35 results on '"Quast, B"'
Search Results
2. Ultrastructure and significance of the transitory nephridia in Erpobdella octoculata (Hirudinea, Annelida)
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Quast, B. and Bartolomaeus, Thomas
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- 2001
- Full Text
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3. Zwischen Mythos und Philosophie. Orpheus’ Entscheidung
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Wagner-Egelhaaf M., Quast B., Basu H., Musio, Alessio, Alessio Musio (ORCID:0000-0001-7462-3903), Wagner-Egelhaaf M., Quast B., Basu H., Musio, Alessio, and Alessio Musio (ORCID:0000-0001-7462-3903)
- Abstract
Der Beitrag widmet sich dem Mythos von Orpheus und Eurydike, der aus einer ungewohnten Perspektive gelesen wird, nämlich aus derjenigen der Entschei- dung in ihrer Beziehung zu dem Thema ›Zeit‹. Zunächst wird geklärt, unter welchen Rahmenbedingungen die Philosophie überhaupt autorisiert ist, über Mythen zu sprechen. Der zweite Teil ist der negativen Bedeutung des Mythos als einer Art vager, die Realität verfremdender intellektueller Konstruktion ge- widmet: Es gibt in der Tat auch inakzeptable Mythen über die Entscheidung, inakzeptabel deshalb, weil sie mit der Erfahrung des Ichs nicht kompatibel sind. Vor diesem Hintergrund wird eine philosophische Prüfung des Mythos von Orpheus und Eurydike vorgenommen.
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- 2019
4. In silico evo-devo: reconstructing stages in the evolution of animal segmentation
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Hogeweg, Paulien, ten Tusscher, Kirsten H. W. J., Davis, GK, Patel, NH, Peel, A, Akam, M, Couso, JP, Budd, GE, Seaver, EC, Minelli, A, Fusco, G, Tautz, D, Jacobs, DK, Hughes, NC, Fitz-Gibbon, ST, Winchell, CJ, Blair, SS, Wanninger, A, Kristof, A, Brinkmann, N, Chipman, AD, Richmond, DL, Oates, AC, Gold, DA, Runnegar, B, Gehling, JG, Rivera, A, Weisblat, D, Williams, T, Blachuta, B, Hegna, TA, Nagy, LM, Balavoine, G, Bénazéraf, B, Pourquié, O, Mayer, G, Kato, C, Quast, B, Chisholm, RH, Landman, KA, Quinn, LM, Nakamoto, A, Hester, SD, Constantinou, SJ, Blaine, WG, Tewksbury, AB, Matei, MT, Williams, TA, Graham, A, Butts, T, Lumsden, A, Kiecker, C, François, P, Hakim, V, Siggia, ED, Fujimoto, K, Ishihara, S, Kaneko, K, Tusscher, KH, Hogeweg, P, Crombach, A, Salazar-Ciudad, I, Newman, SA, Solé, RV, Pankratz, MJ, Jäckle, H, Crampin, EJ, Hackborn, WW, Maini, PK, Harper, JL, Rosen, BR, White, J, Tusscher, KHWJ, Petersen, CP, Reddien, PW, Martin, BL, Kimelman, D, Young, T, Rowland, JE, Ven, C, Bialecka, M, Novoa, A, Carapuco, M, Nes, J, Graaff, W, Duluc, I, Freund, J-N, Beck, F, Mallo, M, Deschamps, J, Meinhardt, H, Kappen, C, Schughart, K, Ruddle, FH, Sub Theoretical Biology, Dep Biologie, and Theoretical Biology and Bioinformatics
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0301 basic medicine ,lcsh:Evolution ,Biology ,Bilaterian evolution ,03 medical and health sciences ,0302 clinical medicine ,Segmentation ,Plant Genetics & Genomics ,lcsh:QH359-425 ,Genetics ,Determinate growth ,Ecology, Evolution, Behavior and Systematics ,Selection (genetic algorithm) ,Evolutionary Biology ,In silico evolution ,Mechanism (biology) ,Posterior signalling ,Research ,Paleontology ,Indeterminate growth ,030104 developmental biology ,Order (biology) ,Evolutionary biology ,Evolutionary developmental biology ,Axis extension ,Developmental biology ,Zoology ,030217 neurology & neurosurgery ,Morphogen ,Developmental Biology - Abstract
