie Sano, Masato Omata, Rieko Kubo, Yoichiro Takahashi, Yoshihiko Kominato, Megumi Harada, Hiroshi Handa, Junichi Tsukada, and Akira Hayakawa
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Erythrocytes ,Somatic cell ,Immunology ,030204 cardiovascular system & hematology ,medicine.disease_cause ,Genetic analysis ,ABO Blood-Group System ,03 medical and health sciences ,0302 clinical medicine ,hemic and lymphatic diseases ,ABO blood group system ,medicine ,Immunology and Allergy ,Humans ,Enhancer of Zeste Homolog 2 Protein ,WT1 Proteins ,Mutation ,biology ,Hematology ,Middle Aged ,Molecular biology ,Repressor Proteins ,genomic DNA ,medicine.anatomical_structure ,Gene Expression Regulation ,Myelodysplastic Syndromes ,DNA methylation ,Core Binding Factor Alpha 2 Subunit ,biology.protein ,Female ,Bone marrow ,Antibody ,K562 Cells ,030215 immunology - Abstract
Background Loss of blood group ABO antigens on red blood cells (RBCs) is well known in patients with leukemias, and such decreased ABO expression has been reported to be strongly associated with hypermethylation of the ABO promoter. We investigated the underlying mechanism responsible for A-antigen reduction on RBCs in a patient with myelodysplastic syndrome. Study design and methods Genetic analysis of ABO was performed by PCR and sequencing using peripheral blood. RT-PCR were carried out using cDNA prepared from total bone marrow (BM) cells. Bisulfite genomic sequencing was performed using genomic DNA from BM cells. Screening of somatic mutations was carried out using a targeted sequencing panel with genomic DNA from BM cells, followed by transient transfection assays. Results Genetic analysis of ABO did not reveal any mutation in coding regions, splice sites, or regulatory regions. RT-PCR demonstrated reduction of A-transcripts when the patient's RBCs were not agglutinated by anti-A antibody and did not indicate any significant increase of alternative splicing products in the patient relative to the control. DNA methylation of the ABO promoter was not obvious in erythroid cells. Targeted sequencing identified somatic mutations in ASXL1, EZH2, RUNX1, and WT1. Experiments involving transient transfection into K562 cells showed that the expression of ABO was decreased by expression of the mutated RUNX1. Conclusion Because the RUNX1 mutation encoded an abnormally elongated protein without a transactivation domain which could act as dominant negative inhibitor, this frame-shift mutation in RUNX1 may be a genetic candidate contributing to A-antigen loss on RBCs.
- Published
- 2019
30. Histone deacetylase inhibitors suppressABOtranscription in vitro, leading to reduced expression of the antigens
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Tamiko Nakajima, Keiko Takahashi, Rieko Kubo, Junichi Tsukada, Yoichiro Takahashi, Momoko Kobayashi, Hiroshi Handa, Rie Sano, and Yoshihiko Kominato
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0301 basic medicine ,Histone deacetylase 5 ,Chemistry ,HDAC11 ,Histone deacetylase 2 ,Immunology ,Sodium butyrate ,Hematology ,030204 cardiovascular system & hematology ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,0302 clinical medicine ,hemic and lymphatic diseases ,ABO blood group system ,Panobinostat ,parasitic diseases ,medicine ,Cancer research ,Immunology and Allergy ,Histone deacetylase ,Vorinostat ,medicine.drug - Abstract
BACKGROUND The ABO system is of fundamental importance in the fields of transfusion and transplantation and has apparent associations with certain diseases, including cardiovascular disorders. ABO expression is reduced in the late phase of erythroid differentiation in vitro, whereas histone deacetylase inhibitors (HDACIs) are known to promote cell differentiation. Therefore, whether or not HDACIs could reduce the amount of ABO transcripts and A or B antigens is an intriguing issue. STUDY DESIGN AND METHODS Quantitative polymerase chain reactions were carried out for the ABO transcripts in erythroid-lineage K562 and epithelial-lineage KATOIII cells after incubation with HDACIs, such as sodium butyrate, panobinostat, vorinostat, and sodium valproate. Flow cytometric analysis was conducted to evaluate the amounts of antigen in KATOIII cells treated with panobinostat. Quantitative chromatin immunoprecipitation (ChIP) assays and luciferase assays were performed on both cell types to examine the mechanisms of ABO suppression. RESULTS HDACIs reduced the ABO transcripts in both K562 and KATOIII cells, with panobinostat exerting the most significant effect. Flow cytometric analysis demonstrated a decrease in B-antigen expression on panobinostat-treated KATOIII cells. ChIP assays indicated that panobinostat altered the modification of histones in the transcriptional regulatory regions of ABO, and luciferase assays demonstrated reduced activity of these elements. CONCLUSION ABO transcription seems to be regulated by an epigenetic mechanism. Panobinostat appears to suppress ABO transcription, reducing the amount of antigens on the surface of cultured cells.
