2,072 results on '"Rebbeck, Timothy"'
Search Results
2. Heterogeneous genetic architectures of prostate cancer susceptibility in sub-Saharan Africa
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Janivara, Rohini, Chen, Wenlong C., Hazra, Ujani, Baichoo, Shakuntala, Agalliu, Ilir, Kachambwa, Paidamoyo, Simonti, Corrine N., Brown, Lyda M., Tambe, Saanika P., Kim, Michelle S., Harlemon, Maxine, Jalloh, Mohamed, Muzondiwa, Dillon, Naidoo, Daphne, Ajayi, Olabode O., Snyper, Nana Yaa, Niang, Lamine, Diop, Halimatou, Ndoye, Medina, Mensah, James E., Abrahams, Afua O. D., Biritwum, Richard, Adjei, Andrew A., Adebiyi, Akindele O., Shittu, Olayiwola, Ogunbiyi, Olufemi, Adebayo, Sikiru, Nwegbu, Maxwell M., Ajibola, Hafees O., Oluwole, Olabode P., Jamda, Mustapha A., Pentz, Audrey, Haiman, Christopher A., Spies, Petrus V., van der Merwe, André, Cook, Michael B., Chanock, Stephen J., Berndt, Sonja I., Watya, Stephen, Lubwama, Alexander, Muchengeti, Mazvita, Doherty, Sean, Smyth, Natalie, Lounsbury, David, Fortier, Brian, Rohan, Thomas E., Jacobson, Judith S., Neugut, Alfred I., Hsing, Ann W., Gusev, Alexander, Aisuodionoe-Shadrach, Oseremen I., Joffe, Maureen, Adusei, Ben, Gueye, Serigne M., Fernandez, Pedro W., McBride, Jo, Andrews, Caroline, Petersen, Lindsay N., Lachance, Joseph, and Rebbeck, Timothy R.
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- 2024
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3. Germline sequence variation in cancer genes in Rwandan breast and prostate cancer cases
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Manirakiza, Achille VC., Baichoo, Shakuntala, Uwineza, Annette, Dukundane, Damas, Uwinkindi, Francois, Ngendahayo, Edouard, Rubagumya, Fidel, Muhawenimana, Emmanuel, Nsabimana, Nicaise, Nzeyimana, Innocent, Maniragaba, Theoneste, Ntirenganya, Faustin, Rurangwa, Ephrem, Mugenzi, Pacifique, Mutamuliza, Janviere, Runanira, Daniel, Niyibizi, Brandon A., Rugengamanzi, Eulade, Besada, Jeffrey, Nielsen, Sarah M., Bucknor, Brianna, Nussbaum, Robert L., Koeller, Diane, Andrews, Caroline, Mutesa, Leon, Fadelu, Temidayo, and Rebbeck, Timothy R.
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- 2024
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4. Publisher Correction: Patient preferences for intervention in the setting of precursor multiple myeloma
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Marinac, Catherine R., Downey, Katelyn, Perry, Jacqueline, Fisher-Longden, Brittany, Rebbeck, Timothy R., Shah, Urvi A., O’Donnell, Elizabeth K., Ghobrial, Irene M., Nadeem, Omar, and Egleston, Brian L.
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- 2024
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5. Patient preferences for intervention in the setting of precursor multiple myeloma
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Marinac, Catherine R., Downey, Katelyn, Perry, Jacqueline, Fisher-Longden, Brittany, Rebbeck, Timothy R., Shah, Urvi A., O’Donnell, Elizabeth K., Ghobrial, Irene M., Nadeem, Omar, and Egleston, Brian L.
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- 2024
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6. Adaptation of the socioecological model to address disparities in engagement of Black men in prostate cancer genetic testing
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Leader, Amy E., Rebbeck, Timothy R., Oh, William K., Patel, Alpa V., Winer, Eric P., Bailey, LeeAnn O., Gomella, Leonard G., Lumpkins, Crystal Y., Garraway, Isla P., Aiello, Lisa B., Baskin, Monica L., Cheng, Heather H., Cooney, Kathleen A., Ganzak, Amanda, George, Daniel J., Halabi, Susan, Hathaway, Feighanne, Healy, Claire, Kim, Joseph W., Leapman, Michael S., Loeb, Stacy, Maxwell, Kara N., McNair, Christopher, Morgan, Todd M., Prindeville, Breanne, Soule, Howard R., Steward, Whitney L., Suttiratana, Sakinah C., Taplin, Mary-Ellen, Yamoah, Kosj, Fortune, Thierry, Bennett, Kris, Blanding-Godbolt, Joshua, Gross, Laura, and Giri, Veda N.
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- 2024
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7. Multiple myeloma incidence and mortality trends in the United States, 1999–2020
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Zhu, David T., Park, Andrew, Lai, Alan, Zhang, Lingxiao, Attar, Hiba, and Rebbeck, Timothy R.
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- 2024
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8. Influence of Neighborhood Social and Natural Environment on Prostate Tumor Histology in a Cohort of Male Health Professionals.
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Iyer, Hari, Vaselkiv, Jane, Stopsack, Konrad, Roscoe, Charlotte, DeVille, Nicole, Zhang, Yiwen, Penney, Kathryn, Balk, Steven, Fiorentino, Michelangelo, Hart, Jaime, De Vivo, Immaculata, Mucci, Lorelei, Laden, Francine, Rebbeck, Timothy, and James, Peter
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atrophy ,inflammation ,neighborhood ,prostate cancer ,prostatic neoplasms ,residence characteristics ,socioeconomic factors ,Humans ,Male ,Environment ,Follow-Up Studies ,Inflammation ,Prostatic Neoplasms ,Residence Characteristics ,Social Class ,Socioeconomic Factors - Abstract
Adverse neighborhood social and natural (green space) environments may contribute to the etiology of prostate cancer (CaP), but mechanisms are unclear. We examined associations between neighborhood environment and prostate intratumoral inflammation in 967 men diagnosed with CaP with available tissue samples from 1986-2009 in the Health Professionals Follow-up Study. Exposures were linked to work or residential addresses in 1988. We estimated indices of neighborhood socioeconomic status (nSES) and segregation (Index of Concentration at the Extremes (ICE)) using US Census tract-level data. Surrounding greenness was estimated using seasonal averaged Normalized Difference Vegetation Index (NDVI) data. Surgical tissue underwent pathological review for acute and chronic inflammation, corpora amylacea, and focal atrophic lesions. Adjusted odds ratios (aORs) for inflammation (ordinal) and focal atrophy (binary) were estimated using logistic regression. No associations were observed for acute or chronic inflammation. Each interquartile-range increase in NDVI within 1,230 m of the participants work or home address (aOR = 0.74, 95% confidence interval (CI): 0.59, 0.93), in ICE-income (aOR = 0.79, 95% CI: 0.61, 1.04), and in ICE-race/income (aOR = 0.79, 95% CI: 0.63, 0.99) was associated with lower odds of postatrophic hyperplasia. Interquartile-range increases in nSES (aOR = 0.76, 95% CI: 0.57, 1.02) and ICE-race/income (aOR = 0.73, 95% CI: 0.54, 0.99) were associated with lower odds of tumor corpora amylacea. Histopathological inflammatory features of prostate tumors may be influenced by neighborhood.
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- 2023
9. Associations between Etiologic or Prognostic Tumor Tissue Markers and Neighborhood Contextual Factors in Male Health Professionals Diagnosed with Prostate Cancer.
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Iyer, Hari, Kensler, Kevin, Vaselkiv, Jane, Stopsack, Konrad, Roscoe, Charlotte, Bandera, Elisa, Qin, Bo, Jang, Thomas, Lotan, Tamara, Hart, Jaime, Mucci, Lorelei, Laden, Francine, Rebbeck, Timothy, and James, Peter
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Humans ,Male ,Prognosis ,Follow-Up Studies ,Prospective Studies ,Transcriptional Regulator ERG ,Trypsin Inhibitor ,Kazal Pancreatic ,Tumor Suppressor Protein p53 ,Prostatic Neoplasms ,Biomarkers ,Tumor ,Residence Characteristics - Abstract
BACKGROUND: There is growing evidence that unfavorable neighborhood contexts may influence prostate cancer progression. Whether these associations may be explained in part by differences in tumor-level somatic alterations remain unclear. METHODS: Data on tumor markers (PTEN, p53, ERG, and SPINK1) were obtained from 1,157 participants with prostate cancer in the Health Professionals Follow-up Study. Neighborhood greenness, socioeconomic status, and the income Index of Concentration at Extremes were obtained from satellite and census data and linked to participants address at diagnosis and at study enrollment. Exposures were scaled to an interquartile range and modeled as tertiles. Bivariate associations between tertiles of neighborhood factors and tumor markers were assessed in covariate adjusted logistic regression models to estimate ORs and 95% confidence intervals. RESULTS: There was no association between any of the neighborhood contextual factors and PTEN, p53, ERG, or SPINK1 in bivariate or multivariable adjusted models. Results were generally consistent when modeling exposure using exposure at diagnosis or at study enrollment. CONCLUSIONS: In this multilevel study of men with prostate cancer, we found no evidence of associations between neighborhood context and tumor tissue markers. IMPACT: Our results provide some of the first empirical data in support of the hypothesis that prostate cancer risk conferred by tumor tissue markers may arise independently of underlying neighborhood context. Prospective studies in more diverse populations are needed to confirm these findings.
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- 2023
10. Prostate-specific antigen testing rates in high-risk populations: results from the All of Us Research Program
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Morley, Faith, Iyer, Hari S., Tamimi, Rulla M., Nanus, David M., Rebbeck, Timothy R., and Kensler, Kevin H.