Background The evolution of animal segmentation is a major research focus within the field of evolutionary–developmental biology. Most studied segmented animals generate their segments in a repetitive, anterior-to-posterior fashion coordinated with the extension of the body axis from a posterior growth zone. In the current study we ask which selection pressures and ordering of evolutionary events may have contributed to the evolution of this specific segmentation mode. Results To answer this question we extend a previous in silico simulation model of the evolution of segmentation by allowing the tissue growth pattern to freely evolve. We then determine the likelihood of evolving oscillatory sequential segmentation combined with posterior growth under various conditions, such as the presence or absence of a posterior morphogen gradient or selection for determinate growth. We find that posterior growth with sequential segmentation is the predominant outcome of our simulations only if a posterior morphogen gradient is assumed to have already evolved and selection for determinate growth occurs secondarily. Otherwise, an alternative segmentation mechanism dominates, in which divisions occur in large bursts through the entire tissue and all segments are created simultaneously. Conclusions Our study suggests that the ancestry of a posterior signalling centre has played an important role in the evolution of sequential segmentation. In addition, it suggests that determinate growth evolved secondarily, after the evolution of posterior growth. More generally, we demonstrate the potential of evo-devo simulation models that allow us to vary conditions as well as the onset of selection pressures to infer a likely order of evolutionary innovations. Electronic supplementary material The online version of this article (doi:10.1186/s13227-016-0052-8) contains supplementary material, which is available to authorized users.
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- 2016
5. Registerwechsel. Wiedererzählen, bibelepisch (Der Saelden Hort, Die Erlösung, Lutwins Adam und Eva)
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Quast, Bruno, Spreckelmeier, Susanne, Quast, B ( Bruno ), Spreckelmeier, S ( Susanne ), Köbele, Susanne, Quast, Bruno, Spreckelmeier, Susanne, Quast, B ( Bruno ), Spreckelmeier, S ( Susanne ), and Köbele, Susanne
- Abstract
Die Beiträge gehen zum grossen Teil auf das Kolloquium "Inkulturation. Literarische Strategien bibelepischen Schreibens in Mittelalter und Früher Neuzeit" zurück, das vom 19. bis 21. März 2014 in Münster stattfand.
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- 2017
6. Der Einfluß körperlicher Aktivität auf das plasmatische Gerinnungssystem
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Röcker, L., Stiege-Quast, B., Schwandt, H.-J., Quast, J., Franz, Ingomar-Werner, editor, Mellerowicz, Harald, editor, and Noack, Wolfgang, editor
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- 1985
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7. Der Einfluß körperlicher Leistung auf die Antithrombin-III-Aktivität im Plasma
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Röcker, L., Stiege-Quast, B., Schwandt, H.-J., Quast, J., and Jeschke, Dieter, editor
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- 1984
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8. In silico evo-devo: reconstructing stages in the evolution of animal segmentation
- Author
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Sub Theoretical Biology, Dep Biologie, Theoretical Biology and Bioinformatics, Hogeweg, Paulien, ten Tusscher, Kirsten H. W. J., Davis, GK, Patel, NH, Peel, A, Akam, M, Couso, JP, Budd, GE, Seaver, EC, Minelli, A, Fusco, G, Tautz, D, Jacobs, DK, Hughes, NC, Fitz-Gibbon, ST, Winchell, CJ, Blair, SS, Wanninger, A, Kristof, A, Brinkmann, N, Chipman, AD, Richmond, DL, Oates, AC, Gold, DA, Runnegar, B, Gehling, JG, Rivera, A, Weisblat, D, Williams, T, Blachuta, B, Hegna, TA, Nagy, LM, Balavoine, G, Bénazéraf, B, Pourquié, O, Mayer, G, Kato, C, Quast, B, Chisholm, RH, Landman, KA, Quinn, LM, Nakamoto, A, Hester, SD, Constantinou, SJ, Blaine, WG, Tewksbury, AB, Matei, MT, Williams, TA, Graham, A, Butts, T, Lumsden, A, Kiecker, C, François, P, Hakim, V, Siggia, ED, Fujimoto, K, Ishihara, S, Kaneko, K, Tusscher, KH, Hogeweg, P, Crombach, A, Salazar-Ciudad, I, Newman, SA, Solé, RV, Pankratz, MJ, Jäckle, H, Crampin, EJ, Hackborn, WW, Maini, PK, Harper, JL, Rosen, BR, White, J, Tusscher, KHWJ, Petersen, CP, Reddien, PW, Martin, BL, Kimelman, D, Young, T, Rowland, JE, Ven, C, Bialecka, M, Novoa, A, Carapuco, M, Nes, J, Graaff, W, Duluc, I, Freund, J-N, Beck, F, Mallo, M, Deschamps, J, Meinhardt, H, Kappen, C, Schughart, K, Ruddle, FH, Sub