13 results on '"Raval-Fernandes S"'
Search Results
2. Targeting vault nanoparticles to specific cell surface receptors.
- Author
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Kickhoefer VA, Han M, Raval-Fernandes S, Poderycki MJ, Moniz RJ, Vaccari D, Silvestry M, Stewart PL, Kelly KA, and Rome LH
- Subjects
- Animals, Binding Sites, Cell Line, Tumor, Dendritic Cells metabolism, Epitopes chemistry, ErbB Receptors chemistry, HeLa Cells, Humans, Immunoglobulin G chemistry, Mice, Protein Binding, Protein Structure, Tertiary, Receptors, Cell Surface metabolism, Cell Membrane metabolism, Nanoparticles chemistry, Receptors, Cell Surface chemistry
- Abstract
As a naturally occurring nanocapsule abundantly expressed in nearly all-eukaryotic cells, the barrel-shaped vault particle is perhaps an ideal structure to engineer for targeting to specific cell types. Recombinant vault particles self-assemble from 96 copies of the major vault protein (MVP), have dimensions of 72.5 x 41 nm, and have a hollow interior large enough to encapsulate hundreds of proteins. In this study, three different tags were engineered onto the C-terminus of MVP: an 11 amino acid epitope tag, a 33 amino acid IgG-binding peptide, and the 55 amino acid epidermal growth factor (EGF). These modified vaults were produced using a baculovirus expression system. Our studies demonstrate that recombinant vaults assembled from MVPs containing C-terminal peptide extensions display these tags at the top and bottom of the vault on the outside of the particle and can be used to specifically bind the modified vaults to epithelial cancer cells (A431) via the epidermal growth factor receptor (EGFR), either directly (EGF modified vaults) or as mediated by a monoclonal antibody (anti-EGFR) bound to recombinant vaults containing the IgG-binding peptide. The ability to target vaults to specific cells represents an essential advance toward using recombinant vaults as delivery vehicles.
- Published
- 2009
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3. A vault nanoparticle vaccine induces protective mucosal immunity.
- Author
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Champion CI, Kickhoefer VA, Liu G, Moniz RJ, Freed AS, Bergmann LL, Vaccari D, Raval-Fernandes S, Chan AM, Rome LH, and Kelly KA
- Subjects
- Animals, Antigens, Bacterial administration & dosage, Antigens, Bacterial therapeutic use, Bacterial Outer Membrane Proteins administration & dosage, Bacterial Outer Membrane Proteins therapeutic use, Chlamydia muridarum immunology, Drug Compounding methods, Immunity, Mucosal immunology, Inflammation prevention & control, Mice, Mice, Inbred C57BL, Treatment Outcome, Bacterial Vaccines administration & dosage, Immunity, Mucosal drug effects, Nanoparticles administration & dosage
- Abstract
Background: Generation of robust cell-mediated immune responses at mucosal surfaces while reducing overall inflammation is a primary goal for vaccination. Here we report the use of a recombinant nanoparticle as a vaccine delivery platform against mucosal infections requiring T cell-mediated immunity for eradication., Methodology/principal Findings: We encapsulated an immunogenic protein, the major outer membrane protein (MOMP) of Chlamydia muridarum, within hollow, vault nanocapsules (MOMP-vaults) that were engineered to bind IgG for enhanced immunity. Intranasal immunization (i.n) with MOMP-vaults induced anti-chlamydial immunity plus significantly attenuated bacterial burden following challenge infection. Vault immunization induced anti-chlamydial immune responses and inflammasome formation but did not activate toll-like receptors. Moreover, MOMP-vault immunization enhanced microbial eradication without the inflammation usually associated with adjuvants., Conclusions/significance: Vault nanoparticles containing immunogenic proteins delivered to the respiratory tract by the i.n. route can act as "smart adjuvants" for inducing protective immunity at distant mucosal surfaces while avoiding destructive inflammation.
- Published
- 2009
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4. The vault exterior shell is a dynamic structure that allows incorporation of vault-associated proteins into its interior.
