17 results on '"Raule N"'
Search Results
2. Effect of trunk girdling on fruit production, quality and storability in A. chinensis var. chinensis ‘Zesy002’ in Italy
- Author
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Donati, I., primary, Onofrietti, C., additional, Raule, N., additional, Cellini, A., additional, Manzoni, L., additional, Spinelli, F., additional, and Xylogiannis, E., additional
- Published
- 2023
- Full Text
- View/download PDF
3. Effect of different biostimulants and foliar fertilisers on fruit quality in A. chinensis var. chinensis in Italy
- Author
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Donati, I., primary, Onofrietti, C., additional, Raule, N., additional, Cellini, A., additional, Pellegrini, D., additional, Spinelli, F., additional, and Xylogiannis, E., additional
- Published
- 2023
- Full Text
- View/download PDF
4. Screening of microbial biocoenosis of Actinidia chinensis for the isolation of candidate biological control agents against Pseudomonas syringae pv. actinidiae
- Author
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Donati, I., primary, Buriani, G., additional, Cellini, A., additional, Raule, N., additional, and Spinelli, F., additional
- Published
- 2018
- Full Text
- View/download PDF
5. Role of mitochondrial DNA in longevity, aging and age-related diseases in humans: a reappraisal
- Author
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Sevini F, Santoro A, Raule N, Francesco Lescai, Franceschi C, Sevini, F, Santoro, A, Raule, N, Lescai, F, and Franceschi, C.
- Subjects
Aging ,Alzheimer Disease ,mitochondrial DNA, aging, longevity, mtDNA mutations, Alzheimer's disease ,Longevity ,Mutation ,Animals ,Humans ,Alzheimer Disease, genetics ,Longevity, genetics ,DNA, Mitochondrial ,Aging, genetics ,DNA, Mitochondrial, genetics - Abstract
The genetic variability of H. sapiens mitochondrial DNA (mtDNA) can be either germ-line inherited or somatically acquired, and its effect on aging and longevity as well as on the pathogenesis of complex age-related diseases is a hot topic. Here we illustrate the complexity of such studies, related to the large genetic variability of mtDNA in different populations and the fact that the rate of the aging process is different in different cells, tissues and organs. As far as concern Alzheimer's disease, the accumulation of somatic mutations in several tissues have been investigated, as well as the inherited mtDNA variability. However, the issue is still controversial and further studies are needed to clarify the role of mtDNA variants in Alzheimer's disease. This review is aimed to summarize the most recent advances in this field. By high throughput mtDNA sequencing and the study of large cohorts of ethnically homogeneous subjects/patients, it is now possible to perform high dimensionality studies in order to clarify the genetic associations among several inherited mtDNA variants and longevity or age-associated diseases in humans.
- Published
- 2009
6. Screening of microbial biocoenosis of Actinidia chinensis for the isolation of candidate biological control agents against Pseudomonas syringae pv. actinidiae
- Author
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N. Raule, Antonio Cellini, Francesco Spinelli, Giampaolo Buriani, Irene Donati, Donati, I., Buriani, G., Cellini, A., Raule, N., and Spinelli, F.
- Subjects
0106 biological sciences ,0301 basic medicine ,Actinidia deliciosa ,Actinidia chinensis ,biology ,Biological pest control ,Pseudomonas fluorescens ,Horticulture ,Pesticide ,biology.organism_classification ,01 natural sciences ,Microbiology ,03 medical and health sciences ,030104 developmental biology ,Antibiotic resistance ,Pseudomonas syringae ,bacterial canker, Psa, kiwifruit, biocontrol ,Phytotoxicity ,010606 plant biology & botany - Abstract
The present study aimed to isolate and characterize candidate biological control agents against Pseudomonas syringae pv. actinidiae (Psa), the causal agent of kiwifruit bacterial canker. Biological control represents a promising strategy to reduce or complement the use of chemical pesticides. In the case of Psa, the common preventive strategies rely on the use of copper formulations. However, the use of copper has some severe limitations because of environmental concerns, phytotoxicity and the possible development of bacterial resistance. The use of copper is particularly hazardous during blooming, which is a phenological phase with a high risk of Psa infection. Therefore, the use of a biological control agent, especially selected to be active in this phenological phase, is an interesting control alternative. Bacterial biocoenosis, naturally present on flowers, was screened to identify species able to effectively reduce infection at blooming. Flowers from both Actinidia deliciosa and Actinidia chinensis were sampled in healthy and infected orchards, and culturable microorganisms were isolated and tested against Psa both in vitro and in planta. Among the 78 isolates, only two, belonging to Pseudomonas fluorescens, were able to inhibit Psa growth in vitro and to reduce disease incidence in planta. Further experiments will be performed in order to confirm these preliminary results and to optimize the use of candidate biocontrol agents under real conditions.