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- 2016
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31. Epithelial Expression of Human ABO Blood Group Genes Is Dependent upon a Downstream Regulatory Element Functioning through an Epithelial Cell-specific Transcription Factor, Elf5
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Kenichi Ogasawara, Rie Sano, Yoichiro Takahashi, Keiko Takahashi, Yoshihiko Kominato, Haruo Takeshita, Momoko Kobayashi, Tamiko Nakajima, and Rieko Kubo
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0301 basic medicine ,congenital, hereditary, and neonatal diseases and abnormalities ,Biology ,Response Elements ,Biochemistry ,Epithelium ,ABO Blood-Group System ,03 medical and health sciences ,Transcription (biology) ,hemic and lymphatic diseases ,ABO blood group system ,parasitic diseases ,Humans ,Gene Regulation ,Electrophoretic mobility shift assay ,Nucleotide Motifs ,Enhancer ,Molecular Biology ,Transcription factor ,Regulation of gene expression ,CRISPR ,Cas ,epithelial cell ,ETS transcription factor family ,gene regulation ,tissue-specific transcription factor ,transcription enhancer ,ABO ,Elf5 ,Proto-Oncogene Proteins c-ets ,Cell Biology ,Molecular biology ,DNA-Binding Proteins ,030104 developmental biology ,K562 Cells ,Chromatin immunoprecipitation ,Transcription Factors - Abstract
The human ABO blood group system is of great importance in blood transfusion and organ transplantation. The ABO system is composed of complex carbohydrate structures that are biosynthesized by A- and B-transferases encoded by the ABO gene. However, the mechanisms regulating ABO gene expression in epithelial cells remain obscure. On the basis of DNase I-hypersensitive sites in and around ABO in epithelial cells, we prepared reporter plasmid constructs including these sites. Subsequent luciferase assays and histone modifications indicated a novel positive regulatory element, designated the +22.6-kb site, downstream from ABO, and this was shown to enhance ABO promoter activity in an epithelial cell-specific manner. Expression of ABO and B-antigen was reduced in gastric cancer KATOIII cells by biallelic deletion of the +22.6-kb site using the CRISPR/Cas9 system. Electrophoretic mobility shift assay and chromatin immunoprecipitation assay demonstrated that the site bound to an epithelial cell-specific transcription factor, Elf5. Mutation of the Ets binding motifs to abrogate binding of this factor reduced the regulatory activity of the +22.6-kb site. Furthermore, ELF5 knockdown with shRNA reduced both endogenous transcription from ABO and B-antigen expression in KATOIII cells. Thus, Elf5 appeared to be involved in the enhancer potential of the +22.6-kb site. These results support the contention that ABO expression is dependent upon a downstream positive regulatory element functioning through a tissue-restricted transcription factor, Elf5, in epithelial cells.
- Published
- 2016
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32. Use of postmortem coronary computed tomography angiography with water-insoluble contrast medium to detect stenosis of the left anterior descending artery in a case of sudden death
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Sachiko Awata, Yoshihiko Kominato, Susumu Kobayashi, Takehiro Shimada, Satoshi Hirasawa, Rie Sano, Hiroyuki Tokue, Hiroyuki Takei, Yoichiro Takahashi, and Keiko Takahashi
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Adult ,Male ,medicine.medical_specialty ,Computed Tomography Angiography ,Myocardial Ischemia ,Contrast Media ,Autopsy ,01 natural sciences ,Sudden death ,Pathology and Forensic Medicine ,03 medical and health sciences ,Imaging, Three-Dimensional ,0302 clinical medicine ,Coronary thrombosis ,Internal medicine ,medicine ,Humans ,030216 legal & forensic medicine ,Thrombus ,Computed tomography angiography ,medicine.diagnostic_test ,business.industry ,Coronary Thrombosis ,010401 analytical chemistry ,Coronary Stenosis ,medicine.disease ,0104 chemical sciences ,Issues, ethics and legal aspects ,Contrast medium ,Stenosis ,Death, Sudden, Cardiac ,medicine.anatomical_structure ,cardiovascular system ,Cardiology ,Gelatin ,Radiology ,Barium Sulfate ,business ,Artery - Abstract
A 40-year-old man was found dead on a sidewalk in an expressway parking area one hour after he had entered the area on a motorcycle. A medicolegal autopsy was performed to reveal the cause of this sudden and unexpected death. Postmortem coronary CT angiography after introduction of 5% gelatin-barium emulsion as a radiopaque contrast medium into the heart demonstrated a significant arterial luminal filling defect in the left anterior descending (LAD) coronary artery. Macroscopic and microscopic examinations revealed that a thrombus had become deposited on ruptured plaque within the LAD artery, and that a small amount of the contrast medium was present between the thrombus and the vessel endothelium. These histological findings were consistent with incomplete occlusion of the LAD artery in the 3D reconstructed image. The cause of death in this case was definitively determined to be ischemic heart disease. Postmortem angiography played a role in screening of a vascular lesion that was subsequently verified by histology to have been responsible for sudden and unexpected death.
- Published
- 2016
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33. Preparation and characterization of antifouling poly(vinyl chloride- co -poly(ethylene glycol)methyl ether methacrylate) membranes
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Rie Sano, Zhuang Zhou, Toru Ishigami, Yuriko Kakihana, Saeid Rajabzadeh, Abdul Rajjak Shaikh, and Hideto Matsuyama
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Fouling ,Microfiltration ,Membrane fouling ,Filtration and Separation ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Methacrylate ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Biofouling ,chemistry.chemical_compound ,Membrane ,Adsorption ,chemistry ,Chemical engineering ,Polymer chemistry ,General Materials Science ,Physical and Theoretical Chemistry ,0210 nano-technology ,Ethylene glycol - Abstract
Two series of antifouling microfiltration membranes (MF) with different pure water permeabilities were fabricated using poly(vinyl chloride-co-poly(ethylene glycol)methyl ether methacrylate) (poly(VC-co-PEGMA)) copolymers with different PEGMA segment percentage via nonsolvent-induced phase separation (NIPS) method. Membranes with similar water permeability were obtained for each series by changing the dope solution composition, because the water permeability can affect the membrane fouling property. Bovine serum albumin (BSA) adsorption on copolymer films decreased and membrane surface pore size, hydrophilicity, and antifouling properties increased by increasing the PEGMA segment percentage. BSA filtration results revealed that the hydrophilicity of the membrane and the initial water flux more strongly affected the fouling propensity than the membrane surface pore size. Molecular dynamics simulation was carried out to investigate the state of the PEGMA on the membrane surface for clarifying the fouling mechanism.
