197 results on '"Retroviridae Proteins physiology"'
Search Results
2. Targeting the HTLV-I-Regulated BATF3/IRF4 Transcriptional Network in Adult T Cell Leukemia/Lymphoma.
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Nakagawa M, Shaffer AL 3rd, Ceribelli M, Zhang M, Wright G, Huang DW, Xiao W, Powell J, Petrus MN, Yang Y, Phelan JD, Kohlhammer H, Dubois SP, Yoo HM, Bachy E, Webster DE, Yang Y, Xu W, Yu X, Zhao H, Bryant BR, Shimono J, Ishio T, Maeda M, Green PL, Waldmann TA, and Staudt LM
- Subjects
- Animals, Basic-Leucine Zipper Transcription Factors physiology, Cell Line, Tumor, Genes, myc, Humans, Mice, Proteins antagonists & inhibitors, Retroviridae Proteins physiology, Basic-Leucine Zipper Transcription Factors genetics, Gene Regulatory Networks, Human T-lymphotropic virus 1 physiology, Interferon Regulatory Factors genetics, Leukemia-Lymphoma, Adult T-Cell genetics
- Abstract
Adult T cell leukemia/lymphoma (ATLL) is a frequently incurable disease associated with the human lymphotropic virus type I (HTLV-I). RNAi screening of ATLL lines revealed that their proliferation depends on BATF3 and IRF4, which cooperatively drive ATLL-specific gene expression. HBZ, the only HTLV-I encoded transcription factor that is expressed in all ATLL cases, binds to an ATLL-specific BATF3 super-enhancer and thereby regulates the expression of BATF3 and its downstream targets, including MYC. Inhibitors of bromodomain-and-extra-terminal-domain (BET) chromatin proteins collapsed the transcriptional network directed by HBZ and BATF3, and were consequently toxic for ATLL cell lines, patient samples, and xenografts. Our study demonstrates that the HTLV-I oncogenic retrovirus exploits a regulatory module that can be attacked therapeutically with BET inhibitors., (Published by Elsevier Inc.)
- Published
- 2018
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3. HBZ-mediated shift of JunD from growth suppressor to tumor promoter in leukemic cells by inhibition of ribosomal protein S25 expression.
- Author
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Terol M, Gazon H, Lemasson I, Duc-Dodon M, Barbeau B, Césaire R, Mesnard JM, and Péloponèse JM Jr
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- Biological Transport, Cell Line, Cell Nucleus metabolism, Culture Media, Serum-Free, HEK293 Cells, HTLV-I Infections blood, Humans, Protein Isoforms genetics, Protein Isoforms physiology, Proto-Oncogene Proteins physiology, Proto-Oncogene Proteins c-jun genetics, RNA, Messenger metabolism, Ribosomal Proteins genetics, Ribosomes metabolism, T-Lymphocytes pathology, T-Lymphocytes virology, Transfection, Basic-Leucine Zipper Transcription Factors physiology, Cell Transformation, Viral genetics, Gene Expression Regulation, Leukemic genetics, Gene Expression Regulation, Viral genetics, Protein Biosynthesis genetics, Proto-Oncogene Proteins c-jun physiology, Retroviridae Proteins physiology, Ribosomal Proteins antagonists & inhibitors
- Abstract
Human T-cell leukemia virus type 1 (HTLV-1) basic-leucine zipper (bZIP) factor (HBZ) is a key player in proliferation and transformation of HTLV-1-infected cells, thus contributing to adult T-cell leukemia (ATL) development. HBZ deregulates gene expression within the host cell by interacting with several cellular partners. Through its C-terminal ZIP domain, HBZ is able to contact and activate JunD, a transcription factor of the AP-1 family. JunD mRNA is intronless but can generate two protein isoforms by alternative translation initiation: JunD full-length and Δ JunD, an N-terminal truncated form unresponsive to the tumor suppressor menin. Using various cell lines and primary T-lymphocytes, we show that after serum deprivation HBZ induces the expression of Δ JunD isoform. We demonstrate that, unlike JunD, Δ JunD induces proliferation and transformation of cells. To decipher the mechanisms for Δ JunD production, we looked into the translational machinery and observed that HBZ induces nuclear retention of RPS25 mRNA and loss of RPS25 protein expression, a component of the small ribosomal subunit. Therefore, HBZ bypasses translational control of JunD uORF and favors the expression of Δ JunD. In conclusion, we provide strong evidences that HBZ induces Δ JunD expression through alteration of the cellular translational machinery and that the truncated isoform Δ JunD has a central role in the oncogenic process leading to ATL.
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- 2017
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4. HTLV-1 bZIP factor protein targets the Rb/E2F-1 pathway to promote proliferation and apoptosis of primary CD4(+) T cells.
- Author
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Kawatsuki A, Yasunaga JI, Mitobe Y, Green PL, and Matsuoka M
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- Animals, CD4-Positive T-Lymphocytes virology, Cell Cycle, Cell Proliferation, Cells, Cultured, E2F1 Transcription Factor physiology, Histone Deacetylases metabolism, Humans, Mice, Mice, Inbred C57BL, Tumor Suppressor Protein p53 physiology, Apoptosis, Basic-Leucine Zipper Transcription Factors physiology, CD4-Positive T-Lymphocytes pathology, Retinoblastoma Protein physiology, Retroviridae Proteins physiology, Signal Transduction physiology
- Abstract
Human T-cell leukemia virus type 1 (HTLV-1) is an oncogenic retrovirus that induces a fatal T-cell malignancy, adult T-cell leukemia (ATL). Among several regulatory/accessory genes in HTLV-1, HTLV-1 bZIP factor (HBZ) is the only viral gene constitutively expressed in infected cells. Our previous study showed that HBZ functions in two different molecular forms, HBZ protein and HBZ RNA. In this study, we show that HBZ protein targets retinoblastoma protein (Rb), which is a critical tumor suppressor in many types of cancers. HBZ protein interacts with the Rb/E2F-1 complex and activates the transcription of E2F-target genes associated with cell cycle progression and apoptosis. Mouse primary CD4(+) T cells transduced with HBZ show accelerated G1/S transition and apoptosis, and importantly, T cells from HBZ transgenic (HBZ-Tg) mice also demonstrate enhanced cell proliferation and apoptosis. To evaluate the functions of HBZ protein alone in vivo, we generated a new transgenic mouse strain that expresses HBZ mRNA altered by silent mutations but encoding intact protein. In these mice, the numbers of effector/memory and Foxp3(+) T cells were increased, and genes associated with proliferation and apoptosis were upregulated. This study shows that HBZ protein promotes cell proliferation and apoptosis in primary CD4(+) T cells through activation of the Rb/E2F pathway, and that HBZ protein also confers onto CD4(+) T-cell immunophenotype similar to those of ATL cells, suggesting that HBZ protein has important roles in dysregulation of CD4(+) T cells infected with HTLV-1., Competing Interests: The authors declare no conflict of interest.
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- 2016
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5. Enhanced antagonism of BST-2 by a neurovirulent SIV envelope.
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Matsuda K, Chen CY, Whitted S, Chertova E, Roser DJ, Wu F, Plishka RJ, Ourmanov I, Buckler-White A, Lifson JD, Strebel K, and Hirsch VM
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- AIDS Dementia Complex etiology, Amino Acid Substitution, Animals, Antigens, CD physiology, Disease Models, Animal, GPI-Linked Proteins antagonists & inhibitors, GPI-Linked Proteins physiology, HIV-1, Host-Pathogen Interactions, Humans, Macaca mulatta, Membrane Glycoproteins genetics, Membrane Glycoproteins physiology, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Simian Acquired Immunodeficiency Syndrome virology, Simian Immunodeficiency Virus genetics, Simian Immunodeficiency Virus physiology, Viral Load, Virulence genetics, Virus Replication genetics, Simian Immunodeficiency Virus pathogenicity
- Abstract
Current antiretroviral therapy (ART) is not sufficient to completely suppress disease progression in the CNS, as indicated by the rising incidence of HIV-1-associated neurocognitive disorders (HAND) among infected individuals on ART. It is not clear why some HIV-1-infected patients develop HAND, despite effective repression of viral replication in the circulation. SIV-infected nonhuman primate models are widely used to dissect the mechanisms of viral pathogenesis in the CNS. Here, we identified 4 amino acid substitutions in the cytoplasmic tail of viral envelope glycoprotein gp41 of the neurovirulent virus SIVsm804E that enhance replication in macrophages and associate with enhanced antagonism of the host restriction factor BM stromal cell antigen 2 (BST-2). Rhesus macaques were inoculated with a variant of the parental virus SIVsmE543-3 that had been engineered to contain the 4 amino acid substitutions present in gp41 of SIVsm804E. Compared with WT virus-infected controls, animals infected with mutant virus exhibited higher viral load in cerebrospinal fluid. Together, these results are consistent with a potential role for BST-2 in the CNS microenvironment and suggest that BST-2 antagonists may serve as a possible target for countermeasures against HAND.
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- 2016
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6. HTLV-1 bZIP Factor RNA and Protein Impart Distinct Functions on T-cell Proliferation and Survival.
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Mitobe Y, Yasunaga J, Furuta R, and Matsuoka M
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- Animals, Apoptosis, Basic-Leucine Zipper Transcription Factors genetics, Cell Division, Cell Line, Cell Line, Tumor, Cell Survival, Human T-lymphotropic virus 1 genetics, Humans, Imidazoles pharmacology, Inhibitor of Apoptosis Proteins antagonists & inhibitors, Inhibitor of Apoptosis Proteins biosynthesis, Inhibitor of Apoptosis Proteins genetics, Inhibitor of Apoptosis Proteins physiology, Leukemia-Lymphoma, Adult T-Cell pathology, Mice, Mice, Inbred C57BL, Mutation, Naphthoquinones pharmacology, Promoter Regions, Genetic, RNA genetics, RNA, Viral genetics, Repressor Proteins antagonists & inhibitors, Repressor Proteins biosynthesis, Repressor Proteins genetics, Retroviridae Proteins genetics, Survivin, T-Lymphocytes physiology, Transcription, Genetic, Transduction, Genetic, Basic-Leucine Zipper Transcription Factors physiology, Gene Expression Regulation, Viral, Human T-lymphotropic virus 1 physiology, RNA, Viral physiology, Retroviridae Proteins physiology, T-Lymphocytes virology
- Abstract
Infection of T cells with human T-cell leukemia virus type-1 (HTLV-1) induces clonal proliferation and is closely associated with the onset of adult T-cell leukemia-lymphoma (ATL) and inflammatory diseases. Although Tax expression is frequently suppressed in HTLV-1-infected cells, the accessory gene, HTLV-1 bZIP factor (HBZ), is continuously expressed and has been implicated in HTLV-1 pathogenesis. Here, we report that transduction of mouse T cells with specific mutants of HBZ that distinguish between its RNA and protein activity results in differential effects on T-cell proliferation and survival. HBZ RNA increased cell number by attenuating apoptosis, whereas HBZ protein induced apoptosis. However, both HBZ RNA and protein promoted S-phase entry of T cells. We further identified that the first 50 bp of the HBZ coding sequence are required for RNA-mediated cell survival. Transcriptional profiling of T cells expressing wild-type HBZ, RNA, or protein revealed that HBZ RNA is associated with genes involved in cell cycle, proliferation, and survival, while HBZ protein is more closely related to immunological properties of T cells. Specifically, HBZ RNA enhances the promoter activity of survivin, an inhibitor of apoptosis, to upregulate its expression. Inhibition of survivin using YM155 resulted in impaired proliferation of several ATL cell lines as well as a T-cell line expressing HBZ RNA. The distinct functions of HBZ RNA and protein may have several implications for the development of strategies to control the proliferation and survival mechanisms associated with HTLV-1 infection and ATL., (©2015 American Association for Cancer Research.)