- Author
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Poderycki MJ, Kickhoefer VA, Kaddis CS, Raval-Fernandes S, Johansson E, Zink JI, Loo JA, and Rome LH
- Subjects
- Animals, Humans, Protein Structure, Quaternary, Rats, Recombinant Proteins chemistry, Spectrometry, Mass, Electrospray Ionization methods, Carrier Proteins chemistry, Poly(ADP-ribose) Polymerases chemistry, RNA-Binding Proteins chemistry, Vault Ribonucleoprotein Particles chemistry
- Abstract
Vaults are 13 million Da ribonucleoprotein particles with a highly conserved structure. Expression and assembly by multimerization of an estimated 96 copies of a single protein, termed the major vault protein (MVP), is sufficient to form the minimal structure and entire exterior shell of the barrel-shaped vault particle. Multiple copies of two additional proteins, VPARP and TEP1, and a small untranslated vault RNA are also associated with vaults. We used the Sf9 insect cell expression system to form MVP-only recombinant vaults and performed a series of protein-mixing experiments to test whether this particle shell is able to exclude exogenous proteins from interacting with the vault interior. Surprisingly, we found that VPARP and TEP1 are able to incorporate into vaults even after the formation of the MVP vault particle shell is complete. Electrospray molecular mobility analysis and spectroscopic studies of vault-interacting proteins were used to confirm this result. Our results demonstrate that the protein shell of the recombinant vault particle is a dynamic structure and suggest a possible mechanism for in vivo assembly of vault-interacting proteins into preformed vaults. Finally, this study suggests that the vault interior may functionally interact with the cellular milieu.
- Published
- 2006
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5. Increased susceptibility of vault poly(ADP-ribose) polymerase-deficient mice to carcinogen-induced tumorigenesis.
- Author
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Raval-Fernandes S, Kickhoefer VA, Kitchen C, and Rome LH
- Subjects
- Animals, Carcinogens, Carrier Proteins genetics, Dimethylhydrazines, Female, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Mice, Knockout, Poly(ADP-ribose) Polymerases genetics, RNA-Binding Proteins, Urethane, Vault Ribonucleoprotein Particles genetics, Colonic Neoplasms chemically induced, Colonic Neoplasms enzymology, Lung Neoplasms chemically induced, Lung Neoplasms enzymology, Poly(ADP-ribose) Polymerases deficiency, Vault Ribonucleoprotein Particles deficiency
- Abstract
Vault poly(ADP-ribose) polymerase (VPARP) and telomerase-associated protein 1 (TEP1) are components of the vault ribonucleoprotein complex. Vaults have been implicated in multidrug resistance of human tumors and are thought to be involved in macromolecular assembly and/or transport. Previous studies showed that VPARP-deficient mice were viable, fertile, and did not display any vault-related or telomerase-related phenotype, whereas disruption of telomerase-associated protein 1 in mice led to reduced stability of the vault RNA and affected its stable association with vaults, although there were no telomerase-related changes. In this study, we evaluated the susceptibility of Vparp-/- and Tep1-/- mice to dimethylhydrazine-induced colon tumorigenesis and urethane-induced lung tumorigenesis. Mice received i.p. injections of either 1 g/kg body weight of urethane twice a week for 2 weeks or 20 mg/kg body weight of dimethylhydrazine once a week for 10 weeks and were analyzed after 10 and 60 weeks, respectively. The colon tumor incidence and multiplicity were significantly higher and colon tumor latency was significantly shorter in Vparp-/- mice compared with wild-type mice. Increased colon tumor incidence, multiplicity, and reduced tumor latency were also seen in Tep1-/- mice, however, these results were statistically not significant. Lung tumor multiplicities were increased in both Vparp-/- and Tep1-/- mice but were not significant. The increase in carcinogen-induced tumors in VPARP-deficient mice is the only phenotype observed to date, and suggests a possible role for VPARP, directly or indirectly, in chemically induced neoplasia.
- Published
- 2005
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6. Engineering of vault nanocapsules with enzymatic and fluorescent properties.