Theoretical Biology, Dep Biologie, Theoretical Biology and Bioinformatics, Hogeweg, Paulien, ten Tusscher, Kirsten H. W. J., Davis, GK, Patel, NH, Peel, A, Akam, M, Couso, JP, Budd, GE, Seaver, EC, Minelli, A, Fusco, G, Tautz, D, Jacobs, DK, Hughes, NC, Fitz-Gibbon, ST, Winchell, CJ, Blair, SS, Wanninger, A, Kristof, A, Brinkmann, N, Chipman, AD, Richmond, DL, Oates, AC, Gold, DA, Runnegar, B, Gehling, JG, Rivera, A, Weisblat, D, Williams, T, Blachuta, B, Hegna, TA, Nagy, LM, Balavoine, G, Bénazéraf, B, Pourquié, O, Mayer, G, Kato, C, Quast, B, Chisholm, RH, Landman, KA, Quinn, LM, Nakamoto, A, Hester, SD, Constantinou, SJ, Blaine, WG, Tewksbury, AB, Matei, MT, Williams, TA, Graham, A, Butts, T, Lumsden, A, Kiecker, C, François, P, Hakim, V, Siggia, ED, Fujimoto, K, Ishihara, S, Kaneko, K, Tusscher, KH, Hogeweg, P, Crombach, A, Salazar-Ciudad, I, Newman, SA, Solé, RV, Pankratz, MJ, Jäckle, H, Crampin, EJ, Hackborn, WW, Maini, PK, Harper, JL, Rosen, BR, White, J, Tusscher, KHWJ, Petersen, CP, Reddien, PW, Martin, BL, Kimelman, D, Young, T, Rowland, JE, Ven, C, Bialecka, M, Novoa, A, Carapuco, M, Nes, J, Graaff, W, Duluc, I, Freund, J-N, Beck, F, Mallo, M, Deschamps, J, Meinhardt, H, Kappen, C, Schughart, K, and Ruddle, FH
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- 2016
9. Frauenlobs 'Minne und Welt'. Paradoxe Effekte literarischer Säkularisierung
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Köbele, Susanne, Quast, Bruno, Köbele, S ( Susanne ), Quast, B ( Bruno ), Köbele, Susanne, Quast, Bruno, Köbele, S ( Susanne ), and Quast, B ( Bruno )
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- 2014
10. Perspektiven einer mediävistischen Säkularisierungsdebatte. Zur Einführung
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Köbele, Susanne, Quast, Bruno, Köbele, S ( Susanne ), Quast, B ( Bruno ), Köbele, Susanne, Quast, Bruno, Köbele, S ( Susanne ), and Quast, B ( Bruno )
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- 2014
11. Haematite recovery from a tailings stream.
- Author
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Quast K., XXV International Mineral Processing Congress: IMPC 2010 Brisbane, Australia 06-Sep-1010-Sep-10, Quast B., Quast K., XXV International Mineral Processing Congress: IMPC 2010 Brisbane, Australia 06-Sep-1010-Sep-10, and Quast B.
- Abstract
Laboratory and pilot scale tests were carried out in 1999 on the recovery of iron from a sample of tailings from an iron ore treatment plant. The tailings, from the Mount Wilson concentrator in Quebec, Canada, contained 16% Fe, mainly in the -38 micron fraction. The use of tabling and magnetic separation produced poor results, while a concentrate containing over 40% Fe was produced by flotation. The best results were obtained using a Kelsey Centrifugal Jig, where a high grade concentrate containing over 67% Fe was produced. Although recoveries were low, the process is considered to be worth further investigation., Laboratory and pilot scale tests were carried out in 1999 on the recovery of iron from a sample of tailings from an iron ore treatment plant. The tailings, from the Mount Wilson concentrator in Quebec, Canada, contained 16% Fe, mainly in the -38 micron fraction. The use of tabling and magnetic separation produced poor results, while a concentrate containing over 40% Fe was produced by flotation. The best results were obtained using a Kelsey Centrifugal Jig, where a high grade concentrate containing over 67% Fe was produced. Although recoveries were low, the process is considered to be worth further investigation.