- Published
- 2015
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7. Does chronic infection in retroviruses have a sense?
- Author
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Barbeau B and Mesnard JM
- Subjects
- Basic-Leucine Zipper Transcription Factors physiology, Chronic Disease, HIV-1 physiology, Human Immunodeficiency Virus Proteins physiology, Human T-lymphotropic virus 1 physiology, Humans, Promoter Regions, Genetic, Retroviridae Proteins physiology, Transcription, Genetic, Basic-Leucine Zipper Transcription Factors genetics, HIV Infections virology, HIV-1 genetics, HTLV-I Infections virology, Human Immunodeficiency Virus Proteins genetics, Human T-lymphotropic virus 1 genetics, Retroviridae Proteins genetics
- Abstract
Over recent years, retroviral gene expression has been shown to depend on a promoter that is bidirectional. This promoter activity is likely to occur at either end of the retroviral genome and has important consequences at the level of retroviral gene expression. This review focuses on the recent discovery of retroviral antisense genes termed HBZ [in human T-cell leukemia virus type 1 (HTLV-1)] and ASP (in HIV-1) in terms of their function and the regulation of their expression, both of which are interconnected with the expression and function of other viral proteins. Emphasis is also given to the potential implication of these proteins in the maintenance of chronic infection in infected individuals. In light of recent findings, the discovery of these new genes opens a new avenue for the future treatment of HTLV-1- and HIV-1-infected individuals., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2015
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8. Retroviral cyclin controls cyclin-dependent kinase 8-mediated transcription elongation and reinitiation.
- Author
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Birkenheuer CH, Brewster CD, Quackenbush SL, and Rovnak J
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- Animals, Carcinogenesis, Cyclins genetics, Early Growth Response Protein 1 genetics, Epsilonretrovirus genetics, Epsilonretrovirus pathogenicity, Fish Diseases genetics, Fish Diseases virology, Genes, Immediate-Early, Genes, fos, Genes, jun, HCT116 Cells, Host-Pathogen Interactions, Humans, Perches, RNA, Messenger genetics, RNA, Messenger metabolism, Retroviridae Infections genetics, Retroviridae Infections veterinary, Retroviridae Infections virology, Retroviridae Proteins genetics, Transcription Elongation, Genetic, Tumor Virus Infections genetics, Tumor Virus Infections veterinary, Tumor Virus Infections virology, Cyclin-Dependent Kinase 8 metabolism, Cyclins physiology, Epsilonretrovirus physiology, Retroviridae Proteins physiology
- Abstract
Unlabelled: Walleye dermal sarcoma virus (WDSV) infection is associated with the seasonal development and regression of walleye dermal sarcoma. Previous work showed that the retroviral cyclin (RV-cyclin), encoded by WDSV, has separable cyclin box and transcription activation domains. It binds to cyclin-dependent kinase 8 (CDK8) and enhances its kinase activity. CDK8 is evolutionarily conserved and is frequently overexpressed in human cancers. It is normally activated by cyclin C and is required for transcription elongation of the serum response genes (immediate early genes [IEGs]) FOS, EGR1, and cJUN. The IEGs drive cell proliferation, and their expression is brief and highly regulated. Here we show that constitutive expression of RV-cyclin in the HCT116 colon cancer cell line significantly increases the level of IEG expression in response to serum stimulation. Quantitative reverse transcription-PCR (RT-PCR) and nuclear run-on assays provide evidence that RV-cyclin does not alter the initiation of IEG transcription but does enhance the overall rate of transcription elongation and maintains transcription reinitiation. RV-cyclin does not increase activating phosphorylation events in the mitogen-activated protein kinase pathway and does not inhibit decay of IEG mRNAs. At the EGR1 gene locus, RV-cyclin increases and maintains RNA polymerase II (Pol II) occupancy after serum stimulation, in conjunction with increased and extended EGR1 gene expression. The RV-cyclin increases CDK8 occupancy at the EGR1 gene locus before and after serum stimulation. Both of RV-cyclin's functional domains, i.e., the cyclin box and the activation domain, are necessary for the overall enhancement of IEG expression. RV-cyclin presents a novel and ancient mechanism of retrovirus-induced oncogenesis., Importance: The data reported here are important to both virology and cancer biology. The novel mechanism pinpoints CDK8 in the development of walleye dermal sarcoma and sheds light on CDK8's role in many human cancers. CDK8 controls expression from highly regulated genes, including the interferon-stimulated genes. Its function is likely the target of many viral interferon-resistance mechanisms. CDK8 also controls cellular responses to metabolic stimuli, stress, and hypoxia, in addition to the serum response. The retroviral cyclin (RV-cyclin) represents a highly selected probe of CDK8 function. RV-cyclin does not control CDK8 specificity but instead enhances CDK8's effects on regulated genes, an important distinction for its use to delineate natural CDK8 targets. The outcomes of this research are applicable to investigations of normal and abnormal CDK8 functions. The mechanisms defined here will contribute directly to the dermal sarcoma model in fish and clarify an important path for oncogenesis and innate resistance to viruses., (Copyright © 2015, American Society for Microbiology. All Rights Reserved.)
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- 2015
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9. [Virological aspects of HTLV-1 infection and new therapeutical concepts].
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Mahieux R
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- Animals, Anti-Retroviral Agents therapeutic use, Clinical Trials as Topic, Drug Evaluation, Preclinical, Genome, Viral, HTLV-I Infections drug therapy, HTLV-I Infections prevention & control, Histone Deacetylase Inhibitors therapeutic use, Human T-lymphotropic virus 1 genetics, Humans, Leukemia-Lymphoma, Adult T-Cell drug therapy, Leukemia-Lymphoma, Adult T-Cell virology, Paraparesis, Tropical Spastic drug therapy, Paraparesis, Tropical Spastic virology, Primates, Proviruses drug effects, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Valproic Acid therapeutic use, Viral Load, Virus Replication, HTLV-I Infections virology, Human T-lymphotropic virus 1 physiology
- Abstract
HTLV-1 was the first human oncogenic retrovirus to be discovered. It is the etiological agent of adult T leukemia/lymphoma (ATLL) and of tropical spastic paraparesis/HTLV-1 associated myelopathy (TSP/HAM), two diseases that develop after a long latency period. Importantly, HTLV-1 does not cause ATLL through insertional mutagenesis. Apart from the gag, pro, pol and env genes, which are common to all retroviruses, HTLV-1 genome also encodes regulatory and auxiliary viral proteins. Among the former, Tax promotes cell transformation and HBZ is involved in the leukemic cells proliferation and in the maintenance of the transformed phenotype. Anti-ATLL therapies have lately made significant progress with an efficient antiviral treatment against the chronic and smoldering forms of this leukemia, but an efficient treatment of TSP/HAM patients is still lacking. Results from a recent study associating histone acetylase inhibitor with an anti-viral drug will be discussed here. While an increase in proviral load is considered a marker for disease progression, this treatment allows a significant drop of the proviral load in asymptomatic carriers.
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- 2011
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10. Charge-surrounded pockets and electrostatic interactions with small ions modulate the activity of retroviral fusion proteins.
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Lamb D, Schüttelkopf AW, van Aalten DM, and Brighty DW
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- Amino Acid Sequence, Animals, Anti-Retroviral Agents chemistry, Anti-Retroviral Agents pharmacology, Catalytic Domain drug effects, Cattle, Human T-lymphotropic virus 1 chemistry, Human T-lymphotropic virus 1 drug effects, Human T-lymphotropic virus 1 metabolism, Humans, Hydrogen Bonding, Ions chemistry, Leukemia Virus, Bovine metabolism, Models, Molecular, Molecular Sequence Data, Protein Conformation, Protein Structure, Tertiary physiology, Recombinant Fusion Proteins chemistry, Recombinant Fusion Proteins metabolism, Recombinant Fusion Proteins physiology, Retroviridae metabolism, Retroviridae physiology, Retroviridae Proteins metabolism, Surface Properties, Viral Envelope Proteins chemistry, Viral Envelope Proteins metabolism, Ions metabolism, Protein Folding, Retroviridae Proteins chemistry, Retroviridae Proteins physiology, Static Electricity
- Abstract
Refolding of viral class-1 membrane fusion proteins from a native state to a trimer-of-hairpins structure promotes entry of viruses into cells. Here we present the structure of the bovine leukaemia virus transmembrane glycoprotein (TM) and identify a group of asparagine residues at the membrane-distal end of the trimer-of-hairpins that is strikingly conserved among divergent viruses. These asparagines are not essential for surface display of pre-fusogenic envelope. Instead, substitution of these residues dramatically disrupts membrane fusion. Our data indicate that, through electrostatic interactions with a chloride ion, the asparagine residues promote assembly and profoundly stabilize the fusion-active structures that are required for viral envelope-mediated membrane fusion. Moreover, the BLV TM structure also reveals a charge-surrounded hydrophobic pocket on the central coiled coil and interactions with basic residues that cluster around this pocket are critical to membrane fusion and form a target for peptide inhibitors of envelope function. Charge-surrounded pockets and electrostatic interactions with small ions are common among class-1 fusion proteins, suggesting that small molecules that specifically target such motifs should prevent assembly of the trimer-of-hairpins and be of value as therapeutic inhibitors of viral entry.
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- 2011
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11. Requirement of the human T-cell leukemia virus p12 and p30 products for infectivity of human dendritic cells and macaques but not rabbits.
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Valeri VW, Hryniewicz A, Andresen V, Jones K, Fenizia C, Bialuk I, Chung HK, Fukumoto R, Parks RW, Ferrari MG, Nicot C, Cecchinato V, Ruscetti F, and Franchini G
- Subjects
- Animals, Basic-Leucine Zipper Transcription Factors genetics, Basic-Leucine Zipper Transcription Factors physiology, Cell Line, DNA Primers genetics, DNA, Viral genetics, Dendritic Cells immunology, Female, Gene Deletion, Genes, Viral, Genes, pX, Genotype, HTLV-I Infections immunology, HTLV-I Infections virology, Human T-lymphotropic virus 1 immunology, Human T-lymphotropic virus 1 physiology, Humans, In Vitro Techniques, Macaca mulatta, Mutagenesis, Mutation, Rabbits, Species Specificity, T-Lymphocytes immunology, T-Lymphocytes virology, Viral Proteins genetics, Viral Proteins physiology, Virulence genetics, Virulence physiology, Dendritic Cells virology, Human T-lymphotropic virus 1 genetics, Human T-lymphotropic virus 1 pathogenicity, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Viral Regulatory and Accessory Proteins genetics, Viral Regulatory and Accessory Proteins physiology
- Abstract
The identification of the genes necessary for human T-cell leukemia virus (HTLV-1) persistence in humans may provide targets for therapeutic approaches. We demonstrate that ablation of the HTLV-1 genes encoding p12, p30, or the HBZ protein, does not affect viral infectivity in rabbits and in this species, only the absence of HBZ is associated with a consistent reduction in virus levels. We observed reversion of the HTLV-1 mutants to the HTLV-1 wild-type genotype in none of the inoculated rabbits. In contrast, in macaques, the absence of HBZ was associated with reversion of the mutant virus to the wild-type genotype in 3 of the 4 animals within weeks from infection. Similarly, reversion to the wild type was observed in 2 of the 4 macaque inoculated with the p30 mutant. The 4 macaques exposed to the p12 knock remained seronegative, and only 2 animals were positive at a single time point for viral DNA in tissues. Interestingly, we found that the p12 and the p30 mutants were also severely impaired in their ability to replicate in human dendritic cells. These data suggest that infection of dendritic cells may be required for the establishment and maintenance of HTLV-1 infection in primate species.