- Author
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Kickhoefer VA, Garcia Y, Mikyas Y, Johansson E, Zhou JC, Raval-Fernandes S, Minoofar P, Zink JI, Dunn B, Stewart PL, and Rome LH
- Subjects
- Biological Transport, Active, Cryoelectron Microscopy, Fluorescent Dyes chemistry, Fluorescent Dyes metabolism, Green Fluorescent Proteins chemistry, Green Fluorescent Proteins genetics, Green Fluorescent Proteins metabolism, Green Fluorescent Proteins ultrastructure, HeLa Cells, Humans, Image Processing, Computer-Assisted, In Vitro Techniques, Luciferases chemistry, Luciferases genetics, Luciferases metabolism, Models, Molecular, Molecular Conformation, Protein Engineering, Recombinant Fusion Proteins chemistry, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Recombinant Fusion Proteins ultrastructure, Vault Ribonucleoprotein Particles genetics, Vault Ribonucleoprotein Particles metabolism, Nanostructures chemistry, Nanostructures ultrastructure, Vault Ribonucleoprotein Particles chemistry, Vault Ribonucleoprotein Particles ultrastructure
- Abstract
One of the central issues facing the emerging field of nanotechnology is cellular compatibility. Nanoparticles have been proposed for diagnostic and therapeutic applications, including drug delivery, gene therapy, biological sensors, and controlled catalysis. Viruses, liposomes, peptides, and synthetic and natural polymers have been engineered for these applications, yet significant limitations continue to prevent their use. Avoidance of the body's natural immune system, lack of targeting specificity, and the inability to control packaging and release are remaining obstacles. We have explored the use of a naturally occurring cellular nanoparticle known as the vault, which is named for its morphology with multiple arches reminiscent of cathedral ceilings. Vaults are 13-MDa ribonucleoprotein particles with an internal cavity large enough to sequester hundreds of proteins. Here, we report a strategy to target and sequester biologically active materials within the vault cavity. Attachment of a vault-targeting peptide to two proteins, luciferase and a variant of GFP, resulted in their sequestration within the vault cavity. The targeted proteins confer enzymatic and fluorescent properties on the recombinant vaults, both of which can be detected by their emission of light. The modified vaults are compatible with living cells. The ability to engineer vault particles with designed properties and functionalities represents an important step toward development of a biocompatible nanocapsule.
- Published
- 2005
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7. Cryoelectron microscopy imaging of recombinant and tissue derived vaults: localization of the MVP N termini and VPARP.
- Author
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Mikyas Y, Makabi M, Raval-Fernandes S, Harrington L, Kickhoefer VA, Rome LH, and Stewart PL
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Carrier Proteins chemistry, Carrier Proteins genetics, Carrier Proteins ultrastructure, Cryoelectron Microscopy, DNA genetics, Humans, Image Processing, Computer-Assisted, In Vitro Techniques, Macromolecular Substances, Models, Molecular, Molecular Sequence Data, Phosphate-Binding Proteins, Poly(ADP-ribose) Polymerases chemistry, RNA-Binding Proteins, Rats, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins ultrastructure, Vault Ribonucleoprotein Particles chemistry, Poly(ADP-ribose) Polymerases ultrastructure, Vault Ribonucleoprotein Particles ultrastructure
- Abstract
The vault is a highly conserved ribonucleoprotein particle found in all higher eukaryotes. It has a barrel-shaped structure and is composed of the major vault protein (MVP); vault poly(ADP-ribose) polymerase (VPARP); telomerase-associated protein 1 (TEP1); and small untranslated RNA (vRNA). Although its strong conservation and high abundance indicate an important cellular role, the function of the vault is unknown. In humans, vaults have been implicated in multidrug resistance during chemotherapy. Recently, assembly of recombinant vaults has been established in insect cells expressing only MVP. Here, we demonstrate that co-expression of MVP with one or both of the other two vault proteins results in their co-assembly into regularly shaped vaults. Particles assembled from MVP with N-terminal peptide tags of various length are compared. Cryoelectron microscopy (cryoEM) and single-particle image reconstruction methods were used to determine the structure of nine recombinant vaults of various composition, as well as wild-type and TEP1-deficient mouse vaults. Recombinant vaults with MVP N-terminal peptide tags showed internal density that varied in size with the length of the tag. Reconstruction of a recombinant vault with a cysteine-rich tag revealed 48-fold rotational symmetry for the vault. A model is proposed for the organization of MVP within the vault with all of the MVP N termini interacting non-covalently at the vault midsection and 48 copies of MVP forming each half vault. CryoEM difference mapping localized VPARP to three density bands lining the inner surface of the vault. Difference maps designed to localize TEP1 showed only weak density inside of the caps, suggesting that TEP1 may interact with MVP via a small interaction region. In the absence of atomic-resolution structures for either VPARP or TEP1, fold recognition methods were applied. A total of 21 repeats were predicted for the TEP1 WD-repeat domain, suggesting an unusually large beta-propeller fold.