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- 2024
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11. Associations Between Neighborhood-Level Income and Triple-Negative Breast Cancer in a Majority–Minority Population
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Hernandez, Alexandra E., Westrick, Ashly C., Stoler, Justin, Kesmodel, Susan B., Pinheiro, Paulo S., Figueroa, Maria, Kobetz, Erin N., Rebbeck, Timothy, and Goel, Neha
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- 2024
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12. Characterizing prostate cancer risk through multi-ancestry genome-wide discovery of 187 novel risk variants
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Wang, Anqi, Shen, Jiayi, Rodriguez, Alex A., Saunders, Edward J., Chen, Fei, Janivara, Rohini, Darst, Burcu F., Sheng, Xin, Xu, Yili, Chou, Alisha J., Benlloch, Sara, Dadaev, Tokhir, Brook, Mark N., Plym, Anna, Sahimi, Ali, Hoffman, Thomas J., Takahashi, Atushi, Matsuda, Koichi, Momozawa, Yukihide, Fujita, Masashi, Laisk, Triin, Figuerêdo, Jéssica, Muir, Kenneth, Ito, Shuji, Liu, Xiaoxi, Uchio, Yuji, Kubo, Michiaki, Kamatani, Yoichiro, Lophatananon, Artitaya, Wan, Peggy, Andrews, Caroline, Lori, Adriana, Choudhury, Parichoy P., Schleutker, Johanna, Tammela, Teuvo L. J., Sipeky, Csilla, Auvinen, Anssi, Giles, Graham G., Southey, Melissa C., MacInnis, Robert J., Cybulski, Cezary, Wokolorczyk, Dominika, Lubinski, Jan, Rentsch, Christopher T., Cho, Kelly, Mcmahon, Benjamin H., Neal, David E., Donovan, Jenny L., Hamdy, Freddie C., Martin, Richard M., Nordestgaard, Borge G., Nielsen, Sune F., Weischer, Maren, Bojesen, Stig E., Røder, Andreas, Stroomberg, Hein V., Batra, Jyotsna, Chambers, Suzanne, Horvath, Lisa, Clements, Judith A., Tilly, Wayne, Risbridger, Gail P., Gronberg, Henrik, Aly, Markus, Szulkin, Robert, Eklund, Martin, Nordstrom, Tobias, Pashayan, Nora, Dunning, Alison M., Ghoussaini, Maya, Travis, Ruth C., Key, Tim J., Riboli, Elio, Park, Jong Y., Sellers, Thomas A., Lin, Hui-Yi, Albanes, Demetrius, Weinstein, Stephanie, Cook, Michael B., Mucci, Lorelei A., Giovannucci, Edward, Lindstrom, Sara, Kraft, Peter, Hunter, David J., Penney, Kathryn L., Turman, Constance, Tangen, Catherine M., Goodman, Phyllis J., Thompson, Jr., Ian M., Hamilton, Robert J., Fleshner, Neil E., Finelli, Antonio, Parent, Marie-Élise, Stanford, Janet L., Ostrander, Elaine A., Koutros, Stella, Beane Freeman, Laura E., Stampfer, Meir, Wolk, Alicja, Håkansson, Niclas, Andriole, Gerald L., Hoover, Robert N., Machiela, Mitchell J., Sørensen, Karina Dalsgaard, Borre, Michael, Blot, William J., Zheng, Wei, Yeboah, Edward D., Mensah, James E., Lu, Yong-Jie, Zhang, Hong-Wei, Feng, Ninghan, Mao, Xueying, Wu, Yudong, Zhao, Shan-Chao, Sun, Zan, Thibodeau, Stephen N., McDonnell, Shannon K., Schaid, Daniel J., West, Catharine M. L., Barnett, Gill, Maier, Christiane, Schnoeller, Thomas, Luedeke, Manuel, Kibel, Adam S., Drake, Bettina F., Cussenot, Olivier, Cancel-Tassin, Geraldine, Menegaux, Florence, Truong, Thérèse, Koudou, Yves Akoli, John, Esther M., Grindedal, Eli Marie, Maehle, Lovise, Khaw, Kay-Tee, Ingles, Sue A., Stern, Mariana C., Vega, Ana, Gómez-Caamaño, Antonio, Fachal, Laura, Rosenstein, Barry S., Kerns, Sarah L., Ostrer, Harry, Teixeira, Manuel R., Paulo, Paula, Brandão, Andreia, Watya, Stephen, Lubwama, Alexander, Bensen, Jeannette T., Butler, Ebonee N., Mohler, James L., Taylor, Jack A., Kogevinas, Manolis, Dierssen-Sotos, Trinidad, Castaño-Vinyals, Gemma, Cannon-Albright, Lisa, Teerlink, Craig C., Huff, Chad D., Pilie, Patrick, Yu, Yao, Bohlender, Ryan J., Gu, Jian, Strom, Sara S., Multigner, Luc, Blanchet, Pascal, Brureau, Laurent, Kaneva, Radka, Slavov, Chavdar, Mitev, Vanio, Leach, Robin J., Brenner, Hermann, Chen, Xuechen, Holleczek, Bernd, Schöttker, Ben, Klein, Eric A., Hsing, Ann W., Kittles, Rick A., Murphy, Adam B., Logothetis, Christopher J., Kim, Jeri, Neuhausen, Susan L., Steele, Linda, Ding, Yuan Chun, Isaacs, William B., Nemesure, Barbara, Hennis, Anselm J. M., Carpten, John, Pandha, Hardev, Michael, Agnieszka, De Ruyck, Kim, De Meerleer, Gert, Ost, Piet, Xu, Jianfeng, Razack, Azad, Lim, Jasmine, Teo, Soo-Hwang, Newcomb, Lisa F., Lin, Daniel W., Fowke, Jay H., Neslund-Dudas, Christine M., Rybicki, Benjamin A., Gamulin, Marija, Lessel, Davor, Kulis, Tomislav, Usmani, Nawaid, Abraham, Aswin, Singhal, Sandeep, Parliament, Matthew, Claessens, Frank, Joniau, Steven, Van den Broeck, Thomas, Gago-Dominguez, Manuela, Castelao, Jose Esteban, Martinez, Maria Elena, Larkin, Samantha, Townsend, Paul A., Aukim-Hastie, Claire, Bush, William S., Aldrich, Melinda C., Crawford, Dana C., Srivastava, Shiv, Cullen, Jennifer, Petrovics, Gyorgy, Casey, Graham, Wang, Ying, Tettey, Yao, Lachance, Joseph, Tang, Wei, Biritwum, Richard B., Adjei, Andrew A., Tay, Evelyn, Truelove, Ann, Niwa, Shelley, Yamoah, Kosj, Govindasami, Koveela, Chokkalingam, Anand P., Keaton, Jacob M., Hellwege, Jacklyn N., Clark, Peter E., Jalloh, Mohamed, Gueye, Serigne M., Niang, Lamine, Ogunbiyi, Olufemi, Shittu, Olayiwola, Amodu, Olukemi, Adebiyi, Akindele O., Aisuodionoe-Shadrach, Oseremen I., Ajibola, Hafees O., Jamda, Mustapha A., Oluwole, Olabode P., Nwegbu, Maxwell, Adusei, Ben, Mante, Sunny, Darkwa-Abrahams, Afua, Diop, Halimatou, Gundell, Susan M., Roobol, Monique J., Jenster, Guido, van Schaik, Ron H. N., Hu, Jennifer J., Sanderson, Maureen, Kachuri, Linda, Varma, Rohit, McKean-Cowdin, Roberta, Torres, Mina, Preuss, Michael H., Loos, Ruth J. F., Zawistowski, Matthew, Zöllner, Sebastian, Lu, Zeyun, Van Den Eeden, Stephen K., Easton, Douglas F., Ambs, Stefan, Edwards, Todd L., Mägi, Reedik, Rebbeck, Timothy R., Fritsche, Lars, Chanock, Stephen J., Berndt, Sonja I., Wiklund, Fredrik, Nakagawa, Hidewaki, Witte, John S., Gaziano, J. Michael, Justice, Amy C., Mancuso, Nick, Terao, Chikashi, Eeles, Rosalind A., Kote-Jarai, Zsofia, Madduri, Ravi K., Conti, David V., and Haiman, Christopher A.
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- 2023
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13. Development and Evaluation of Project Management Training for Cancer Research in Sub-Saharan Africa
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Jedy-Agba, Elima, Andrews, Caroline, Odiaka, Emeka, Olukomogbon, Temitope, Irusen, Hayley, Rockson, Isabella, Sorungbe, Temilade, Quarchie, Marjorie, Jalloh, Mohamed, Abimiku, Alashʼle, and Rebbeck, Timothy R.
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- 2024
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14. The role of community outreach and engagement in evaluation of NCI Cancer Center Support Grants
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Alaniz, Maria and Rebbeck, Timothy R.
