33 results on '"Reyes Gil M"'
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2. Unpredictable Blood Product Usage in Orthotropic Liver Transplantation: A Foregone Conclusion or A Problem Solved by Artificial Intelligence?
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Gosnell, H L, primary, Barouqa, M, additional, Rashidi, H, additional, and Reyes Gil, M, additional
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- 2023
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3. Preface
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Shaz, B.H., primary, Hillyer, C.D., additional, and Reyes Gil, M., additional
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- 2019
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4. (62) - Sildenafil Modifies Platelet Activation and Reduces Mediators of Vascular Remodeling During Durable Left Ventricular Assist Device Support: A Double-Blind, Placebo-Controlled, Randomized Study
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Farooq, M., Patel, S., Reyes Gil, M., Goldstein, D., Kizer, J., Yazdanbakhsh, K., and Jorde, U.
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- 2024
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5. 1010 Anemia in hidradenitis suppurativa, hepcidin as a diagnostic tool
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Ghias, M.H., primary, Shaw, F.M., additional, Cameron, S., additional, Soliman, Y.S., additional, Kutner, A.J., additional, Reyes Gil, M., additional, and Cohen, S.R., additional
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- 2019
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6. Hemolysis and Von Willebrand Factor Levels During Continuous Flow Left Ventricular Assist Device Support
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Saeed, O., primary, Rangasamy, S., additional, Luke, A., additional, Patel, S.R., additional, Shin, J., additional, Sims, D.B., additional, Reyes Gil, M., additional, Goldstein, D.J., additional, Slepian, M.J., additional, Billett, H.H., additional, and Jorde, U., additional
- Published
- 2017
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7. Sildenafil Reduces Risk of Ischemic Stroke and Pump Thrombosis with Ongoing Low Level Hemolysis During Heart Mate II Support
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Saeed, O., primary, Rangasamy, S., additional, Luke, A., additional, Patel, S.P., additional, Sims, D.B., additional, Shin, J., additional, Reyes Gil, M., additional, Slepian, M.J., additional, Billett, H.H., additional, Goldstein, D.J., additional, and Jorde, U.P., additional
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- 2017
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8. (643) - Hemolysis and Von Willebrand Factor Levels During Continuous Flow Left Ventricular Assist Device Support
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Saeed, O., Rangasamy, S., Luke, A., Patel, S.R., Shin, J., Sims, D.B., Reyes Gil, M., Goldstein, D.J., Slepian, M.J., Billett, H.H., and Jorde, U.
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- 2017
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9. (274) - Sildenafil Reduces Risk of Ischemic Stroke and Pump Thrombosis with Ongoing Low Level Hemolysis During Heart Mate II Support
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Saeed, O., Rangasamy, S., Luke, A., Patel, S.P., Sims, D.B., Shin, J., Reyes Gil, M., Slepian, M.J., Billett, H.H., Goldstein, D.J., and Jorde, U.P.
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- 2017
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10. Venous thromboembolism in the era of machine learning and artificial intelligence in medicine.
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Reyes Gil M, Pantanowitz J, and Rashidi HH
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- Humans, Venous Thromboembolism therapy, Venous Thromboembolism diagnosis, Machine Learning, Artificial Intelligence
- Abstract
In this review, we embark on a comprehensive exploration of venous thromboembolism (VTE) in the context of medical history and its current practice within medicine. We delve into the landscape of artificial intelligence (AI), exploring its present utility and envisioning its transformative roles within VTE management, from prevention to screening and beyond. Central to our discourse is a forward-looking perspective on the integration of AI within VTE in medicine, advocating for rigorous study design, robust validation processes, and meticulous statistical analysis to gauge the efficacy of AI applications. We further illuminate the potential of large language models and generative AI in revolutionizing VTE care, while acknowledging their inherent limitations and proposing innovative solutions to overcome challenges related to data availability and integrity, including the strategic use of synthetic data. The critical importance of navigating ethical, legal, and privacy concerns associated with AI is underscored, alongside the imperative for comprehensive governance and policy frameworks to regulate its deployment in VTE treatment. We conclude on a note of cautious optimism, where we highlight the significance of proactively addressing the myriad challenges that accompany the advent of AI in healthcare. Through diligent design, stringent validation, extensive education, and prudent regulation, we can harness AI's potential to significantly enhance our understanding and management of VTE. As we stand on the cusp of a new era, our commitment to these principles will be instrumental in ensuring that the promise of AI is fully realized within the realm of VTE care., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Hooman H. Rashidi is the co-inventor of the Synthetic Tabular Neural Generator (STNG) platform, (STNG is the Intellectual Property of the Cleveland Clinic). Hooman H. Rashidi is also co-inventor of MiLO and co-founder of the University of California start-up MILO-ML, Inc. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)
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- 2024
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11. The role of interleukin-6 in anemia associated with hidradenitis suppurativa.
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Babbush Graber K, Ghias MH, Andriano TM, Cohen JV, Zhu TR, Hosgood HD, Reyes Gil M, and Cohen SR
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- Humans, Male, Female, Adult, Middle Aged, Hidradenitis Suppurativa complications, Interleukin-6 blood, Anemia etiology, Anemia blood
- Abstract
Competing Interests: Conflicts of interest None disclosed.
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- 2024
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12. Prothrombotic autoantibodies targeting platelet factor 4/polyanion are associated with pediatric cerebral malaria.