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- 2010
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12. Simian immunodeficiency virus SIVagm from African green monkeys does not antagonize endogenous levels of African green monkey tetherin/BST-2.
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Lim ES and Emerman M
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- Animals, Blotting, Western, Cell Line, Gene Products, nef physiology, Interferon alpha-2, Interferon beta-1b, Interferon-alpha pharmacology, Interferon-beta pharmacology, Molecular Sequence Data, Recombinant Proteins, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Reverse Transcriptase Polymerase Chain Reaction, Simian Acquired Immunodeficiency Syndrome virology, Simian Immunodeficiency Virus drug effects, Viral Regulatory and Accessory Proteins physiology, Chlorocebus aethiops virology, Simian Immunodeficiency Virus physiology
- Abstract
The Vpu accessory gene that originated in the primate lentiviral lineage leading to human immunodeficiency virus type 1 is an antagonist of human tetherin/BST-2 restriction. Most other primate lentivirus lineages, including the lineage represented by simian immunodeficiency virus SIVagm from African green monkeys (AGMs), do not encode Vpu. While some primate lineages encode gene products other than Vpu that overcome tetherin/BST-2, we find that SIVagm does not antagonize physiologically relevant levels of AGM tetherin/BST-2. AGM tetherin/BST-2 can be induced by low levels of type I interferon and can potently restrict two independent strains of SIVagm. Although SIVagm Nef had an effect at low levels of AGM tetherin/BST-2, simian immunodeficiency virus SIVmus Vpu, from a virus that infects the related monkey Cercopithecus cephus, is able to antagonize even at high levels of AGM tetherin/BST-2 restriction. We propose that since the replication of SIVagm does not induce interferon production in vivo, tetherin/BST-2 is not induced, and therefore, SIVagm does not need Vpu. This suggests that primate lentiviruses evolve tetherin antagonists such as Vpu or Nef only if they encounter tetherin during the typical course of natural infection.
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- 2009
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13. Species-specific inhibition of APOBEC3C by the prototype foamy virus protein bet.
- Author
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Perkovic M, Schmidt S, Marino D, Russell RA, Stauch B, Hofmann H, Kopietz F, Kloke BP, Zielonka J, Ströver H, Hermle J, Lindemann D, Pathak VK, Schneider G, Löchelt M, Cichutek K, and Münk C
- Subjects
- APOBEC-3G Deaminase, Animals, Cells, Cultured, Chlorocebus aethiops, Cricetinae, Cross-Linking Reagents, Dimerization, Gene Products, vif physiology, Humans, Immunoblotting, Immunoprecipitation, Kidney cytology, Kidney metabolism, Lentivirus genetics, Lentivirus metabolism, Macaca mulatta, Macaca nemestrina, Pan troglodytes, Simian foamy virus, Transfection, Virus Assembly, Virus Replication drug effects, Virus Replication genetics, Cytidine Deaminase antagonists & inhibitors, Cytidine Deaminase metabolism, Proviruses genetics, Retroviridae Proteins physiology
- Abstract
The APOBEC3 cytidine deaminases are part of the intrinsic defense of cells against retroviruses. Lentiviruses and spumaviruses have evolved essential accessory proteins, Vif and Bet, respectively, which counteract the APOBEC3 proteins. We show here that Bet of the Prototype foamy virus inhibits the antiviral APOBEC3C activity by a mechanism distinct to Vif: Bet forms a complex with APOBEC3C without inducing its degradation. Bet abolished APOBEC3C dimerization as shown by coimmunoprecipitation and cross-linking experiments. These findings implicate a physical interaction between Bet and the APOBEC3C. Subsequently, we identified the Bet interaction domain in human APOBEC3C in the predicted APOBEC3C dimerization site. Taken together, these data support the hypothesis that Bet inhibits incorporation of APOBEC3Cs into retroviral particles. Bet likely achieves this by trapping APOBEC3C protein in complexes rendering them unavailable for newly generated viruses due to direct immobilization.
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- 2009
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14. Retroviral integrase superfamily: the structural perspective.
- Author
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Nowotny M
- Subjects
- Animals, Bacterial Proteins chemistry, Bacterial Proteins physiology, Catalytic Domain, Dimerization, Hydrolysis, Integrases physiology, Mammals metabolism, Mice, Models, Molecular, Nucleic Acids metabolism, Protein Conformation, Protein Structure, Secondary, Protein Structure, Tertiary, Retroviridae Proteins physiology, Ribonuclease H chemistry, Ribonuclease H physiology, Species Specificity, Structure-Activity Relationship, Substrate Specificity, Transposases chemistry, Transposases physiology, Viral Proteins chemistry, Viral Proteins physiology, Integrases chemistry, Multigene Family, Retroviridae Proteins chemistry
- Abstract
The retroviral integrase superfamily (RISF) comprises numerous important nucleic acid-processing enzymes, including transposases, integrases and various nucleases. These enzymes are involved in a wide range of processes such as transposition, replication and repair of DNA, homologous recombination, and RNA-mediated gene silencing. Two out of the four enzymes that are encoded by the human immunodeficiency virus--RNase H1 and integrase--are members of this superfamily. RISF enzymes act on various substrates, and yet show remarkable mechanistic and structural similarities. All share a common fold of the catalytic core and the active site, which is composed primarily of carboxylate residues. Here, I present RISF proteins from a structural perspective, describing the individual members and the common and divergent elements of their structures, as well as the mechanistic insights gained from the structures of RNase H1 enzyme complexes with RNA/DNA hybrids.
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- 2009
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15. Murine endogenous retroviruses.
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Stocking C and Kozak CA
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- Amino Acid Sequence, Animals, Endogenous Retroviruses classification, Endogenous Retroviruses genetics, Endogenous Retroviruses pathogenicity, Evolution, Molecular, Gammaretrovirus classification, Gammaretrovirus genetics, Gene Transfer, Horizontal, Genes, Intracisternal A-Particle genetics, Genome, Host-Pathogen Interactions genetics, Humans, Membrane Glycoproteins genetics, Membrane Glycoproteins physiology, Models, Biological, Molecular Sequence Data, Mutagenesis, Insertional, Neoplasms veterinary, Neoplasms virology, Receptors, Virus genetics, Receptors, Virus physiology, Retroelements genetics, Retroelements physiology, Retroviridae Infections veterinary, Retroviridae Infections virology, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Rodent Diseases virology, Tumor Virus Infections veterinary, Tumor Virus Infections virology, Vertebrates virology, Endogenous Retroviruses physiology, Host-Pathogen Interactions physiology, Mice virology
- Abstract
Up to 10% of the mouse genome is comprised of endogenous retrovirus (ERV) sequences, and most represent the remains of ancient germ line infections. Our knowledge of the three distinct classes of ERVs is inversely correlated with their copy number, and their characterization has benefited from the availability of divergent wild mouse species and subspecies, and from ongoing analysis of the Mus genome sequence. In contrast to human ERVs, which are nearly all extinct, active mouse ERVs can still be found in all three ERV classes. The distribution and diversity of ERVs has been shaped by host-virus interactions over the course of evolution, but ERVs have also been pivotal in shaping the mouse genome by altering host genes through insertional mutagenesis, by adding novel regulatory and coding sequences, and by their co-option by host cells as retroviral resistance genes. We review mechanisms by which an adaptive coexistence has evolved. (Part of a multi-author review).
- Published
- 2008
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16. HTLV-1 and apoptosis: role in cellular transformation and recent advances in therapeutic approaches.
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Taylor JM and Nicot C
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- Apoptosis drug effects, Gene Products, tax physiology, Human T-lymphotropic virus 1 drug effects, Humans, I-kappa B Kinase physiology, Janus Kinases physiology, NF-kappa B antagonists & inhibitors, NF-kappa B physiology, Paraparesis, Tropical Spastic drug therapy, Paraparesis, Tropical Spastic virology, Proto-Oncogene Proteins c-akt physiology, Receptors, Interleukin-2 physiology, Retroviridae Proteins physiology, STAT Transcription Factors physiology, Tretinoin pharmacology, Tumor Suppressor Protein p53 physiology, Viral Regulatory and Accessory Proteins physiology, Apoptosis physiology, Cell Transformation, Viral physiology, Human T-lymphotropic virus 1 physiology, Leukemia-Lymphoma, Adult T-Cell drug therapy, Leukemia-Lymphoma, Adult T-Cell virology
- Abstract
A universal cellular defense mechanism against viral invasion is the elimination of infected cells through apoptotic cell death. To counteract host defenses many viruses have evolved complex apoptosis evasion strategies. The oncogenic human retrovirus HTLV-1 is the etiological agent of adult-T-cell leukemia/lymphoma (ATLL) and the neurodegenerative disease known as HTLV-associated myelopathy/tropical spastic paraparesis (HAM/TSP). The poor prognosis in HTLV-1-induced ATLL is linked to the resistance of neoplastic T cells against conventional therapies and the immuno-compromised state of patients. Nevertheless, several studies have shown that the apoptotic pathway is largely intact and can be reactivated in ATLL tumor cells to induce specific killing. A better understanding of the molecular mechanisms employed by HTLV-1 to counteract cellular death pathways remains an important challenge for future therapies and the treatment of HTLV-1-associated diseases.
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- 2008
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17. Effects of retroviruses on host genome function.
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Jern P and Coffin JM
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- Alternative Splicing, Animals, Biological Evolution, Endogenous Retroviruses genetics, Endogenous Retroviruses pathogenicity, Enhancer Elements, Genetic, Gene Transfer, Horizontal, Humans, Models, Biological, Promoter Regions, Genetic, Retroviridae genetics, Retroviridae Infections genetics, Retroviridae Infections virology, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Host-Pathogen Interactions genetics, Retroviridae pathogenicity
- Abstract
For millions of years, retroviral infections have challenged vertebrates, occasionally leading to germline integration and inheritance as ERVs, genetic parasites whose remnants today constitute some 7% to 8% of the human genome. Although they have had significant evolutionary side effects, it is useful to view ERVs as fossil representatives of retroviruses extant at the time of their insertion into the germline and not as direct players in the evolutionary process itself. Expression of particular ERVs is associated with several positive physiological functions as well as certain diseases, although their roles in human disease as etiological agents, possible contributing factors, or disease markers-well demonstrated in animal models-remain to be established. Here we discuss ERV contributions to host genome structure and function, including their ability to mediate recombination, and physiological effects on the host transcriptome resulting from their integration, expression, and other events.
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- 2008
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18. Impact of viral accessory proteins of SIVsmmPBj on early steps of infection of quiescent cells.