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- 2024
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15. Cancer Risks Associated With BRCA1 and BRCA2 Pathogenic Variants
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Li, Shuai, Silvestri, Valentina, Leslie, Goska, Rebbeck, Timothy R, Neuhausen, Susan L, Hopper, John L, Nielsen, Henriette Roed, Lee, Andrew, Yang, Xin, McGuffog, Lesley, Parsons, Michael T, Andrulis, Irene L, Arnold, Norbert, Belotti, Muriel, Borg, Åke, Buecher, Bruno, Buys, Saundra S, Caputo, Sandrine M, Chung, Wendy K, Colas, Chrystelle, Colonna, Sarah V, Cook, Jackie, Daly, Mary B, de la Hoya, Miguel, de Pauw, Antoine, Delhomelle, Hélène, Eason, Jacqueline, Engel, Christoph, Evans, D Gareth, Faust, Ulrike, Fehm, Tanja N, Fostira, Florentia, Fountzilas, George, Frone, Megan, Garcia-Barberan, Vanesa, Garre, Pilar, Gauthier-Villars, Marion, Gehrig, Andrea, Glendon, Gord, Goldgar, David E, Golmard, Lisa, Greene, Mark H, Hahnen, Eric, Hamann, Ute, Hanson, Helen, Hassan, Tiara, Hentschel, Julia, Horvath, Judit, Izatt, Louise, Janavicius, Ramunas, Jiao, Yue, John, Esther M, Karlan, Beth Y, Kim, Sung-Won, Konstantopoulou, Irene, Kwong, Ava, Laugé, Anthony, Lee, Jong Won, Lesueur, Fabienne, Mebirouk, Noura, Meindl, Alfons, Mouret-Fourme, Emmanuelle, Musgrave, Hannah, Yie, Joanne Ngeow Yuen, Niederacher, Dieter, Park, Sue K, Pedersen, Inge Sokilde, Ramser, Juliane, Ramus, Susan J, Rantala, Johanna, Rashid, Muhammad U, Reichl, Florian, Ritter, Julia, Rump, Andreas, Santamariña, Marta, Saule, Claire, Schmidt, Gunnar, Schmutzler, Rita K, Senter, Leigha, Shariff, Saba, Singer, Christian F, Southey, Melissa C, Stoppa-Lyonnet, Dominique, Sutter, Christian, Tan, Yen, Teo, Soo Hwang, Terry, Mary Beth, Thomassen, Mads, Tischkowitz, Marc, Toland, Amanda E, Torres, Diana, Vega, Ana, Wagner, Sebastian A, Wang-Gohrke, Shan, Wappenschmidt, Barbara, Weber, Bernhard HF, Yannoukakos, Drakoulis, Spurdle, Amanda B, Easton, Douglas F, and Chenevix-Trench, Georgia
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Prevention ,Breast Cancer ,Pancreatic Cancer ,Rare Diseases ,Ovarian Cancer ,Women's Health ,Digestive Diseases ,Cancer ,Urologic Diseases ,Prostate Cancer ,2.1 Biological and endogenous factors ,BRCA1 Protein ,BRCA2 Protein ,Breast Neoplasms ,Breast Neoplasms ,Male ,Female ,Genetic Predisposition to Disease ,Heterozygote ,Humans ,Infant ,Newborn ,Male ,Mutation ,Ovarian Neoplasms ,Pancreatic Neoplasms ,Risk ,Clinical Sciences ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
PurposeTo provide precise age-specific risk estimates of cancers other than female breast and ovarian cancers associated with pathogenic variants (PVs) in BRCA1 and BRCA2 for effective cancer risk management.MethodsWe used data from 3,184 BRCA1 and 2,157 BRCA2 families in the Consortium of Investigators of Modifiers of BRCA1/2 to estimate age-specific relative (RR) and absolute risks for 22 first primary cancer types adjusting for family ascertainment.ResultsBRCA1 PVs were associated with risks of male breast (RR = 4.30; 95% CI, 1.09 to 16.96), pancreatic (RR = 2.36; 95% CI, 1.51 to 3.68), and stomach (RR = 2.17; 95% CI, 1.25 to 3.77) cancers. Associations with colorectal and gallbladder cancers were also suggested. BRCA2 PVs were associated with risks of male breast (RR = 44.0; 95% CI, 21.3 to 90.9), stomach (RR = 3.69; 95% CI, 2.40 to 5.67), pancreatic (RR = 3.34; 95% CI, 2.21 to 5.06), and prostate (RR = 2.22; 95% CI, 1.63 to 3.03) cancers. The stomach cancer RR was higher for females than males (6.89 v 2.76; P = .04). The absolute risks to age 80 years ranged from 0.4% for male breast cancer to approximately 2.5% for pancreatic cancer for BRCA1 carriers and from approximately 2.5% for pancreatic cancer to 27% for prostate cancer for BRCA2 carriers.ConclusionIn addition to female breast and ovarian cancers, BRCA1 and BRCA2 PVs are associated with increased risks of male breast, pancreatic, stomach, and prostate (only BRCA2 PVs) cancers, but not with the risks of other previously suggested cancers. The estimated age-specific risks will refine cancer risk management in men and women with BRCA1/2 PVs.
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- 2022
16. Impact of neighborhood socioeconomic status, income segregation, and greenness on blood biomarkers of inflammation.
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Iyer, Hari, Hart, Jaime, James, Peter, Elliott, Elise, DeVille, Nicole, Holmes, Michelle, De Vivo, Immaculata, Mucci, Lorelei, Laden, Francine, and Rebbeck, Timothy
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Biomarkers ,Disparities ,Health behavior ,Inflammation ,Residence characteristics ,Socioeconomic factors ,Biomarkers ,Female ,Humans ,Inflammation ,Male ,Prospective Studies ,Residence Characteristics ,Social Class ,Socioeconomic Factors - Abstract
BACKGROUND: Neighborhood deprivation is linked with inflammation, which may explain poorer health across populations. Behavioral risk factors are assumed to largely mediate these relationships, but few studies have examined this. We examined three neighborhood contextual factors that could exert direct effects on inflammation: (1) neighborhood socioeconomic status, (2) an index of concentration at extremes (that measures segregation), and (3) surrounding vegetation (greenness). METHODS: Using blood samples and addresses collected from prospective cohorts of 7,930 male (1990-1994) and 16,183 female (1986-1990) health professionals with at least one inflammatory marker, we prospectively linked neighborhood contextual factors to inflammatory biomarkers (adiponectin, C-reactive protein, interleukin-6, soluble tumor necrosis factor receptor-2). Log-transformed, z-scaled component measures were used to calculate an inflammation score. Neighborhood socioeconomic status and index of concentration of extremes were obtained from the 1990 decennial census and linked to participant addresses. Surrounding greenness was assessed from satellite data and focal statistics were applied to generate exposures within 270 m and 1230 m of the participants address. We fit multiple linear regression models adjusting for demographic, clinical, and behavioral risk factors. RESULTS: Higher neighborhood socioeconomic status was associated with lower inflammation score in women (β for interquartile range increase = -27.7%, 95% CI: -34.9%, -19.8%) and men (β = -21.2%, 95% CI: -31.0%, -10.1%). Similarly, participants in neighborhoods with higher concentrations of high-income households were associated with lower inflammation score in women (β = -27.8%, 95% CI: -35.8%, -18.7%) and men (β = -16.4%, 95% CI: -29.7%, -0.56%). Surrounding greenness within 270 m of each participants address was associated with lower inflammation score in women (β = -18.9%, 95% CI: -28.9%, -7.4%) but not men. Results were robust to sensitivity analyses to assess unmeasured confounding and selection bias. DISCUSSION: Our findings support the hypothesis that adverse neighborhood environments may contribute to inflammation through pathways independent of behavioral risk factors, including psychosocial stress and toxic environments.
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- 2022
17. Multinational, Multicenter Evaluation of Prostate Cancer Tissue in Sub-Saharan Africa: Challenges and Opportunities
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van Wyk, Abraham C., Lal, Priti, Ogunbiyi, J. Olufemi, Kyokunda, Lynnette, Hobenu, Fred, Dial, Cherif, Jalloh, Mohamed, Gyasi, Richard, Oluwole, Olabode P., Abrahams, Afua D., Botha, Adam R., Mtshali, Nompumelelo Zamokuhle, Andrews, Caroline, Mante, Sunny, Adusei, Ben, Gueye, Serigne M., Mensah, James E., Adjei, Andrew Anthony, Tettey, Yao, Adebiyi, Akin, Aisuodionoe-Shadrach, Oseremen, Eniola, Sefiu Bolarinwa, Serna, Amparo, Yamoah, Kosj, Chen, Wenlong Carl, Fernandez, Pedro, Robinson, Brian D., Mosquera, Juan Miguel, Hsing, Ann W., Agalliu, Ilir, and Rebbeck, Timothy R.
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- 2024
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18. Mass spectrometry-detected MGUS is associated with obesity and other novel modifiable risk factors in a high-risk population
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Lee, David J., El-Khoury, Habib, Tramontano, Angela C., Alberge, Jean-Baptiste, Perry, Jacqueline, Davis, Maya I., Horowitz, Erica, Redd, Robert, Sakrikar, Dhananjay, Barnidge, David, Perkins, Mark C., Harding, Stephen, Mucci, Lorelei, Rebbeck, Timothy R., Ghobrial, Irene M., and Marinac, Catherine R.
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- 2024
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19. Understanding inequities in precision oncology diagnostics
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Dutta, Ritika, Vallurupalli, Mounica, McVeigh, Quinn, Huang, Franklin W., and Rebbeck, Timothy R.