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Vera IM, Kessler A, Harawa V, Ahmadu A, Keller TE, Ray ST, Taylor TE, Rogerson SJ, Mandala WL, Reyes Gil M, Seydel KB, and Kim K
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- Humans, Female, Male, Child, Child, Preschool, Infant, Polyelectrolytes, Thrombosis immunology, Thrombosis blood, Malaria, Cerebral immunology, Malaria, Cerebral blood, Autoantibodies blood, Autoantibodies immunology, Platelet Factor 4 immunology, Platelet Factor 4 blood
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BACKGROUNDFeatures of consumptive coagulopathy and thromboinflammation are prominent in cerebral malaria (CM). We hypothesized that thrombogenic autoantibodies contribute to a procoagulant state in CM.METHODSPlasma from children with uncomplicated malaria (UM) (n = 124) and CM (n = 136) was analyzed by ELISA for a panel of 8 autoantibodies including anti-platelet factor 4/polyanion (anti-PF4/P), anti-phospholipid, anti-phosphatidylserine, anti-myeloperoxidase, anti-proteinase 3, anti-dsDNA, anti-β-2-glycoprotein I, and anti-cardiolipin. Plasma samples from individuals with nonmalarial coma (NMC) (n = 49) and healthy controls (HCs) (n = 56) were assayed for comparison. Associations with clinical and immune biomarkers were determined using univariate and logistic regression analyses.RESULTSMedian anti-PF4/P and anti-PS IgG levels were elevated in individuals with malaria infection relative to levels in HCs (P < 0.001) and patients with NMC (PF4/P: P < 0.001). Anti-PF4/P IgG levels were elevated in children with CM (median = 0.27, IQR: 0.19-0.41) compared with those with UM (median = 0.19, IQR: 0.14-0.22, P < 0.0001). Anti-PS IgG levels did not differ between patients with UM and those with CM (P = 0.39). When patients with CM were stratified by malaria retinopathy (Ret) status, the levels of anti-PF4/P IgG correlated negatively with the peripheral platelet count in patients with Ret+ CM (Spearman's rho [Rs] = 0.201, P = 0.04) and associated positively with mortality (OR = 15.2, 95% CI: 1.02-275, P = 0.048). Plasma from patients with CM induced greater platelet activation in an ex vivo assay relative to plasma from patients with UM (P = 0.02), and the observed platelet activation was associated with anti-PF4/P IgG levels (Rs= 0.293, P = 0.035).CONCLUSIONSThrombosis mediated by elevated anti-PF4/P autoantibodies may be one mechanism contributing to the clinical complications of CM.
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- 2024
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13. Performance evaluation of heparin-induced platelet aggregation vs serotonin release assay.
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Barouqa M, Matta M, and Reyes-Gil M
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- Humans, Platelet Aggregation, Serotonin, Enzyme-Linked Immunosorbent Assay, Anticoagulants adverse effects, Heparin adverse effects, Thrombocytopenia chemically induced, Thrombocytopenia diagnosis
- Abstract
Objectives: Heparin-induced thrombocytopenia (HIT) is a rare but life-threatening condition that requires rapid diagnosis for proper management. Laboratory testing should only be performed on patients with intermediate- or high-risk pretest probability. The platelet factor 4 (PF4) enzyme-linked immunosorbent assay (ELISA) is the screening test that should be confirmed by higher specificity testing such as the heparin-induced platelet aggregation (HIPA) or the serotonin release assay (SRA). This study aims to evaluate the performance of the HIPA in comparison to the SRA, establish cutoffs of the PF4 ELISA to predict positivity for HIPA/SRA, and study the mortality rate between patients with suspected HIT confirmed as HIT positive vs negative., Methods: All positive PF4 ELISA cases with confirmatory HIPA and SRA testing were included. As the SRA was considered the gold standard, the HIPA performance was evaluated in comparison to SRA before and after the implementation of a new standardized interpretation guide in 2022. The mortality of these cases was also documented by chart reviews., Results: In total, 232 cases with positive or indeterminate anti-PF4 IgG ELISA had confirmatory testing with HIPA and SRA. The sensitivity of the HIPA improved from 55.4% in 2018 to 2021 to 73.8% in 2022. The specificity remained similarly high in 2018 to 2021 vs 2022 (94.9% vs 87.5%). The negative predictive value (NPV) improved in 2022. The PF4 optical density cutoff to predict the positivity of SRA was 0.85 vs 1.47 to predict the positivity of HIPA but decreased to 0.83 when combining HIPA and/or SRA. There was no significant difference in mortality between patients with suspected HIT confirmed positive vs negative., Conclusions: Although the HIPA has a lower sensitivity than the SRA, the new standardized interpretation guide improved its sensitivity and NPV in 2022. Future improvements are needed to use the HIPA as a stand-alone confirmatory test with the goal to shorten hospital length of stay and expedite proper anticoagulation management., (© The Author(s) 2023. Published by Oxford University Press on behalf of American Society for Clinical Pathology. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
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- 2024
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14. Diagnosing TMAs by automated red cell morphology analyses.
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Billett HH and Reyes Gil M
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- 2023
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15. Machine learning in the coagulation and hemostasis arena: an overview and evaluation of methods, review of literature, and future directions.
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Rashidi HH, Bowers KA, and Reyes Gil M
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- Humans, Machine Learning, Blood Coagulation, Forecasting, Artificial Intelligence, Decision Support Systems, Clinical
- Abstract
Artificial Intelligence and machine-learning (ML) studies are increasingly populating the life science space and some have also started to integrate certain clinical decision support tasks. However, most of the activities within this space understandably remain within the investigational domain and are not yet ready for broad use in healthcare. In short, artificial intelligence/ML is still in an infancy stage within the healthcare arena, and we are nowhere near reaching its full potential. Various factors have contributed to this slow adoption rate within healthcare, which include but are not limited to data accessibility and integrity issues, paucity of specialized data science personnel, certain regulatory measures, and various voids within the ML operational platform domain. However, these obstacles and voids have also introduced us to certain opportunities to better understand this arena as we fully embark on this new journey, which undoubtedly will become a major part of our future patient care activities. Considering the aforementioned needs, this review will be concentrating on various ML studies within the coagulation and hemostasis space to better understand their shared study needs, findings, and limitations. However, the ML needs within this subspecialty of medicine are not unique and most of these needs, voids, and limitations also apply to the other medical disciplines. Therefore, this review will not only concentrate on introducing the audience to ML concepts and ML study design elements but also on where the future within this arena in medicine is leading us., (Copyright © 2022 International Society on Thrombosis and Haemostasis. Published by Elsevier Inc. All rights reserved.)
- Published
- 2023
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16. Identifying Neutrophil Extracellular Traps (NETs) in Blood Samples Using Peripheral Smear Autoanalyzers.