- Published
- 2010
12. Growth patterns in Onychophora (velvet worms): lack of a localised posterior proliferation zone
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Mayer, G, Kato, C, Quast, B, Chisholm, RH, Landman, KA, Quinn, LM, Mayer, G, Kato, C, Quast, B, Chisholm, RH, Landman, KA, and Quinn, LM
- Abstract
BACKGROUND: During embryonic development of segmented animals, body segments are thought to arise from the so-called "posterior growth zone" and the occurrence of this "zone" has been used to support the homology of segmentation between arthropods, annelids, and vertebrates. However, the term "posterior growth zone" is used ambiguously in the literature, mostly referring to a region of increased proliferation at the posterior end of the embryo. To determine whether such a localised posterior proliferation zone is an ancestral feature of Panarthropoda (Onychophora + Tardigrada + Arthropoda), we examined cell division patterns in embryos of Onychophora. RESULTS: Using in vivo incorporation of the DNA replication marker BrdU (5-bromo-2'-deoxyuridine) and anti-phospho-histone H3 immunolabelling, we found that a localised posterior region of proliferating cells does not occur at any developmental stage in onychophoran embryos. This contrasts with a localised pattern of cell divisions at the posterior end of annelid embryos, which we used as a positive control. Based on our data, we present a mathematical model, which challenges the paradigm that a localised posterior proliferation zone is necessary for segment patterning in short germ developing arthropods. CONCLUSIONS: Our findings suggest that a posterior proliferation zone was absent in the last common ancestor of Onychophora and Arthropoda. By comparing our data from Onychophora with those from annelids, arthropods, and chordates, we suggest that the occurrence of a "posterior growth zone" currently cannot be used to support the homology of segmentation between these three animal groups.
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- 2010
13. Mythos und Metapher : Die Kunst der Anspielung in Gottfrieds Tristan
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Friedrich, Udo, Quast, Bruno, Friedrich, U ( Udo ), Quast, B ( Bruno ), Köbele, Susanne, Friedrich, Udo, Quast, Bruno, Friedrich, U ( Udo ), Quast, B ( Bruno ), and Köbele, Susanne
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- 2004
14. Arbeit am Absolutismus des Mythos: Mittelalterliche Supplemente zur biblischen Heilsgeschichte
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Friedrich, Udo, Quast, Bruno, Friedrich, U ( Udo ), Quast, B ( Bruno ), Kiening, Christian, Friedrich, Udo, Quast, Bruno, Friedrich, U ( Udo ), Quast, B ( Bruno ), and Kiening, Christian
- Published
- 2004
15. A comparison of water consumption following a single intramuscular injection of equiparalytic doses of NeuroBloctm (botulinum toxin type B) and BotoxR (botulinum toxin type A) in mice
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Meyer, K. E., primary, Lugar, J., additional, Liao, Z., additional, Gasper, C. A., additional, Stockwell, E. J., additional, Quast, B. M., additional, Dunn, W. K., additional, Mutter, L. C., additional, Shopp, G. M., additional, and Freedman, S. B., additional
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- 2001
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16. Inhibition of S-nitrosation of reduced glutathione in aerobic solutions of nitric oxide by phosphate and other inorganic anions
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DeMaster, E. G., Quast, B. J., and Mitchell, R. A.
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- 1997
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17. Mechanism for the inhibition of aldehyde dehydrogenase by nitric oxide
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DeMaster, E. G., Redfern, B., Quast, B. J., Dahlseid, T., and Nagasawa, H. T.
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- 1997
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18. Adsorption and inhibition in the hydroquinone/quinone redox system on mercury
- Author
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Plieth, W.J., Stellmacher, I., and Quast, B.
- Abstract
The charge-transfer resistance of the hydroquinone (QH2), quinone (Q) mercury redox system has been determined in its dependence on the concentration of the redox components. Additionally the adsorption-behaviour at the equilibrium potential had been investigated. The results of the resistance and of the adsorption measurements can be explained with the following mechanism for the electrode process: the third reaction being the rate determining step. On the basis of this mechanism the inhibiting effects of several inhibitors are discussed.