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- 2023
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20. Comparison of community pathologists with expert dermatopathologists evaluating Breslow thickness and histopathologic subtype in a large international population-based study of melanoma
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Yardman-Frank, Joseph Michael, Bronner, Baillie, Rosso, Stefano, From, Lynn, Busam, Klaus, Groben, Pam, Tucker, Paul, Cust, Anne, Armstrong, Bruce, Kricker, Anne, Marrett, Loraine, Anton-Culver, Hoda, Gruber, Stephen, Gallagher, Rick, Zanetti, Roberto, Sacchetto, Lidia, Dwyer, Terry, Venn, Alison, Orlow, Irene, Kanetsky, Peter, Luo, Li, Thomas, Nancy, Begg, Colin, Berwick, Marianne, Team, GEM Study, Busam, Klaus J, Autuori, Isidora, Roy, Pampa, Reiner, Anne, Boyce, Tawny W, Cust, Anne E, Armstrong, Bruce K, Dwyer, Terence, Gallagher, Richard P, Marrett, Loraine D, Gruber, Stephen B, Bonner, Joseph D, Thomas, Nancy E, Conway, Kathleen, Ollila, David W, Groben, Pamela A, Edmiston, Sharon N, Hao, Honglin, Parrish, Eloise, Frank, Jill S, Gibbs, David C, Rebbeck, Timothy R, Kanetsky, Peter A, Taylor, Julia Lee, and Madronich, Sasha
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Data Management and Data Science ,Information and Computing Sciences ,Biomedical and Clinical Sciences ,GEM Study Team - Published
- 2021
21. Computationally Derived Cribriform Area Index from Prostate Cancer Hematoxylin and Eosin Images Is Associated with Biochemical Recurrence Following Radical Prostatectomy and Is Most Prognostic in Gleason Grade Group 2
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Leo, Patrick, Chandramouli, Sacheth, Farré, Xavier, Elliott, Robin, Janowczyk, Andrew, Bera, Kaustav, Fu, Pingfu, Janaki, Nafiseh, El-Fahmawi, Ayah, Shahait, Mohammed, Kim, Jessica, Lee, David, Yamoah, Kosj, Rebbeck, Timothy R, Khani, Francesca, Robinson, Brian D, Shih, Natalie NC, Feldman, Michael, Gupta, Sanjay, McKenney, Jesse, Lal, Priti, and Madabhushi, Anant
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Clinical Research ,Bioengineering ,Prostate Cancer ,Cancer ,Patient Safety ,Urologic Diseases ,Eosine Yellowish-(YS) ,Hematoxylin ,Humans ,Male ,Neoplasm Recurrence ,Local ,Prognosis ,Prostate ,Prostatectomy ,Prostatic Neoplasms ,Biochemical recurrence ,Cribriform ,Digital pathology ,Gleason grading ,Machine learning ,Prostate cancer ,Clinical Sciences - Abstract
BackgroundThe presence of invasive cribriform adenocarcinoma (ICC), an expanse of cells containing punched-out lumina uninterrupted by stroma, in radical prostatectomy (RP) specimens has been associated with biochemical recurrence (BCR). However, ICC identification has only moderate inter-reviewer agreement.ObjectiveTo investigate quantitative machine-based assessment of the extent and prognostic utility of ICC, especially within individual Gleason grade groups.Design, setting, and participantsA machine learning approach was developed for ICC segmentation using 70 RP patients and validated in a cohort of 749 patients from four sites whose median year of surgery was 2007 and with median follow-up of 28 mo. ICC was segmented on one representative hematoxylin and eosin RP slide per patient and the fraction of tumor area composed of ICC, the cribriform area index (CAI), was measured.Outcome measurements and statistical analysisThe association between CAI and BCR was measured in terms of the concordance index (c index) and hazard ratio (HR).Results and limitationsCAI was correlated with BCR (c index 0.62) in the validation set of 411 patients with ICC morphology, especially those with Gleason grade group 2 cancer (n = 192; c index 0.66), and was less prognostic when patients without ICC were included (c index 0.54). A doubling of CAI in the group with ICC morphology was prognostic after controlling for Gleason grade, surgical margin positivity, preoperative prostate-specific antigen level, pathological T stage, and age (HR 1.19, 95% confidence interval 1.03-1.38; p = 0.018).ConclusionsAutomated image analysis and machine learning could provide an objective, quantitative, reproducible, and high-throughput method of quantifying ICC area. The performance of CAI for grade group 2 cancer suggests that for patients with little Gleason 4 pattern, the ICC fraction has a strong prognostic role.Patient summaryMachine-based measurement of a specific cell pattern (cribriform; sieve-like, with lots of spaces) in images of prostate specimens could improve risk stratification for patients with prostate cancer. In the future, this could help in expanding the criteria for active surveillance.
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- 2021
22. Computer extracted gland features from H&E predicts prostate cancer recurrence comparably to a genomic companion diagnostic test: a large multi-site study.
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Leo, Patrick, Janowczyk, Andrew, Elliott, Robin, Janaki, Nafiseh, Bera, Kaustav, Shiradkar, Rakesh, Farré, Xavier, Fu, Pingfu, El-Fahmawi, Ayah, Shahait, Mohammed, Kim, Jessica, Lee, David, Yamoah, Kosj, Rebbeck, Timothy R, Khani, Francesca, Robinson, Brian D, Eklund, Lauri, Jambor, Ivan, Merisaari, Harri, Ettala, Otto, Taimen, Pekka, Aronen, Hannu J, Boström, Peter J, Tewari, Ashutosh, Magi-Galluzzi, Cristina, Klein, Eric, Purysko, Andrei, Nc Shih, Natalie, Feldman, Michael, Gupta, Sanjay, Lal, Priti, and Madabhushi, Anant
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Existing tools for post-radical prostatectomy (RP) prostate cancer biochemical recurrence (BCR) prognosis rely on human pathologist-derived parameters such as tumor grade, with the resulting inter-reviewer variability. Genomic companion diagnostic tests such as Decipher tend to be tissue destructive, expensive, and not routinely available in most centers. We present a tissue non-destructive method for automated BCR prognosis, termed "Histotyping", that employs computational image analysis of morphologic patterns of prostate tissue from a single, routinely acquired hematoxylin and eosin slide. Patients from two institutions (n = 214) were used to train Histotyping for identifying high-risk patients based on six features of glandular morphology extracted from RP specimens. Histotyping was validated for post-RP BCR prognosis on a separate set of n = 675 patients from five institutions and compared against Decipher on n = 167 patients. Histotyping was prognostic of BCR in the validation set (p
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- 2021
23. Neighborhood greenness and burden of non-communicable diseases in Sub-Saharan Africa: A multi-country cross-sectional study.
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Iyer, Hari, James, Peter, Valeri, Linda, Bajunirwe, Francis, Nankya-Mutyoba, Joan, Njelekela, Marina, Chiwanga, Faraja, Sewram, Vikash, Ajayi, IkeOluwapo, Adebamowo, Clement, Dalal, Shona, Reid, Todd, Rebbeck, Timothy, Adami, Hans-Olov, and Holmes, Michelle
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Environmental epidemiology ,Greenness ,Non-communicable diseases ,Obesity ,Sub-saharan Africa ,Vegetation ,Africa South of the Sahara ,Cross-Sectional Studies ,Humans ,Noncommunicable Diseases ,Overweight ,Risk Factors - Abstract
Population growth, demographic transitions and urbanization in sub-Saharan Africa (SSA) will increase non-communicable disease (NCD) burden. We studied the association between neighborhood greenness and NCDs in a multi-country cross-sectional study. Among 1178 participants, in adjusted models, a 0.11 unit NDVI increase was associated with lower BMI (β: -1.01, 95% CI: -1.35, -0.67), and lower odds of overweight/obesity (aOR: 0.73, 95% CI: 0.62, 0.85), diabetes (aOR: 0.77, 95% CI: 0.62, 0.96), and having ≥3 allostatic load components compared to none (aOR: 0.66, 95% CI: 0.52, 0.85). Except for diabetes, these remained statistically significant after Bonferroni correction. We observed no association between NDVI and hypertension or cholesterol. Our findings are consistent with health benefits of neighborhood greenness reported in other countries, suggesting greening strategies could be considered as part of broader public health interventions for NCDs.
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- 2021
24. Risk factors for endometrial cancer in Black women
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Sponholtz, Todd R., Palmer, Julie R., Rosenberg, Lynn, Chen, Chu, Chen, Yu, Clarke, Megan A., Clendenen, Tess, Du, Mengmeng, Johnson, Lisa, Liao, Linda M., Michels, Kara A., O’Connell, Kelli, Olson, Sara H., Petruzella, Stacey, Rebbeck, Timothy R., Setiawan, Veronica Wendy, Trabert, Britton, Weiss, Noel S., Wentzensen, Nicholas, Wilkens, Lynne, and Wise, Lauren A.
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- 2023
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25. ASO Visual Abstract: Associations Between Neighborhood-Level Income and Triple-Negative Breast Cancer in a Majority–Minority Population
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Hernandez, Alexandra E., Westrick, Ashly C., Stoler, Justin, Kesmodel, Susan B., Pinheiro, Paulo S., Figueroa, Maria E., Kobetz, Erin N., Rebbeck, Timothy, and Goel, Neha
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- 2024
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26. Translational Epidemiology: Genetic Ancestry in Breast Cancer: What Is the Role of Genetic Ancestry and Socioeconomic Status in Triple-Negative Breast Cancer?
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Goel, Neha, Hernandez, Alexandra, Merchant, Nipun, and Rebbeck, Timothy
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- 2023
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27. Implementation of Germline Testing for Prostate Cancer: Philadelphia Prostate Cancer Consensus Conference 2019.
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Giri, Veda N, Knudsen, Karen E, Kelly, William K, Cheng, Heather H, Cooney, Kathleen A, Cookson, Michael S, Dahut, William, Weissman, Scott, Soule, Howard R, Petrylak, Daniel P, Dicker, Adam P, AlDubayan, Saud H, Toland, Amanda E, Pritchard, Colin C, Pettaway, Curtis A, Daly, Mary B, Mohler, James L, Parsons, J Kellogg, Carroll, Peter R, Pilarski, Robert, Blanco, Amie, Woodson, Ashley, Rahm, Alanna, Taplin, Mary-Ellen, Polascik, Thomas J, Helfand, Brian T, Hyatt, Colette, Morgans, Alicia K, Feng, Felix, Mullane, Michael, Powers, Jacqueline, Concepcion, Raoul, Lin, Daniel W, Wender, Richard, Mark, James Ryan, Costello, Anthony, Burnett, Arthur L, Sartor, Oliver, Isaacs, William B, Xu, Jianfeng, Weitzel, Jeffrey, Andriole, Gerald L, Beltran, Himisha, Briganti, Alberto, Byrne, Lindsey, Calvaresi, Anne, Chandrasekar, Thenappan, Chen, David YT, Den, Robert B, Dobi, Albert, Crawford, E David, Eastham, James, Eggener, Scott, Freedman, Matthew L, Garnick, Marc, Gomella, Patrick T, Handley, Nathan, Hurwitz, Mark D, Izes, Joseph, Karnes, R Jeffrey, Lallas, Costas, Languino, Lucia, Loeb, Stacy, Lopez, Ana Maria, Loughlin, Kevin R, Lu-Yao, Grace, Malkowicz, S Bruce, Mann, Mark, Mille, Patrick, Miner, Martin M, Morgan, Todd, Moreno, Jose, Mucci, Lorelei, Myers, Ronald E, Nielsen, Sarah M, O'Neil, Brock, Pinover, Wayne, Pinto, Peter, Poage, Wendy, Raj, Ganesh V, Rebbeck, Timothy R, Ryan, Charles, Sandler, Howard, Schiewer, Matthew, Scott, E Michael D, Szymaniak, Brittany, Tester, William, Trabulsi, Edouard J, Vapiwala, Neha, Yu, Evan Y, Zeigler-Johnson, Charnita, and Gomella, Leonard G
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Clinical Research ,Genetic Testing ,Cancer ,Health Services ,Urologic Diseases ,Prostate Cancer ,Aging ,Genetics ,Good Health and Well Being ,Germ-Line Mutation ,History ,20th Century ,Humans ,Male ,Prostatic Neoplasms ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
PurposeGermline testing (GT) is a central feature of prostate cancer (PCA) treatment, management, and hereditary cancer assessment. Critical needs include optimized multigene testing strategies that incorporate evolving genetic data, consistency in GT indications and management, and alternate genetic evaluation models that address the rising demand for genetic services.MethodsA multidisciplinary consensus conference that included experts, stakeholders, and national organization leaders was convened in response to current practice challenges and to develop a genetic implementation framework. Evidence review informed questions using the modified Delphi model. The final framework included criteria with strong (> 75%) agreement (Recommend) or moderate (50% to 74%) agreement (Consider).ResultsLarge germline panels and somatic testing were recommended for metastatic PCA. Reflex testing-initial testing of priority genes followed by expanded testing-was suggested for multiple scenarios. Metastatic disease or family history suggestive of hereditary PCA was recommended for GT. Additional family history and pathologic criteria garnered moderate consensus. Priority genes to test for metastatic disease treatment included BRCA2, BRCA1, and mismatch repair genes, with broader testing, such as ATM, for clinical trial eligibility. BRCA2 was recommended for active surveillance discussions. Screening starting at age 40 years or 10 years before the youngest PCA diagnosis in a family was recommended for BRCA2 carriers, with consideration in HOXB13, BRCA1, ATM, and mismatch repair carriers. Collaborative (point-of-care) evaluation models between health care and genetic providers was endorsed to address the genetic counseling shortage. The genetic evaluation framework included optimal pretest informed consent, post-test discussion, cascade testing, and technology-based approaches.ConclusionThis multidisciplinary, consensus-driven PCA genetic implementation framework provides novel guidance to clinicians and patients tailored to the precision era. Multiple research, education, and policy needs remain of importance.
