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Observations in the lowest MWA band between $75-100$ MHz have the potential to constrain the distribution of neutral hydrogen in the intergalactic medium at redshift $\sim 13-17$. Using 15 hours of MWA data, we analyse systematics in this band such as radio-frequency interference (RFI), ionospheric and wide field effects. By updating the position of point sources, we mitigate the direction independent calibration error due to ionospheric offsets. Our calibration strategy is optimized for the lowest frequency bands by reducing the number of direction dependent calibrators and taking into account radio sources within a wider field of view. We remove data polluted by systematics based on the RFI occupancy and ionospheric conditions, finally selecting 5.5 hours of the cleanest data. Using these data, we obtain two sigma upper limits on the 21 cm power spectrum in the range of $0.1\lessapprox k \lessapprox 1 ~\rm ~h~Mpc^{-1}$ and at $z$=14.2, 15.2 and 16.5, with the lowest limit being $6.3\times 10^6 ~\rm mK^2$ at $\rm k=0.14 \rm ~h~Mpc^{-1}$ and at $z=15.2$ with a possibility of a few \% of signal loss due to direction independent calibration., Comment: 17 pages, 18 figures, accepted to MNRAS

Current attempts to measure the 21cm Power Spectrum of neutral hydrogen during the Epoch of Reionization are limited by systematics which produce measured upper limits above both the thermal noise and the expected cosmological signal. These systematics arise from a combination of observational, instrumental, and analysis effects. In order to further understand and mitigate these effects, it is instructive to explore different aspects of existing datasets. One such aspect is the choice of observing field. To date, MWA EoR observations have largely focused on the EoR0 field. In this work, we present a new detailed analysis of the EoR1 field. The EoR1 field is one of the coldest regions of the Southern radio sky, but contains the very bright radio galaxy Fornax-A. The presence of this bright extended source in the primary beam of the interferometer makes the calibration and analysis of EoR1 particularly challenging. We demonstrate the effectiveness of a recently developed shapelet model of Fornax-A in improving the results from this field. We also describe and apply a series of data quality metrics which identify and remove systematically contaminated data. With substantially improved source models, upgraded analysis algorithms and enhanced data quality metrics, we determine EoR power spectrum upper limits based on analysis of the best $\sim$14-hours data observed during 2015 and 2014 at redshifts 6.5, 6.8 and 7.1, with the lowest $2\sigma$ upper limit at z=6.5 of $\Delta^2 \leq (73.78 ~\mathrm{mK)^2}$ at $k=0.13~\mathrm{h~ Mpc^{-1}}$, improving on previous EoR1 measurement results., Comment: 18 pages, 17 figures, Accepted for publication in MNRAS

Precise instrumental calibration is of crucial importance to 21-cm cosmology experiments. The Murchison Widefield Array's (MWA) Phase II compact configuration offers us opportunities for both redundant calibration and sky-based calibration algorithms; using the two in tandem is a potential approach to mitigate calibration errors caused by inaccurate sky models. The MWA Epoch of Reionization (EoR) experiment targets three patches of the sky (dubbed EoR0, EoR1, and EoR2) with deep observations. Previous work in \cite{Li_2018} and \cite{Wenyang_2019} studied the effect of tandem calibration on the EoR0 field and found that it yielded no significant improvement in the power spectrum over sky-based calibration alone. In this work, we apply similar techniques to the EoR1 field and find a distinct result: the improvements in the power spectrum from tandem calibration are significant. To understand this result, we analyze both the calibration solutions themselves and the effects on the power spectrum over three nights of EoR1 observations. We conclude that the presence of the bright radio galaxy Fornax A in EoR1 degrades the performance of sky-based calibration, which in turn enables redundant calibration to have a larger impact. These results suggest that redundant calibration can indeed mitigate some level of model-incompleteness error., Comment: 20 pages, 11 figures, accepted for publication in PASA

The latest generation of low frequency radio interferometers, e.g. LOFAR, MWA, PAPER, has been pushing down the detection limits on the hydrogen signal from the Epoch of Reionisation. However, due to the challenges posed by foregrounds and instrumental systematics the signal has eluded detection thus far. To overcome these challenges we require a detailed understanding of the calibration of these relatively new telescopes. This led to a renewed interest in redundant calibration. Classical calibration schemes depend on sky models based on limited knowledge of the low frequency sky. Redundant calibration, however, allows us to escape our ignorance as it is sky model independent. We will review the field of redundant calibration, and present work we have undertaken to understand the limitations of this calibration method.