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- 1975
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19. ChemInform Abstract: ADSORPTION AND INHIBITION IN THE HYDROQUINONE/QUINONE REDOX SYSTEM ON MERCURY
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PLIETH, W. J., primary, STELLMACHER, I., additional, and QUAST, B., additional
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- 1975
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20. A comparison of water consumption following a single intramuscular injection of equiparalytic doses of NeuroBloc™ (botulinum toxin type B) and Botox® (botulinum toxin type A) in mice.
- Author
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Meyer, K. E., Lugar, J., Liao, Z., Gasper, C. A., Stockwell, E. J., Quast, B. M., Dunn, W. K., Mutter, L. C., Shopp, G. M., and Freedman, S. B.
- Subjects
TREATMENT of dystonia ,THERAPEUTICS ,BOTULINUM toxin ,WATER consumption - Abstract
Introduction Dry mouth is an adverse event reported by cervical dystonia patients treated with botulinum toxin types A and B. It is not clear which serotype (or formulation) leads to the lower incidence of dry mouth: clinical studies comparing serotypes have not been performed and it is inappropriate to compare incidences across separate studies. This study used water consumption in mice treated with either Botox® or NeuroBloc® as a model for the potential incidence of dry mouth in patients. Methods The study comprised three phases: (1) mouse intraperitoneal LD50 assay to confirm potency; (2) mouse hindlimb-paralysis assay to determine the dose-response relationship and paralytic potency; (3) 8-day mouse water-consumption assay using equiparalytic doses of toxins (as determined by assay two) injected into the gastrocnemius muscle. The highest dose chosen for investigation caused marked local toxicity but did not interfere with ability to access drinking water. The lowest dose gave minimal but measurable leg weakness. Investigators were blinded to treatment status. Results (1) Potencies were similar to actual labelled values. (2) Adjusting for measured activity from assay two, the paralytic dose-ratio between Botox® and NeuroBloc™ was 2.23. (3) Daily water consumption in the Botox® groups did not differ from those in the corresponding NeuroBloc™ groups, and neither differed from daily water consumption in control animals. Conclusion Water consumption is similar for mice injected with Botox® and for those injected with NeuroBloc™. This suggests the incidence of dry mouth in patients is unlikely to be different for the two serotypes. [ABSTRACT FROM AUTHOR]
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- 2001
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21. Mythen und Narrative des Entscheidens (Volume 3, Edition 1)
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Wagner-Egelhaaf, Martina, Basu, Helene, Baehr-Olivia, Antonius, Zimmermann, Bernhard, Friedrich, Udo, Musio, Alessio, Quast, Bruno, Schnocks, Johannes, Riedl, Peter Philipp, Keupp, Jan, Haferland, Harald, Grünbart, Michael, Quast, Bruno, Basu, Helene, and Wagner-Egelhaaf, Martina
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Philosophy ,Criticism ,bic Book Industry Communication::H Humanities::HP Philosophy::HPC History of Western philosophy - Abstract
Es gibt Mythen des Entscheidens, die immer wieder erzählt werden, wie beispielsweise die Entscheidung von Adam und Eva im Paradies, vom Baum der Erkenntnis zu essen, das Urteil des Paris, Herakles am Scheideweg oder Buridans Esel, der sich zwischen zwei Heuhaufen nicht entscheiden kann und deshalb zugrunde geht. Der aus dem Münsteraner Sonderforschungsbereich 1150 »Kulturen des Entscheidens« hervorgegangene interdisziplinäre Tagungsband untersucht das Verhältnis von Mythos, Narration und Entscheiden. Er setzt in Mythos und Literatur erzählte Entscheidensszenarien in Bezug zu modernen Theorien des Entscheidens und fragt nach ihrer Funktion sowie den Veränderungen in unterschiedlichen historischen und kulturellen Kontexten. Analysiert werden einerseits Entscheidenssituationen, die in Mythen dargestellt werden; andererseits wird auch deutlich, in welcher Weise Mythen selbst Entscheidensdispositive darstellen. Die Beiträge des Bandes zeigen, wie Entscheidensmythen und -narrative der Kontingenzbewältigung dienen und betonen den sozialen Handlungscharakter des Entscheidens.
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- 2019
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22. SOCCOMAS: a FAIR web content management system that uses knowledge graphs and that is based on semantic programming.