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Fedorov K, Barouqa M, Yin D, Kushnir M, Billett HH, and Reyes Gil M
- Abstract
Neutrophil Extracellular Traps (NETs) are large neutrophil-derived structures composed of decondensed chromatin, cytosolic, and granule proteins. NETs play an important role in fighting infection, inflammation, thrombosis, and tumor progression processes, yet their fast and reliable identification has been challenging. Smudge cells (SCs) are a subcategory of white cells identified by CellaVision
® , a hematology autoanalyzer routinely used in clinical practice that uses digital imaging to generate "manual" differentials of peripheral blood smears. We hypothesize that a proportion of cells identified in the SC category by CellaVision® Hematology Autoanalyzers are actually NETs. We demonstrate that NET-like SCs are not present in normal blood samples, nor are they an artifact of smear preparation. NET-like SCs stain positive for neutrophil markers such as myeloperoxidase, leukocyte alkaline phosphatase, and neutrophil elastase. On flow cytometry, cells from samples with high percent NET-like SCs that are positive for surface DNA are also positive for CD45, myeloperoxidase and markers of neutrophil activation and CD66b. Samples with NET-like SCs have a strong side fluorescent (SFL) signal on the white count and nucleated red cells (WNR) scattergram, representing cells with high nucleic acid content. When compared to patients with low percent SCs, those with a high percentage of SCs have a significantly higher incidence of documented bacterial and viral infections. The current methodology of NET identification is time-consuming, complicated, and cumbersome. In this study, we present data supporting identification of NETs by CellaVision® , allowing for easy, fast, cost-effective, and high throughput identification of NETs that is available in real time and may serve as a positive marker for a bacterial or viral infections.- Published
- 2023
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17. Outcomes With Direct and Indirect Thrombin Inhibition During Extracorporeal Membrane Oxygenation for COVID-19.
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Saeed O, Farooq M, Kuntzman M, Patel SR, Stein LH, Cavarocchi N, Silvestry S, Reyes Gil M, Billett HH, Jorde UP, and Goldstein DJ
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- Adult, Humans, Heparin therapeutic use, Thrombin, Retrospective Studies, Anticoagulants therapeutic use, Hemorrhage etiology, Extracorporeal Membrane Oxygenation adverse effects, COVID-19 therapy, Stroke
- Abstract
Anticoagulation during extracorporeal membrane oxygenation (ECMO) for Coronovirus Disease 2019 (COVID-19) can be performed by direct or indirect thrombin inhibitors but differences in outcomes with these agents are uncertain. A retrospective, multicenter study was conducted. All consecutive adult patients with COVID-19 placed on ECMO between March 1, 2020 and April 30, 2021 in participating centers, were included. Patients were divided in groups receiving either a direct thrombin inhibitor (DTI) or an indirect thrombin inhibitor such as unfractionated heparin (UFH). Overall, 455 patients with COVID-19 from 17 centers were placed on ECMO during the study period. Forty-four patients did not receive anticoagulation. Of the remaining 411 patients, DTI was used in 160 (39%) whereas 251 (61%) received UFH. At 90-days, in-hospital mortality was 50% (DTI) and 61% (UFH), adjusted hazard ratio: 0.81, 95% confidence interval (CI): 0.49-1.32. Deep vein thrombosis [adjusted odds ratio (aOR): 2.60, 95% CI: 0.90-6.65], ischemic (aOR: 1.58, 95% CI: 0.18-14.0), and hemorrhagic (aOR:1.22, 95% CI: 0.39-3.87) stroke were similar with DTI in comparison to UFH. Bleeding requiring transfusion was lower in patients receiving DTI (aOR: 0.40, 95% CI: 0.18-0.87). Anticoagulants that directly inhibit thrombin are associated with similar in-hospital mortality, stroke, and venous thrombosis and do not confer a higher risk of clinical bleeding in comparison to conventional heparin during ECMO for COVID-19., Competing Interests: Disclosure: The authors have no conflicts of interest to report., (Copyright © ASAIO 2022.)
- Published
- 2022
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18. Indeterminate serotonin release assays are associated with a high mortality rate.
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Jindal S, Leyton C, Cohen F, Reyes Gil M, and Billett H
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Background: The serotonin release assay (SRA) is considered the gold standard for diagnosis of heparin-induced thrombocytopenia (HIT). Although the SRA holds high sensitivity and specificity when results are definitive, up to 10% of samples from patients with suspected HIT yield "indeterminate" results., Objectives: We aimed to study the clinical course of patients with indeterminate results., Methods: We conducted a cohort analysis of 2056 patients that underwent SRA testing., Results: Of 2056 total patients, 152 (7.4%) had indeterminate assays. The prevalence of thrombocytopenia <50,000 × 10
6 was higher in patients with an indeterminate or positive SRA, compared with a negative SRA (39.5% and 40.0% vs. 27.5%, p < 4.0 × 10-4 ). Patients with an indeterminate SRA were more likely to have been treated in the intensive care unit than patients with a positive SRA (93.3% vs. 73.7%, p = 0.03). The mean thrombocytopenia, timing of platelet count fall, thrombosis or other sequelae, and other causes for thrombocytopenia score in patients with indeterminate SRA was 2.9, corresponding to a HIT probability of <5%. Of 152 patients, 128 (78.9%) had heparin-PF4 optical densities (ODs) below 0.60 OD, whereas four patients (2.6%) had ODs above 2.00 OD. Inpatient mortality was significant in patients with indeterminate SRAs compared with positive or negative SRA (49.3% vs. 21.1% and 27.2%, p < 2.4 × 10-10 )., Conclusions: Our data suggest that an indeterminate SRA may signal an in vivo platelet activation process that is not related to heparin but is associated with increased mortality., (© 2022 The Authors. Research and Practice in Thrombosis and Haemostasis published by Wiley Periodicals LLC on behalf of International Society on Thrombosisand Haemostasis (ISTH).)- Published
- 2022
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19. Hydroxyurea and fetal hemoglobin effect on leg ulcers in patients with sickle cell disease.