Detecting a signal from the Epoch of Reionisation (EoR) requires an exquisite understanding of galactic and extra-galactic foregrounds, low frequency radio instruments, instrumental calibration, and data analysis pipelines. In this work we build upon existing work that aims to understand the impact of calibration errors on 21-cm power spectrum (PS) measurements. It is well established that calibration errors have the potential to inhibit EoR detections by introducing additional spectral features that mimic the structure of EoR signals. We present a straightforward way to estimate the impact of a wide variety of modelling residuals in EoR PS estimation. We apply this framework to the specific case of broken dipoles in Murchison Widefield Array (MWA) to understand its effect and estimate its impact on PS estimation. Combining an estimate of the percentage of MWA tiles that have at least one broken dipole (15%-40%) with an analytic description of beam errors induced by such dipoles, we compute the residuals of the foregrounds after calibration and source subtraction. We find that that incorrect beam modelling introduces bias in the 2D-PS on the order of $\sim 10^3\, \mathrm{mK}^2 \,h^{-3}\, \mathrm{Mpc}^{3}$. Although this is three orders of magnitude lower than current lowest limits, it is two orders of magnitude higher than the expected signal. Determining the accuracy of both current beam models and direction dependent calibration pipelines is therefore crucial in our search for an EoR signal., 14 pages, 8 figures. Accepted for publication in MNRAS December 2019. Erratum submitted on 20 February 2020

We explore methods for robust estimation of the 21 cm signal from the Epoch of Reionisation (EoR). A Kernel Density Estimator (KDE) is introduced for measuring the spatial temperature fluctuation power spectrum from the EoR. The KDE estimates the underlying probability distribution function of fluctuations as a function of spatial scale, and contains different systematic biases and errors to the typical approach to estimating the fluctuation power spectrum. Extraction of histograms of visibilities allows moments analysis to be used to discriminate foregrounds from 21 cm signal and thermal noise. We use the information available in the histograms, along with the statistical dis-similarity of foregrounds from two independent observing fields, to robustly separate foregrounds from cosmological signal, while making no assumptions about the Gaussianity of the signal. Using two independent observing fields to robustly discriminate signal from foregrounds is crucial for the analysis presented in this paper. We apply the techniques to 13 hours of Murchison Widefield Array (MWA) EoR data over two observing fields. We compare the output to that obtained with a comparative power spectrum estimation method, and demonstrate the reduced foreground contamination using this approach. Using the second moment obtained directly from the KDE distribution functions yields a factor of 2-3 improvement in power for k < 0.3hMpc^{-1} compared with a matched delay space power estimator, while weighting data by additional statistics does not offer significant improvement beyond that available for thermal noise-only weights., 19 pages, 18 figures, accepted for publication in MNRAS

We apply two methods to estimate the 21~cm bispectrum from data taken within the Epoch of Reionisation (EoR) project of the Murchison Widefield Array (MWA). Using data acquired with the Phase II compact array allows a direct bispectrum estimate to be undertaken on the multiple redundantly-spaced triangles of antenna tiles, as well as an estimate based on data gridded to the $uv$-plane. The direct and gridded bispectrum estimators are applied to 21 hours of high-band (167--197~MHz; $z$=6.2--7.5) data from the 2016 and 2017 observing seasons. Analytic predictions for the bispectrum bias and variance for point source foregrounds are derived. We compare the output of these approaches, the foreground contribution to the signal, and future prospects for measuring the bispectra with redundant and non-redundant arrays. We find that some triangle configurations yield bispectrum estimates that are consistent with the expected noise level after 10 hours, while equilateral configurations are strongly foreground-dominated. Careful choice of triangle configurations may be made to reduce foreground bias that hinders power spectrum estimators, and the 21~cm bispectrum may be accessible in less time than the 21~cm power spectrum for some wave modes, with detections in hundreds of hours., Comment: 19 pages, 10 figures, accepted for publication in PASA