- Published
- 2016
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34. Tuberous sclerosis related-lesions detected by postmortem computed tomography
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Rieko Kubo, Hiroyuki Takei, Rie Sano, Yoichiro Takahashi, Kazuyuki Saito, Akira Hayakawa, Aya Takada, Satoko Kimura, Sachiko Awata, Hiroyuki Tokue, Yoshihiko Kominato, and Haruki Fukuda
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Pathology ,medicine.medical_specialty ,Lung ,Angiomyolipoma ,medicine.diagnostic_test ,business.industry ,Autopsy ,Magnetic resonance imaging ,Lipoma ,medicine.disease ,Pathology and Forensic Medicine ,Tuberous sclerosis ,medicine.anatomical_structure ,Multifocal micronodular pneumocyte hyperplasia ,Subependymal zone ,medicine ,Radiology, Nuclear Medicine and imaging ,business - Abstract
Tuberous sclerosis (TS) is an autosomal-dominant inherited neurocutaneous syndrome characterized by the presence of hamartomatous lesions in organs such as the skin, eye, brain, lung, heart, kidney and bone. Since evaluation of this disorder has been revolutionized by computed tomography (CT) and magnetic resonance imaging (MRI), the radiologic manifestations of TS have become clinically important for diagnosis. However, it has remained unclear whether postmortem computed tomography (PMCT) is available for recognition of the various organ manifestations of TS in deceased individuals. We present two autopsy cases in which PMCT indicated subependymal calcified tuberous lesions in the brain, cysts or multiple tiny nodules associated with lymphangiomyomatosis or multifocal micronodular pneumocyte hyperplasia in the lungs, respectively, angiomyolipoma in the kidneys, lipoma in the liver, multiple sclerotic lesions in the pelvis and vertebrae, and scoliosis. Such lesions are characteristic of TS. In this way we were able to confirm the validity of PMCT for demonstrating lesions associated with TS in these two cases, and its usefulness for complementing the findings of autopsy in patients with TS.
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- 2020
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35. Tattoo image composed of radiopaque deposits demonstrated by postmortem computed tomography
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Satoshi Hirasawa, Rieko Kubo, Yoshihiko Kominato, Takehiro Shimada, Rie Sano, Akira Hayakawa, Masahiro Yuasa, Shinji Uetake, Sachiko Awata, Hisashi Akuzawa, Hiroyuki Tokue, Hiroyuki Takei, and Yoichiro Takahashi
- Subjects
Inguinal lymph nodes ,Autopsy ,Computed tomography ,Thigh ,030218 nuclear medicine & medical imaging ,Pathology and Forensic Medicine ,Internal examination ,03 medical and health sciences ,0302 clinical medicine ,Medicine ,Humans ,030216 legal & forensic medicine ,Foreign Bodies ,Skin ,Titanium ,medicine.diagnostic_test ,Tattooing ,business.industry ,Mercury Compounds ,Anatomy ,Forensic Medicine ,Middle Aged ,Issues, ethics and legal aspects ,Suicide ,medicine.anatomical_structure ,Postmortem Changes ,External Examination ,Female ,Ink ,Lymph ,Lymph Nodes ,business ,Tomography, X-Ray Computed - Abstract
Postmortem computed tomography (PMCT) is becoming used more commonly in routine forensic investigation. CT is sensitive for detection of metal foreign bodies. Here we report a case of suicide due to self-ignition of kerosene that the victim had poured over herself. Prior to autopsy, PMCT detected tiny radiopaque particles arranged in a row in the surface of the back and either thigh, together with a series of similar particles under the skin lateral to the breasts or the bilateral inguinal region. At autopsy, external examination revealed third-degree burns involving charred tissues all over the body except for the head. Tattoos were visible on the back and on either thigh. The tattoos had colored designs, and the red portions corresponded to the radiopaque particles in the surface of the body. Internal examination demonstrated swelling of the axillary and inguinal lymph nodes, which corresponded to the radiopaque particles. A wave length-dispersive X-ray spectroscopy revealed deposition of mercury and titanium in the inguinal lymph nodes. Thus, it was plausible that the ink could have contributed to the radiopaque particles found by PMCT in the surface of the back and thighs, as well in the lymph nodes. The present case was able to provide clues for interpretation of radiopaque particles revealed by PMCT in the surface of the body.