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Tolu SS, Crouch A, Choi J, Gao Q, Reyes-Gil M, Ogu UO, Vinces G, and Minniti CP
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- Adult, Anemia, Sickle Cell blood, Anemia, Sickle Cell complications, Antisickling Agents adverse effects, Female, Humans, Hydroxyurea adverse effects, Incidence, Leg Ulcer blood, Male, Middle Aged, Risk Factors, Young Adult, Anemia, Sickle Cell drug therapy, Antisickling Agents therapeutic use, Fetal Hemoglobin analysis, Hydroxyurea therapeutic use, Leg Ulcer etiology
- Abstract
The presence of leg ulcers in individuals with sickle cell disease often represents an early sign of vasculopathy and future end organ damage. Pathophysiological mechanisms of formation and evolution of leg ulcers are poorly understood; nevertheless, HbF has been associated with lower incidence of leg ulcers, while hydroxyurea has been correlated with high risk of leg ulcers. As a result, there is hesitation regarding hydroxyurea use in patients with SCD and leg ulcers. In this study, we aim to define (1) a target of HbF that offers protection against leg ulcer development and (2) the impact of hydroxyurea therapy on leg ulcer prevalence. Our study demonstrated that in order to reduce leg ulcer incidence by one-third, a HbF > 25% is needed, a threshold not commonly reached and maintained in the adult SCD population. Importantly, leg ulcer incidence appears to be independent of HU use (p = 0.50). Our interpretation of this data is that the use of HU in a patient with SCD and leg ulcers should be guided by a careful assessment of risks and benefits of this therapeutic modality., (© 2022. This is a U.S. government work and not under copyright protection in the U.S.; foreign copyright protection may apply.)
- Published
- 2022
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20. A Histoplasma capsulatum Lipid Metabolic Map Identifies Antifungal Targets.
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Zamith-Miranda D, Heyman HM, Burnet MC, Couvillion SP, Zheng X, Munoz N, Nelson WC, Kyle JE, Zink EM, Weitz KK, Bloodsworth KJ, Clair G, Zucker JD, Teuton JR, Payne SH, Kim YM, Reyes Gil M, Baker ES, Bredeweg EL, Nosanchuk JD, and Nakayasu ES
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- Fatty Acids biosynthesis, Fungal Proteins genetics, Fungal Proteins metabolism, Histoplasma growth & development, Histoplasmosis microbiology, Humans, Lipidomics, Proteomics, Sphingolipids biosynthesis, Histoplasma genetics, Histoplasma metabolism, Lipid Metabolism
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Lipids play a fundamental role in fungal cell biology, being essential cell membrane components and major targets of antifungal drugs. A deeper knowledge of lipid metabolism is key for developing new drugs and a better understanding of fungal pathogenesis. Here, we built a comprehensive map of the Histoplasma capsulatum lipid metabolic pathway by incorporating proteomic and lipidomic analyses. We performed genetic complementation and overexpression of H. capsulatum genes in Saccharomyces cerevisiae to validate reactions identified in the map and to determine enzymes responsible for catalyzing orphan reactions. The map led to the identification of both the fatty acid desaturation and the sphingolipid biosynthesis pathways as targets for drug development. We found that the sphingolipid biosynthesis inhibitor myriocin, the fatty acid desaturase inhibitor thiocarlide, and the fatty acid analog 10-thiastearic acid inhibit H. capsulatum growth in nanomolar to low-micromolar concentrations. These compounds also reduced the intracellular infection in an alveolar macrophage cell line. Overall, this lipid metabolic map revealed pathways that can be targeted for drug development. IMPORTANCE It is estimated that 150 people die per hour due to the insufficient therapeutic treatments to combat fungal infections. A major hurdle to developing antifungal therapies is the scarce knowledge on the fungal metabolic pathways and mechanisms of virulence. In this context, fungal lipid metabolism is an excellent candidate for developing drugs due to its essential roles in cellular scaffolds, energy storage, and signaling transductors. Here, we provide a detailed map of Histoplasma capsulatum lipid metabolism. The map revealed points of this fungus lipid metabolism that can be targeted for developing antifungal drugs.
- Published
- 2021
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21. Silencing VEGFR-2 Hampers Odontoblastic Differentiation of Dental Pulp Stem Cells.
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Janebodin K, Chavanachat R, Hays A, and Reyes Gil M
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Dental pulp stem cells (DPSCs) are a source of postnatal stem cells essential for maintenance and regeneration of dentin and pulp tissues. Previous in vivo transplantation studies have shown that DPSCs are able to give rise to odontoblast-like cells, form dentin/pulp-like structures, and induce blood vessel formation. Importantly, dentin formation is closely associated to blood vessels. We have previously demonstrated that DPSC-induced angiogenesis is VEGFR-2-dependent. VEGFR-2 may play an important role in odontoblast differentiation of DPSCs, tooth formation and regeneration. Nevertheless, the role of VEGFR-2 signaling in odontoblast differentiation of DPSCs is still not well understood. Thus, in this study we aimed to determine the role of VEGFR-2 in odontoblast differentiation of DPSCs by knocking down the expression of VEGFR-2 in DPSCs and studying their odontoblast differentiation capacity in vitro and in vivo . Isolation and characterization of murine DPSCs was performed as previously described. DPSCs were induced by VEGFR-2 shRNA viral vectors transfection (MOI = 10:1) to silence the expression of VEGFR-2. The GFP+ expression in CopGFP DPSCs was used as a surrogate to measure the efficiency of transfection and verification that the viral vector does not affect the expression of VEGFR-2. The efficiency of viral transfection was shown by significant reduction in the levels of VEGFR-2 based on the Q-RT-PCR and immunofluorescence in VEGFR-2 knockdown DPSCs, compared to normal DPSCs. VEGFR-2 shRNA DPSCs expressed not only very low level of VEGFR-2, but also that of its ligand, VEGF-A, compared to CopGFP DPSCs in both transcriptional and translational levels. In vitro differentiation of DPSCs in osteo-odontogenic media supplemented with BMP-2 (100 ng/ml) for 21 days demonstrated that CopGFP DPSCs, but not VEGFR-2 shRNA DPSCs, were positive for alkaline phosphatase (ALP) staining and formed mineralized nodules demonstrated by positive Alizarin Red S staining. The expression levels of dentin matrix proteins, dentin matrix protein-1 ( Dmp1 ), dentin sialoprotein ( Dspp ), and bone sialoprotein ( Bsp ), were also up-regulated in differentiated CopGFP DPSCs, compared to those in VEGFR-2 shRNA DPSCs, suggesting an impairment of odontoblast differentiation in VEGFR-2 shRNA DPSCs. In vivo subcutaneous transplantation of DPSCs with hydroxyapatite (HAp/TCP) for 5 weeks demonstrated that CopGFP DPSCs were able to differentiate into elongated and polarized odontoblast-like cells forming loose connective tissue resembling pulp-like structures with abundant blood vessels, as demonstrated by H&E, Alizarin Red S, and dentin matrix staining. On the other hand, in VEGFR-2 shRNA DPSC transplants, odontoblast-like cells were not observed. Collagen fibers were seen in replacement of dentin/pulp-like structures. These results indicate that VEGFR-2 may play an important role in dentin regeneration and highlight the potential of VEGFR-2 modulation to enhance dentin regeneration and tissue engineering as a promising clinical application., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Janebodin, Chavanachat, Hays and Reyes Gil.)