- Author
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Vogt L, Baum R, Bhatty P, Köhler C, Meid S, Quast B, and Grobe P
- Subjects
- Pattern Recognition, Automated, Programming Languages, Semantic Web, User-Computer Interface
- Abstract
We introduce Semantic Ontology-Controlled application for web Content Management Systems (SOCCOMAS), a development framework for FAIR ('findable', 'accessible', 'interoperable', 'reusable') Semantic Web Content Management Systems (S-WCMSs). Each S-WCMS run by SOCCOMAS has its contents managed through a corresponding knowledge base that stores all data and metadata in the form of semantic knowledge graphs in a Jena tuple store. Automated procedures track provenance, user contributions and detailed change history. Each S-WCMS is accessible via both a graphical user interface (GUI), utilizing the JavaScript framework AngularJS, and a SPARQL endpoint. As a consequence, all data and metadata are maximally findable, accessible, interoperable and reusable and comply with the FAIR Guiding Principles. The source code of SOCCOMAS is written using the Semantic Programming Ontology (SPrO). SPrO consists of commands, attributes and variables, with which one can describe an S-WCMS. We used SPrO to describe all the features and workflows typically required by any S-WCMS and documented these descriptions in a SOCCOMAS source code ontology (SC-Basic). SC-Basic specifies a set of default features, such as provenance tracking and publication life cycle with versioning, which will be available in all S-WCMS run by SOCCOMAS. All features and workflows specific to a particular S-WCMS, however, must be described within an instance source code ontology (INST-SCO), defining, e.g. the function and composition of the GUI, with all its user interactions, the underlying data schemes and representations and all its workflow processes. The combination of descriptions in SC-Basic and a given INST-SCO specify the behavior of an S-WCMS. SOCCOMAS controls this S-WCMS through the Java-based middleware that accompanies SPrO, which functions as an interpreter. Because of the ontology-controlled design, SOCCOMAS allows easy customization with a minimum of technical programming background required, thereby seamlessly integrating conventional web page technologies with semantic web technologies. SOCCOMAS and the Java Interpreter are available from (https://github.com/SemanticProgramming)., (© The Author(s) 2019. Published by Oxford University Press.)
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- 2019
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23. Fiat or bona fide boundary--a matter of granular perspective.
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Vogt L, Grobe P, Quast B, and Bartolomaeus T
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- Biological Evolution, Humans, Contrast Sensitivity physiology, Visual Perception physiology
- Abstract
Background: Distinguishing bona fide (i.e. natural) and fiat (i.e. artificial) physical boundaries plays a key role for distinguishing natural from artificial material entities and is thus relevant to any scientific formal foundational top-level ontology, as for instance the Basic Formal Ontology (BFO). In BFO, the distinction is essential for demarcating two foundational categories of material entity: object and fiat object part. The commonly used basis for demarcating bona fide from fiat boundary refers to two criteria: (i) intrinsic qualities of the boundary bearers (i.e. spatial/physical discontinuity, qualitative heterogeneity) and (ii) mind-independent existence of the boundary. The resulting distinction of bona fide and fiat boundaries is considered to be categorial and exhaustive., Methodology/principal Findings: By Referring to various examples from biology, we demonstrate that the hitherto used distinction of boundaries is not categorial: (i) spatial/physical discontinuity is a matter of scale and the differentiation of bona fide and fiat boundaries is thus granularity-dependent, and (ii) this differentiation is not absolute, but comes in degrees. By reducing the demarcation criteria to mind-independence and by also considering dispositions and historical relations of the bearers of boundaries, instead of only considering their spatio-structural properties, we demonstrate with various examples that spatio-structurally fiat boundaries can nevertheless be mind-independent and in this sense bona fide., Conclusions/significance: We argue that the ontological status of a given boundary is perspective-dependent and that the strictly spatio-structural demarcation criteria follow a static perspective that is ignorant of causality and the dynamics of reality. Based on a distinction of several ontologically independent perspectives, we suggest different types of boundaries and corresponding material entities, including boundaries based on function (locomotion, physiology, ecology, development, reproduction) and common history (development, heredity, evolution). We argue that for each perspective one can differentiate respective bona fide from fiat boundaries.
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- 2012
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24. Accommodating ontologies to biological reality--top-level categories of cumulative-constitutively organized material entities.