- Author
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Wolfrum N, Mühlebach MD, Schüle S, Kaiser JK, Kloke BP, Cichutek K, and Schweizer M
- Subjects
- Base Sequence, Cell Line, DNA, Viral genetics, Gene Deletion, Genes, Viral, Genetic Complementation Test, Genetic Vectors, HIV genetics, Humans, Monocytes virology, Resting Phase, Cell Cycle, Retroviridae Proteins genetics, Simian Immunodeficiency Virus genetics, Transduction, Genetic, Viral Regulatory and Accessory Proteins genetics, Virus Replication, Retroviridae Proteins physiology, Simian Immunodeficiency Virus pathogenicity, Simian Immunodeficiency Virus physiology, Viral Regulatory and Accessory Proteins physiology
- Abstract
Although lentiviruses like HIV-1 are able to infect non-dividing cells, particular resting cells such as non-stimulated primary peripheral blood mononuclear cells (PBMC) are resistant to infection. In contrast to other lentiviruses, SIVsmmPBj can replicate in non-stimulated PBMC. Moreover, SIVsmmPBj-derived, but not HIV-1-derived, replication-incompetent vectors enable gene transfer into G(0)-arrested human cell lines and primary human monocytes. Here, we demonstrate that transduction of G(0)-arrested cell lines by SIVsmmPBj-derived vectors is independent of the viral accessory proteins Vif, Vpx, Vpr, or Nef. In contrast, for the transduction of primary human monocytes, the Vpx protein proved to be essential. However, trans-complementation of HIV-1 vectors with SIVsmmPBj Vpx did not provide the property of gene transfer into monocytes. Taken together, these data indicate that Vpx is essential for the infection of primary monocytes by SIVsmmPBj. Additionally, further genome functions besides the accessory proteins are required for the particular capacity of SIVsmmPBj in transduction or infection events.
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- 2007
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19. Histone acetyltransferase (HAT) activity of p300 modulates human T lymphotropic virus type 1 p30II-mediated repression of LTR transcriptional activity.
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Michael B, Nair AM, Datta A, Hiraragi H, Ratner L, and Lairmore MD
- Subjects
- CREB-Binding Protein metabolism, Cyclic AMP Response Element-Binding Protein metabolism, Gene Expression Regulation, Viral, HeLa Cells, Human T-lymphotropic virus 1 genetics, Humans, Retroviridae Proteins genetics, Retroviridae Proteins physiology, T-Lymphocytes cytology, T-Lymphocytes immunology, T-Lymphocytes virology, Trans-Activators genetics, Trans-Activators metabolism, Transcription, Genetic physiology, Viral Proteins analysis, p300-CBP Transcription Factors, Cell Cycle Proteins physiology, Histone Acetyltransferases physiology, Human T-lymphotropic virus 1 physiology, Retroviridae Proteins metabolism, Terminal Repeat Sequences physiology, Transcription Factors physiology, Viral Proteins physiology
- Abstract
Human T-lymphotropic virus type-1 (HTLV-1) is a deltaretrovirus that causes adult T cell leukemia/lymphoma, and is implicated in a variety of lymphocyte-mediated inflammatory disorders. HTLV-1 provirus has regulatory and accessory genes in four pX open reading frames. HTLV-1 pX ORF-II encodes two proteins, p13II and p30II, which are incompletely defined in virus replication or pathogenesis. We have demonstrated that pX ORF-II mutations block virus replication in vivo and that ORF-II encoded p30II, a nuclear-localizing protein that binds with CREB-binding protein (CBP)/p300, represses CREB and Tax responsive element (TRE)-mediated transcription. Herein, we have identified p30II motifs important for p300 binding and in regulating TRE-mediated transcription in the absence and presence of HTLV-1 provirus. Within amino acids 100-179 of p30II, a region important for repression of LTR-mediated transcription, we identified a single lysine residue at amino acid 106 (K3) that significantly modulates the ability of p30II to repress TRE-mediated transcription. Exogenous p300, in a dose-responsive manner, reverses p30II-dependent repression of TRE-mediated transcription, in the absence or presence of the provirus, In contrast to wild type p300, p300 HAT mutants (defective in histone acetyltransferase activity) only partially rescued p30(II)-mediated LTR repression. Deacetylation by histone deacetylase-1 (HDAC-1) enhanced p30II-mediated LTR repression, while inhibition of deacetylation by trichostatin A decreases p30(II)-mediated LTR repression. Collectively, our data indicate that HTLV-1 p30II modulates viral gene expression in a cooperative manner with p300-mediated acetylation.
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- 2006
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20. The HTLV-I p30 interferes with TLR4 signaling and modulates the release of pro- and anti-inflammatory cytokines from human macrophages.
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Datta A, Sinha-Datta U, Dhillon NK, Buch S, and Nicot C
- Subjects
- Animals, COS Cells, CREB-Binding Protein physiology, Cell Line, Cell Line, Tumor, Chlorocebus aethiops, DNA-Binding Proteins antagonists & inhibitors, DNA-Binding Proteins metabolism, DNA-Binding Proteins physiology, Humans, Inflammation Mediators physiology, Macrophages virology, Proto-Oncogene Proteins antagonists & inhibitors, Proto-Oncogene Proteins metabolism, Proto-Oncogene Proteins c-ets metabolism, Retroviridae Proteins metabolism, Toll-Like Receptor 4 physiology, Trans-Activators antagonists & inhibitors, Trans-Activators genetics, Trans-Activators metabolism, Two-Hybrid System Techniques, p300-CBP Transcription Factors physiology, Cytokines metabolism, Human T-lymphotropic virus 1 chemistry, Human T-lymphotropic virus 1 physiology, Inflammation Mediators metabolism, Macrophages metabolism, Retroviridae Proteins physiology, Signal Transduction immunology, Toll-Like Receptor 4 antagonists & inhibitors
- Abstract
Whereas adaptive immunity has been extensively studied, very little is known about the innate immunity of the host to HTLV-I infection. HTLV-I-infected ATL patients have pronounced immunodeficiency associated with frequent opportunistic infections, and in these patients, concurrent infections with bacteria and/or parasites are known to increase risks of progression to ATL. The Toll-like receptor-4 (TLR4) activation in response to bacterial infection is essential for dendritic cell maturation and links the innate and adaptive immune responses. Recent reports indicate that TLR4 is targeted by viruses such as RSV, HCV, and MMTV. Here we report that HTLV-I has also evolved a protein that interferes with TLR4 signaling; p30 interacts with and inhibits the DNA binding and transcription activity of PU.1 resulting in the down-regulation of the TLR4 expression from the cell surface. Expression of p30 hampers the release of pro-inflammatory cytokines MCP-1, TNF-alpha, and IL-8 and stimulates release of anti-inflammatory IL-10 following stimulation of TLR4 in human macrophage. Finally, we found that p30 increases phosphorylation and inactivation of GSK3-beta a key step for IL-10 production. Our study suggests a novel function of p30, which may instigate immune tolerance by reducing activation of adaptive immunity in ATL patients.
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- 2006
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21. Deletion of a Cys-His motif from the Alpharetrovirus nucleocapsid domain reveals late domain mutant-like budding defects.
- Author
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Lee EG and Linial ML
- Subjects
- Amino Acid Motifs, Amino Acid Sequence, Animals, Avian Sarcoma Viruses physiology, Avian Sarcoma Viruses ultrastructure, Cell Line, Microscopy, Electron, Molecular Sequence Data, Nucleocapsid Proteins chemistry, Nucleocapsid Proteins physiology, Phenotype, Protein Structure, Tertiary, Quail, Retroviridae Proteins chemistry, Retroviridae Proteins physiology, Sequence Deletion, Transfection, Two-Hybrid System Techniques, Virus Assembly genetics, Avian Sarcoma Viruses genetics, Nucleocapsid Proteins genetics, Retroviridae Proteins genetics
- Abstract
The Rous sarcoma virus (RSV) Gag polyprotein is the only protein required for virus assembly and release. We previously found that deletion of either one of the two Cys-His (CH) motifs in the RSV nucleocapsid (NC) protein did not abrogate Gag-Gag interactions, RNA binding, or packaging but greatly reduced virus production (E-G. Lee, A. Alidina et al., J. Virol. 77: 2010-2020, 2003). In this report, we have further investigated the effects of mutations in the CH motifs on virus assembly and release. Precise deletion of either CH motif, without affecting surrounding basic residues, reduced virus production by approximately 10-fold, similar to levels seen for late (L) domain mutants. Strikingly, transmission electron microscopy revealed that virions of both DeltaCH1 and DeltaCH2 mutants were assembled normally at the plasma membrane but were arrested in budding. Virus particles remained tethered to the membrane or to each other, reminiscent of L domain mutants, although the release defect appears to be independent of the L domain functions. Therefore, two CH motifs are likely to be required for budding independent of a requirement for either Gag-Gag interactions or RNA packaging.
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- 2006
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22. A single amino acid change and truncated TM are sufficient for simian immunodeficiency virus to enter cells using CCR5 in a CD4-independent pathway.
- Author
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Bonavia A, Bullock BT, Gisselman KM, Margulies BJ, and Clements JE
- Subjects
- Amino Acid Substitution, Animals, Antibodies, Viral, Antigens, Viral genetics, CD4 Antigens physiology, Cell Line, Chemokine CCL5 analogs & derivatives, Chemokine CCL5 pharmacology, Epitope Mapping, Genes, Viral, Humans, K562 Cells, Macaca mulatta, Membrane Glycoproteins physiology, Neutralization Tests, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Sequence Deletion, Simian Immunodeficiency Virus drug effects, Simian Immunodeficiency Virus immunology, Solubility, Viral Envelope Proteins physiology, Receptors, CCR5 physiology, Simian Immunodeficiency Virus genetics, Simian Immunodeficiency Virus physiology
- Abstract
Entry of HIV and SIV into susceptible cells is mediated by CD4 and chemokine receptors, which act as coreceptors. To study cell entry of SIV, we constructed a cell line, xKLuSIV, derived from non-susceptible human K562 cells, that express the firefly luciferase reporter gene under control of a minimal SIV long terminal repeat (LTR). Using these susceptible cells, we studied the entry of a well-characterized molecularly cloned macrophage-tropic SIV. xKLuSIV cells that express rhesus macaque CD4 and/or the rhesus chemokine receptor CCR5 are susceptible to infection with the macrophage-tropic, neurovirulent strain SIV/17E-Fr, but only xKLuSIV cells expressing both CCR5 and CD4 were susceptible to infection by the macrophage-tropic, non-neurovirulent strain SIV/17E-Cl. CCR5-dependent, CD4-independent infection by SIV/17E-Fr was abrogated by pre-incubation of the cells with AOP-RANTES, a ligand for CCR5. In addition to viral entry occurring by a CD4-independent mechanism, neutralization of SIV/17E-Fr with rhesus mAbs from 3 different neutralization groups blocked entry into x KLuSIV cells by both CD4-dependent and -independent mechanisms. Triggering the env glycoprotein of SIV-17 EFr with soluble CD4 had no significant effect in infectivity, but triggering of the same glycoprotein of SIV/17E-Cl allowed it to enter cells in a CD4-independent fashion. Using mutant molecular clones, we studied the determinants for CD4 independence, all of which are confined to the env gene. We report here that truncation of the TM at amino acid 764 and changing a single amino acid (R751G) in the SIV envelope transmembrane protein (TM) conferred the observed CD4-independent phenotype. Our data suggest that the envelope from the neurovirulent SIV/17E-Fr interacts with CCR5 in a CD4-independent manner, and changes in the TM protein of this virus are important components that contribute to neurovirulence in SIV.