- Published
- 2021
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22. Mater Artium Necessitas: The Birth of a COVID-19 Command Center.
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Campbell ST, Orner EP, Reyes Gil M, Fox AS, Goldstein DY, Wolgast LR, Cadoff EM, Freedman VH, Akabas MH, Prystowsky MB, and Szymczak WA
- Abstract
In February of 2020, New York City was unprepared for the COVID-19 pandemic. Cases of SARS-CoV-2 infection appeared and spread rapidly. Hospitals had to repurpose staff and establish diagnostic testing for this new viral infection. In the background of the usual respiratory pathogen testing performed in the clinical laboratory, SARS-CoV-2 testing at the Montefiore Medical System grew exponentially, from none to hundreds per day within the first week of testing. The job of appropriately routing SARS-CoV-2 viral specimens became overwhelming. Additional staff was required to triage these specimens to multiple in-house testing platforms as well as external reference laboratories. Since medical school classes and many research laboratories shut down at the Albert Einstein College of Medicine and students were eager to help fight the pandemic, we seized the opportunity to engage and train senior MD-PhD students to assist in triaging specimens. This volunteer force enabled us to establish the "Pathology Command Center," staffed by these students as well as residents and furloughed dental associates. The Pathology Command Center staff were tasked with the accessioning and routing of specimens, answering questions from clinical teams, and updating ever evolving protocols developed in collaboration with a team of Infectious Disease clinicians. Many lessons were learned during this process, including how best to restructure an accessioning department and how to properly onboard students and repurpose staff while establishing safeguards for their well-being during these unprecedented times. In this article, we share some of our challenges, successes, and what we ultimately learned as an organization., Competing Interests: Declaration of Conflicting Interests: The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article., (© The Author(s) 2021.)
- Published
- 2021
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23. ABO blood type association with SARS-CoV-2 infection mortality: A single-center population in New York City.
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Szymanski J, Mohrmann L, Carter J, Nelson R, Chekuri S, Assa A, Spund B, Reyes-Gil M, Uehlinger J, Baron S, and Paroder M
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- ABO Blood-Group System, Aged, Aged, 80 and over, COVID-19 therapy, Disease-Free Survival, Female, Humans, Incidence, Male, Middle Aged, New York City epidemiology, Retrospective Studies, Survival Rate, COVID-19 blood, COVID-19 mortality, Hospital Mortality, Hospitals, SARS-CoV-2 metabolism
- Abstract
Background: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has a variable clinical course with significant mortality. Early reports suggested higher rates of SARS-CoV-2 infection in patients with type A blood and enrichment of type A individuals among COVID-19 mortalities., Study Design and Methods: The study includes all patients hospitalized or with an emergency department (ED) visit who were tested for SARS-CoV-2 between March 10, 2020 and June 8, 2020 and had a positive test result by nucleic acid test (NAT) performed on a nasopharyngeal swab specimen. A total of 4968 patients met the study inclusion criteria, with a subsequent 23.1% (n = 1146/4968) all-cause mortality rate in the study cohort. To estimate overall risk by ABO type and account for the competing risks of in-hospital mortality and discharge, we calculated the cumulative incidence function (CIF) for each event. Cause-specific hazard ratios (csHRs) for in-hospital mortality and discharge were analyzed using multivariable Cox proportional hazards models., Results: Type A blood was associated with the increased cause-specific hazard of death among COVID-19 patients compared to type O (HR = 1.17, 1.02-1.33, p = .02) and type B (HR = 1.32,1.10-1.58, p = .003)., Conclusions: Our study shows that ABO histo-blood group type is associated with the risk of in-hospital death in COVID-19 patients, warranting additional inquiry. Elucidating the mechanism behind this association may reveal insights into the susceptibility and/or immunity to SARS-CoV-2., (© 2021 AABB.)
- Published
- 2021
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24. First Report of Compound Heterozygosity for Hb S ( HBB : c.20A>T) and Hb Haringey ( HBB : c.131A>G).
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Ogu UO, Reyes Gil M, Tolu SS, Acharya SA, and Minniti CP
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- Adult, Fetal Hemoglobin analysis, Hemoglobin, Sickle genetics, Humans, Male, Anemia, Sickle Cell genetics, Hemoglobinopathies diagnosis, Hemoglobinopathies genetics, beta-Thalassemia
- Abstract
Sickle cell disease variants include hemoglobinopathies that result from inheritance of the sickle cell globin mutation with another globin mutation. The most common variants include the homozygous disease state (Hb SS disease), Hb S ( HBB : c.20A>T)/Hb C ( HBB : c.19G>A) disease and Hb S/β-thalassemia (Hb S/β-thal). Other rare/less common variants such as Hb S/Hb E ( HBB : c.79G>A) and Hb S/HPFH [hereditary persistence of fetal hemoglobin (Hb)] disease exist. We report the first case of compound heterozygosity for Hb S and Hb Haringey ( HBB : c.131A>G) in a 35-year-old male following a positive sickle screen test on hospital admission for pancreatitis. Ion exchange high performance liquid chromatography (HPLC), Hb electrophoresis and genetic sequencing were utilized to identify a new sickle Hb variant: Hb S/Hb Haringey. Hb S/Hb Haringey is a newly discovered sickle cell variant which seems to portray a mild/benign clinical phenotype of sickle cell disease.
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- 2021
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25. Using Automated Machine Learning to Predict the Mortality of Patients With COVID-19: Prediction Model Development Study.