- Published
- 2004
- Full Text
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8. Analysis of MVP and VPARP promoters indicates a role for chromatin remodeling in the regulation of MVP.
- Author
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Emre N, Raval-Fernandes S, Kickhoefer VA, and Rome LH
- Subjects
- Animals, Base Sequence, Butyrates pharmacology, Carrier Proteins, Drug Resistance, Multiple, Drug Resistance, Neoplasm, Humans, Mice, Molecular Sequence Data, Promoter Regions, Genetic, RNA-Binding Proteins, Tumor Cells, Cultured, Up-Regulation, Chromatin Assembly and Disassembly genetics, Poly(ADP-ribose) Polymerases genetics, Vault Ribonucleoprotein Particles genetics
- Abstract
Multi-drug-resistant cancer cells frequently express elevated levels of ribonucleoprotein complexes termed vaults. The increased expression of vault proteins and their mRNAs has led to the suggestion that vaults may play a direct role in preventing drug toxicity. To further understand vault component up-regulation, the three proteins that comprise the vault, the major vault protein (MVP), vault poly(ADP-ribose) polymerase (VPARP), and telomerase-associated protein-1 (TEP1), were examined with respect to gene amplification and drug-induced chromatin remodeling. Gene amplification was not responsible for increased vault component levels in multi-drug-resistant cancer cell lines. The TATA-less murine MVP and human VPARP promoters were identified and functionally characterized. There was no significant activation of either the MVP or VPARP promoters in drug-resistant cell lines in comparison to their parental, drug-sensitive counterparts. Treatment of various cell lines with sodium butyrate, an inhibitor of histone deacetylase (HDAC), led to an increase in vault component protein levels. Furthermore, treatment with trichostatin A (TSA), a more specific inhibitor of HDAC, caused an increase in MVP protein, mRNA, and promoter activity. These results suggest that up-regulation of MVP in multi-drug resistance (MDR) may involve chromatin remodeling.
- Published
- 2004
- Full Text
- View/download PDF
9. Assembly of vault-like particles in insect cells expressing only the major vault protein.
- Author
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Stephen AG, Raval-Fernandes S, Huynh T, Torres M, Kickhoefer VA, and Rome LH
- Subjects
- Animals, Cells, Cultured, Rats, Spodoptera genetics, Transfection, Vault Ribonucleoprotein Particles genetics, Vault Ribonucleoprotein Particles metabolism, Vault Ribonucleoprotein Particles ultrastructure
- Abstract
Vaults are the largest (13 megadalton) cytoplasmic ribonucleoprotein particles known to exist in eukaryotic cells. They have a unique barrel-shaped structure with 8-fold symmetry. Although the precise function of vaults is unknown, their wide distribution and highly conserved morphology in eukaryotes suggests that their function is essential and that their structure must be important for their function. The 100-kDa major vault protein (MVP) constitutes approximately 75% of the particle mass and is predicted to form the central barrel portion of the vault. To gain insight into the mechanisms for vault assembly, we have expressed rat MVP in the Sf9 insect cell line using a baculovirus vector. Our results show that the expression of the rat MVP alone can direct the formation of particles that have biochemical characteristics similar to endogenous rat vaults and display the distinct vault-like morphology when negatively stained and examined by electron microscopy. These particles are the first example of a single protein polymerizing into a non-spherically, non-cylindrically symmetrical structure. Understanding vault assembly will enable us to design agents that disrupt vault formation and hence aid in elucidating vault function in vivo.