- Published
- 2005
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23. Retroviral superinfection resistance.
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Nethe M, Berkhout B, and van der Kuyl AC
- Subjects
- Animals, CD4 Antigens physiology, CD8-Positive T-Lymphocytes immunology, Gene Products, env physiology, Humans, Membrane Proteins genetics, Membrane Proteins physiology, Proteins genetics, Proteins physiology, Retroviridae Proteins physiology, TRPV Cation Channels physiology, HIV Infections immunology, Leukemia Virus, Murine, Retroviridae Infections immunology, Spumavirus, Viral Interference
- Abstract
The retroviral phenomenon of superinfection resistance (SIR) defines an interference mechanism that is established after primary infection, preventing the infected cell from being superinfected by a similar type of virus. This review describes our present understanding of the underlying mechanisms of SIR established by three characteristic retroviruses: Murine Leukaemia Virus (MuLV), Foamy Virus (FV), and Human Immunodeficiency Virus (HIV). In addition, SIR is discussed with respect to HIV superinfection of humans. MuLV resistant mice exhibit two genetic resistance traits related to SIR. The cellular Fv4 gene expresses an Env related protein that establishes resistance against MuLV infection. Another mouse gene (Fv1) mediates MuLV resistance by expression of a sequence that is distantly related to Gag and that blocks the viral infection after the reverse transcription step. FVs induce two distinct mechanisms of superinfection resistance. First, expression of the Env protein results in SIR, probably by occupancy of the cellular receptors for FV entry. Second, an increase in the concentration of the viral Bet (Between-env-and-LTR-1-and-2) protein reduces proviral FV gene expression by inhibition of the transcriptional activator protein Tas (Transactivator of spumaviruses). In contrast to SIR in FV and MuLV infection, the underlying mechanism of SIR in HIV-infected cells is poorly understood. CD4 receptor down-modulation, a major characteristic of HIV-infected cells, has been proposed to be the main mechanism of SIR against HIV, but data have been contradictory. Several recent studies report the occurrence of HIV superinfection in humans; an event associated with the generation of recombinant HIV strains and possibly with increased disease progression. The role of SIR in protecting patients from HIV superinfection has not been studied so far. The phenomenon of SIR may also be important in the protection of primates that are vaccinated with live attenuated simian immunodeficiency virus (SIV) against pathogenic SIV variants. As primate models of SIV infection closely resemble HIV infection, a better knowledge of SIR-induced mechanisms could contribute to the development of an HIV vaccine or other antiviral strategies.
- Published
- 2005
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24. Foamy virus Bet proteins function as novel inhibitors of the APOBEC3 family of innate antiretroviral defense factors.
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Russell RA, Wiegand HL, Moore MD, Schäfer A, McClure MO, and Cullen BR
- Subjects
- APOBEC-3G Deaminase, Animals, Base Sequence, Cells, Cultured, Cytidine Deaminase, Gene Products, gag metabolism, Humans, Immunity, Innate, Molecular Sequence Data, Mutation, Nucleoside Deaminases, Primates virology, Repressor Proteins, Virus Assembly, HIV-1 immunology, Proteins antagonists & inhibitors, Retroviridae Proteins physiology, Spumavirus immunology
- Abstract
Foamy viruses are a family of complex retroviruses that establish common, productive infections in a wide range of nonhuman primates. In contrast, humans appear nonpermissive for foamy virus replication, although zoonotic infections do occur. Here we have analyzed the ability of primate and mouse APOBEC3G proteins to inhibit the infectivity of primate foamy virus (PFV) virions produced in their presence. We demonstrate that several APOBEC3 proteins can potently inhibit the infectivity of a PFV-based viral vector. This inhibition correlated with the packaging of inhibitory APOBEC3 proteins into PFV virions, due to a specific PFV Gag/APOBEC3 interaction, and resulted in the G to A hypermutation of PFV reverse transcripts. While inhibition of PFV virion infectivity by primate APOBEC3 proteins was largely relieved by coexpression of the PFV Bet protein, a cytoplasmic auxiliary protein of previously uncertain function, Bet failed to relieve inhibition caused by murine APOBEC3. PFV Bet bound to human, but not mouse, APOBEC3 proteins in coexpressing cells, and this binding correlated with the specific inhibition of their incorporation into PFV virions. Of note, both PFV Bet and a second Bet protein, derived from an African green monkey foamy virus, rescued the infectivity of Vif-deficient human immunodeficiency virus type 1 (HIV-1) virions produced in the presence of African green monkey APOBEC3G and blocked the incorporation of this host factor into HIV-1 virion particles. However, neither foamy virus Bet protein reduced APOBEC3 protein expression levels in virion producer cells. While these data identify the foamy virus Bet protein as a functional ortholog of the HIV-1 Vif auxiliary protein, they also indicate that Vif and Bet block APOBEC3 protein function by distinct mechanisms.
- Published
- 2005
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25. Expression of a novel human retroviral NP9 gene and potential roles of its protein in systemic lupus erythematosus patients.
- Author
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Ren YZ, Dai QD, and Xu RZ
- Subjects
- Amino Acid Sequence, Computational Biology, Endogenous Retroviruses genetics, Endogenous Retroviruses metabolism, Humans, Lupus Erythematosus, Systemic genetics, Lupus Erythematosus, Systemic virology, Molecular Sequence Data, Retroviridae Proteins genetics, Retroviridae Proteins metabolism, Reverse Transcriptase Polymerase Chain Reaction, Lupus Erythematosus, Systemic physiopathology, Retroviridae Proteins physiology
- Abstract
Objective: To investigate the expression of a novel retroviral (NP9) gene transcripts and the possible role of its protein in systemic lupus erythematosus (SLE) patients., Methods: The retroviral NP9 gene in SLE patients was isolated and cloned using RT-PCR and TA cloning techniques, and it was analyzed by sequencing. The expression of the NP9 genes in 40 patients with SLE and 48 normal controls using RT-PCR was detected. NCBI BLAST and DNASIS 3.1 software were used to analyze the features of protein of NP9 gene., Results: The positive ratio (77.5%) of the mRNA expression of the retroviral NP9 gene in SLE patients is significantly higher than that (8.3%) in normal subjects (P<0.01). The recombinant NP9 protein comprises 74 AA with pI 9.59. Amino acid sequence analysis indicates that the retroviral NP9 protein shares higher homologies with several human proteins with important biological functions., Conclusion: SLE patients possess specific novel retroviral NP9 transcripts. The expression of the retroviral NP9 gene may involve in the genesis or development of SLE.
- Published
- 2005
26. Vif is an auxiliary factor of the HIV-1 reverse transcriptase and facilitates abasic site bypass.
- Author
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Cancio R, Spadari S, and Maga G
- Subjects
- DNA-Directed RNA Polymerases metabolism, HIV-1 enzymology, HIV-1 genetics, Kinetics, Nucleic Acids metabolism, Peptides physiology, Protein Binding physiology, Protein Structure, Tertiary, RNA-Directed DNA Polymerase metabolism, Recombinant Proteins metabolism, Retroviridae Proteins physiology, Substrate Specificity, Templates, Genetic, Thermodynamics, vif Gene Products, Human Immunodeficiency Virus, DNA Primers metabolism, DNA, Viral metabolism, Gene Products, vif physiology, HIV Reverse Transcriptase metabolism, Purines metabolism, Pyrimidines metabolism, RNA, Viral metabolism
- Abstract
The HIV-1 accessory protein Vif was found to modulate the RNA- and DNA-dependent DNA synthesis activity of the viral RT (reverse transcriptase) in two ways: (i) it stimulated the binding of the viral RT to the primer by increasing the association rate kcat/K(m) and by decreasing the thermodynamic barrier DeltaH([ES]) for complex formation, and (ii) it increased the polymerization rate of HIV-1 RT. A Vif mutant lacking the final 56 amino acids at the C-terminus failed to stimulate the viral RT. On the other hand, another Vif mutant lacking the first 43 amino acids at the N-terminus, which are involved in RNA binding and interaction with the viral protease, was able to stimulate RT activity. In addition, Vif was found to promote the bypass of an abasic site by HIV-1 RT.
- Published
- 2004
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27. [Advances in the immunopathology of HIV infection].
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Alcamí J
- Subjects
- Apoptosis, CD4-Positive T-Lymphocytes virology, Cytopathogenic Effect, Viral, Cytotoxicity, Immunologic, Disease Progression, Epitopes genetics, HIV genetics, HIV immunology, HIV physiology, HIV Antibodies immunology, HIV Antigens genetics, HIV Infections pathology, HIV Infections virology, Humans, Models, Immunological, Models, Molecular, Receptors, HIV chemistry, Receptors, HIV physiology, Retroviridae Proteins physiology, Virus Activation, Virus Latency, HIV Infections immunology
- Abstract
The progressive and irreversible destruction of the immune system represents the hallmark of HIV infection. Even though this process is directly related to the infection of CD4 lymphocytes, the destruction of this lymphocyte population observed along infection is not solely due to a direct cytopathic effect elicited by HIV replication. AIDS immune pathogenesis is an extremely complex phenomenon involving different mechanisms which are not fully understood yet. In this article the mechanisms involved in HIV infection and destruction of target cells and the immune response elicited by HIV are analysed. Finally, viral escape mechanisms to host immune response are considered.
- Published
- 2004
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28. Feline foamy virus Tas protein is a DNA-binding transactivator.
- Author
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Omoto S, Brisibe EA, Okuyama H, and Fujii YR
- Subjects
- Animals, Base Sequence, Cats, HIV Long Terminal Repeat, Humans, Molecular Sequence Data, Promoter Regions, Genetic, Spumavirus chemistry, Terminal Repeat Sequences, DNA-Binding Proteins physiology, Retroviridae Proteins physiology, Spumavirus genetics, Trans-Activators physiology
- Abstract
Foamy viruses (FVs) harbour a transcriptional transactivator (Tas) and two Tas-responsive promoter regions, one in the 5' long terminal repeat (LTR) and the other an internal promoter (IP) in the envelope gene. To analyse the mechanism of transactivation of the FVs, the specificity of feline FV (FFV) Tas protein, which is more distantly related to the respective proteins of non-human primate origin, were investigated. FFV Tas has been shown specifically to activate gene expression from the cognate promoters. No cross-transactivation was noted of the prototype foamy virus and human immunodeficiency virus type 1 LTR. The putative transactivation response element of FFV Tas was mapped to the 5' LTR U3 region (approximately nt -228 to -195). FFV Tas binds to this element in addition to a previously described sequence (position -66 to -51). It is therefore concluded that FFV Tas is a DNA-binding transactivator that interacts with at least two regions in the virus LTR.
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- 2004
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29. Coactivators p300 and PCAF physically and functionally interact with the foamy viral trans-activator.