- Published
- 2018
7. The impact of mitochondrial DNA on human lifespan: A view from studies on centenarians
- Author
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Catia Lanzarini, Aurelia Santoro, Nicola Raule, Federica Sevini, Stefano Salvioli, Claudio Franceschi, Daniela Monti, Giuseppina Rose, Stella Lukas, Giovanna De Benedictis, Giuseppe Passarino, Miriam Capri, Salvioli S., Capri M., Santoro A., Raule N., Sevini F., Lukas S., Lanzarini C., Monti D., Passarino G., Rose G., De Benedictis G., and Franceschi C.
- Subjects
Aged, 80 and over ,Genetics ,Mitochondrial DNA ,Mutation ,Models, Genetic ,Somatic cell ,media_common.quotation_subject ,Longevity ,General Medicine ,Biology ,medicine.disease_cause ,DNA, Mitochondrial ,Applied Microbiology and Biotechnology ,Heteroplasmy ,Mtdna mutations ,Human longevity ,medicine ,Humans ,Molecular Medicine ,Genetic variability ,media_common - Abstract
The role of inherited and somatic mutations of mitochondrial DNA (mtDNA) in aging and longevity is complex and highly controversial, owing to its peculiar genetics, including the phenomenon of heteroplasmy. Most of the data on mtDNA and longevity have been obtained on humans and particularly on centenarians, i. e., people who escaped or delayed the major age-related pathologies and reached the extreme limit of human lifespan. In this review we summarize the most recent advances in this field that suggest a consistent role in human longevity of both germ-line inherited and somatically acquired mutations. The particular case of the association with longevity of the somatic C150T mutation is extensively discussed, challenging the tenet that mtDNA mutations are basically detrimental. We also stress several limitations of our present knowledge, regarding the difficulty in extrapolating to humans the results obtained in animal models, owing to a variety of biological differences, including the very limited genetic variability of mtDNA in the strains used in laboratory experiments. The use of high-throughput technologies and the extensive analysis, possibly at the single cell level, of different tissues and cell types derived from the same individual will help in disentangling the complexity of mtDNA in aging and longevity.
- Published
- 2008
8. Association studies on human mitochondrial DNA: Methodological aspects and results in the most common age-related diseases
- Author
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Aurelia Santoro, Claudio Franceschi, Nicola Raule, Federica Sevini, Serena Altilia, Raule N., Sevini F., Santoro A., Altilia S., and Franceschi C.
- Subjects
DNA Replication ,Aging ,Non-Mendelian inheritance ,Mitochondrial DNA ,Mitochondrial Diseases ,Lineage (genetic) ,Longevity ,Population ,Biology ,DNA, Mitochondrial ,Human mitochondrial genetics ,Haplogroup ,Alzheimer Disease ,Neoplasms ,Humans ,Point Mutation ,education ,Molecular Biology ,Genetic association ,Aged, 80 and over ,Genetics ,education.field_of_study ,Polymorphism, Genetic ,Parkinson Disease ,Cell Biology ,Genetics, Population ,Diabetes Mellitus, Type 2 ,Haplotypes ,Cardiovascular Diseases ,Evolutionary biology ,Mutation ,Molecular Medicine ,Energy Metabolism ,Human mitochondrial DNA haplogroup - Abstract
Mitochondrial DNA (mtDNA) follows direct maternal inheritance and, as such, can be used in phylogenetic studies to determine a human lineage tree. The presence of common polymorphisms allows a classification of mtDNA in haplogroups and sub-haplogroups, according to the branch they belong to. Thanks to the rapidly growing number of mtDNA sequences available, this classification is being corrected and redefined to be more accurate. In parallel with this process, several studies are trying to identify an association between common mtDNA polymorphisms and common complex traits, as hypothesized by the common disease-common variant theory. Here we review the associations already reported with the main age-related complex diseases and we identify the critical points (sample size, size of the recruiting area, careful matching between cases and controls regarding geographical origin and ethnicity, data quality checking) to be taken in account in planning such studies. On the whole, this research area is opening a new perspective as an important component of "mitochondrial medicine", capable of identifying new molecular targets for the diagnosis, prevention and treatment of common complex diseases.