- Published
- 2018
36. Preparation of hydrophilic vinyl chloride copolymer hollow fiber membranes with antifouling properties
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Yoshikage Ohmukai, Rie Sano, Yuriko Kakihana, Hideto Matsuyama, Saeid Rajabzadeh, and Toru Ishigami
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Materials science ,General Physics and Astronomy ,Surfaces and Interfaces ,General Chemistry ,Condensed Matter Physics ,Methacrylate ,Vinyl chloride ,Surfaces, Coatings and Films ,Biofouling ,chemistry.chemical_compound ,Membrane ,Monomer ,chemistry ,Hollow fiber membrane ,Polymer chemistry ,Copolymer ,Ethylene glycol - Abstract
Hydrophilic vinyl chloride copolymer hollow fiber membranes with antifouling properties were prepared from brominated vinyl chloride-hydroxyethyl methacrylate copolymer (poly(VC-co-HEMA-Br)). The base membrane was grafted with two different zwitterionic monomers, (2-methacryloyloxyethylphosphorylcholine) (MPC) and [2-(methacryloyloxy) ethyl] dimethyl (3-sulfopropyl) ammonium hydroxide) (MEDSAH), and poly(ethylene glycol) methyl ether methacrylate (PEGMA). The effect of the grafting on the base membrane hydrophilicity and antifouling properties was investigated. For comparison of the results, the pure water permeabilities and pore sizes at the outer surfaces of the grafted hollow fiber membranes were controlled to be similar. A poly(VC-co-HEMA-Br) hollow fiber membrane with similar pure water permeability and pore size was also prepared as a control membrane. A BSA solution was used as a model fouling solution for evaluation of the antifouling properties. Grafting with zwitterionic monomers and PEGMA improved the antifouling properties compared with the control membrane. The PEGMA grafted membrane showed the best antifouling properties among the grafted membranes
- Published
- 2015
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37. Postmortem computed tomography evaluation of fatal gas embolism due to connection of an intravenous cannula to an oxygen supply
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Rieko Kubo, Susumu Kobayashi, Akiyuki Yasuda, Rie Sano, Takehiro Shimada, Hiroyuki Takei, Yoichiro Takahashi, Satoshi Hirasawa, Yoshihiko Kominato, Hiroyuki Tokue, Keiko Takahashi, Sachiko Awata, and Eri Kuboya
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Male ,medicine.medical_specialty ,01 natural sciences ,Pathology and Forensic Medicine ,Metastasis ,03 medical and health sciences ,Pulmonary Disease, Chronic Obstructive ,0302 clinical medicine ,Fatal Outcome ,Embolus ,medicine.artery ,medicine ,Cannula ,Embolism, Air ,Humans ,030216 legal & forensic medicine ,Vein ,Forensic Pathology ,Cause of death ,Aged, 80 and over ,business.industry ,010401 analytical chemistry ,medicine.disease ,0104 chemical sciences ,Oxygen ,Issues, ethics and legal aspects ,Pneumonia ,medicine.anatomical_structure ,Embolism ,Ventricle ,Pulmonary artery ,Radiology ,Autopsy ,business ,Tomography, X-Ray Computed - Abstract
An 84-year-old man who had suffered from chronic obstructive pulmonary disease accompanied by moderate pneumonia as well as gastric cancer with liver metastasis was found dead by a nurse, who noticed that the patient's intravenous catheter in the left forearm had been erroneously connected to an oxygen supply in his hospital room, leading to infusion of oxygen into a vein. Postmortem CT scanning demonstrated multiple accumulations of gas in the pulmonary artery, the right atrium and ventricle, as well as the left subclavian and brachiocephalic veins, corresponding to the route that the infused gas would have taken to the heart and pulmonary artery. Conventional autopsy revealed the presence of gas in the right ventricle. These findings suggested that the immediate cause of death was a gas embolus due to oxygen that had entered the cardiopulmonary circulation via the intravenous catheter. This case highlights the usefulness of postmortem imaging as an aid to conventional autopsy for demonstrating gas embolism.
- Published
- 2017
38. A 3·0-kb deletion including an erythroid cell-specific regulatory element in intron 1 of the ABO blood group gene in an individual with the Bmphenotype
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H. Yamao, E. Kuboya, Rieko Kubo, Haruo Takeshita, Kenichi Ogasawara, Yoshihiko Kominato, Yoichiro Takahashi, Kazumi Isa, Keiko Takahashi, Rie Sano, Makoto Uchikawa, Tamiko Nakajima, and T. Kishida
- Subjects
Genetics ,Molecular Sequence Data ,Intron ,Hematology ,General Medicine ,Biology ,Polymorphism, Single Nucleotide ,Genetic analysis ,Phenotype ,Molecular biology ,Introns ,ABO Blood-Group System ,Erythroid Cells ,Transcription (biology) ,ABO blood group system ,Humans ,Microsatellite ,Promoter Regions, Genetic ,Enhancer ,Gene ,Gene Deletion - Abstract
We developed a sequence-specific primer PCR (SSP-PCR) for detection of a 5.8-kb deletion (B(m) 5.8) involving an erythroid cell-specific regulatory element in intron 1 of the ABO blood group gene. Using this SSP-PCR, we performed genetic analysis of 382 individuals with Bm or ABm. The 5.8-kb deletion was found in 380 individuals, and disruption of the GATA motif in the regulatory element was found in one individual. Furthermore, a novel 3.0-kb deletion involving the element (B(m) 3.0) was demonstrated in the remaining individual. Comparisons of single-nucleotide polymorphisms and microsatellites in intron 1 between B(m) 5.8 and B(m) 3.0 suggested that these deletions occurred independently.
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- 2014
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39. Blood group B gene is barely expressed inin vitroerythroid culture of Bm-derived CD34+cells without an erythroid cell-specific regulatory element
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Keiko Takahashi, Makoto Uchikawa, Rie Sano, T. Kishida, Rieko Kubo, M. Nogawa, Kenichi Ogasawara, Junichi Tsukada, Akihiko Yokohama, Yoichiro Takahashi, Tamiko Nakajima, Yoshihiko Kominato, and H. Yamao
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CD34 ,Antigens, CD34 ,Biology ,ABO Blood-Group System ,chemistry.chemical_compound ,Erythroid Cells ,hemic and lymphatic diseases ,ABO blood group system ,Gene expression ,medicine ,Humans ,Promoter Regions, Genetic ,Enhancer ,Alleles ,Cells, Cultured ,Erythroid Precursor Cells ,Hematology ,General Medicine ,Molecular biology ,In vitro ,Hematopoiesis ,medicine.anatomical_structure ,RUNX1 ,chemistry ,Bone marrow ,Chromatin immunoprecipitation - Abstract
Background and Objectives Previously, a weak phenotype Am or Bm was assumed to be caused by a reduction of A or B gene expression in bone marrow cells, but not in mucus-secreting cells. However, ABO expression has not been examined in erythroid progenitor cells of Am or Bm individuals. Materials and Methods We carried out in vitro erythroid differentiation of CD34+ cells from peripheral blood of a Bm individual harbouring a 3·0-kb deletion including an erythroid cell-specific regulatory element, named the +5·8-kb site, in intron 1 of the human ABO blood group gene. Results During the in vitro differentiation of CD34+ cells from this Bm individual into erythroid cells, B-antigens were not detectable on the cultured cells by flow cytometric analysis, and allele-specific RT-PCR consistently detected the transcripts from the O allele, but not from the B allele. Moreover, chromatin immunoprecipitation assay demonstrated that both RUNX1 and GATA-2 or GATA-1 were bound to the +5·8-kb site in cultured erythroid cells expressing ABO. Conclusion It is likely that the +5·8-kb site enhances transcription from the ABO promoter in erythroid cells through binding of RUNX1 and GATA-2 or GATA-1.