- Author
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Bannert H, Muranyi W, Ogryzko VV, Nakatani Y, and Flügel RM
- Subjects
- Cell Line, Cell Line, Tumor, DNA-Binding Proteins physiology, HeLa Cells chemistry, HeLa Cells metabolism, Histone Acetyltransferases, Humans, Kidney chemistry, Kidney cytology, Kidney embryology, Kidney metabolism, Mutation genetics, Mutation physiology, Peptides metabolism, Protein Interaction Mapping methods, Protein Structure, Tertiary, Response Elements genetics, Retroviridae Proteins physiology, Spumavirus genetics, Trans-Activators physiology, p300-CBP Transcription Factors, Acetyltransferases metabolism, Cell Cycle Proteins metabolism, DNA-Binding Proteins metabolism, Nuclear Proteins metabolism, Retroviridae Proteins metabolism, Trans-Activators metabolism, Transcription Factors metabolism, Transcriptional Activation genetics
- Abstract
Background: Foamy virus Bel1/Tas trans-activators act as key regulators of gene expression and directly bind to Bel1 response elements (BRE) in both the internal and the 5'LTR promoters leading to strong transcriptional trans-activation. Cellular coactivators interacting with Bel1/Tas are unknown to date., Results: Transient expression assays, co-immunoprecipitation experiments, pull-down assays, and Western blot analysis were used to demonstrate that the coactivator p300 and histone acetyltransferase PCAF specifically interact with the retroviral trans-activator Bel1/Tas in vivo. Here we show that the Bel1/Tas-mediated trans-activation was enhanced by the coactivator p300, histone acetyltransferases PCAF and SRC-1 based on the crucial internal promoter BRE. The Bel1/Tas-interacting region was mapped to the C/H1 domain of p300 by co-immunoprecipitation and pull-down assays. In contrast, coactivator SRC-1 previously reported to bind to the C-terminal domain of p300 did not directly interact with the Bel1 protein but nevertheless enhanced Bel1/Tas-mediated trans-activation. Cotransfection of Bel1/Tas and p300C with an expression plasmid containing the C/H1domain partially inhibited the p300C-driven trans-activation., Conclusions: Our data identify p300 and PCAF as functional partner molecules that directly interact with Bel1/Tas. Since the acetylation activities of the three coactivators reside in or bind to the C-terminal regions of p300, a C/H1 expression plasmid was used as inhibitor. This is the first report of a C/H1 domain-interacting retroviral trans-activator capable of partially blocking the strong Bel1/Tas-mediated activation of the C-terminal region of coactivator p300. The potential mechanisms and functional roles of the three histone and factor acetyltransferases p300, PCAF, and SRC-1 in Bel1/Tas-mediated trans-activation are discussed.
- Published
- 2004
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30. A single amino acid change in gp41 is linked to the macrophage-only replication phenotype of a molecular clone of simian immunodeficiency virus derived from the brain of a macaque with neuropathogenic infection.
- Author
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Glenn AA and Novembre FJ
- Subjects
- Amino Acid Sequence, Amino Acid Substitution, Animals, Base Sequence, Brain virology, Cells, Cultured, DNA, Viral genetics, Disease Models, Animal, Humans, Macaca nemestrina, Membrane Glycoproteins isolation & purification, Molecular Sequence Data, Mutagenesis, Site-Directed, Phenotype, Retroviridae Proteins isolation & purification, Sequence Homology, Amino Acid, Simian Immunodeficiency Virus pathogenicity, Virulence genetics, Virus Replication genetics, Macrophages virology, Membrane Glycoproteins genetics, Membrane Glycoproteins physiology, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Simian Acquired Immunodeficiency Syndrome virology, Simian Immunodeficiency Virus genetics, Simian Immunodeficiency Virus physiology
- Abstract
Simian immunodeficiency virus (SIV)-related neuropathogenesis has been observed in 90% of pig-tailed macaques infected with strain SIVsmmFGb, making it an excellent system for studying human immunodeficiency virus (HIV)-associated neurological disease. To investigate the genetics of SIV neurovirulence, infectious molecular clones were generated from the brain of a SIVsmmFGb-infected pig-tailed macaque. One clone, BPZm.12, displayed a macrophage-restricted phenotype not previously described; this clone replicated to high levels in macrophages, but did not replicate in peripheral blood mononuclear cells (PBMC) until at least 21 days postinfection. Sequence analysis of the env gene of BPZm.12 revealed the substitution of a serine residue for a highly conserved proline residue at position 629 in gp41. A mutant clone, which contained the conserved proline to serine (BPZm.12-629P), was able to replicate in both macrophages and PBMC without delay. A mutant of an unrelated dual tropic molecular clone PBj6.6, substituting proline for serine (PBj6.6-629S), replicated to high levels in macrophages, but did not replicate in PBMC at any time point. These data indicated that a single determinant in gp41 of an SIV clone changed its phenotype from macrophage tropic to dual tropic.
- Published
- 2004
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31. Suppression of tumor growth and cell proliferation by p13II, a mitochondrial protein of human T cell leukemia virus type 1.
- Author
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Silic-Benussi M, Cavallari I, Zorzan T, Rossi E, Hiraragi H, Rosato A, Horie K, Saggioro D, Lairmore MD, Willems L, Chieco-Bianchi L, D'Agostino DM, and Ciminale V
- Subjects
- Base Sequence, Blotting, Western, Cell Cycle physiology, DNA Primers, Fluorescent Antibody Technique, HeLa Cells, Human T-lymphotropic virus 1 metabolism, Humans, Jurkat Cells, Retroviridae Proteins metabolism, Cell Division physiology, Human T-lymphotropic virus 1 physiology, Mitochondria metabolism, Retroviridae Proteins physiology
- Abstract
Human T cell leukemia virus type 1 encodes an "accessory" protein named p13(II) that is targeted to mitochondria and triggers a rapid flux of K(+) and Ca(2+) across the inner membrane. In this study, we investigated the effects of p13(II) on tumorigenicity in vivo and on cell growth in vitro. Results showed that p13(II) significantly reduced the incidence and growth rate of tumors arising from c-myc and Ha-ras-cotransfected rat embryo fibroblasts. Consistent with these findings, HeLa-derived cell lines stably expressing p13(II) exhibited markedly reduced tumorigenicity, as well as reduced proliferation at high density in vitro. Mixed culture assays revealed that the phenotype of the p13(II) cell lines was dominant over that of control lines and was mediated by a heat-labile soluble factor. The p13(II) cell lines exhibited an enhanced response to Ca(2+)-mediated stimuli, as measured by increased sensitivity to C2-ceramide-induced apoptosis and by cAMP-responsive element-binding protein (CREB) phosphorylation in response to histamine. p13(II)-expressing Jurkat T cells also exhibited reduced proliferation, suggesting that the protein might exert similar effects in T cells, the primary target of HTLV-1 infection. These findings provide clues into the function of p13(II) as a negative regulator of cell growth and underscore a link between mitochondria, Ca(2+) signaling, and tumorigenicity.
- Published
- 2004
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32. Human T-cell lymphotropic virus type 1 open reading frame II-encoded p30II is required for in vivo replication: evidence of in vivo reversion.
- Author
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Silverman LR, Phipps AJ, Montgomery A, Ratner L, and Lairmore MD
- Subjects
- Animals, Antibodies, Viral biosynthesis, Base Sequence, Cell Line, DNA, Viral genetics, Genes, Viral, HTLV-I Infections immunology, HTLV-I Infections virology, Human T-lymphotropic virus 1 immunology, Human T-lymphotropic virus 1 pathogenicity, Humans, In Vitro Techniques, Leukocytes, Mononuclear virology, Open Reading Frames, Polymerase Chain Reaction, Proviruses genetics, Proviruses isolation & purification, Rabbits, Virus Replication genetics, Virus Replication physiology, Human T-lymphotropic virus 1 genetics, Human T-lymphotropic virus 1 physiology, Retroviridae Proteins genetics, Retroviridae Proteins physiology
- Abstract
Human T-cell lymphotropic virus type 1 (HTLV-1) causes adult T-cell leukemia/lymphoma and exhibits high genetic stability in vivo. HTLV-1 contains four open reading frames (ORFs) in its pX region. ORF II encodes two proteins, p30(II) and p13(II), both of which are incompletely characterized. p30(II) localizes to the nucleus or nucleolus and has distant homology to the transcription factors Oct-1, Pit-1, and POU-M1. In vitro studies have demonstrated that at low concentrations, p30(II) differentially regulates cellular and viral promoters through an interaction with CREB binding protein/p300. To determine the in vivo significance of p30(II), we inoculated rabbits with cell lines expressing either a wild-type clone of HTLV-1 (ACH.1) or a clone containing a mutation in ORF II, which eliminated wild-type p30(II) expression (ACH.30.1). ACH.1-inoculated rabbits maintained higher HTLV-1-specific antibody titers than ACH.30.1-inoculated rabbits, and all ACH.1-inoculated rabbits were seropositive for HTLV-1, whereas only two of six ACH.30.1-inoculated rabbits were seropositive. Provirus could be consistently PCR amplified from peripheral blood mononuclear cell (PBMC) DNA in all ACH.1-inoculated rabbits but in only three of six ACH.30.1-inoculated rabbits. Quantitative competitive PCR indicated higher PBMC proviral loads in ACH.1-inoculated rabbits. Interestingly, sequencing of ORF II from PBMC of provirus-positive ACH.30.1-inoculated rabbits revealed a reversion to wild-type sequence with evidence of early coexistence of mutant and wild-type sequence. Our data provide evidence that HTLV-1 must maintain its key accessory genes to survive in vivo and that in vivo pressures select for maintenance of wild-type ORF II gene products during the early course of infection.
- Published
- 2004
- Full Text
- View/download PDF
33. Envelope glycoprotein determinants of increased entry in a pathogenic simian-human immunodeficiency virus (SHIV-HXBc2P 3.2) passaged in monkeys.
- Author
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Si Z, Gorry P, Babcock G, Owens CM, Cayabyab M, Phan N, and Sodroski J
- Subjects
- Animals, HIV Envelope Protein gp120 genetics, HIV Envelope Protein gp120 physiology, HIV Envelope Protein gp41 genetics, HIV Envelope Protein gp41 physiology, HIV-1 genetics, Humans, In Vitro Techniques, Leukocytes, Mononuclear virology, Macaca mulatta, Membrane Glycoproteins genetics, Membrane Glycoproteins physiology, Receptors, CXCR4 physiology, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins physiology, Recombination, Genetic, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Simian Immunodeficiency Virus genetics, Viral Envelope Proteins genetics, Virulence, Virus Replication, HIV-1 pathogenicity, HIV-1 physiology, Simian Immunodeficiency Virus pathogenicity, Simian Immunodeficiency Virus physiology, Viral Envelope Proteins physiology
- Abstract
Passage of a nonpathogenic simian-human immunodeficiency virus (SHIV-HXBc2) in monkeys resulted in changes in the viral envelope glycoproteins that are responsible for a dramatic increase in replication and pathogenicity in vivo. Here, we show that the envelope glycoproteins of the pathogenic SHIV-HXBc2P 3.2 mediate virus entry into rhesus monkey peripheral blood mononuclear cells (PBMC) more efficiently than the parental SHIV-HXBc2 envelope glycoproteins, and study the basis for this increase. Both parental and pathogenic SHIVs exclusively use CXCR4 as a coreceptor. The determinants of the increased entry associated with the SHIV-HXBc2P 3.2 envelope glycoproteins are located in both the gp120 and gp41 subunits. Changes in the gp120 V3 variable loop specify a decreased sensitivity to SDF-1, consistent with an increase in the affinity of the HXBc2P 3.2 gp120 glycoprotein for CXCR4. Thus, multiple changes in the gp120 variable loops and the gp41 ectodomain of a pathogenic SHIV cooperate to allow enhanced replicative capacity, which in part results from increased chemokine receptor binding.
- Published
- 2004
- Full Text
- View/download PDF
34. Mitochondrial alterations induced by the p13II protein of human T-cell leukemia virus type 1. Critical role of arginine residues.
