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AI algorithms have become valuable in aiding professionals in healthcare. The increasing confidence obtained by these models is helpful in critical decision demands. In clinical dermatology, classification models can detect malignant lesions on patients' skin using only RGB images as input. However, most learning-based methods employ data acquired from dermoscopic datasets on training, which are large and validated by a gold standard. Clinical models aim to deal with classification on users' smartphone cameras that do not contain the corresponding resolution provided by dermoscopy. Also, clinical applications bring new challenges. It can contain captures from uncontrolled environments, skin tone variations, viewpoint changes, noises in data and labels, and unbalanced classes. A possible alternative would be to use transfer learning to deal with the clinical images. However, as the number of samples is low, it can cause degradations on the model's performance; the source distribution used in training differs from the test set. This work aims to evaluate the gap between dermoscopic and clinical samples and understand how the dataset variations impact training. It assesses the main differences between distributions that disturb the model's prediction. Finally, from experiments on different architectures, we argue how to combine the data from divergent distributions, decreasing the impact on the model's final accuracy., Comment: 10 pages, 1 figure

The IEEE Very Small Size Soccer (VSSS) is a robot soccer competition in which two teams of three small robots play against each other. Traditionally, a deterministic coach agent will choose the most suitable strategy and formation for each adversary's strategy. Therefore, the role of a coach is of great importance to the game. In this sense, this paper proposes an end-to-end approach for the coaching task based on Reinforcement Learning (RL). The proposed system processes the information during the simulated matches to learn an optimal policy that chooses the current formation, depending on the opponent and game conditions. We trained two RL policies against three different teams (balanced, offensive, and heavily offensive) in a simulated environment. Our results were assessed against one of the top teams of the VSSS league, showing promising results after achieving a win/loss ratio of approximately 2.0., Comment: 6 pages, 9 figures, to be published in Latin American Robotics Symposium

In this paper, we argue that the unsatisfactory out-of-distribution (OOD) detection performance of neural networks is mainly due to the SoftMax loss anisotropy and propensity to produce low entropy probability distributions in disagreement with the principle of maximum entropy. Current out-of-distribution (OOD) detection approaches usually do not directly fix the SoftMax loss drawbacks, but rather build techniques to circumvent it. Unfortunately, those methods usually produce undesired side effects (e.g., classification accuracy drop, additional hyperparameters, slower inferences, and collecting extra data). In the opposite direction, we propose replacing SoftMax loss with a novel loss function that does not suffer from the mentioned weaknesses. The proposed IsoMax loss is isotropic (exclusively distance-based) and provides high entropy posterior probability distributions. Replacing the SoftMax loss by IsoMax loss requires no model or training changes. Additionally, the models trained with IsoMax loss produce as fast and energy-efficient inferences as those trained using SoftMax loss. Moreover, no classification accuracy drop is observed. The proposed method does not rely on outlier/background data, hyperparameter tuning, temperature calibration, feature extraction, metric learning, adversarial training, ensemble procedures, or generative models. Our experiments showed that IsoMax loss works as a seamless SoftMax loss drop-in replacement that significantly improves neural networks' OOD detection performance. Hence, it may be used as a baseline OOD detection approach to be combined with current or future OOD detection techniques to achieve even higher results., Comment: Accepted for publication in the IEEE Transactions on Neural Networks and Learning Systems: Special Issue on Deep Learning for Anomaly Detection

Digital cameras can only capture a limited range of real-world scenes' luminance, producing images with saturated pixels. Existing single image high dynamic range (HDR) reconstruction methods attempt to expand the range of luminance, but are not able to hallucinate plausible textures, producing results with artifacts in the saturated areas. In this paper, we present a novel learning-based approach to reconstruct an HDR image by recovering the saturated pixels of an input LDR image in a visually pleasing way. Previous deep learning-based methods apply the same convolutional filters on well-exposed and saturated pixels, creating ambiguity during training and leading to checkerboard and halo artifacts. To overcome this problem, we propose a feature masking mechanism that reduces the contribution of the features from the saturated areas. Moreover, we adapt the VGG-based perceptual loss function to our application to be able to synthesize visually pleasing textures. Since the number of HDR images for training is limited, we propose to train our system in two stages. Specifically, we first train our system on a large number of images for image inpainting task and then fine-tune it on HDR reconstruction. Since most of the HDR examples contain smooth regions that are simple to reconstruct, we propose a sampling strategy to select challenging training patches during the HDR fine-tuning stage. We demonstrate through experimental results that our approach can reconstruct visually pleasing HDR results, better than the current state of the art on a wide range of scenes., Comment: 10 pages, 13 figures, to be published in ACM SIGGRAPH 2020. For project page see http://faculty.cs.tamu.edu/nimak/Papers/SIGGRAPH2020_HDR/

We propose a deep metric learning model to create embedded sub-spaces with a well defined structure. A new loss function that imposes Gaussian structures on the output space is introduced to create these sub-spaces thus shaping the distribution of the data. Having a mixture of Gaussians solution space is advantageous given its simplified and well established structure. It allows fast discovering of classes within classes and the identification of mean representatives at the centroids of individual classes. We also propose a new semi-supervised method to create sub-classes. We illustrate our methods on the facial expression recognition problem and validate results on the FER+, AffectNet, Extended Cohn-Kanade (CK+), BU-3DFE, and JAFFE datasets. We experimentally demonstrate that the learned embedding can be successfully used for various applications including expression retrieval and emotion recognition.