The Murchison Widefield Array (MWA) is an open access telescope dedicated to studying the low frequency (80$-$300 MHz) southern sky. Since beginning operations in mid 2013, the MWA has opened a new observational window in the southern hemisphere enabling many science areas. The driving science objectives of the original design were to observe 21\,cm radiation from the Epoch of Reionisation (EoR), explore the radio time domain, perform Galactic and extragalactic surveys, and monitor solar, heliospheric, and ionospheric phenomena. All together 60$+$ programs recorded 20,000 hours producing 146 papers to date. In 2016 the telescope underwent a major upgrade resulting in alternating compact and extended configurations. Other upgrades, including digital back-ends and a rapid-response triggering system, have been developed since the original array was commissioned. In this paper we review the major results from the prior operation of the MWA, and then discuss the new science paths enabled by the improved capabilities. We group these science opportunities by the four original science themes, but also include ideas for directions outside these categories., Comment: 38 pages, 12 figures, accepted for publication in PASA

The compact configuration of Phase II of the Murchison Widefield Array (MWA) consists of both a redundant subarray and pseudo-random baselines, offering unique opportunities to perform sky-model and redundant interferometric calibration. The highly redundant hexagonal cores give improved power spectrum sensitivity. In this paper, we present the analysis of nearly 40 hours of data targeting one of the MWA's EoR fields observed in 2016. We use both improved analysis techniques presented in Barry et al. (2019) as well as several additional techniques developed for this work, including data quality control methods and interferometric calibration approaches. We show the EoR power spectrum limits at redshift 6.5, 6.8 and 7.1 based on our deep analysis on this 40-hour data set. These limits span a range in $k$ space of $0.18$ $h$ $\mathrm{Mpc^{-1}}$ $

Interferometric arrays seeking to measure the 21 cm signal from the Epoch of Reionization must contend with overwhelmingly bright emission from foreground sources. Accurate recovery of the 21 cm signal will require precise calibration of the array, and several new avenues for calibration have been pursued in recent years, including methods using redundancy in the antenna configuration. The newly upgraded Phase II of Murchison Widefield Array (MWA) is the first interferometer that has large numbers of redundant baselines while retaining good instantaneous UV-coverage. This array therefore provides a unique opportunity to compare redundant calibration with sky-model based algorithms. In this paper, we present the first results from comparing both calibration approaches with MWA Phase II observations. For redundant calibration, we use the package OMNICAL, and produce sky-based calibration solutions with the analysis package Fast Holographic Deconvolution (FHD). There are three principal results. (1) We report the success of OMNICAL on observations of ORBComm satellites, showing substantial agreement between redundant visibility measurements after calibration. (2) We directly compare OMNICAL calibration solutions with those from FHD, and demonstrate these two different calibration schemes give extremely similar results. (3) We explore improved calibration by combining OMNICAL and FHD. We evaluate these combined methods using power spectrum techniques developed for EoR analysis and find evidence for marginal improvements mitigating artifacts in the power spectrum. These results are likely limited by signal-to-noise in the six hours of data used, but suggest future directions for combining these two calibration schemes., 20 pages, 11 figures. Accepted to ApJ

Precise instrument calibration is critical to the success of 21 cm cosmology experiments. Unmitigated errors in calibration contaminate the Epoch of Reionization (EoR) signal, precluding a detection. Barry et al. characterized one class of inherent errors that emerge from calibrating to an incomplete sky model; however, it has been unclear if errors in the sky model affect the calibration of redundant arrays. In this paper, we show that redundant calibration is vulnerable to errors from sky model incompleteness even in the limit of perfect antenna positioning and identical beams. These errors are at a level that can overwhelm the EoR signal and prevent a detection in crucial power spectrum modes. Finally, we suggest error mitigation strategies with implications for the Hydrogen Epoch of Reionization Array and the Square Kilometre Array.