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- 2014
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40. Reorganization of the surface geometry of hollow-fiber membranes using dip-coating and vapor-induced phase separation
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Tatsuo Maruyama, Ayane Shimomura, Yan Hao, Hideto Matsuyama, and Rie Sano
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Materials science ,technology, industry, and agriculture ,Synthetic membrane ,Analytical chemistry ,Membrane structure ,Filtration and Separation ,Biochemistry ,Dip-coating ,law.invention ,Membrane ,Chemical engineering ,law ,General Materials Science ,Fiber ,Semipermeable membrane ,Physical and Theoretical Chemistry ,Layer (electronics) ,Filtration - Abstract
Phase separation is one of the major methods to prepare a hollow-fiber membrane in industry. Despite the strong demands for the control of the inner membrane structure and surface geometry, it is still difficult to obtain the desired membrane structure and surface geometry simply by phase separation. In this work, we employed thermally induced phase separation, dip-coating and vapor-induced phase separation to prepare a hollow-fiber membrane with the controlled surface geometry and homogeneous inner structure, which led to high water permeability and high mechanical strength. First a poly(vinylidene fluoride) (PVDF) hollow-fiber membrane was prepared via thermally induced phase separation (TIPS) and then the outer surface of a membrane was dip-coated with another PVDF solution, followed by vapor induced phase separation (VIPS) to reorganize the outer surface of the membrane. The dip-coating and the VIPS treatment produced a highly porous mesh-like layer on the membrane surface. Filtration experiments using nanospheres and protein solutions revealed that the newly-formed layer served as a “separation layer” to determine the separation properties. The membrane pore-size was controlled to some extent by the conditions for the dip-coating and the VIPS treatment. The surface-reorganized membrane kept its intrinsic high water permeability and mechanical strength. In addition, the membrane exhibited improved low-fouling properties in the filtration of humic acid and protein solutions.
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- 2014
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41. Presence of nucleotide substitutions in transcriptional regulatory elements such as the erythroid cell-specific enhancer-like element and theABOpromoter in individuals with phenotypes A3and B3, respectively
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Junko Michino, A. Masuno, Rieko Kubo, Yoichiro Takahashi, Keiko Takahashi, Makoto Uchikawa, Shoichi Ito, Rie Sano, Yoshihiko Kominato, Kazumi Isa, Tamiko Nakajima, Kenichi Ogasawara, and Hatsue Tsuneyama
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Genetics ,chemistry.chemical_classification ,Base Sequence ,Intron ,Hematology ,General Medicine ,Biology ,Polymorphism, Single Nucleotide ,Phenotype ,Molecular biology ,ABO Blood-Group System ,Enhancer Elements, Genetic ,Erythroid Cells ,chemistry ,Transcription (biology) ,ABO blood group system ,Humans ,Nucleotide ,Promoter Regions, Genetic ,Enhancer ,Gene ,Genetic Association Studies ,K562 cells - Abstract
Background and objectives An erythroid cell-specific regulatory element, referred to as the +5.8-kb site, has been identified in the first intron of the human ABO blood group gene. Subsequent studies have revealed involvement of deletion or mutation at the site in phenotypes Am, Bm and ABm. We investigated the molecular mechanisms involved in the A3 and B3 phenotypes. Materials and methods Genomic DNAs were prepared from peripheral blood of seven A3 individuals and twelve B3 or AB3 individuals, and the nucleotide sequences were investigated using PCR and sequencing. Promoter assays were performed with K562 cells. Results Two single point-mutations at +5893 or +5909 in the site on the A-allele were found in A3 individuals, while promoter assays revealed decreased activity at the site as a result of each substitution. In two B3 individuals, a single point-mutation at −77 in the ABO promoter on the B-allele was found, and the substitution was demonstrated to reduce the promoter activity. Conclusion Nucleotide substitutions in the transcriptional regulatory elements such as the +5.8-kb site and the ABO promoter appear to decrease transcription from the A- and B-alleles, resulting in reduction in A- and B-antigen expression in A3 and B3, respectively.