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Vogt L, Grobe P, Quast B, and Bartolomaeus T
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- Cell Aggregation, Classification, Cluster Analysis, Biomedical Research, Database Management Systems, Databases, Factual, Vocabulary, Controlled
- Abstract
Background: The Basic Formal Ontology (BFO) is a top-level formal foundational ontology for the biomedical domain. It has been developed with the purpose to serve as an ontologically consistent template for top-level categories of application oriented and domain reference ontologies within the Open Biological and Biomedical Ontologies Foundry (OBO). BFO is important for enabling OBO ontologies to facilitate in reliably communicating and managing data and metadata within and across biomedical databases. Following its intended single inheritance policy, BFO's three top-level categories of material entity (i.e. 'object', 'fiat object part', 'object aggregate') must be exhaustive and mutually disjoint. We have shown elsewhere that for accommodating all types of constitutively organized material entities, BFO must be extended by additional categories of material entity., Methodology/principal Findings: Unfortunately, most biomedical material entities are cumulative-constitutively organized. We show that even the extended BFO does not exhaustively cover cumulative-constitutively organized material entities. We provide examples from biology and everyday life that demonstrate the necessity for 'portion of matter' as another material building block. This implies the necessity for further extending BFO by 'portion of matter' as well as three additional categories that possess portions of matter as aggregate components. These extensions are necessary if the basic assumption that all parts that share the same granularity level exhaustively sum to the whole should also apply to cumulative-constitutively organized material entities. By suggesting a notion of granular representation we provide a way to maintain the single inheritance principle when dealing with cumulative-constitutively organized material entities., Conclusions/significance: We suggest to extend BFO to incorporate additional categories of material entity and to rearrange its top-level material entity taxonomy. With these additions and the notion of granular representation, BFO would exhaustively cover all top-level types of material entities that application oriented ontologies may use as templates, while still maintaining the single inheritance principle.
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- 2012
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25. Top-level categories of constitutively organized material entities--suggestions for a formal top-level ontology.
- Author
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Vogt L, Grobe P, Quast B, and Bartolomaeus T
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- Computational Biology
- Abstract
Background: Application oriented ontologies are important for reliably communicating and managing data in databases. Unfortunately, they often differ in the definitions they use and thus do not live up to their potential. This problem can be reduced when using a standardized and ontologically consistent template for the top-level categories from a top-level formal foundational ontology. This would support ontological consistency within application oriented ontologies and compatibility between them. The Basic Formal Ontology (BFO) is such a foundational ontology for the biomedical domain that has been developed following the single inheritance policy. It provides the top-level template within the Open Biological and Biomedical Ontologies Foundry. If it wants to live up to its expected role, its three top-level categories of material entity (i.e., 'object', 'fiat object part', 'object aggregate') must be exhaustive, i.e. every concrete material entity must instantiate exactly one of them., Methodology/principal Findings: By systematically evaluating all possible basic configurations of material building blocks we show that BFO's top-level categories of material entity are not exhaustive. We provide examples from biology and everyday life that demonstrate the necessity for two additional categories: 'fiat object part aggregate' and 'object with fiat object part aggregate'. By distinguishing topological coherence, topological adherence, and metric proximity we furthermore provide a differentiation of clusters and groups as two distinct subcategories for each of the three categories of material entity aggregates, resulting in six additional subcategories of material entity., Conclusions/significance: We suggest extending BFO to incorporate two additional categories of material entity as well as two subcategories for each of the three categories of material entity aggregates. With these additions, BFO would exhaustively cover all top-level types of material entity that application oriented ontologies may use as templates. Our result, however, depends on the premise that all material entities are organized according to a constitutive granularity.
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- 2011
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26. Growth patterns in Onychophora (velvet worms): lack of a localised posterior proliferation zone.
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Mayer G, Kato C, Quast B, Chisholm RH, Landman KA, and Quinn LM
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- Animals, Cell Division, Invertebrates cytology, Models, Theoretical, Invertebrates embryology, Invertebrates growth & development
- Abstract
Background: During embryonic development of segmented animals, body segments are thought to arise from the so-called "posterior growth zone" and the occurrence of this "zone" has been used to support the homology of segmentation between arthropods, annelids, and vertebrates. However, the term "posterior growth zone" is used ambiguously in the literature, mostly referring to a region of increased proliferation at the posterior end of the embryo. To determine whether such a localised posterior proliferation zone is an ancestral feature of Panarthropoda (Onychophora + Tardigrada + Arthropoda), we examined cell division patterns in embryos of Onychophora., Results: Using in vivo incorporation of the DNA replication marker BrdU (5-bromo-2'-deoxyuridine) and anti-phospho-histone H3 immunolabelling, we found that a localised posterior region of proliferating cells does not occur at any developmental stage in onychophoran embryos. This contrasts with a localised pattern of cell divisions at the posterior end of annelid embryos, which we used as a positive control. Based on our data, we present a mathematical model, which challenges the paradigm that a localised posterior proliferation zone is necessary for segment patterning in short germ developing arthropods., Conclusions: Our findings suggest that a posterior proliferation zone was absent in the last common ancestor of Onychophora and Arthropoda. By comparing our data from Onychophora with those from annelids, arthropods, and chordates, we suggest that the occurrence of a "posterior growth zone" currently cannot be used to support the homology of segmentation between these three animal groups.