- Published
- 2007
9. Mitochondrial DNA involvement in human longevity
- Author
-
Stefano Salvioli, Federica Sevini, Giuseppina Rose, Claudio Franceschi, Giuseppe Passarino, Miriam Capri, Daniela Monti, Giovanna De Benedictis, Aurelia Santoro, Silvana Valensin, Nicola Raule, Dina Bellizzi, Santoro A., Salvioli S., Raule N., Capri M., Sevini F., Monti D., Bellizzi D., Passarino G., Rose G., De Benedictis G., and Franceschi C.
- Subjects
Mitochondrial DNA ,Mitochondrial Diseases ,Nuclear gene ,DNA Repair ,media_common.quotation_subject ,Longevity ,mtDNA haplogroup ,Biophysics ,Biology ,Alzheimer's Disease ,DNA, Mitochondrial ,Biochemistry ,Haplogroup ,Humans ,Centenarian ,media_common ,Cell Nucleus ,Genetics ,Nuclear–mitochondrial interaction ,mtDNA mutation ,Cell Biology ,Phenotype ,Mutation ,Genetics of aging ,Epistasis ,Human mitochondrial DNA haplogroup - Abstract
The main message of this review can be summarized as follows: aging and longevity, as complex traits having a significant genetic component, likely depend on a number of nuclear gene variants interacting with mtDNA variability both inherited and somatic. We reviewed the data available in the literature with particular attention to human longevity, and argued that what we hypothesize for aging and longevity could have a more general relevance and be extended to other age-related complex traits such as Alzheimer's and Parkinson's diseases. The genetics which emerges for complex traits, including aging and longevity, is thus even more complicated than previously thought, as epistatic interactions between nuclear gene polymorphisms and mtDNA variability (both somatic and inherited) as well as between mtDNA somatic mutations (tissue specific) and mtDNA inherited variants (haplogroups and sub-haplogroups) must be considered as additional players capable of explaining a part of the aging and longevity phenotype. To test this hypothesis is one of the main challenge in the genetics of aging and longevity in the next future.
- Full Text
- View/download PDF
10. The co-occurrence of mtDNA mutations on different oxidative phosphorylation subunits, not detected by haplogroup analysis, affects human longevity and is population specific.
- Author
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Raule N, Sevini F, Li S, Barbieri A, Tallaro F, Lomartire L, Vianello D, Montesanto A, Moilanen JS, Bezrukov V, Blanché H, Hervonen A, Christensen K, Deiana L, Gonos ES, Kirkwood TB, Kristensen P, Leon A, Pelicci PG, Poulain M, Rea IM, Remacle J, Robine JM, Schreiber S, Sikora E, Eline Slagboom P, Spazzafumo L, Antonietta Stazi M, Toussaint O, Vaupel JW, Rose G, Majamaa K, Perola M, Johnson TE, Bolund L, Yang H, Passarino G, and Franceschi C
- Subjects
- Aged, 80 and over, Female, Humans, Male, Mutation, DNA, Mitochondrial genetics, Longevity genetics, Oxidative Phosphorylation
- Abstract
To re-examine the correlation between mtDNA variability and longevity, we examined mtDNAs from samples obtained from over 2200 ultranonagenarians (and an equal number of controls) collected within the framework of the GEHA EU project. The samples were categorized by high-resolution classification, while about 1300 mtDNA molecules (650 ultranonagenarians and an equal number of controls) were completely sequenced. Sequences, unlike standard haplogroup analysis, made possible to evaluate for the first time the cumulative effects of specific, concomitant mtDNA mutations, including those that per se have a low, or very low, impact. In particular, the analysis of the mutations occurring in different OXPHOS complex showed a complex scenario with a different mutation burden in 90+ subjects with respect to controls. These findings suggested that mutations in subunits of the OXPHOS complex I had a beneficial effect on longevity, while the simultaneous presence of mutations in complex I and III (which also occurs in J subhaplogroups involved in LHON) and in complex I and V seemed to be detrimental, likely explaining previous contradictory results. On the whole, our study, which goes beyond haplogroup analysis, suggests that mitochondrial DNA variation does affect human longevity, but its effect is heavily influenced by the interaction between mutations concomitantly occurring on different mtDNA genes., (© 2013 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd.)