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Ikemura K, Bellin E, Yagi Y, Billett H, Saada M, Simone K, Stahl L, Szymanski J, Goldstein DY, and Reyes Gil M
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- COVID-19 virology, Female, Humans, Male, Middle Aged, Models, Statistical, Pandemics, Retrospective Studies, SARS-CoV-2 isolation & purification, Survival Analysis, COVID-19 mortality, Machine Learning
- Abstract
Background: During a pandemic, it is important for clinicians to stratify patients and decide who receives limited medical resources. Machine learning models have been proposed to accurately predict COVID-19 disease severity. Previous studies have typically tested only one machine learning algorithm and limited performance evaluation to area under the curve analysis. To obtain the best results possible, it may be important to test different machine learning algorithms to find the best prediction model., Objective: In this study, we aimed to use automated machine learning (autoML) to train various machine learning algorithms. We selected the model that best predicted patients' chances of surviving a SARS-CoV-2 infection. In addition, we identified which variables (ie, vital signs, biomarkers, comorbidities, etc) were the most influential in generating an accurate model., Methods: Data were retrospectively collected from all patients who tested positive for COVID-19 at our institution between March 1 and July 3, 2020. We collected 48 variables from each patient within 36 hours before or after the index time (ie, real-time polymerase chain reaction positivity). Patients were followed for 30 days or until death. Patients' data were used to build 20 machine learning models with various algorithms via autoML. The performance of machine learning models was measured by analyzing the area under the precision-recall curve (AUPCR). Subsequently, we established model interpretability via Shapley additive explanation and partial dependence plots to identify and rank variables that drove model predictions. Afterward, we conducted dimensionality reduction to extract the 10 most influential variables. AutoML models were retrained by only using these 10 variables, and the output models were evaluated against the model that used 48 variables., Results: Data from 4313 patients were used to develop the models. The best model that was generated by using autoML and 48 variables was the stacked ensemble model (AUPRC=0.807). The two best independent models were the gradient boost machine and extreme gradient boost models, which had an AUPRC of 0.803 and 0.793, respectively. The deep learning model (AUPRC=0.73) was substantially inferior to the other models. The 10 most influential variables for generating high-performing models were systolic and diastolic blood pressure, age, pulse oximetry level, blood urea nitrogen level, lactate dehydrogenase level, D-dimer level, troponin level, respiratory rate, and Charlson comorbidity score. After the autoML models were retrained with these 10 variables, the stacked ensemble model still had the best performance (AUPRC=0.791)., Conclusions: We used autoML to develop high-performing models that predicted the survival of patients with COVID-19. In addition, we identified important variables that correlated with mortality. This is proof of concept that autoML is an efficient, effective, and informative method for generating machine learning-based clinical decision support tools., (©Kenji Ikemura, Eran Bellin, Yukako Yagi, Henny Billett, Mahmoud Saada, Katelyn Simone, Lindsay Stahl, James Szymanski, D Y Goldstein, Morayma Reyes Gil. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 26.02.2021.)
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- 2021
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26. Correlation of Coagulation Parameters With Clinical Outcomes During the Coronavirus-19 Surge in New York: Observational Cohort.
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Reyes Gil M, Gonzalez-Lugo JD, Rahman S, Barouqa M, Szymanski J, Ikemura K, Lo Y, and Billett HH
- Abstract
Importance: COVID-19 has caused a worldwide illness and New York became the epicenter of COVID-19 in the United States from Mid-March to May 2020., Objective: To investigate the coagulopathic presentation of COVID and its natural course during the early stages of the COVID-19 surge in New York. To investigate whether hematologic and coagulation parameters can be used to assess illness severity and death., Design: Retrospective case study of positive COVID inpatients between March 20, 2020-March 31, 2020., Setting: Montefiore Health System main hospital, Moses, a large tertiary care center in the Bronx., Participants: Adult inpatients with positive COVID tests hospitalized at MHS., Exposure for Observational Studies: Datasets of participants were queried for demographic (age, sex, socioeconomic status, and self-reported race and/or ethnicity), clinical and laboratory data., Main Outcome and Measures: Relationship and predictive value of measured parameters to mortality and illness severity., Results: Of the 225 in this case review, 75 died during hospitalization while 150 were discharged home. Only the admission PT, absolute neutrophil count (ANC) and first D-Dimer could significantly differentiate those who were discharged alive and those who died. Logistic regression analysis shows increased odds ratio for mortality by first D-Dimer within 48 hrs. of admission. The optimal cut-point for the initial D-Dimer to predict mortality was found to be 2.1 μg/mL. 15% of discharged patients required readmission and more than a third of readmitted patients died (5% of all initially discharged)., Conclusion: We describe here a comprehensive assessment of hematologic and coagulation parameters in COVID-19 and examine the relationship of these to mortality. We demonstrate that both initial and maximum D-Dimer values are biomarkers that can be used for survival assessments. Furthermore, D-Dimer may be useful to follow up discharged patients., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Reyes Gil, Gonzalez-Lugo, Rahman, Barouqa, Szymanski, Ikemura, Lo and Billett.)
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- 2021
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27. Anticoagulation in COVID-19: Effect of Enoxaparin, Heparin, and Apixaban on Mortality.