- Published
- 2001
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10. Up-regulation of vaults may be necessary but not sufficient for multidrug resistance.
- Author
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Siva AC, Raval-Fernandes S, Stephen AG, LaFemina MJ, Scheper RJ, Kickhoefer VA, and Rome LH
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- Carrier Proteins biosynthesis, Carrier Proteins genetics, Female, Gene Expression Regulation, Neoplastic, Humans, Neoplasms etiology, Neoplasms metabolism, RNA, Messenger biosynthesis, RNA-Binding Proteins, Telomerase metabolism, Transfection, Tumor Cells, Cultured, Up-Regulation, Drug Resistance, Multiple, Drug Resistance, Neoplasm, Neoplasms genetics, Vault Ribonucleoprotein Particles biosynthesis, Vault Ribonucleoprotein Particles genetics
- Abstract
Vaults are ribonucleoprotein complexes comprised of the 100 kDa major vault protein (MVP), the 2 high m.w. vault proteins p193 (VPARP) and p240 (TEP1) and an untranslated small RNA (vRNA). Increased levels of MVP, vault-associated vRNA and vaults have been linked directly to non-P-glycoprotein-mediated multidrug resistance (MDR). To further characterize the putative role of vaults in MDR, expression levels of all of the vault proteins were examined in various MDR cell lines. Subcellular fractionation of vault particles revealed that all 3 vault proteins are increased in MDR cells compared to the parental, drug-sensitive cells. Furthermore, protein analysis of subcellular fractions of the drug-sensitive, MVP-transfected AC16 cancer cell line indicated that vault levels are increased, in this stable line. Since TEP1 is shared by both vaults and the telomerase complex, TEP1 protein (and vault) levels were compared with telomerase activity in a variety of cell lines, including various MDR lines. Our studies demonstrate that while vault levels may be a good predictor of drug resistance, their up-regulation alone is not sufficient to confer the drug-resistant phenotype. This implies a requirement of an additional factor(s) for vault-mediated MDR., (Copyright 2001 Wiley-Liss, Inc.)
- Published
- 2001
- Full Text
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11. Analysis of sulfatide from rat cerebellum and multiple sclerosis white matter by negative ion electrospray mass spectrometry.
- Author
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Marbois BN, Faull KF, Fluharty AL, Raval-Fernandes S, and Rome LH
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- Aged, Aged, 80 and over, Aging metabolism, Animals, Brain Chemistry, Demyelinating Diseases metabolism, Female, Humans, Male, Middle Aged, Myelin Proteins chemistry, Myelin Proteins metabolism, Rats, Rats, Sprague-Dawley, Sulfoglycosphingolipids metabolism, Cerebellum metabolism, Mass Spectrometry methods, Multiple Sclerosis metabolism, Sulfoglycosphingolipids chemistry
- Abstract
The accumulation of sulfatide (sulfatogalactosyl cerebroside) and changes in the sulfatide species present have been examined in the cerebellum of day 6-32 aged rats and in multiple sclerosis (MS) tissue samples. Negative ion electrospray mass spectrometry with daughter and parent ion analyses were used to distinguish the fatty acyl character in the amide linkage of sulfatide; measurement was done by selected ion and multiple reaction monitoring of individually identified sulfatide molecules. Sulfatide accumulation in rat cerebellum shows that 18:0- and hydroxylated 18:0-sulfatide are the first sulfatide molecules detectable. Very long fatty acyl chain sulfatide molecules (>20:0) are present at day 7 and the ratio of non-hydroxylated compared to hydroxylated sulfatide rises as the amount of non-hydroxylated sulfatide increases. 24:1-sulfatide accumulates at a ratio of about 3:1 over 24:0-sulfatide during active myelination. Analyses of the sulfatide in human tissue have shown differences between MS plaque tissues, normal appearing adjacent white matter and control tissues. The findings show that total sulfatide is reduced by 60% in the plaque matter and decreased 25% in adjacent normal appearing white matter. There are significant increases (P=0.05) in the amount of hydroxylation of sulfatide, demonstrated by an increase in the percentage of hydroxylated h24:0-sulfatide (hydroxy-lignoceroyl sulfatide).