- Published
- 2014
- Full Text
- View/download PDF
11. Decreased reactive oxygen species production in cells with mitochondrial haplogroups associated with longevity.
- Author
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Chen A, Raule N, Chomyn A, and Attardi G
- Subjects
- Cell Line, Cell Proliferation, DNA, Mitochondrial genetics, Electron Transport Complex IV genetics, Electron Transport Complex IV metabolism, Fibroblasts cytology, Fibroblasts metabolism, Humans, Hybrid Cells cytology, Hybrid Cells metabolism, Membrane Potential, Mitochondrial genetics, Mitochondria physiology, Mutation, Oxygen Consumption genetics, Polymorphism, Genetic, Haplotypes, Longevity genetics, Mitochondria genetics, Mitochondria metabolism, Reactive Oxygen Species metabolism
- Abstract
Mitochondrial DNA (mtDNA) is highly polymorphic, and its variations in humans may contribute to individual differences in function. Zhang and colleagues found a strikingly higher frequency of a C150T transition in the D-loop of mtDNA from centenarians and twins of an Italian population, and also demonstrated that this base substitution causes a remodeling of the mtDNA 151 replication origin in human leukocytes and fibroblasts [1]. The C150T transition is a polymorphism associated with several haplogroups. To determine whether haplogroups that carry the C150T transition display any phenotype that may be advantageous for longevity, we analyzed cybrids carrying or not the C150T transition. These cybrids were obtained by fusing cytoplasts derived from human fibroblasts with human mtDNA-less cells (ρ(0) cells). We chose for cybrid construction and analysis haplogroup-matched pairs of fibroblast strains containing or not the C150T transition. In particular, we used, as one pair of mtDNA donors, a fibroblast strain of the U3a haplogroup, carrying the C150T transition and a strain of the U-K2 haplogroup, without the C150T transition, and as another pair, fibroblasts of the J2b haplogroup, carrying the C150T transition and of the J1c haplogroup, without the C150T transition. We have found no association of respiratory capacity, mtDNA level, mitochondrial gene expression level, or growth rate with the presence of the C150T transition. However, we have found that the cybrids with haplogroups that include the C150T transition have in common a lower reactive oxygen species (ROS) production rate than the haplogroup-matched cybrids without that transition. Thus, the lower ROS production rate may be a factor in the increased longevity associated with the U and the J2 haplogroups. Of further interest, we found that cybrids with the U3a haplogroup exhibited a higher respiration rate than the other cybrids examined.