- Author
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D'Agostino DM, Ranzato L, Arrigoni G, Cavallari I, Belleudi F, Torrisi MR, Silic-Benussi M, Ferro T, Petronilli V, Marin O, Chieco-Bianchi L, Bernardi P, and Ciminale V
- Subjects
- Amino Acid Sequence, Arginine, Humans, Membrane Potentials, Mitochondria chemistry, Mitochondria physiology, Molecular Sequence Data, Peptide Fragments physiology, Protein Folding, Protein Structure, Secondary, Retroviridae Proteins analysis, Retroviridae Proteins chemistry, Structure-Activity Relationship, Human T-lymphotropic virus 1 chemistry, Mitochondrial Swelling, Retroviridae Proteins physiology
- Abstract
Human T-cell leukemia virus type 1 encodes a number of "accessory" proteins of unclear function; one of these proteins, p13(II), is targeted to mitochondria and disrupts mitochondrial morphology. The present study was undertaken to unravel the function of p13(II) through (i) determination of its submitochondrial localization and sequences required to alter mitochondrial morphology and (ii) an assessment of the biophysical and biological properties of synthetic peptides spanning residues 9-41 (p13(9-41)), which include the amphipathic mitochondrial-targeting sequence of the protein. p13(9-41) folded into an alpha helix in micellar environments. Fractionation and immunogold labeling indicated that full-length p13(II) accumulates in the inner mitochondrial membrane. p13(9-41) induced energy-dependent swelling of isolated mitochondria by increasing inner membrane permeability to small cations (Na(+), K(+)) and released Ca(2+) from Ca(2+)-preloaded mitochondria. These effects as well as the ability of full-length p13(II) to alter mitochondrial morphology in cells required the presence of four arginines, forming the charged face of the targeting signal. The mitochondrial effects of p13(9-41) were insensitive to cyclosporin A, suggesting that full-length p13(II) might alter mitochondrial permeability through a permeability transition pore-independent mechanism, thus distinguishing it from the mitochondrial proteins Vpr and X of human immunodeficiency virus type 1 and hepatitis B virus, respectively.
- Published
- 2002
- Full Text
- View/download PDF
35. Rec (formerly Corf) function requires interaction with a complex, folded RNA structure within its responsive element rather than binding to a discrete specific binding site.
- Author
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Magin-Lachmann C, Hahn S, Strobel H, Held U, Löwer J, and Löwer R
- Subjects
- Base Sequence, Binding Sites, Cell Nucleus metabolism, Gene Products, rev physiology, Gene Products, rex physiology, Molecular Sequence Data, RNA metabolism, Terminal Repeat Sequences, Endogenous Retroviruses genetics, RNA chemistry, Response Elements, Retroviridae Proteins physiology
- Abstract
It was recently reported that the human endogenous retrovirus HTDV/HERV-K encodes the regulatory protein Rec (formerly designated Corf), which is functionally equivalent to the nuclear export adapter proteins Rev of human immunodeficiency virus and Rex of human T-cell leukemia virus. We have demonstrated that the Rec protein interacts with a characteristic 429-nucleotide RNA element, the Rec-responsive element (RcRE), present in the 3' long terminal repeat of HTDV/HERV-K transcripts. In analogy to the Rev and Rex proteins, which have distinct RNA binding sites in their responsive elements, we have proposed that Rec may also have a defined binding site in the RcRE. In this report, we demonstrate that not every HTDV/HERV-K copy present in the human genome contains an active RcRE, and we characterize mutations that abrogate Rec function. In addition, we demonstrate that Rec function requires binding to a complex, folded RNA structure rather than binding to a discrete specific binding site, in contrast to Rev and Rex and their homologous responsive elements. We define four stem-loop structures in the RcRE that are essential for Rec function. Finally, we demonstrate that both Rev and Rex can mediate nuclear export through the RcRE but that their binding sites are different from each other and from that of Rec.
- Published
- 2001
- Full Text
- View/download PDF
36. Functional analysis of the simian immunodeficiency virus Vpx protein: identification of packaging determinants and a novel nuclear targeting domain.
- Author
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Mahalingam S, Van Tine B, Santiago ML, Gao F, Shaw GM, and Hahn BH
- Subjects
- Amino Acid Sequence, Cell Nucleus metabolism, HeLa Cells, Humans, Macrophages virology, Molecular Sequence Data, Structure-Activity Relationship, Viral Regulatory and Accessory Proteins chemistry, Viral Regulatory and Accessory Proteins genetics, Virus Replication, Retroviridae Proteins physiology, Simian Immunodeficiency Virus physiology, Viral Regulatory and Accessory Proteins physiology, Virus Assembly
- Abstract
The vpx gene products of human immunodeficiency virus type 2 (HIV-2) and of the closely related simian immunodeficiency viruses from sooty mangabeys (SIVsm) and macaques (SIVmac) comprise a 112-amino-acid virion-associated protein that is critical for efficient virus replication in nondividing cells such as macrophages. When expressed in the absence of other viral proteins, Vpx localizes to the nuclear membrane as well as to the nucleus; however, in the context of virus replication Vpx is packaged into virions via interaction with the p6 domain of the Gag precursor polyprotein (p55(gag)). To identify the domains essential for virion incorporation and nuclear localization, site-directed mutations were introduced into the vpx gene of SIVsmPBj1.9 and functionally analyzed. Our results show that (i) mutation of two highly conserved L74 and I75 residues impaired both virion incorporation and nuclear localization of Vpx; (ii) substitution of conserved H82, G86, C87, P103, and P106 residues impaired Vpx nuclear localization but not virion incorporation; (iii) mutations of conserved Y66, Y69, and Y71 residues impaired virion incorporation but not the translocation of Vpx to the nucleus; and (iv) a mutation at E30 (predicted to disrupt an N-terminal alpha-helix) had no effect on either virion incorporation or nuclear localization of Vpx. Importantly, mutations in Vpx which impaired nuclear localization also reduced virus replication in macaque macrophages, suggesting an important role of the carboxyl terminus of Vpx in nuclear translocation of the viral preintegration complex. Analyzing this domain in greater detail, we identified a 26-amino-acid (aa 60 to 85) fragment that was sufficient to mediate the transport of a heterologous protein (green fluorescent protein [GFP]) to the nucleus. Taken together, these results indicate that virion incorporation and nuclear localization are encoded by two partially overlapping domains in the C-terminus of Vpx (aa 60 to 112). The identification of a novel 26-amino-acid nuclear targeting domain provides a new tool to investigate the nuclear import of the HIV-2/SIV preintegration complex.
- Published
- 2001
- Full Text
- View/download PDF
37. Human immunodeficiency virus and AIDS: insights from animal lentiviruses.
- Author
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Miller RJ, Cairns JS, Bridges S, and Sarver N
- Subjects
- Animals, Genes, Viral, Humans, Lentivirus genetics, Lentivirus physiology, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Disease Models, Animal, HIV Infections immunology, HIV Infections virology, Lentivirus pathogenicity, Lentivirus Infections immunology, Lentivirus Infections virology
- Published
- 2000
- Full Text
- View/download PDF
38. Foamy viruses are unconventional retroviruses.
- Author
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Linial ML
- Subjects
- DNA-Binding Proteins physiology, Gene Products, env physiology, Gene Products, gag physiology, Gene Products, pol physiology, Genome, Viral, Retroviridae Proteins physiology, Spumavirus chemistry, Spumavirus genetics, Trans-Activators physiology, Virus Replication, Spumavirus physiology
- Published
- 1999
- Full Text
- View/download PDF
39. Cells expressing the human foamy virus (HFV) accessory Bet protein are resistant to productive HFV superinfection.
- Author
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Bock M, Heinkelein M, Lindemann D, and Rethwilm A
- Subjects
- Animals, Cats, Clone Cells, Genetic Vectors genetics, Humans, Kidney, Mammals, Promoter Regions, Genetic genetics, Proviruses, Receptors, Virus analysis, Retroviridae genetics, Retroviridae Proteins genetics, Transfection, Virus Replication, Retroviridae Proteins physiology, Spumavirus physiology, Viral Interference physiology
- Abstract
Bet is a foamy virus (FV) accessory protein not required for virus replication. The function of Bet is not understood. We report on the generation of cell lines stably expressing the HFV Bet protein. In Bet+ cells, HFV replication was reduced by approximately 3-4 orders of magnitude compared with control cells. The HFV Bet-expressing cells only partially resisted infection by the distantly related feline FV (FFV). Pseudotyping experiments, using murine retroviral vectors with an HFV envelope, revealed that the resistance was not due to downregulation of the unknown HFV receptor. In transfection experiments, using proviral reporter gene constructs and infectious proviruses, no significant differences were detected between Bet+ and control cells. In infection experiments, HFV vectors expressing an indicator gene under control of the HFV promoters showed no activity in Bet+ cells. The results are best compatible with the hypothesis that the main block to productive superinfection of Bet+ cells occurs at an early stage of replication between virus entry and provirus establishment. We suggest that inhibition of provirus integration by Bet protein may serve a distinct function in the unique foamy virus replication cycle., (Copyright 1998 Academic Press.)
- Published
- 1998
- Full Text
- View/download PDF
40. Retroviral matrix proteins: a structural perspective.
- Author
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Conte MR and Matthews S
- Subjects
- Animals, Humans, Protein Conformation, Retroviridae Proteins physiology, Viral Matrix Proteins physiology, Retroviridae Proteins chemistry, Viral Matrix Proteins chemistry
- Published
- 1998
- Full Text
- View/download PDF
41. Functional domains in the retroviral transmembrane protein.
- Author
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Zhao Y, Zhu L, Benedict CA, Chen D, Anderson WF, and Cannon PM
- Subjects
- 3T3 Cells, Amino Acid Sequence, Animals, Mice, Molecular Sequence Data, Mutation, Retroviridae Proteins physiology, Viral Fusion Proteins physiology, Moloney murine leukemia virus chemistry, Retroviridae Proteins chemistry, Viral Envelope Proteins chemistry
- Abstract
The envelope glycoproteins of the mammalian type C retroviruses consist of two subunits, a surface (SU) protein and a transmembrane (TM) protein. SU binds to the viral receptor and is thought to trigger conformational changes in the associated TM protein that ultimately lead to the fusion of viral and host cell membranes. For Moloney murine leukemia virus (MoMuLV), the envelope protein probably exists as a trimer. We have previously demonstrated that the coexpression of envelope proteins that are individually defective in either the SU or TM subunits can lead to functional complementation (Y. Zhao et al., J. Virol. 71:6967-6972, 1997). We have now extended these studies to investigate the abilities of a panel of fusion-defective TM mutants to complement each other. This analysis identified distinct complementation groups within TM, with implications for interactions between different regions of TM in the fusion process. In viral particles, the C-terminal 16 amino acids of the MoMuLV TM (the R peptide) are cleaved by the viral protease, resulting in an increased fusogenicity of the envelope protein. We have examined the consequences of R peptide cleavage for the different TM fusion mutants and have found that this enhancement of fusogenicity can only occur in cis to certain of the TM mutants. These results suggest that R peptide cleavage enhances the fusogenicity of the envelope protein by influencing the interaction of two distinct regions in the TM ectodomain.
- Published
- 1998
- Full Text
- View/download PDF
42. Nonreciprocal pseudotyping: murine leukemia virus proteins cannot efficiently package spleen necrosis virus-based vector RNA.