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Billett HH, Reyes-Gil M, Szymanski J, Ikemura K, Stahl LR, Lo Y, Rahman S, Gonzalez-Lugo JD, Kushnir M, Barouqa M, Golestaneh L, and Bellin E
- Subjects
- Aged, Aged, 80 and over, Biomarkers metabolism, COVID-19 mortality, Cohort Studies, Female, Fibrin Fibrinogen Degradation Products metabolism, Humans, Male, Middle Aged, Survival Analysis, Anticoagulants therapeutic use, Blood Coagulation drug effects, Enoxaparin therapeutic use, Heparin therapeutic use, Pyrazoles therapeutic use, Pyridones therapeutic use, SARS-CoV-2 physiology, COVID-19 Drug Treatment
- Abstract
Background: Mortality in coronavirus disease of 2019 (COVID-19) is associated with increases in prothrombotic parameters, particularly D-dimer levels. Anticoagulation has been proposed as therapy to decrease mortality, often adjusted for illness severity., Objective: We wanted to investigate whether anticoagulation improves survival in COVID-19 and if this improvement in survival is associated with disease severity., Methods: This is a cohort study simulating an intention-to-treat clinical trial, by analyzing the effect on mortality of anticoagulation therapy chosen in the first 48 hours of hospitalization. We analyzed 3,625 COVID-19+ inpatients, controlling for age, gender, glomerular filtration rate, oxygen saturation, ventilation requirement, intensive care unit admission, and time period, all determined during the first 48 hours., Results: Adjusted logistic regression analyses demonstrated a significant decrease in mortality with prophylactic use of apixaban (odds ratio [OR] 0.46, p = 0.001) and enoxaparin (OR = 0.49, p = 0.001). Therapeutic apixaban was also associated with decreased mortality (OR 0.57, p = 0.006) but was not more beneficial than prophylactic use when analyzed over the entire cohort or within D-dimer stratified categories. Higher D-dimer levels were associated with increased mortality ( p < 0.0001). When adjusted for these same comorbidities within D-dimer strata, patients with D-dimer levels < 1 µg/mL did not appear to benefit from anticoagulation while patients with D-dimer levels > 10 µg/mL derived the most benefit. There was no increase in transfusion requirement with any of the anticoagulants used., Conclusion: We conclude that COVID-19+ patients with moderate or severe illness benefit from anticoagulation and that apixaban has similar efficacy to enoxaparin in decreasing mortality in this disease., Competing Interests: H.H.B. has received research or advisory funding from Bristol Myers Squibb, Janssen Pharmaceuticals, Bayer, Kedrion Pharmaceuticals, and Alexion Pharmaceuticals. M.K. has received research or advisory funding from Bristol Myers Squibb and Janssen Pharmaceuticals. All other authors declare no competing interests., (Thieme. All rights reserved.)
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- 2020
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28. Assessment of Lupus Anticoagulant Positivity in Patients With Coronavirus Disease 2019 (COVID-19).
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Reyes Gil M, Barouqa M, Szymanski J, Gonzalez-Lugo JD, Rahman S, and Billett HH
- Subjects
- Adult, Aged, Antiphospholipid Syndrome complications, Betacoronavirus, C-Reactive Protein metabolism, COVID-19, Coronavirus Infections complications, Coronavirus Infections virology, Female, Humans, Male, Middle Aged, Pandemics, Partial Thromboplastin Time, Pneumonia, Viral complications, Pneumonia, Viral virology, SARS-CoV-2, Thrombosis blood, Thrombosis complications, Coronavirus Infections blood, Lupus Coagulation Inhibitor blood, Pneumonia, Viral blood
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- 2020
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29. Hemoglobin F mitigation of sickle cell complications decreases with aging.
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Tolu SS, Reyes-Gil M, Ogu UO, Thomas M, Bouhassira EE, and Minniti CP
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- Adult, Age Factors, Aged, Aging, Female, Humans, Male, Middle Aged, Young Adult, Anemia, Sickle Cell complications, Fetal Hemoglobin metabolism
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- 2020
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30. Hemolysis and Nonhemorrhagic Stroke During Venoarterial Extracorporeal Membrane Oxygenation.
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Saeed O, Jakobleff WA, Forest SJ, Chinnadurai T, Mellas N, Rangasamy S, Xia Y, Madan S, Acharya P, Algodi M, Patel SR, Shin J, Vukelic S, Sims DB, Reyes Gil M, Billett HH, Kizer JR, Goldstein DJ, and Jorde UP
- Subjects
- Academic Medical Centers, Adult, Age Factors, Aged, California, Cohort Studies, Extracorporeal Membrane Oxygenation methods, Extracorporeal Membrane Oxygenation mortality, Female, Humans, Kaplan-Meier Estimate, Male, Middle Aged, Proportional Hazards Models, Retrospective Studies, Risk Assessment, Severity of Illness Index, Sex Factors, Stroke mortality, Cause of Death, Extracorporeal Membrane Oxygenation adverse effects, Hemolysis, Stroke etiology
- Abstract
Background: Hemolysis, even at low levels, activates platelets to create a prothrombotic state and is common during mechanical circulatory support. We examined the association of low-level hemolysis (LLH) and nonhemorrhagic stroke during venoarterial extracorporeal membrane oxygenation (VA ECMO) support., Methods: A single-center retrospective review of all adult patients placed on VA ECMO from January 2012 to September 2017 was conducted. To determine the association between LLH and nonhemorrhagic stroke, patients were categorized as those with and without LLH. LLH was defined by 48-hour plasma free hemoglobin (PFHb) of 11 to 50 mg/dL after VA ECMO implantation., Results: Of 201 patients who underwent VA ECMO placement, 150 (75%) met inclusion criteria and comprised the study population. They were 55 ± 14 years of age and 50 (33%) were women. Sixty-two (41%) patients had LLH. Patients with LLH had a higher likelihood of incident nonhemorrhagic stroke during VA ECMO support (20 [32%] versus 4 [5%]; adjusted hazard ratio [HR], 7.6; 95% confidence interval [CI], 2.2 to 25.9; p = 0.001). The severity of LLH was associated with an incrementally higher likelihood of a nonhemorrhagic stroke (PFHb 26 to 50 mg/dL: HR, 11.3; 95% CI, 3.6 to 35.1; p = 0.001; PFHb 11 to 25 mg/dL: HR, 4.4; 95% CI, 1.36 to 14.85; p = 0.014) in comparison with no LLH. Those with LLH had a 2-fold greater increase in mean platelet volume after VA ECMO placement (0.98 ± 1.1 fL versus 0.49 ± 0.96 fL; p = 0.03). Patients with a nonhemorrhagic stroke had a higher operative mortality (20 [83%] versus 57 [45%]; adjusted HR, 3.1; 95% CI, 1.8 to 5.3; p < 0.001)., Conclusions: Hemolysis at low levels during VA ECMO support is associated with subsequent nonhemorrhagic stroke., (Copyright © 2019 The Society of Thoracic Surgeons. Published by Elsevier Inc. All rights reserved.)
- Published
- 2019
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31. Speed Reduction Does Not Restore High Molecular Weight von Willebrand Multimers During HeartMate II Support: An In Vivo Study.