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- 2020
28. The association between neighborhood greenness and incidence of lethal prostate cancer: A prospective cohort study.
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Iyer, Hari, James, Peter, Valeri, Linda, Hart, Jaime, Pernar, Claire, Mucci, Lorelei, Holmes, Michelle, Laden, Francine, and Rebbeck, Timothy
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Built environment ,Causal mediation ,Cohort studies ,Green space ,Physical activity ,Prostate cancer - Abstract
BACKGROUND: Growing evidence suggests that neighborhood contextual environment could influence risk factors and, therefore, incidence of lethal prostate cancer. We studied the association between neighborhood greenness and lethal prostate cancer incidence and assessed mediation by vigorous physical activity. METHODS: A total of 47,958 participants were followed in the Health Professionals Follow-up Study from 1986 to 2014. Neighborhood greenness exposure was estimated using normalized difference vegetation index (NDVI) with 1 km resolution, assigned to home or work addresses at start of follow-up. Adjusted hazard ratios (aHRs) and 95% confidence intervals (CIs) were estimated using sequentially adjusted Cox models with individual and contextual prostate cancer risk factors as covariates. Analyses were compared among those whose addresses were constant over follow-up and stratified by population density and address type. RESULTS: We observed 898 cases over 1,054,743 person-years. An interquartile range increase in NDVI was associated with 5% lower rate of lethal prostate cancer (aHR = 0.95, 95% CI = 0.88, 1.03), with stronger associations in nonmovers (aHR = 0.92, 95% CI = 0.85, 1.01). Inverse associations were observed among men in high (aHR = 0.90, 95% CI = 0.82, 0.99) but not low (aHR = 1.11, 95% CI = 0.95, 1.29, P het = 0.086) population density areas, and those reporting from work (aHR = 0.87, 95% CI = 0.75, 1.01) but not home (aHR = 1.04, 95% CI = 0.91, 1.17, P het = 0.10) addresses. There was no evidence of mediation by vigorous physical activity. CONCLUSION: We report inverse associations between neighborhood greenness and lethal prostate cancer when restricting to nonmovers and in high population density areas. Replication could confirm findings and clarify mechanisms.
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- 2020
29. The contribution of residential greenness to mortality among men with prostate cancer: a registry-based cohort study of Black and White men.
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Iyer, Hari, Valeri, Linda, James, Peter, Chen, Jarvis, Hart, Jaime, Laden, Francine, Holmes, Michelle, and Rebbeck, Timothy
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Environmental epidemiology ,Greenness ,Mediation analysis ,Prostate cancer ,Racial disparities ,Vegetation - Abstract
BACKGROUND: Black men with prostate cancer (CaP) experience excess mortality compared with White men. Residential greenness, a health promoting contextual factor, could explain racial disparities in mortality among men with CaP. METHODS: We identified Pennsylvania Cancer Registry cases diagnosed between January 2000 and December 2015. Totally, 128,568 participants were followed until death or 1 January 2018, whichever occurred first. Residential exposure at diagnosis was characterized using the Normalized Difference Vegetation Index (NDVI) with 250 m resolution. We estimated hazard ratios (HRs) using Cox models, adjusting for area-level socioeconomic status, geographic healthcare access, and segregation. To determine whether increasing residential greenness could reduce racial disparities, we compared standardized 10-year mortality Black-White risk differences under a hypothetical intervention fixing NDVI to the 75th percentile of NDVI experienced by White men. RESULTS: We observed 29,978 deaths over 916,590 person-years. Comparing men in the highest to lowest NDVI quintile, all-cause (adjusted HR [aHR]: 0.88, 95% confidence interval [CI]: 0.84, 0.92, P trend < 0.0001), prostate-specific (aHR: 0.88, 95% CI: 0.80, 0.99, P trend= 0.0021), and cardiovascular-specific (aHR: 0.82, 95% CI: 0.74, 0.90, P trend < 0.0001) mortality were lower. Inverse associations between an interquartile range increase in NDVI and cardiovascular-specific mortality were observed in White (aHR: 0.90, 95% CI: 0.86, 0.93) but not Black men (aHR: 0.97, 95% CI: 0.89, 1.06; P het = 0.067). Hypothetical interventions to increase NDVI led to nonsignificant reductions in all-cause (-5.3%) and prostate-specific (-23.2%), but not cardiovascular-specific mortality disparities (+50.5%). DISCUSSION: Residential greenness was associated with lower mortality among men with CaP, but findings suggest that increasing residential greenness would have limited impact on racial disparities in mortality.
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- 2020
30. Evidence of Novel Susceptibility Variants for Prostate Cancer and a Multiancestry Polygenic Risk Score Associated with Aggressive Disease in Men of African Ancestry
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Chen, Fei, Madduri, Ravi K., Rodriguez, Alex A., Darst, Burcu F., Chou, Alisha, Sheng, Xin, Wang, Anqi, Shen, Jiayi, Saunders, Edward J., Rhie, Suhn K., Bensen, Jeannette T., Ingles, Sue A., Kittles, Rick A., Strom, Sara S., Rybicki, Benjamin A., Nemesure, Barbara, Isaacs, William B., Stanford, Janet L., Zheng, Wei, Sanderson, Maureen, John, Esther M., Park, Jong Y., Xu, Jianfeng, Wang, Ying, Berndt, Sonja I., Huff, Chad D., Yeboah, Edward D., Tettey, Yao, Lachance, Joseph, Tang, Wei, Rentsch, Christopher T., Cho, Kelly, Mcmahon, Benjamin H., Biritwum, Richard B., Adjei, Andrew A., Tay, Evelyn, Truelove, Ann, Niwa, Shelley, Sellers, Thomas A., Yamoah, Kosj, Murphy, Adam B., Crawford, Dana C., Patel, Alpa V., Bush, William S., Aldrich, Melinda C., Cussenot, Olivier, Petrovics, Gyorgy, Cullen, Jennifer, Neslund-Dudas, Christine M., Stern, Mariana C., Kote-Jarai, Zsofia, Govindasami, Koveela, Cook, Michael B., Chokkalingam, Anand P., Hsing, Ann W., Goodman, Phyllis J., Hoffmann, Thomas J., Drake, Bettina F., Hu, Jennifer J., Keaton, Jacob M., Hellwege, Jacklyn N., Clark, Peter E., Jalloh, Mohamed, Gueye, Serigne M., Niang, Lamine, Ogunbiyi, Olufemi, Idowu, Michael O., Popoola, Olufemi, Adebiyi, Akindele O., Aisuodionoe-Shadrach, Oseremen I., Ajibola, Hafees O., Jamda, Mustapha A., Oluwole, Olabode P., Nwegbu, Maxwell, Adusei, Ben, Mante, Sunny, Darkwa-Abrahams, Afua, Mensah, James E., Diop, Halimatou, Van Den Eeden, Stephen K., Blanchet, Pascal, Fowke, Jay H., Casey, Graham, Hennis, Anselm J., Lubwama, Alexander, Thompson, Ian M., Jr., Leach, Robin, Easton, Douglas F., Preuss, Michael H., Loos, Ruth J., Gundell, Susan M., Wan, Peggy, Mohler, James L., Fontham, Elizabeth T., Smith, Gary J., Taylor, Jack A., Srivastava, Shiv, Eeles, Rosaline A., Carpten, John D., Kibel, Adam S., Multigner, Luc, Parent, Marie-Élise, Menegaux, Florence, Cancel-Tassin, Geraldine, Klein, Eric A., Andrews, Caroline, Rebbeck, Timothy R., Brureau, Laurent, Ambs, Stefan, Edwards, Todd L., Watya, Stephen, Chanock, Stephen J., Witte, John S., Blot, William J., Michael Gaziano, J., Justice, Amy C., Conti, David V., and Haiman, Christopher A.