We propose a new loss formulation to further advance the multiclass segmentation of cluttered cells under weakly supervised conditions. We improve the separation of touching and immediate cells, obtaining sharp segmentation boundaries with high adequacy, when we add Youden's $J$ statistic regularization term to the cross entropy loss. This regularization intrinsically supports class imbalance thus eliminating the necessity of explicitly using weights to balance training. Simulations demonstrate this capability and show how the regularization leads to better results by helping advancing the optimization when cross entropy stalls. We build upon our previous work on multiclass segmentation by adding yet another training class representing gaps between adjacent cells. This addition helps the classifier identify narrow gaps as background and no longer as touching regions. We present results of our methods for 2D and 3D images, from bright field to confocal stacks containing different types of cells, and we show that they accurately segment individual cells after training with a limited number of annotated images, some of which are poorly annotated., Comment: Submitted to ISBI 2020

Multi-Focus Image Fusion seeks to improve the quality of an acquired burst of images with different focus planes. For solving the task, an activity level measurement and a fusion rule are typically established to select and fuse the most relevant information from the sources. However, the design of this kind of method by hand is really hard and sometimes restricted to solution spaces where the optimal all-in-focus images are not contained. Then, we propose here two fast and straightforward approaches for image fusion based on deep neural networks. Our solution uses a multiple source Hourglass architecture trained in an end-to-end fashion. Models are data-driven and can be easily generalized for other kinds of fusion problems. A segmentation approach is used for recognition of the focus map, while the weighted average rule is used for fusion. We designed a training loss function for our regression-based fusion function, which allows the network to learn both the activity level measurement and the fusion rule. Experimental results show our approach has comparable results to the state-of-the-art methods with a 60X increase of computational efficiency for 520X520 resolution images.

We present a weakly supervised deep learning method to perform instance segmentation of cells present in microscopy images. Annotation of biomedical images in the lab can be scarce, incomplete, and inaccurate. This is of concern when supervised learning is used for image analysis as the discriminative power of a learning model might be compromised in these situations. To overcome the curse of poor labeling, our method focuses on three aspects to improve learning: i) we propose a loss function operating in three classes to facilitate separating adjacent cells and to drive the optimizer to properly classify underrepresented regions; ii) a contour-aware weight map model is introduced to strengthen contour detection while improving the network generalization capacity; and iii) we augment data by carefully modulating local intensities on edges shared by adjoining regions and to account for possibly weak signals on these edges. Generated probability maps are segmented using different methods, with the watershed based one generally offering the best solutions, specially in those regions where the prevalence of a single class is not clear. The combination of these contributions allows segmenting individual cells on challenging images. We demonstrate our methods in sparse and crowded cell images, showing improvements in the learning process for a fixed network architecture., Comment: Accepted at MICCAI Worshop 2019

Out-of-distribution (OOD) detection approaches usually present special requirements (e.g., hyperparameter validation, collection of outlier data) and produce side effects (e.g., classification accuracy drop, slower energy-inefficient inferences). We argue that these issues are a consequence of the SoftMax loss anisotropy and disagreement with the maximum entropy principle. Thus, we propose the IsoMax loss and the entropic score. The seamless drop-in replacement of the SoftMax loss by IsoMax loss requires neither additional data collection nor hyperparameter validation. The trained models do not exhibit classification accuracy drop and produce fast energy-efficient inferences. Moreover, our experiments show that training neural networks with IsoMax loss significantly improves their OOD detection performance. The IsoMax loss exhibits state-of-the-art performance under the mentioned conditions (fast energy-efficient inference, no classification accuracy drop, no collection of outlier data, and no hyperparameter validation), which we call the seamless OOD detection task. In future work, current OOD detection methods may replace the SoftMax loss with the IsoMax loss to improve their performance on the commonly studied non-seamless OOD detection problem., Comment: Accepted for publication in The International Joint Conference on Neural Networks (IJCNN), 2021

We present a new end-to-end network architecture for facial expression recognition with an attention model. It focuses attention in the human face and uses a Gaussian space representation for expression recognition. We devise this architecture based on two fundamental complementary components: (1) facial image correction and attention and (2) facial expression representation and classification. The first component uses an encoder-decoder style network and a convolutional feature extractor that are pixel-wise multiplied to obtain a feature attention map. The second component is responsible for obtaining an embedded representation and classification of the facial expression. We propose a loss function that creates a Gaussian structure on the representation space. To demonstrate the proposed method, we create two larger and more comprehensive synthetic datasets using the traditional BU3DFE and CK+ facial datasets. We compared results with the PreActResNet18 baseline. Our experiments on these datasets have shown the superiority of our approach in recognizing facial expressions.