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- 2014
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42. Preparation of Poly(vinyl chloride) Blend Hollow Fiber Membranes with Improved Antifouling Properties
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Rie Sano, Saeid Rajabzadeh, Yoshikage Ohmukai, Toru Ishigami, and Hideto Matsuyama
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Poly vinyl chloride ,Biofouling ,Membrane ,Materials science ,Hollow fiber membrane ,Fiber ,Composite material - Published
- 2014
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43. Evaluation of all non-synonymous single nucleotide polymorphisms (SNPs) in the genes encoding human deoxyribonuclease I and I-like 3 as a functional SNP potentially implicated in autoimmunity
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Tamiko Nakajima, Yoshihiko Kominato, Misuzu Ueki, Toshihiro Yasuda, Junko Fujihara, Haruo Takeshita, Kaori Kimura-Kataoka, Rie Sano, Reiko Iida, and Yasuyuki Kawai
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Genotype ,Autoimmunity ,Single-nucleotide polymorphism ,Biology ,Polymerase Chain Reaction ,Polymorphism, Single Nucleotide ,Biochemistry ,Loss of heterozygosity ,Chlorocebus aethiops ,Animals ,Deoxyribonuclease I ,Humans ,SNP ,Molecular Biology ,Gene ,Alleles ,Phylogeny ,Genetics ,Endodeoxyribonucleases ,Genetic heterogeneity ,Cell Biology ,Molecular biology ,Minor allele frequency ,Amino Acid Substitution ,COS Cells ,Polymorphism, Restriction Fragment Length - Abstract
The objectives of this study were to evaluate all the non-synonymous single nucleotide polymorphisms (SNPs) in the DNase I and DNase I-like 3 (1L3) genes potentially implicated in autoimmune diseases as a functional SNP in terms of alteration of the activity levels. We examined the genotype distributions of the 32 and 20 non-synonymous SNPs in DNASE1 and DNASE1L3, respectively, in three ethnic groups, and the effect of these SNPs on the DNase activities. Among a total of 44 and 25 SNPs including those characterized in our previous studies [Yasuda et al., Int J Biochem Cell Biol42 (2010) 1216-1225; Ueki et al. Electrophoresis32 (2012) 1465-1472], only four and one, respectively, exhibited genetic heterozygosity in one or all of the ethnic groups examined. On the basis of alterations in the activity levels resulting from the corresponding amino acid substitutions, 11 activity-abolishing and 11 activity-reducing SNPs in DNASE1 and two activity-abolishing and five activity-reducing SNPs in DNASE1L3 were confirmed as a functional SNP. Phylogenetic analysis showed that all of the amino acid residues in activity-abolishing SNPs were completely or well conserved in animal DNase I and 1L3 proteins. Although almost all non-synonymous SNPs in both genes that affected the catalytic activity showed extremely low genetic heterogeneity, it seems plausible that a minor allele of 13 activity-abolishing SNPs producing a loss-of-function variant in both the DNase genes would be a direct genetic risk factor for autoimmune diseases. These findings may have clinical implications in relation to the prevalence of autoimmune diseases.
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- 2013
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44. Use of postmortem computed tomography angiography to detect vascular injuries accompanying skull base fracture
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Takehiro Shimada, Hiroyuki Takei, Sachiko Awata, Keiko Takahashi, Rieko Kubo, Yoichiro Takahashi, Rie Sano, Susumu Kobayashi, Yoshihiko Kominato, Hikaru Kuninaka, Satoshi Hirasawa, and Hiroyuki Tokue
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medicine.medical_specialty ,Meatus ,Computed Tomography Angiography ,medicine.medical_treatment ,Autopsy ,Pathology and Forensic Medicine ,03 medical and health sciences ,Fractures, Bone ,0302 clinical medicine ,otorhinolaryngologic diseases ,medicine ,Humans ,030216 legal & forensic medicine ,Cardiopulmonary resuscitation ,Computed tomography angiography ,Skull Base ,Sphenoidal sinus ,medicine.diagnostic_test ,business.industry ,Middle Aged ,Vascular System Injuries ,Cerebral Angiography ,Issues, ethics and legal aspects ,Contrast medium ,medicine.anatomical_structure ,Angiography ,Female ,Radiology ,business ,030217 neurology & neurosurgery ,Cerebral angiography - Abstract
A 58-year-old woman who had presented for upper gastrointestinal barium examination accidently slipped from the movable bed, and her head became compressed between the end of the bed and the side wall. She suffered massive bleeding from her nose and ear followed by cardiac arrest, and subsequent attempts at cardiopulmonary resuscitation failed. A medicolegal autopsy was performed to reveal the cause of death, as part of the investigation of the accident. During the autopsy, postmortem cerebral CT angiography was carried out by injection of 5% gelatin-barium emulsion as a radiopaque contrast medium into the bilateral common carotid arteries, demonstrating transudation of the contrast medium into the right acoustic meatus and the sphenoidal sinus cavity. Considering that the body appeared anemic and that PMCTA suggested vascular injuries, the cause of death was definitively determined to be hemorrhagic shock due to injuries to the right internal carotid artery, accompanied by skull base fracture. Postmortem CT angiography played an important role in confirming that the vascular injuries had been responsible for the bleeding, as the lesions could not be fully confirmed by native CT or macroscopic examination.
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- 2016
45. Histone deacetylase inhibitors suppress ABO transcription in vitro, leading to reduced expression of the antigens
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Yoichiro, Takahashi, Rieko, Kubo, Rie, Sano, Tamiko, Nakajima, Keiko, Takahashi, Momoko, Kobayashi, Hiroshi, Handa, Junichi, Tsukada, and Yoshihiko, Kominato
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Histone Deacetylase Inhibitors ,Transcription, Genetic ,Down-Regulation ,Humans ,K562 Cells ,ABO Blood-Group System ,Epigenesis, Genetic - Abstract
The ABO system is of fundamental importance in the fields of transfusion and transplantation and has apparent associations with certain diseases, including cardiovascular disorders. ABO expression is reduced in the late phase of erythroid differentiation in vitro, whereas histone deacetylase inhibitors (HDACIs) are known to promote cell differentiation. Therefore, whether or not HDACIs could reduce the amount of ABO transcripts and A or B antigens is an intriguing issue.Quantitative polymerase chain reactions were carried out for the ABO transcripts in erythroid-lineage K562 and epithelial-lineage KATOIII cells after incubation with HDACIs, such as sodium butyrate, panobinostat, vorinostat, and sodium valproate. Flow cytometric analysis was conducted to evaluate the amounts of antigen in KATOIII cells treated with panobinostat. Quantitative chromatin immunoprecipitation (ChIP) assays and luciferase assays were performed on both cell types to examine the mechanisms of ABO suppression.HDACIs reduced the ABO transcripts in both K562 and KATOIII cells, with panobinostat exerting the most significant effect. Flow cytometric analysis demonstrated a decrease in B-antigen expression on panobinostat-treated KATOIII cells. ChIP assays indicated that panobinostat altered the modification of histones in the transcriptional regulatory regions of ABO, and luciferase assays demonstrated reduced activity of these elements.ABO transcription seems to be regulated by an epigenetic mechanism. Panobinostat appears to suppress ABO transcription, reducing the amount of antigens on the surface of cultured cells.