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- 2023
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31. Is early-onset cancer an emerging global epidemic? Current evidence and future implications
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Ugai, Tomotaka, Sasamoto, Naoko, Lee, Hwa-Young, Ando, Mariko, Song, Mingyang, Tamimi, Rulla M., Kawachi, Ichiro, Campbell, Peter T., Giovannucci, Edward L., Weiderpass, Elisabete, Rebbeck, Timothy R., and Ogino, Shuji
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- 2022
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32. Substantial Gleason reclassification in Black men with national comprehensive cancer network low-risk prostate cancer – A propensity score analysis
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Awasthi, Shivanshu, Mahal, Brandon A., Park, Jong Y., Creed, Jordan H., Williams, Vonetta L., Elkenawi, Asmaa, Meadows, Sylvester O., Pow-Sang, Julio M., Lu-Yao, Grace, Kelly, Wm. Kevin, Lang, Damaris-Lois Y., Zgibor, Janice, Rebbeck, Timothy R., and Yamoah, Kosj
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- 2022
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33. BRCA1 and BRCA2 pathogenic sequence variants in women of African origin or ancestry
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Friebel, Tara M, Andrulis, Irene L, Balmaña, Judith, Blanco, Amie M, Couch, Fergus J, Daly, Mary B, Domchek, Susan M, Easton, Douglas F, Foulkes, William D, Ganz, Patricia A, Garber, Judy, Glendon, Gord, Greene, Mark H, Hulick, Peter J, Isaacs, Claudine, Jankowitz, Rachel C, Karlan, Beth Y, Kirk, Judy, Kwong, Ava, Lee, Annette, Lesueur, Fabienne, Lu, Karen H, Nathanson, Katherine L, Neuhausen, Susan L, Offit, Kenneth, Palmero, Edenir I, Sharma, Priyanka, Tischkowitz, Marc, Toland, Amanda E, Tung, Nadine, van Rensburg, Elizabeth J, Vega, Ana, Weitzel, Jeffrey N, Collaborators, GEMO Study, Hoskins, Kent F, Maga, Tara, Parsons, Michael T, McGuffog, Lesley, Antoniou, Antonis C, Chenevix‐Trench, Georgia, Huo, Dezheng, Olopade, Olufunmilayo I, and Rebbeck, Timothy R
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Biological Sciences ,Biomedical and Clinical Sciences ,Genetics ,Women's Health ,Breast Cancer ,Health Disparities ,Minority Health ,Cancer ,2.6 Resources and infrastructure (aetiology) ,Alleles ,BRCA1 Protein ,BRCA2 Protein ,Black People ,Female ,Genetic Association Studies ,Genetic Predisposition to Disease ,Genetic Variation ,Humans ,Mutation ,Population Surveillance ,African ancestry ,BRCA1 ,BRCA2 ,mutation ,pathogenic sequence variant ,Clinical Sciences ,Genetics & Heredity ,Clinical sciences - Abstract
BRCA1 and BRCA2 (BRCA1/2) pathogenic sequence variants (PSVs) confer elevated risks of multiple cancers. However, most BRCA1/2 PSVs reports focus on European ancestry individuals. Knowledge of the PSV distribution in African descent individuals is poorly understood. We undertook a systematic review of the published literature and publicly available databases reporting BRCA1/2 PSVs also accessed the Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA) database to identify African or African descent individuals. Using these data, we inferred which of the BRCA PSVs were likely to be of African continental origin. Of the 43,817 BRCA1/2 PSV carriers in the CIMBA database, 469 (1%) were of African descent. Additional African descent individuals were identified in public databases (n = 291) and the literature (n = 601). We identified 164 unique BRCA1 and 173 unique BRCA2 PSVs in individuals of African ancestry. Of these, 83 BRCA1 and 91 BRCA2 PSVs are of likely or possible African origin. We observed numerous differences in the distribution of PSV type and function in African origin versus non-African origin PSVs. Research in populations of African ancestry with BRCA1/2 PSVs is needed to provide the information needed for clinical management and decision-making in African descent individuals worldwide.
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- 2019
34. Novel RB1-Loss Transcriptomic Signature Is Associated with Poor Clinical Outcomes across Cancer Types
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Chen, William S, Alshalalfa, Mohammed, Zhao, Shuang G, Liu, Yang, Mahal, Brandon A, Quigley, David A, Wei, Ting, Davicioni, Elai, Rebbeck, Timothy R, Kantoff, Philip W, Maher, Christopher A, Knudsen, Karen E, Small, Eric J, Nguyen, Paul L, and Feng, Felix Y
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Rare Diseases ,Genetics ,Human Genome ,Clinical Research ,Cancer ,Good Health and Well Being ,Biomarkers ,Tumor ,Disease Progression ,Humans ,Male ,Neoplasms ,Prognosis ,Transcriptome ,Oncology and Carcinogenesis ,Oncology & Carcinogenesis - Abstract
PurposeRb-pathway disruption is of great clinical interest, as it has been shown to predict outcomes in multiple cancers. We sought to develop a transcriptomic signature for detecting biallelic RB1 loss (RBS) that could be used to assess the clinical implications of RB1 loss on a pan-cancer scale.Experimental designWe utilized data from the Cancer Cell Line Encyclopedia (N = 995) to develop the first pan-cancer transcriptomic signature for predicting biallelic RB1 loss (RBS). Model accuracy was validated using The Cancer Genome Atlas (TCGA) Pan-Cancer dataset (N = 11,007). RBS was then used to assess the clinical relevance of biallelic RB1 loss in TCGA Pan-Cancer and in an additional metastatic castration-resistant prostate cancer (mCRPC) cohort.ResultsRBS outperformed the leading existing signature for detecting RB1 biallelic loss across all cancer types in TCGA Pan-Cancer (AUC, 0.89 vs. 0.66). High RBS (RB1 biallelic loss) was associated with promoter hypermethylation (P = 0.008) and gene body hypomethylation (P = 0.002), suggesting RBS could detect epigenetic gene silencing. TCGA Pan-Cancer clinical analyses revealed that high RBS was associated with short progression-free (P < 0.00001), overall (P = 0.0004), and disease-specific (P < 0.00001) survival. On multivariable analyses, high RBS was predictive of shorter progression-free survival in TCGA Pan-Cancer (P = 0.03) and of shorter overall survival in mCRPC (P = 0.004) independently of the number of DNA alterations in RB1.ConclusionsOur study provides the first validated tool to assess RB1 biallelic loss across cancer types based on gene expression. RBS can be useful for analyzing datasets with or without DNA-sequencing results to investigate the emerging prognostic and treatment implications of Rb-pathway disruption.See related commentary by Choudhury and Beltran, p. 4199.
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- 2019
35. Optimizing Time-to-Treatment to achieve durable biochemical disease control after surgery in prostate cancer - A multi-institutional cohort study
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Awasthi, Shivanshu, Gerke, Travis, Park, Jong Y, Asamoah, Francis A, Williams, Vonetta L, Fink, Angelina K, Balkrishnan, Rajesh, Lee, David I, Malkowicz, S Bruce, Lal, Priti, Dhillon, Jasreman, Pow-Sang, Julio M, Rebbeck, Timothy R, and Yamoah, Kosj
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Prostate Cancer ,Prevention ,Patient Safety ,Aging ,Urologic Diseases ,Cancer ,Clinical Research ,Aged ,Follow-Up Studies ,Humans ,Male ,Middle Aged ,Neoplasm Recurrence ,Local ,Prognosis ,Prostatectomy ,Prostatic Neoplasms ,Retrospective Studies ,Survival Rate ,Time-to-Treatment ,Medical and Health Sciences ,Epidemiology ,Biomedical and clinical sciences ,Health sciences - Abstract
BackgroundThe impact of treatment delays on prostate cancer-specific outcomes remains ill-defined. This study investigates the effect of time to treatment on biochemical disease control after prostatectomy.MethodsThis retrospective study includes 1,807 patients who received a prostatectomy as a primary treatment at two large tertiary referral centers from 1987 to 2015. Multivariate cox model with restricted cubic spline was used to identify optimal time to receive treatment and estimate the risk of biochemical recurrence.ResultsMedian follow-up time of the study was 46 (interquartile range, 18-86) months. Time to treatment was subcategorized based on multivariate cubic spline cox model. In multivariate spline model, adjusted for all the pertinent pretreatment variables, inflection point in the risk of biochemical recurrence was observed around 3 months, which further increased after 6 months. Based on spline model, time to treatment was then divided into 0 to 3 months (61.5%), >3 to 6 months (31.1%), and 6 months (7.4%). In the adjusted cox model, initial delays up to 6 months did not adversely affect the outcome; however, time to treatment >6 months had significantly higher risk of biochemical recurrence (HR, 1.84; 95% confidence interval, 1.30-2.60; P < 0.01).ConclusionsThe initial delays up to 6 months in prostate cancer primary treatment may be sustainable without adversely affecting the outcome. However, significant delays beyond 6 months can unfavorably affect biochemical disease control.ImpactTime to treatment can aid clinicians in the decision-making of prostate cancer treatment recommendation and educate patients against unintentional treatment delays.
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- 2019
36. Proceedings of the fifth international Molecular Pathological Epidemiology (MPE) meeting
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Yao, Song, Campbell, Peter T., Ugai, Tomotaka, Gierach, Gretchen, Abubakar, Mustapha, Adalsteinsson, Viktor, Almeida, Jonas, Brennan, Paul, Chanock, Stephen, Golub, Todd, Hanash, Samir, Harris, Curtis, Hathaway, Cassandra A., Kelsey, Karl, Landi, Maria Teresa, Mahmood, Faisal, Newton, Christina, Quackenbush, John, Rodig, Scott, Schultz, Nikolaus, Tearney, Guillermo, Tworoger, Shelley S., Wang, Molin, Zhang, Xuehong, Garcia-Closas, Montserrat, Rebbeck, Timothy R., Ambrosone, Christine B., and Ogino, Shuji
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- 2022
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37. Gaps in completion and timeliness of breast surgery and adjuvant therapy: a retrospective cohort of Haitian patients with nonmetastatic breast cancer
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Fadelu, Temidayo A., Erfani, Parsa, Lormil, Joarly, Damuse, Ruth, Pierre, Viergela, Slater, Sarah, Triedman, Scott A., Shulman, Lawrence N., and Rebbeck, Timothy R.