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Saeed O, Rangasamy S, Reyes Gil M, Goldstein DJ, Billett HH, Jorde UP, and Patel SR
- Subjects
- Adult, Aged, Female, Humans, Male, Middle Aged, Molecular Weight, Heart-Assist Devices adverse effects, von Willebrand Diseases etiology, von Willebrand Factor chemistry
- Abstract
Acquired von Willebrand Syndrome (AVWS) in patients undergoing continuous-flow left ventricular assist device support is due to the loss of von Willebrand factor (vWF) high molecular weight multimers (HMWMs) by shear-mediated mechanisms. We investigated whether reducing speed in vivo would mitigate the shear effect. In outpatients (n = 6) with a HeartMate II, pump speed was decreased to 8,000 rpm for 6 hours. At baseline (9,140 ± 189 rpm), patients had an AVWS as evidenced by low vWF activity:antigen ratios (0.58 ± 0.13, normal >0.7) and reduced HMWMs. After 6 hours, there was no significant change in either the vWF activity:antigen ratio or the HMWMs. Decreasing pump speed does not ameliorate AVWS.
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- 2018
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32. Sildenafil Is Associated With Reduced Device Thrombosis and Ischemic Stroke Despite Low-Level Hemolysis on Heart Mate II Support.
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Saeed O, Rangasamy S, Selevany I, Madan S, Fertel J, Eisenberg R, Aljoudi M, Patel SR, Shin J, Sims DB, Reyes Gil M, Goldstein DJ, Slepian MJ, Billett HH, and Jorde UP
- Subjects
- Brain Ischemia diagnosis, Brain Ischemia etiology, Chi-Square Distribution, Disease-Free Survival, Heart Failure blood, Heart Failure diagnosis, Heart Failure physiopathology, Humans, Kaplan-Meier Estimate, Mean Platelet Volume, Proportional Hazards Models, Prosthesis Design, Protective Factors, Retrospective Studies, Risk Factors, Stroke diagnosis, Stroke etiology, Time Factors, Treatment Outcome, Brain Ischemia prevention & control, Heart Failure therapy, Heart-Assist Devices adverse effects, Hemolysis, Phosphodiesterase 5 Inhibitors therapeutic use, Sildenafil Citrate therapeutic use, Stroke prevention & control
- Abstract
Background: Persistent low-level hemolysis (LLH) during continuous-flow mechanical circulatory support is associated with subsequent thrombosis. Free hemoglobin from ongoing hemolysis scavenges nitric oxide (NO) to create an NO deficiency which can augment platelet function leading to a prothrombotic state. The phosphodiesterase-5 inhibitor, sildenafil, potentiates NO signaling to inhibit platelet function. Accordingly, we investigated the association of sildenafil administration and thrombotic events in patients with LLH during Heart Mate II support., Methods and Results: A single-center review of all patients implanted with a Heart Mate II who survived to discharge (n=144). LLH was defined by a discharge lactate dehydrogenase level of 400 to 700 U/L. Patients were categorized as (1) LLH not on sildenafil, (2) LLH on sildenafil, (3) no LLH not on sildenafil, and (4) no LLH on sildenafil. Age, sex, platelet count, and mean platelet volume were similar between groups. Seventeen patients had either device thrombosis or ischemic stroke. Presence of LLH was associated with a greater risk of thrombosis (adjusted hazard ratio, 15; 95% confidence interval, 4.5-50; P <0.001 versus no LLH, not on sildenafil). This risk was reduced in patients with LLH on sildenafil (adjusted hazard ratio, 1.7; 95% confidence interval, 0.2-16.1; P =0.61). Device thrombosis and ischemic stroke were associated with an increase in mean platelet volume (9.6±0.5 to 10.9±0.8 fL, P <0.001). Patients with LLH not on sildenafil had a greater increase in mean platelet volume in comparison to those with LLH on sildenafil ( P <0.001)., Conclusions: Sildenafil is associated with reduced device thrombosis and ischemic stroke during ongoing LLH on Heart Mate II support., (© 2017 American Heart Association, Inc.)
- Published
- 2017
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33. Using Artificial Intelligence to Reduce the Risk of Nonadherence in Patients on Anticoagulation Therapy.
- Author
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Labovitz DL, Shafner L, Reyes Gil M, Virmani D, and Hanina A
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- Adult, Aged, Anticoagulants administration & dosage, Female, Humans, Male, Middle Aged, Patient Outcome Assessment, Anticoagulants blood, Artificial Intelligence, Brain Ischemia drug therapy, Medical Informatics Applications, Medication Adherence, Mobile Applications, Stroke drug therapy
- Abstract
Background and Purpose: This study evaluated the use of an artificial intelligence platform on mobile devices in measuring and increasing medication adherence in stroke patients on anticoagulation therapy. The introduction of direct oral anticoagulants, while reducing the need for monitoring, have also placed pressure on patients to self-manage. Suboptimal adherence goes undetected as routine laboratory tests are not reliable indicators of adherence, placing patients at increased risk of stroke and bleeding., Methods: A randomized, parallel-group, 12-week study was conducted in adults (n=28) with recently diagnosed ischemic stroke receiving any anticoagulation. Patients were randomized to daily monitoring by the artificial intelligence platform (intervention) or to no daily monitoring (control). The artificial intelligence application visually identified the patient, the medication, and the confirmed ingestion. Adherence was measured by pill counts and plasma sampling in both groups., Results: For all patients (n=28), mean (SD) age was 57 years (13.2 years) and 53.6% were women. Mean (SD) cumulative adherence based on the artificial intelligence platform was 90.5% (7.5%). Plasma drug concentration levels indicated that adherence was 100% (15 of 15) and 50% (6 of 12) in the intervention and control groups, respectively., Conclusions: Patients, some with little experience using a smartphone, successfully used the technology and demonstrated a 50% improvement in adherence based on plasma drug concentration levels. For patients receiving direct oral anticoagulants, absolute improvement increased to 67%. Real-time monitoring has the potential to increase adherence and change behavior, particularly in patients on direct oral anticoagulant therapy., Clinical Trial Registration: URL: http://www.clinicaltrials.gov. Unique identifier: NCT02599259., (© 2017 American Heart Association, Inc.)
- Published
- 2017
- Full Text
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