We presented a 2D/3D MV image registration method based on a Convolutional Neural Network. Most of the traditional image registration method intensity-based, which use optimization algorithms to maximize the similarity between to images. Although these methods can achieve good results for kilovoltage images, the same does not occur for megavoltage images due to the lower image quality. Also, these methods most of the times do not present a good capture range. To deal with this problem, we propose the use of Convolutional Neural Network. The experiments were performed using a dataset of 50 brain images. The results showed to be promising compared to traditional image registration methods.

Dynamic classifier selection systems aim to select a group of classifiers that is most adequate for a specific query pattern. This is done by defining a region around the query pattern and analyzing the competence of the classifiers in this region. However, the regions are often surrounded by noise which can difficult the classifier selection. This fact makes the performance of most dynamic selection systems no better than static selections. In this paper, we demonstrate that the performance dynamic selection systems end up limited by the quality of the regions extracted. Thereafter, we propose a new dynamic classifier selection that improves the regions of competence in order to achieve higher recognition rates. obtained from several classification databases show the proposed method not only increase the recognition performance but also decreases the computational cost., Comment: Paper published on IJCNN 2011

We propose a new incremental aggregation algorithm for multi-image deblurring with automatic image selection. The primary motivation is that current bursts deblurring methods do not handle well situations in which misalignment or out-of-context frames are present in the burst. These real-life situations result in poor reconstructions or manual selection of the images that will be used to deblur. Automatically selecting best frames within the burst to improve the base reconstruction is challenging because the amount of possible images fusions is equal to the power set cardinal. Here, we approach the multi-image deblurring problem as a two steps process. First, we successfully learn a comparison function to rank a burst of images using a deep convolutional neural network. Then, an incremental Fourier burst accumulation with a reconstruction degradation mechanism is applied fusing only less blurred images that are sufficient to maximize the reconstruction quality. Experiments with the proposed algorithm have shown superior results when compared to other similar approaches, outperforming other methods described in the literature in previously described situations. We validate our findings on several synthetic and real datasets., Comment: Submitted to IEEE Transactions on Image Processing. 11 pages, 9 figures

ColorCheckers are reference standards that professional photographers and filmmakers use to ensure predictable results under every lighting condition. The objective of this work is to propose a new fast and robust method for automatic ColorChecker detection. The process is divided into two steps: (1) ColorCheckers localization and (2) ColorChecker patches recognition. For the ColorChecker localization, we trained a detection convolutional neural network using synthetic images. The synthetic images are created with the 3D models of the ColorChecker and different background images. The output of the neural networks are the bounding box of each possible ColorChecker candidates in the input image. Each bounding box defines a cropped image which is evaluated by a recognition system, and each image is canonized with regards to color and dimensions. Subsequently, all possible color patches are extracted and grouped with respect to the center's distance. Each group is evaluated as a candidate for a ColorChecker part, and its position in the scene is estimated. Finally, a cost function is applied to evaluate the accuracy of the estimation. The method is tested using real and synthetic images. The proposed method is fast, robust to overlaps and invariant to affine projections. The algorithm also performs well in case of multiple ColorCheckers detection., Comment: Submitted to Image and Vision Computing

Dynamic ensemble selection systems work by estimating the level of competence of each classifier from a pool of classifiers. Only the most competent ones are selected to classify a given test sample. This is achieved by defining a criterion to measure the level of competence of a base classifier, such as, its accuracy in local regions of the feature space around the query instance. However, using only one criterion about the behavior of a base classifier is not sufficient to accurately estimate its level of competence. In this paper, we present a novel dynamic ensemble selection framework using meta-learning. We propose five distinct sets of meta-features, each one corresponding to a different criterion to measure the level of competence of a classifier for the classification of input samples. The meta-features are extracted from the training data and used to train a meta-classifier to predict whether or not a base classifier is competent enough to classify an input instance. During the generalization phase, the meta-features are extracted from the query instance and passed down as input to the meta-classifier. The meta-classifier estimates, whether a base classifier is competent enough to be added to the ensemble. Experiments are conducted over several small sample size classification problems, i.e., problems with a high degree of uncertainty due to the lack of training data. Experimental results show the proposed meta-learning framework greatly improves classification accuracy when compared against current state-of-the-art dynamic ensemble selection techniques., Comment: Article published on Pattern Recognition. arXiv admin note: text overlap with arXiv:1509.00825

We propose a new multiclass weighted loss function for instance segmentation of cluttered cells. We are primarily motivated by the need of developmental biologists to quantify and model the behavior of blood T-cells which might help us in understanding their regulation mechanisms and ultimately help researchers in their quest for developing an effective immuno-therapy cancer treatment. Segmenting individual touching cells in cluttered regions is challenging as the feature distribution on shared borders and cell foreground are similar thus difficulting discriminating pixels into proper classes. We present two novel weight maps applied to the weighted cross entropy loss function which take into account both class imbalance and cell geometry. Binary ground truth training data is augmented so the learning model can handle not only foreground and background but also a third touching class. This framework allows training using U-Net. Experiments with our formulations have shown superior results when compared to other similar schemes, outperforming binary class models with significant improvement of boundary adequacy and instance detection. We validate our results on manually annotated microscope images of T-cells., Comment: Submitted to IEEE ICIP 2018