- Published
- 2000
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12. Role of axonal components during myelination.
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Raval-Fernandes S and Rome LH
- Subjects
- Animals, Antibodies, Monoclonal, Central Nervous System physiology, Cerebellum physiology, Culture Techniques, Electrophoresis, Polyacrylamide Gel, Immunoblotting, Immunohistochemistry, Mice, Neurofilament Proteins physiology, Neurons physiology, Oligodendroglia physiology, Peripheral Nervous System physiology, Rats, Time Factors, Axons physiology, Myelin Sheath physiology
- Abstract
Myelination is a multistep ordered process whereby Schwann cells in the peripheral nervous system (PNS) and oligodendrocytes in the central nervous system (CNS), produce and extend membranous processes that envelop axons. Mechanisms that regulate this complex process are not well understood. Advances in deciphering the regulatory components of myelination have been carried out primarily in the PNS and although the mechanisms for triggering and directing myelination are not known, it is well established that myelination does not occur in the absence of axons or axon/neuron-derived factors. This appears to be true both in PNS and CNS. Progress in understanding CNS myelinogenesis has been relatively slow because of the unavailability of a suitable culture system, which, in turn, is partly due to complexity in the cellular organization of the CNS. Though the myelin composition differs between PNS and CNS, the regulation of myelination seems to parallel rather than differ between these two systems. This article reviews the regulatory role of axonal components during myelination. The first half consists of an overview of in vitro and in vivo studies carried out in the nervous system. The second half discusses the use of a cerebellar slice culture system and generation of anti-axolemma monoclonal antibodies to investigate the role of axonal membrane components that participate in myelination. It also describes the characterization of an axonal protein involved in myelination.
- Published
- 1998
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13. Axonal proteins involved in myelination: characterization of a collagen-like protein.
- Author
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Raval-Fernandes S, Sawant LA, Aebersold RH, Ducret A, and Rome LH
- Subjects
- Amino Acid Sequence, Animals, Blotting, Northern, Central Nervous System chemistry, Central Nervous System immunology, Collagen analysis, Collagen genetics, Fluorescent Antibody Technique, Molecular Sequence Data, Myelin Sheath immunology, Myelin Sheath physiology, Peripheral Nervous System chemistry, Peripheral Nervous System immunology, RNA, Messenger analysis, Rats, Sciatic Nerve chemistry, Sciatic Nerve cytology, Antibodies, Monoclonal, Axons chemistry, Collagen chemistry, Myelin Sheath chemistry
- Abstract
An anti-axolemma monoclonal antibody, designated G21.3, has been isolated in order to understand molecular mechanisms involved in myelination. Both biochemical and morphological studies showed that the monoclonal antibody inhibits myelin production by oligodendrocytes in cerebellar slice cultures. On Western blots of axolemma preparations, the antibody recognized 140- and 120-kD proteins. The present study involves the isolation and characterization of the G21.3 antigen. The G21.3-immunoreactive proteins of 140 and 120 kD were purified from the adult rat sciatic nerve and amino acid sequencing of these proteins revealed significant homology to alpha I and alpha II chains of collagen type I. Biochemical and Western blot analysis using pure collagen, collagen I antibody and collagenase D suggest that the antigen isolated from sciatic nerve is collagen. However, immunofluorescence studies using the G21.3 antibody, collagen I antibody, collagenase D and Northern blot analysis using a collagen probe do not fully support the view that the G21.3 antigen in the CNS is also a collagen. We conclude that the G21.3 antigen is a collagen-like protein involved in CNS myelination.
- Published
- 1997
- Full Text
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