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- 2022
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38. Variation in Molecularly Defined Prostate Tumor Subtypes by Self-identified Race
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Kensler, Kevin H., Awasthi, Shivanshu, Alshalalfa, Mohamed, Trock, Bruce J., Freedland, Stephen J., Freeman, Michael R., You, Sungyong, Mahal, Brandon A., Den, Robert B., Dicker, Adam P., Karnes, R. Jeffrey, Klein, Eric A., Lal, Priti, Liu, Yang, Davicioni, Elai, Rayford, Walter, Yamoah, Kosj, and Rebbeck, Timothy R.
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- 2022
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39. Cancer in sub-Saharan Africa: a Lancet Oncology Commission
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Ngwa, Wilfred, Addai, Beatrice W, Adewole, Isaac, Ainsworth, Victoria, Alaro, James, Alatise, Olusegun I, Ali, Zipporah, Anderson, Benjamin O, Anorlu, Rose, Avery, Stephen, Barango, Prebo, Bih, Noella, Booth, Christopher M, Brawley, Otis W, Dangou, Jean-Marie, Denny, Lynette, Dent, Jennifer, Elmore, Shekinah N C, Elzawawy, Ahmed, Gashumba, Diane, Geel, Jennifer, Graef, Katy, Gupta, Sumit, Gueye, Serigne-Magueye, Hammad, Nazik, Hessissen, Laila, Ilbawi, Andre M, Kambugu, Joyce, Kozlakidis, Zisis, Manga, Simon, Maree, Lize, Mohammed, Sulma I, Msadabwe, Susan, Mutebi, Miriam, Nakaganda, Annet, Ndlovu, Ntokozo, Ndoh, Kingsley, Ndumbalo, Jerry, Ngoma, Mamsau, Ngoma, Twalib, Ntizimira, Christian, Rebbeck, Timothy R, Renner, Lorna, Romanoff, Anya, Rubagumya, Fidel, Sayed, Shahin, Sud, Shivani, Simonds, Hannah, Sullivan, Richard, Swanson, William, Vanderpuye, Verna, Wiafe, Boateng, and Kerr, David
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- 2022
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40. Changes in Risk Tolerance for Ovarian Cancer Prevention Strategies during the COVID-19 Pandemic: Results of a Discrete Choice Experiment.
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Egleston, Brian L., Daly, Mary B., Lew, Kaitlyn, Bealin, Lisa, Husband, Alexander D., Stopfer, Jill E., Przybysz, Pawel, Tchuvatkina, Olga, Wong, Yu-Ning, Garber, Judy E., and Rebbeck, Timothy R.
- Abstract
Background: Prior to COVID-19, little was known about how risks associated with such a pandemic would compete with and influence patient decision making regarding cancer risk reducing medical decision making. We investigated how the pandemic affected preferences for medical risk-reducing strategies among women at elevated risk of breast or ovarian cancer. Methods: We conducted a discrete choice experiment. Women about to undergo genetic testing and counseling at 2 medical centers participated. Enrollment occurred between 2019 and 2022, allowing us to investigate changes in preferences from before the pandemic to after the pandemic. Women chose from permuted scenarios that specified type of surgery, age of menopause, quality of menopausal symptoms, and risk of ovarian cancer, heart disease, or osteoporosis. Results: A total of 355 women, with a median age of 36 y, participated. In 2019, women were less likely to choose prevention scenarios with higher ovarian cancer risk (odds ratio [OR] = 0.42 per 10-point increase in risk, 95% confidence interval [CI] 0.22–0.61). In June 2020, the effect of higher ovarian cancer risk scenarios on choice was attenuated (OR = 0.86, 95% CI 0.68–1.04), with the effect becoming more salient again by July 2021 (OR = 0.59, 95% CI 0.52–0.67) (P = 0.039 for test of temporal interaction). No other attribute demonstrated a temporal trend. Conclusion: The risks associated with the COVID-19 pandemic may have attenuated the impact of risk of ovarian cancer on choice of risk-reducing prevention strategies for ovarian cancer. The maximum attenuation occurred at the beginning of the pandemic when access to risk-reducing surgery was most restricted. Our findings highlight how individuals evaluate competing health risks and adjust their uptake of cancer prevention strategies when faced with a future pandemic or similar global crisis. Highlights: In this discrete choice experiment, women were much less likely to choose prevention scenarios that had higher ovarian cancer risk prior to the COVID-19 pandemic than after the pandemic. The attenuation of preferences may have persisted through 2022. COVID-19 may have altered the relative importance of factors that motivate women to undergo risk-reducing surgeries. [ABSTRACT FROM AUTHOR]
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- 2025
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41. Prevalence of monoclonal gammopathies and clinical outcomes in a high-risk US population screened by mass spectrometry: a multicentre cohort study
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El-Khoury, Habib, Lee, David J, Alberge, Jean-Baptiste, Redd, Robert, Cea-Curry, Christian J, Perry, Jacqueline, Barr, Hadley, Murphy, Ciara, Sakrikar, Dhananjay, Barnidge, David, Bustoros, Mark, Leblebjian, Houry, Cowan, Anna, Davis, Maya I, Amstutz, Julia, Boehner, Cody J, Lightbody, Elizabeth D, Sklavenitis-Pistofidis, Romanos, Perkins, Mark C, Harding, Stephen, Mo, Clifton C, Kapoor, Prashant, Mikhael, Joseph, Borrello, Ivan M, Fonseca, Rafael, Weiss, Scott T, Karlson, Elizabeth, Trippa, Lorenzo, Rebbeck, Timothy R, Getz, Gad, Marinac, Catherine R, and Ghobrial, Irene M
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- 2022
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42. American Society for Gastrointestinal Endoscopy guideline on screening for pancreatic cancer in individuals with genetic susceptibility: methodology and review of evidence
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Calderwood, Audrey H., Sawhney, Mandeep S., Thosani, Nirav C., Rebbeck, Timothy R., Wani, Sachin, Canto, Marcia I., Fishman, Douglas S., Golan, Talia, Hidalgo, Manuel, Kwon, Richard S., Riegert-Johnson, Douglas L., Sahani, Dushyant V., Stoffel, Elena M., Vollmer, Charles M., Jr., Al-Haddad, Mohammad A., Amateau, Stuart K., Buxbaum, James L., DiMaio, Christopher J., Fujii-Lau, Larissa L., Jamil, Laith H., Jue, Terry L., Law, Joanna K., Lee, Jeffrey K., Naveed, Mariam, Pawa, Swati, Storm, Andrew C., and Qumseya, Bashar J.
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- 2022
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43. ASGE guideline on screening for pancreatic cancer in individuals with genetic susceptibility: summary and recommendations
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Sawhney, Mandeep S., Calderwood, Audrey H., Thosani, Nirav C., Rebbeck, Timothy R., Wani, Sachin, Canto, Marcia I., Fishman, Douglas S., Golan, Talia, Hidalgo, Manuel, Kwon, Richard S., Riegert-Johnson, Douglas L., Sahani, Dushyant V., Stoffel, Elena M., Vollmer, Charles M., Jr., and Qumseya, Bashar J.
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- 2022
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44. Impact of neighborhood socioeconomic status, income segregation, and greenness on blood biomarkers of inflammation
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Iyer, Hari S., Hart, Jaime E., James, Peter, Elliott, Elise G., DeVille, Nicole V., Holmes, Michelle D., De Vivo, Immaculata, Mucci, Lorelei A., Laden, Francine, and Rebbeck, Timothy R.
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- 2022
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45. The distinct impacts of race and genetic ancestry on health
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Rebbeck, Timothy R., Mahal, Brandon, Maxwell, Kara N., Garraway, Isla P., and Yamoah, Kosj
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- 2022
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46. AACR White Paper: Shaping the Future of Cancer Prevention – A Roadmap for Advancing Science and Public Health
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Lippman, Scott M, Abate-Shen, Cory, Colbert Maresso, Karen L, Colditz, Graham A, Dannenberg, Andrew J, Davidson, Nancy E, Disis, Mary L, DuBois, Raymond N, Szabo, Eva, Giuliano, Anna R, Hait, William N, Lee, J Jack, Kensler, Thomas W, Kramer, Barnett S, Limburg, Paul, Maitra, Anirban, Martinez, Maria Elena, Rebbeck, Timothy R, Schmitz, Kathryn H, Vilar, Eduardo, and Hawk, Ernest T
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Health Disparities ,Digestive Diseases ,Genetics ,Human Genome ,Prevention ,Cancer ,Rare Diseases ,Good Health and Well Being ,Biomedical Research ,Congresses as Topic ,Health Plan Implementation ,Health Status Disparities ,Humans ,Neoplasms ,Obesity ,Primary Prevention ,Public Health ,Societies ,Medical ,Societies ,Scientific ,United States ,Clinical Sciences ,Oncology & Carcinogenesis ,Clinical sciences ,Oncology and carcinogenesis - Abstract
The recent pace, extent, and impact of paradigm-changing cancer prevention science has been remarkable. The American Association for Cancer Research (AACR) convened a 3-day summit, aligned with five research priorities: (i) Precancer Atlas (PCA). (ii) Cancer interception. (iii) Obesity-cancer linkage, a global epidemic of chronic low-grade inflammation. (iv) Implementation science. (v) Cancer disparities. Aligned with these priorities, AACR co-led the Lancet Commission to formally endorse and accelerate the NCI Cancer Moonshot program, facilitating new global collaborative efforts in cancer control. The expanding scope of creative impact is perhaps most startling-from NCI-funded built environments to AACR Team Science Awarded studies of Asian cancer genomes informing global primary prevention policies; cell-free epigenetic marks identifying incipient neoplastic site; practice-changing genomic subclasses in myeloproliferative neoplasia (including germline variant tightly linked to JAK2 V617F haplotype); universal germline genetic testing for pancreatic cancer; and repurposing drugs targeting immune- and stem-cell signals (e.g., IL-1β, PD-1, RANK-L) to cancer interception. Microbiota-driven IL-17 can induce stemness and transformation in pancreatic precursors (identifying another repurposing opportunity). Notable progress also includes hosting an obesity special conference (connecting epidemiologic and molecular perspectives to inform cancer research and prevention strategies), co-leading concerted national implementation efforts in HPV vaccination, and charting the future elimination of cancer disparities by integrating new science tools, discoveries and perspectives into community-engaged research, including targeted counter attacks on e-cigarette ad exploitation of children, Hispanics and Blacks. Following this summit, two unprecedented funding initiatives were catalyzed to drive cancer prevention research: the NCI Cancer Moonshot (e.g., PCA and disparities); and the AACR-Stand Up To Cancer bold "Cancer Interception" initiative.