The advent of a new generation of low frequency interferometers has opened a direct window into the Epoch of Reionisation (EoR). However, key to a detection of the faint 21-cm signal, and reaching the sensitivity limits of these arrays, is a detailed understanding of the instruments and their calibration. In this work we use simulations to investigate the bias and uncertainty of redundancy based calibration. Specifically, we study the influence of the flux distribution of the radio sky and the impact of antenna position offsets on the complex calibration solutions. We find that the position offsets introduce a bias into the phase component of the calibration solutions. This phase bias increases with the distance between bright radio sources and the pointing center, and with the flux density of these sources. This is potentially problematic for redundant calibration on MWA observations of EoR fields 1 and 2. EoR field 0, however, lacks such sources. We also compared the simulations with theoretical estimates for the bias and uncertainty in sky model based calibration on incomplete sky models for the redundant antenna tiles in the MWA. Our results indicate that redundant calibration outperforms sky based calibration due to the high positional precision of the MWA antenna tiles., Comment: 15 pages, 10 figures, Accepted for publication in the Astronomical Journal

The Square Kilometre Array (SKA) will have a low frequency component (SKA-low) which has as one of its main science goals the study of the redshifted 21cm line from the earliest phases of star and galaxy formation in the Universe. This 21cm signal provides a new and unique window on both the formation of the first stars and accreting black holes and the later period of substantial ionization of the intergalactic medium. The signal will teach us fundamental new things about the earliest phases of structure formation, cosmology and even has the potential to lead to the discovery of new physical phenomena. Here we present a white paper with an overview of the science questions that SKA-low can address, how we plan to tackle these questions and what this implies for the basic design of the telescope., Comment: Accepted for publication in Experimental Astronomy, reformatted to 57 pages, some updated and improved figures and minor changes and updates to the text

Gas-forming infections of the genitourinary tract may manifest as life-threatening conditions, often requiring aggressive medical and surgical management. Accurate interpretation of the radiologic studies is essential for early and accurate diagnosis of gas within the renal parenchyma or collecting system, bladder, uterus, and scrotum. Three distinct entities are associated with renal or perirenal gas: emphysematous pyelonephritis, emphysematous pyelitis, and gas-forming perirenal abscess. Gas in the bladder may occur secondary to emphysematous cystitis or a vesicoenteric fistula and must be differentiated from air introduced by means of instrumentation. Uterine gas usually indicates an underlying infection or a neoplasm. Gas in the scrotum is most commonly due to an infectious process or bowel herniation into the scrotal sac. Before institution of a specific therapeutic regimen, an effort should be made to establish the exact location of gas in the genitourinary tract. Plain radiography, including tomography, and ultrasonography are useful screening modalities. Although in some cases urography, barium enema studies, and other contrast material-enhanced studies enable a diagnosis to be made, in many patients computed tomography is the definitive diagnostic technique.

Uterine leiomyomas, commonly known as fibroids, are one of the most common pelvic tumors found in women. Ultrasonography is the primary modality for evaluating leiomyomas. However, frequently these tumors are not accompanied by symptoms, and they are found incidentally during computed tomographic (CT) examinations performed for other indications. Because leiomyomas may first be noted on CT scans, radiologists should become familiar with their characteristic appearance. The authors describe the CT findings of uterine leiomyomas and their secondary changes, including cystic degeneration, calcification, infection, necrosis, fatty degeneration, and sarcomatous degeneration.

Neonatal renal vein thrombosis (RVT) is a well-described entity which is traditionally associated with a variety of perinatal stresses. Prenatal RVT is much less commonly detected. We describe a case in which a screening obstetrical ultrasonogram detected a fetal renal abnormality which was incorrectly interpreted as a suspected neoplasm of the fetal kidney. Ultrasonographic examinations during the first week of life confirmed the diagnosis of RVT, and both gray-scale and Doppler techniques were used to follow the resolution of the thrombosis and the fate of the kidney.