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- 2016
46. Association of a single-nucleotide polymorphism (rs6180) in GHR gene with plural tissue weight
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Rie Sano, Haruo Takeshita, Kaori Kimura-Kataoka, Yoshihiko Kominato, Toshihiro Yasuda, and Junko Fujihara
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Genetics ,Adult ,Aged, 80 and over ,Male ,Association (object-oriented programming) ,Single-nucleotide polymorphism ,Growth hormone receptor ,Receptors, Somatotropin ,Biology ,Middle Aged ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Humans ,Female ,030216 legal & forensic medicine ,Gene ,Plural ,Aged - Published
- 2016
47. A case of sudden unexpected infant death involving a homozygotic twin with the thermolabile CPT2 variant, accompanied by rotavirus infection and treatment with an antibiotic containing pivalic acid
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Keiko Takahashi, Rieko Kubo, Takashi Ishige, Rie Sano, Yoshihiko Kominato, Tamiko Nakajima, Haruo Takeshita, and Yoichiro Takahashi
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0301 basic medicine ,Male ,Pivalic acid ,medicine.drug_class ,Antibiotics ,Twins ,Physiology ,Biology ,Virus ,Rotavirus Infections ,Pathology and Forensic Medicine ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,medicine ,Humans ,Carnitine ,Thermolabile ,Pentanoic Acids ,Beta oxidation ,Cause of death ,Carnitine O-Palmitoyltransferase ,Homozygote ,Infant ,Infant mortality ,Anti-Bacterial Agents ,Issues, ethics and legal aspects ,030104 developmental biology ,Biochemistry ,chemistry ,Autopsy ,030217 neurology & neurosurgery ,Sudden Infant Death ,medicine.drug - Abstract
We investigated a case of sudden unexpected death involving a 22-month-old male homozygotic twin infant. After both of the twins had suffered from gastroenteritis, one was found dead in his bed, but his brother survived and has since been healthy. Notably, only the deceased had been treated with an antibiotic containing pivalic acid, which may sometimes cause hypocarnitinemia. Postmortem computed tomography and medicolegal autopsy demonstrated severe liver steatosis, and subsequent genetic analysis revealed that the twin had the thermolabile variant of carnitine palmitoyl transferase 2 (CPT2). On the basis of these facts, we concluded that the cause of death had been fatty acid oxidation deficiency accelerated by an antibiotic containing pivalic acid and virus infection in this infant harboring the thermolabile genetic variant of CPT2. Although each factor alone was not fatal, their combination appeared to have resulted in sudden unexpected infant death.
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- 2016
48. Fucosylated Glycans in α1-Acid Glycoprotein for Monitoring Treatment Outcomes and Prognosis of Cancer Patients
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Ryo Takahashi, Hiroyuki Kuwano, Abby R. Saniabadi, Takayuki Asao, Takehiko Yokobori, Akira Mogi, Rie Sano, and Shin Yazawa
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0301 basic medicine ,Oncology ,Pathology ,Glycosylation ,Adjuvant Chemotherapy ,medicine.medical_treatment ,Cancer Treatment ,Glycobiology ,lcsh:Medicine ,Biochemistry ,Diagnostic Radiology ,Metastasis ,Neoplasms ,Medicine and Health Sciences ,Postoperative Period ,lcsh:Science ,Tomography ,Multidisciplinary ,Pharmaceutics ,Radiology and Imaging ,Standard treatment ,Orosomucoid ,Prognosis ,Treatment Outcome ,Carbohydrate Sequence ,Biomarker (medicine) ,Research Article ,Clinical Oncology ,medicine.medical_specialty ,Imaging Techniques ,Neuroimaging ,Research and Analysis Methods ,03 medical and health sciences ,Drug Therapy ,Polysaccharides ,Diagnostic Medicine ,Internal medicine ,Biomarkers, Tumor ,Cancer Detection and Diagnosis ,medicine ,Humans ,Chemotherapy ,Fucose ,Monitoring, Physiologic ,Glycoproteins ,Tumor marker ,business.industry ,lcsh:R ,Case-control study ,Biology and Life Sciences ,Cancer ,medicine.disease ,Survival Analysis ,Computed Axial Tomography ,030104 developmental biology ,Case-Control Studies ,lcsh:Q ,Clinical Medicine ,business ,Biomarkers ,Chemoradiotherapy ,Neuroscience - Abstract
One standard treatment option for advanced-stage cancer is surgical resection of malignant tumors following by adjuvant chemotherapy and chemoradiotherapy. Additionally, neoadjuvant chemotherapy may be applied if required. During the time course of treatments, patients are generally followed by computed tomography (CT) surveillance, and by tumor marker diagnosis. However, currently, early evidence of recurrence and/or metastasis of tumors with a clinically relevant biomarker remains a major therapeutic challenge. In particular, there has been no validated biomarker for predicting treatment outcomes in therapeutic settings. Recently, we have looked at glycoforms of serum α1-acid glycoprotein (AGP) by using a crossed affinoimmunoelectrophoresis with two lectins and an anti-AGP antibody. The primary glycan structures of AGP were also analyzed by a mass spectrometer and a novel software in a large number of patients with various cancers. Accordingly, the relative abundance of α1,3fucosylated glycans in AGP (FUCAGP) was found to be significantly high in cancer patients as compared with the healthy controls. Further, strikingly elevated levels of FUCAGP were found in patients with poor prognosis but not in patients with good prognosis. In the current study, levels of FUCAGP in serum samples from various cancer patients were analyzed and 17 patients including 13 who had undergone chemotherapy were followed for several years post operation. FUCAGP level determined diligently by using a mass spectrometer was found to change along with disease prognosis as well as with responses to treatments, in particular, to various chemotherapies. Therefore, FUCAGP levels measured during following-up of the patients after operation appeared to be clinically relevant biomarker of treatment intervention.