- Published
- 2012
- Full Text
- View/download PDF
12. The impact of mitochondrial DNA on human lifespan: a view from studies on centenarians.
- Author
-
Salvioli S, Capri M, Santoro A, Raule N, Sevini F, Lukas S, Lanzarini C, Monti D, Passarino G, Rose G, De Benedictis G, and Franceschi C
- Subjects
- Aged, 80 and over, Humans, DNA, Mitochondrial genetics, Longevity genetics, Models, Genetic, Mutation genetics
- Abstract
The role of inherited and somatic mutations of mitochondrial DNA (mtDNA) in aging and longevity is complex and highly controversial, owing to its peculiar genetics, including the phenomenon of heteroplasmy. Most of the data on mtDNA and longevity have been obtained on humans and particularly on centenarians, i. e., people who escaped or delayed the major age-related pathologies and reached the extreme limit of human lifespan. In this review we summarize the most recent advances in this field that suggest a consistent role in human longevity of both germ-line inherited and somatically acquired mutations. The particular case of the association with longevity of the somatic C150T mutation is extensively discussed, challenging the tenet that mtDNA mutations are basically detrimental. We also stress several limitations of our present knowledge, regarding the difficulty in extrapolating to humans the results obtained in animal models, owing to a variety of biological differences, including the very limited genetic variability of mtDNA in the strains used in laboratory experiments. The use of high-throughput technologies and the extensive analysis, possibly at the single cell level, of different tissues and cell types derived from the same individual will help in disentangling the complexity of mtDNA in aging and longevity.
- Published
- 2008
- Full Text
- View/download PDF
13. Role of mitochondrial DNA in longevity, aging and age-related diseases in humans: a reappraisal.
- Author
-
Sevini F, Santoro A, Raule N, Lescai F, and Franceschi C
- Subjects
- Alzheimer Disease genetics, Animals, Humans, Mutation, Aging genetics, DNA, Mitochondrial genetics, Longevity genetics
- Abstract
The genetic variability of H. sapiens mitochondrial DNA (mtDNA) can be either germ-line inherited or somatically acquired, and its effect on aging and longevity as well as on the pathogenesis of complex age-related diseases is a hot topic. Here we illustrate the complexity of such studies, related to the large genetic variability of mtDNA in different populations and the fact that the rate of the aging process is different in different cells, tissues and organs. As far as concern Alzheimer's disease, the accumulation of somatic mutations in several tissues have been investigated, as well as the inherited mtDNA variability. However, the issue is still controversial and further studies are needed to clarify the role of mtDNA variants in Alzheimer's disease. This review is aimed to summarize the most recent advances in this field. By high throughput mtDNA sequencing and the study of large cohorts of ethnically homogeneous subjects/patients, it is now possible to perform high dimensionality studies in order to clarify the genetic associations among several inherited mtDNA variants and longevity or age-associated diseases in humans.
- Published
- 2007
14. Association studies on human mitochondrial DNA: methodological aspects and results in the most common age-related diseases.
- Author
-
Raule N, Sevini F, Santoro A, Altilia S, and Franceschi C
- Subjects
- Aged, 80 and over, Aging genetics, Alzheimer Disease genetics, Cardiovascular Diseases genetics, DNA Replication, Diabetes Mellitus, Type 2 genetics, Energy Metabolism, Genetics, Population, Haplotypes genetics, Humans, Longevity genetics, Mitochondrial Diseases genetics, Mutation, Neoplasms genetics, Parkinson Disease genetics, Point Mutation, Polymorphism, Genetic, DNA, Mitochondrial physiology
- Abstract
Mitochondrial DNA (mtDNA) follows direct maternal inheritance and, as such, can be used in phylogenetic studies to determine a human lineage tree. The presence of common polymorphisms allows a classification of mtDNA in haplogroups and sub-haplogroups, according to the branch they belong to. Thanks to the rapidly growing number of mtDNA sequences available, this classification is being corrected and redefined to be more accurate. In parallel with this process, several studies are trying to identify an association between common mtDNA polymorphisms and common complex traits, as hypothesized by the common disease-common variant theory. Here we review the associations already reported with the main age-related complex diseases and we identify the critical points (sample size, size of the recruiting area, careful matching between cases and controls regarding geographical origin and ethnicity, data quality checking) to be taken in account in planning such studies. On the whole, this research area is opening a new perspective as an important component of "mitochondrial medicine", capable of identifying new molecular targets for the diagnosis, prevention and treatment of common complex diseases.