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- 2018
47. Inherited Genetic Variants Associated with Melanoma BRAF/NRAS Subtypes
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Thomas, Nancy E, Edmiston, Sharon N, Orlow, Irene, Kanetsky, Peter A, Luo, Li, Gibbs, David C, Parrish, Eloise A, Hao, Honglin, Busam, Klaus J, Armstrong, Bruce K, Kricker, Anne, Cust, Anne E, Anton-Culver, Hoda, Gruber, Stephen B, Gallagher, Richard P, Zanetti, Roberto, Rosso, Stefano, Sacchetto, Lidia, Dwyer, Terence, Ollila, David W, Begg, Colin B, Berwick, Marianne, Conway, Kathleen, Begg, Colin, Roy, Pampa, Reiner, Anne, Leong, Siok, Guerrero, Sergio Corrales, Sadeghi, Keimya, Boyce, Tawny W, Venn, Alison, Tucker, Paul, Marrett, Loraine D, From, Lynn, Huang, Shu-Chen, Groben, Pamela A, Parrish, Eloise, Frank, Jill S, Rebbeck, Timothy R, Taylor, Julia Lee, and Madronich, Sasha
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Human Genome ,Cancer ,Genetics ,Genetic Testing ,2.1 Biological and endogenous factors ,Adult ,Aged ,Female ,GTP Phosphohydrolases ,Genetic Association Studies ,Genotype ,Group VI Phospholipases A2 ,Humans ,Interferon Regulatory Factors ,Male ,Melanoma ,Membrane Proteins ,Middle Aged ,Mutation ,Polymorphism ,Single Nucleotide ,Proto-Oncogene Proteins B-raf ,Risk ,Skin Neoplasms ,GEM Study Group ,Clinical Sciences ,Dermatology & Venereal Diseases ,Clinical sciences - Abstract
BRAF and NRAS mutations arise early in melanoma development, but their associations with low-penetrance melanoma susceptibility loci remain unknown. In the Genes, Environment and Melanoma Study, 1,223 European-origin participants had their incident invasive primary melanomas screened for BRAF/NRAS mutations and germline DNA genotyped for 47 single-nucleotide polymorphisms identified as low-penetrant melanoma-risk variants. We used multinomial logistic regression to simultaneously examine each single-nucleotide polymorphism's relationship to BRAF V600E, BRAF V600K, BRAF other, and NRAS+ relative to BRAF-/NRAS- melanoma adjusted for study features. IRF4 rs12203592*T was associated with BRAF V600E (odds ratio [OR] = 0.59, 95% confidence interval [CI] = 0.43-0.79) and V600K (OR = 0.65, 95% CI = 0.41-1.03), but not BRAF other or NRAS+ melanoma. A global test of etiologic heterogeneity (Pglobal = 0.001) passed false discovery (Pglobal = 0.0026). PLA2G6 rs132985*T was associated with BRAF V600E (OR = 1.32, 95% CI = 1.05-1.67) and BRAF other (OR = 1.82, 95% CI = 1.11-2.98), but not BRAF V600K or NRAS+ melanoma. The test for etiologic heterogeneity (Pglobal) was 0.005. The IRF4 rs12203592 associations were slightly attenuated after adjustment for melanoma-risk phenotypes. The PLA2G6 rs132985 associations were independent of phenotypes. IRF4 and PLA2G6 inherited genotypes may influence melanoma BRAF/NRAS subtype development.
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- 2018
48. Mutational spectrum in a worldwide study of 29,700 families with BRCA1 or BRCA2 mutations.
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Rebbeck, Timothy R, Friebel, Tara M, Friedman, Eitan, Hamann, Ute, Huo, Dezheng, Kwong, Ava, Olah, Edith, Olopade, Olufunmilayo I, Solano, Angela R, Teo, Soo-Hwang, Thomassen, Mads, Weitzel, Jeffrey N, Chan, TL, Couch, Fergus J, Goldgar, David E, Kruse, Torben A, Palmero, Edenir Inêz, Park, Sue Kyung, Torres, Diana, van Rensburg, Elizabeth J, McGuffog, Lesley, Parsons, Michael T, Leslie, Goska, Aalfs, Cora M, Abugattas, Julio, Adlard, Julian, Agata, Simona, Aittomäki, Kristiina, Andrews, Lesley, Andrulis, Irene L, Arason, Adalgeir, Arnold, Norbert, Arun, Banu K, Asseryanis, Ella, Auerbach, Leo, Azzollini, Jacopo, Balmaña, Judith, Barile, Monica, Barkardottir, Rosa B, Barrowdale, Daniel, Benitez, Javier, Berger, Andreas, Berger, Raanan, Blanco, Amie M, Blazer, Kathleen R, Blok, Marinus J, Bonadona, Valérie, Bonanni, Bernardo, Bradbury, Angela R, Brewer, Carole, Buecher, Bruno, Buys, Saundra S, Caldes, Trinidad, Caliebe, Almuth, Caligo, Maria A, Campbell, Ian, Caputo, Sandrine M, Chiquette, Jocelyne, Chung, Wendy K, Claes, Kathleen BM, Collée, J Margriet, Cook, Jackie, Davidson, Rosemarie, de la Hoya, Miguel, De Leeneer, Kim, de Pauw, Antoine, Delnatte, Capucine, Diez, Orland, Ding, Yuan Chun, Ditsch, Nina, Domchek, Susan M, Dorfling, Cecilia M, Velazquez, Carolina, Dworniczak, Bernd, Eason, Jacqueline, Easton, Douglas F, Eeles, Ros, Ehrencrona, Hans, Ejlertsen, Bent, EMBRACE, Engel, Christoph, Engert, Stefanie, Evans, D Gareth, Faivre, Laurence, Feliubadaló, Lidia, Ferrer, Sandra Fert, Foretova, Lenka, Fowler, Jeffrey, Frost, Debra, Galvão, Henrique CR, Ganz, Patricia A, Garber, Judy, Gauthier-Villars, Marion, Gehrig, Andrea, GEMO Study Collaborators, Gerdes, Anne-Marie, Gesta, Paul, Giannini, Giuseppe, Giraud, Sophie, and Glendon, Gord
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EMBRACE ,GEMO Study Collaborators ,HEBON ,Humans ,BRCA1 Protein ,BRCA2 Protein ,Family ,Mutation ,Geography ,Internationality ,Databases ,Genetic ,BRCA1 ,BRCA2 ,breast cancer ,ethnicity ,geography ,mutation ,ovarian cancer ,Databases ,Genetic ,Genetics & Heredity ,Genetics ,Clinical Sciences - Abstract
The prevalence and spectrum of germline mutations in BRCA1 and BRCA2 have been reported in single populations, with the majority of reports focused on White in Europe and North America. The Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA) has assembled data on 18,435 families with BRCA1 mutations and 11,351 families with BRCA2 mutations ascertained from 69 centers in 49 countries on six continents. This study comprehensively describes the characteristics of the 1,650 unique BRCA1 and 1,731 unique BRCA2 deleterious (disease-associated) mutations identified in the CIMBA database. We observed substantial variation in mutation type and frequency by geographical region and race/ethnicity. In addition to known founder mutations, mutations of relatively high frequency were identified in specific racial/ethnic or geographic groups that may reflect founder mutations and which could be used in targeted (panel) first pass genotyping for specific populations. Knowledge of the population-specific mutational spectrum in BRCA1 and BRCA2 could inform efficient strategies for genetic testing and may justify a more broad-based oncogenetic testing in some populations.
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- 2018
49. The tumor mutational landscape of BRCA2-deficient primary and metastatic prostate cancer
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Kensler, Kevin H., Baichoo, Shakuntala, Pathania, Shailja, and Rebbeck, Timothy R.
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- 2022
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50. Testing the generalizability of ancestry-specific polygenic risk scores to predict prostate cancer in sub-Saharan Africa
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Kim, Michelle S., Naidoo, Daphne, Hazra, Ujani, Quiver, Melanie H., Chen, Wenlong C., Simonti, Corinne N., Kachambwa, Paidamoyo, Harlemon, Maxine, Agalliu, Ilir, Baichoo, Shakuntala, Fernandez, Pedro, Hsing, Ann W., Jalloh, Mohamed, Gueye, Serigne M., Niang, Lamine, Diop, Halimatou, Ndoye, Medina, Snyper, Nana Yaa, Adusei, Ben, Mensah, James E., Abrahams, Afua O. D., Biritwum, Richard, Adjei, Andrew A., Adebiyi, Akindele O., Shittu, Olayiwola, Ogunbiyi, Olufemi, Adebayo, Sikiru, Aisuodionoe-Shadrach, Oseremen I., Nwegbu, Maxwell M., Ajibola, Hafees O., Oluwole, Olabode P., Jamda, Mustapha A., Singh, Elvira, Pentz, Audrey, Joffe, Maureen, Darst, Burcu F., Conti, David V., Haiman, Christopher A., Spies, Petrus V., van der Merwe, André, Rohan, Thomas E., Jacobson, Judith, Neugut, Alfred I., McBride, Jo, Andrews, Caroline, Petersen, Lindsay N., Rebbeck, Timothy R., and Lachance, Joseph
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- 2022
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