- Published
- 2016
49. Genetic and expression analysis of SNPs in the human deoxyribonuclease II: SNPs in the promoter region reduce its in vivo activity through decreased promoter activity
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Hideaki Kato, Misuzu Ueki, Toshihiro Yasuda, Tomoko Toga, Reiko Iida, Rie Sano, Rei-Ichiro Ono, Tamiko Nakajima, Junko Fujihara, Kaori Kimura-Kataoka, Yoshihiko Kominato, Haruo Takeshita, and Yosuke Otsuka
- Subjects
dbSNP ,Genotyping Techniques ,Clinical Biochemistry ,Single-nucleotide polymorphism ,Biology ,Transfection ,Polymerase Chain Reaction ,Polymorphism, Single Nucleotide ,Biochemistry ,Linkage Disequilibrium ,Analytical Chemistry ,Arthritis, Rheumatoid ,Genes, Reporter ,Gene expression ,Genotype ,Humans ,Deoxyribonuclease II ,Luciferases ,Promoter Regions, Genetic ,Gene ,Genetics ,Chi-Square Distribution ,Endodeoxyribonucleases ,Racial Groups ,Haplotype ,Promoter ,Hep G2 Cells ,Molecular biology ,Amino Acid Substitution ,Haplotypes ,Electrophoresis, Polyacrylamide Gel - Abstract
Five SNPs in the human DNase II gene have been reported to be associated with rheumatoid arthritis (RA). Genotype and haplotype analysis of 14 SNPs, nine SNPs of which reported in the NCBI dbSNP database in addition to these five SNPs, was performed in healthy subjects. The enzymatic activities of the amino acid substituted DNase II corresponding to each SNP and serum DNase II in healthy Japanese, and promoter activities derived from each haplotype of the RA-related SNPs were measured. Significant correlations between genotype in each RA-related SNP and enzymatic activity levels were found; alleles associated with RA exhibited a reduction in serum DNase II activity. Furthermore, the promoter activities of each reporter construct corresponding to predominant haplotypes in three SNPs in the promoter region of the gene exhibited significant correlation with levels of serum DNase II activity. These findings indicate these three SNPs could alter the promoter activity of DNASE2, leading to a decline in DNase II activity in the serum through gene expression. Since the three SNPs in the promoter region of the DNase II gene could affect in vivo DNase II activity through reduction of the promoter activity, it is feasible to identify these SNPs susceptible to RA.
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- 2012
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50. Expression of ABO blood-group genes is dependent upon an erythroid cell–specific regulatory element that is deleted in persons with the Bm phenotype
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Junichi Tsukada, Kazumi Isa, Rieko Kubo, Akihiko Yokohama, Keiko Takahashi, Takayuki Maruhashi, Tamiko Nakajima, Kazuto Ito, Rie Sano, Kenichi Ogasawara, Makoto Uchikawa, Toshihiro Yasuda, Haruo Takeshita, and Yoshihiko Kominato
- Subjects
Male ,Transcription, Genetic ,Immunology ,Biology ,Biochemistry ,ABO Blood-Group System ,Erythroid Cells ,hemic and lymphatic diseases ,ABO blood group system ,Humans ,GATA1 Transcription Factor ,Electrophoretic mobility shift assay ,Allele ,Gene ,Transcription factor ,Alleles ,Regulation of gene expression ,Intron ,Cell Biology ,Hematology ,Transfection ,Molecular biology ,Introns ,Enhancer Elements, Genetic ,Phenotype ,Gene Expression Regulation ,Female ,K562 Cells - Abstract
The ABO blood group is of great importance in blood transfusion and organ transplantation. However, the mechanisms regulating human ABO gene expression remain obscure. On the basis of DNase I–hypersensitive sites in and upstream of ABO in K562 cells, in the present study, we prepared reporter plasmid constructs including these sites. Subsequent luciferase assays indicated a novel positive regulatory element in intron 1. This element was shown to enhance ABO promoter activity in an erythroid cell–specific manner. Electrophoretic mobility–shift assays demonstrated that it bound to the tissue-restricted transcription factor GATA-1. Mutation of the GATA motifs to abrogate binding of this factor reduced the regulatory activity of the element. Therefore, GATA-1 appears to be involved in the cell-specific activity of the element. Furthermore, we found that a partial deletion in intron 1 involving the element was associated with Bm phenotypes. Therefore, it is plausible that deletion of the erythroid cell–specific regulatory element could down-regulate transcription in the Bm allele, leading to reduction of B-antigen expression in cells of erythroid lineage, but not in mucus-secreting cells. These results support the contention that the enhancer-like element in intron 1 of ABO has a significant function in erythroid cells.
- Published
- 2012
- Full Text
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