- Published
- 2007
- Full Text
- View/download PDF
15. Mitochondrial DNA involvement in human longevity.
- Author
-
Santoro A, Salvioli S, Raule N, Capri M, Sevini F, Valensin S, Monti D, Bellizzi D, Passarino G, Rose G, De Benedictis G, and Franceschi C
- Subjects
- Cell Nucleus metabolism, DNA Repair genetics, Humans, Mitochondrial Diseases genetics, Mutation genetics, DNA, Mitochondrial genetics, Longevity genetics
- Abstract
The main message of this review can be summarized as follows: aging and longevity, as complex traits having a significant genetic component, likely depend on a number of nuclear gene variants interacting with mtDNA variability both inherited and somatic. We reviewed the data available in the literature with particular attention to human longevity, and argued that what we hypothesize for aging and longevity could have a more general relevance and be extended to other age-related complex traits such as Alzheimer's and Parkinson's diseases. The genetics which emerges for complex traits, including aging and longevity, is thus even more complicated than previously thought, as epistatic interactions between nuclear gene polymorphisms and mtDNA variability (both somatic and inherited) as well as between mtDNA somatic mutations (tissue specific) and mtDNA inherited variants (haplogroups and sub-haplogroups) must be considered as additional players capable of explaining a part of the aging and longevity phenotype. To test this hypothesis is one of the main challenge in the genetics of aging and longevity in the next future.
- Published
- 2006
- Full Text
- View/download PDF
16. Discovery of a major D-loop replication origin reveals two modes of human mtDNA synthesis.
- Author
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Fish J, Raule N, and Attardi G
- Subjects
- Cell Line, Cell Line, Tumor, DNA Primers metabolism, DNA Probes, DNA, Mitochondrial chemistry, DNA, Mitochondrial metabolism, DNA-Directed DNA Polymerase metabolism, Electrophoresis, Polyacrylamide Gel, Ethidium pharmacology, HeLa Cells, Humans, Lymphocytes metabolism, Nucleic Acid Conformation, Polymerase Chain Reaction, DNA Replication, DNA, Mitochondrial biosynthesis, Replication Origin
- Abstract
Mammalian mitochondrial DNA (mtDNA) replication has long been considered to occur by asymmetric synthesis of the two strands, starting at the multiple origins of the strand-displacement loop (D-loop). We report the discovery of a major replication origin at position 57 in the D-loop of several human cell lines (HeLa, A549, and 143B.TK-) and immortalized lymphocytes. The nascent chains starting at this origin, in contrast to those initiated at the previously described origins, do not terminate prematurely at the 3' end of the D-loop but proceed well beyond this control point, behaving as "true" replicating strands. This origin is mainly responsible for mtDNA maintenance under steady-state conditions, whereas mtDNA synthesis from the formerly identified D-loop origins may be more important for recovery after mtDNA depletion and for accelerating mtDNA replication in response to physiological demands.
- Published
- 2004
- Full Text
- View/download PDF
17. Increased transcription of mitochondrial genes for Complex I in human platelets during ageing.
- Author
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Merlo Pich M, Raule N, Catani L, Fagioli ME, Faenza I, Cocco L, and Lenaz G
- Subjects
- Adult, Aged, Aged, 80 and over, Blood Platelets physiology, Electron Transport Complex I genetics, Electron Transport Complex IV genetics, Electron Transport Complex IV metabolism, Humans, NADH Dehydrogenase genetics, NADH Dehydrogenase metabolism, Oxidative Phosphorylation, RNA, Messenger metabolism, Reverse Transcriptase Polymerase Chain Reaction, Aging, Blood Platelets enzymology, DNA, Mitochondrial genetics, Electron Transport Complex I metabolism, Transcription, Genetic
- Abstract
We studied the effect of ageing on the mRNA levels of mitochondria-encoded polypeptides in human platelets. We used quantitative real-time reverse transcriptase-polymerase chain reaction (RT-PCR) to investigate the expression of selected cytochrome c oxidase (COX) genes (subunits I and III) and Complex I genes (subunits reduced nicotinamide adenine dinucleotide (NADH) dehydrogenase (ND)1 and (ND)5 in platelets from young and aged healthy subjects. Northern blot analysis confirmed the PCR results. COX I expression is higher than that of COX III in both young and aged platelets. A significant increase of transcripts for Complex I was found during ageing. On the contrary, the mRNA levels of the two COX subunits did not significantly vary during ageing.
- Published
- 2004
- Full Text
- View/download PDF
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