- Author
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Certo JL, Shook BF, Yin PD, Snider JT, and Hu WS
- Subjects
- Cell Line, Genetic Vectors, Repetitive Sequences, Nucleic Acid, Leukemia Virus, Murine physiology, RNA, Viral analysis, Reticuloendotheliosis Viruses, Avian physiology, Retroviridae Proteins physiology, Virus Assembly
- Abstract
It has been documented that spleen necrosis virus (SNV) can package murine leukemia virus (MLV) RNA efficiently and propagate MLV vectors to the same titers as it propagates SNV-based vectors. Although the SNV packaging signal (E) and MLV packaging signal (Psi) have little sequence homology, similar double-hairpin RNA structures were predicted and supported by experimental evidence. To test whether SNV RNA can be packaged by MLV proteins, we modified an SNV vector to be expressed in an MLV-based murine helper cell line. Surprisingly, we found that MLV proteins could not support the replication of SNV vectors. The decrease in titer was approximately 2,000- to 20,000-fold in one round of retroviral replication. RNA analysis revealed that SNV RNA was not efficiently packaged by MLV proteins. RNA hybridization of the cellular and viral RNAs indicated that SNV RNA was packaged at least 25-fold less efficiently than MLV RNA, which was the sensitivity limit of the hybridization assay. The contrast between the MLV and SNV packaging specificity is striking. SNV proteins can recognize both SNV E and MLV Psi, but MLV can recognize only MLV Psi. This is the first demonstration of two retroviruses with nonreciprocal packaging specificities.
- Published
- 1998
- Full Text
- View/download PDF
43. [Role of virus specific protease on virion morphogenesis].
- Author
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Yoshinaka Y and Katoh I
- Subjects
- Amino Acid Sequence, Animals, Humans, Molecular Sequence Data, Neomycin pharmacology, Protease Inhibitors pharmacology, Retroviridae enzymology, Retroviridae genetics, Retroviridae Proteins chemistry, Retroviridae Proteins physiology, Endopeptidases genetics, Endopeptidases physiology, Retroviridae physiology, Virion physiology
- Published
- 1998
44. Functional differences between the human LINE retrotransposon and retroviral reverse transcriptases for in vivo mRNA reverse transcription.
- Author
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Dhellin O, Maestre J, and Heidmann T
- Subjects
- 3T3 Cells, Animals, Cats, Cell Line, Genes, Reporter, Humans, Mice, Open Reading Frames, Proviruses enzymology, Pseudogenes, Repetitive Sequences, Nucleic Acid, Ribonuclease H chemistry, Ribonuclease H genetics, Transfection, DNA, Complementary biosynthesis, DNA, Viral biosynthesis, HIV Reverse Transcriptase physiology, Moloney murine leukemia virus physiology, RNA, Messenger genetics, RNA-Directed DNA Polymerase physiology, Retroelements physiology, Retroviridae Proteins physiology, Transcription, Genetic
- Abstract
We have analysed the reverse transcriptase (RT) activity of the human LINE retrotransposon and that of two retroviruses, using an in vivo assay within mammalian (murine and human) cells. The assay relies on transfection of the cells with expression vectors for the RT of the corresponding elements and PCR analysis of the DNA extracted 2-4 days post-transfection using primers bracketing the intronic domains of co-transfected reporter genes or of cellular genes. This assay revealed high levels of reverse-transcribed cDNA molecules, with the intron spliced out, with expression vectors for the LINE. Generation of cDNA molecules requires LINE ORF2, whereas ORF1 is dispensable. Deletion derivatives within the 3.8 kb LINE ORF2 allowed further delineation of the RT domain: > 0.7 kb at the 5'-end of the LINE ORF2 is dispensable for reverse transcription, consistent with this domain being an endonuclease-like domain, as well as 1 kb at the 3'-end, a putative RNase H domain. Conversely, the RT of the two retroviruses tested, Moloney murine leukemia virus and human immunodeficiency virus, failed to produce similar reverse transcripts. These experiments demonstrate a specific and high efficiency reverse transcription activity for the LINE RT, which applies to RNA with no sequence specificity, including those from cellular genes, and which might therefore be responsible for the endogenous activity that we previously detected within mammalian cells through the formation of pseudogene-like structures.
- Published
- 1997
- Full Text
- View/download PDF
45. X-I and X-II open reading frames of HTLV-I are not required for virus replication or for immortalization of primary T-cells in vitro.
- Author
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Derse D, Mikovits J, and Ruscetti F
- Subjects
- Animals, Cattle, Cells, Cultured, Humans, Open Reading Frames genetics, Gene Expression Regulation, Viral, Genes, pX, Human T-lymphotropic virus 1 physiology, Retroviridae Proteins physiology, T-Lymphocytes virology, Virus Replication
- Abstract
In contrast to other retroviruses of the oncovirinae subgroup, the primate and bovine leukemia viruses (HTLV, STLV, and BLV) encode genes in the X-region of the genome, between the env gene and the 3' long terminal repeat. In HTLV-I, two overlapping open reading frames (ORFs) in the distal half of the X-region encode tax and rex genes, while two ORFs (X-I and X-II) in the proximal half of this region potentially encode proteins designated p12(XI) (or rof) and p30(XII) (or tof). The biological functions and mechanisms of tax and rex have been studied extensively whereas the roles of the other ORFs have not yet been established. To identify possible functions for ORFs X-I and X-II, an infectious molecular clone of HTLV-I and a mutant provirus lacking these ORFs were compared with respect to virus replication, gene expression, and ability to immortalize primary T-cells. When transiently transfected into 293 cells, both intact and deleted proviruses directed the synthesis of virus mRNAs and proteins that were quantitatively and qualitatively identical. These viruses were also indistinguishable in their abilities to infect and replicate in DBS-FRhL cells, which are permissive for HTLV-I propagation. Immortalized T-cell lines were established after cell-free or coculture methods for infection of activated, human peripheral blood or cord blood lymphocytes with each of the cloned viruses. The growth kinetics, cytokine dependence, and cell surface markers of the infected T-cell cultures were similar for each provirus clone. Thus, ORFs X-I and X-II are not essential for virus infectivity, replication, gene expression, or T-cell immortalization in vitro., (Copyright 1997 Academic Press.)
- Published
- 1997
- Full Text
- View/download PDF
46. Controlling elements in replication of the human immunodeficiency virus type 1.
- Author
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Li X, Quan Y, and Wainberg MA
- Subjects
- Fusion Proteins, gag-pol genetics, Fusion Proteins, gag-pol physiology, Gene Products, env genetics, Gene Products, env physiology, Gene Products, gag genetics, Gene Products, gag physiology, Gene Products, rev genetics, Gene Products, rev physiology, Gene Products, tat genetics, Gene Products, tat physiology, HIV-1 genetics, HIV-1 growth & development, Humans, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Transcription, Genetic, Virus Integration, Virus Replication genetics, rev Gene Products, Human Immunodeficiency Virus, tat Gene Products, Human Immunodeficiency Virus, HIV-1 physiology, Virus Replication physiology
- Abstract
We have reviewed the genetic structure of HIV-1 from the perspective of understanding viral and cellular regulatory factors that affect viral replication. Comparisons are drawn, as appropriate, with other human retroviruses, such as HIV-2, in regard to our understanding of pathogenesis. The synthesis of viral protein and the manner in which viral assembly takes place is also discussed.
- Published
- 1997
47. Companies aim at new HIV targets.
- Author
-
Brower V
- Subjects
- Biotechnology, Drug Resistance, Microbial, HIV physiology, HIV Infections drug therapy, Humans, Retroviridae Proteins drug effects, Retroviridae Proteins physiology, Anti-HIV Agents pharmacology, HIV drug effects
- Published
- 1996
- Full Text
- View/download PDF
48. Characterization of the human endogenous retrovirus K proteinase.
- Author
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Schommer S, Sauter M, Kräusslich HG, Best B, and Mueller-Lantzsch N
- Subjects
- Endopeptidase K, Gene Products, gag metabolism, Humans, Molecular Weight, Retroviridae enzymology, Retroviridae Proteins physiology, Serine Endopeptidases physiology
- Abstract
The proteinase of the human endogenous retrovirus K (HERV-K) shows similarity to retrovirus aspartic proteinases. It is translated from a transcript composed of gag and prt. The proteinase was expressed either as full-length native protein or as truncated protein in Escherichia coli. Functional protein was demonstrated by its autocatalytic cleavage into an 18 kDa fragment recognized by a polyclonal antiserum. This autocatalytic cleavage was specifically inhibited by a human immunodeficiency virus type 1 proteinase inhibitor. The HERV-K proteinase expressed in E. coli was capable of cleaving HERV-K Gag translated in vitro. Major protein fragments of 39 and 30 kDa, and minor protein fragments of 26, 22 and 21 kDa were obtained. Similar fragments are also observed in the human teratocarcinoma cell line Tera1. Our data suggest that the HERV-K proteinase is functionally equivalent to other retrovirus proteinases and thus probably functions in the processing of Gag precursor protein.
- Published
- 1996
- Full Text
- View/download PDF
49. Neuronal damage and its relation to dementia in acquired immunodeficiency syndrome (AIDS).
- Author
-
Trillo-Pazos G and Everall IP
- Subjects
- AIDS Dementia Complex physiopathology, Brain physiopathology, Brain virology, Cytokines physiology, HIV pathogenicity, HIV physiology, Humans, Retroviridae Proteins physiology, AIDS Dementia Complex etiology, AIDS Dementia Complex pathology, Neurons pathology
- Abstract
There are an estimated 21.8 million people infected with human immunodeficiency virus (HIV) worldwide [Weekly Epidemiol Rec 1996; 27:204-208] and 90% of these people will have some form of neuropathological abnormality during the course of acquired immunodeficiency syndrome (AIDS). In this review, we will highlight the primary HIV-associated brain disorders. The role of HIV proteins and cytokines on neuronal damage will be assessed. We will also discuss the role of neuronal loss and functional damage in HIV-associated dementia.
- Published
- 1996
- Full Text
- View/download PDF
50. Abundance of an endogenous retroviral envelope protein in placental trophoblasts suggests a biological function.
- Author
-
Venables PJ, Brookes SM, Griffiths D, Weiss RA, and Boyd MT
- Subjects
- Amino Acid Sequence, Base Sequence, Cells, Cultured, DNA Primers, Female, Fluorescent Antibody Technique, Humans, Molecular Sequence Data, Placenta cytology, Placenta virology, Retroviridae Proteins genetics, Retroviridae Proteins physiology, Trophoblasts virology, Viral Envelope Proteins genetics, Viral Envelope Proteins physiology, Placenta metabolism, Retroviridae Proteins biosynthesis, Trophoblasts metabolism, Viral Envelope Proteins biosynthesis
- Abstract
To investigate the hypothesis that the human endogenous sequence ERV-3 has a function, we have cloned and expressed the transmembrane region of its envelope gene and raised specific antibodies to the fusion protein and to a synthetic peptide. These antibodies reacted with a 65-kDa polypeptide which constituted approximately 0.1% of the cellular protein in syncytiotrophoblasts in placenta. The evolutionary conservation and abundant expression of this endogenous retroviral protein in a specific cell type support the concept of a biological function. The similarity of a domain of ERV-3 env to putative immunosuppressive p15E sequences suggests that ERV-3 might form part of the placental immunosuppressive barrier between mother and foetus.
- Published
- 1995
- Full Text
- View/download PDF
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