- Published
- 2010
- Full Text
- View/download PDF
27. [Normal coronary angiography with myocardial bridging: a variant possibly relevant for ischemia].
- Author
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Möhlenkamp S, Eggebrecht H, Ebralidze T, Münzberger S, Schweizer T, Quast B, and Erbel R
- Subjects
- Clinical Trials as Topic, Humans, Myocardial Ischemia diagnosis, Myocardial Ischemia therapy, Practice Guidelines as Topic, Practice Patterns, Physicians', Prognosis, Risk Factors, Echocardiography, Doppler, Color methods, Microvascular Angina diagnosis, Microvascular Angina therapy, Risk Assessment methods, Ultrasonography, Interventional methods
- Abstract
Approximately 20-30% of patients with cardiac chest pain have a normal coronary angiogram. In about 5% of these patients, a myocardial bridge can be identified. The characteristic feature is systolic compression of an epicardial vessel, usually the left anterior descending artery (LAD), with the angiographic "milking effect". Using modern imaging techniques, such as intravascular ultrasound (IVUS), intracoronary Doppler ultrasound (ICD) and intracoronary pressure wires, the pathophysiological consequence of myocardial bridging could be established. While previously considered a clinically insignificant variant, ICD recordings demonstrated an increased flow velocity in the tunneled segment. Frame-by-frame IVUS analysis revealed a delayed relaxation after systolic compression, which may extend significantly into diastole. This explains both the impaired coronary flow reserve and ischemia. In IVUS, a circular or eccentric rhythmic compression of the vessel is visible, which may be partial or complete. Latest computed tomography technology can also be used to visualize myocardial bridging noninvasively. Provocation tests, such as application of nitroglycerin, orciprenaline, dobutamine or atrial stimulation, may augment systolic compression and explain symptoms and the beneficial effect of beta-blockers. In severe cases (i.e. limiting symptoms with ischemia despite medication), surgical myotomy may be performed after careful appraisal of the benefit-risk ratio. A high restenosis and complication rate associated with coronary stenting precludes a general recommendation of this interventional approach. Whether drug-eluting stents help to overcome this limitation remains to be shown. Long-term prognosis is good, although previous investigations have been performed in a limited number of cases only.
- Published
- 2005
- Full Text
- View/download PDF
28. Ratio of cathepsin B to stefin A identifies heterogeneity within Gleason histologic scores for human prostate cancer.
- Author
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Sinha AA, Quast BJ, Wilson MJ, Fernandes ET, Reddy PK, Ewing SL, Sloane BF, and Gleason DF
- Subjects
- Aged, Aged, 80 and over, Cathepsin B antagonists & inhibitors, Humans, Image Processing, Computer-Assisted, Immunohistochemistry, Male, Microscopy, Confocal, Microscopy, Fluorescence, Microscopy, Phase-Contrast, Middle Aged, Prostate-Specific Antigen blood, Prostatic Hyperplasia pathology, Regression Analysis, Cathepsin B metabolism, Cystatins metabolism, Prostatic Hyperplasia enzymology, Prostatic Neoplasms enzymology, Prostatic Neoplasms pathology
- Abstract
Background: Cathepsin B (CB), a lysosomal cysteine protease, is involved in degradation of extracellular matrix proteins and progression of tumor cells from one biological compartment to another in many solid organ cancers, including prostate cancer. Our objective was to identify patterns of distribution of CB and its endogenous cellular inhibitor stefin A in cryostat sections of frozen BPH and prostate cancer tissue samples and to define these patterns in relation to Gleason histologic scores, clinical stages, and serum total PSA levels., Methods: We localized CB and stefin A in the same sections using polyclonal and monoclonal antibody immunoglobulin G (IgGs) against CB and stefin A using immunofluorescence and confocal microscopic techniques. Only cryostat sections of frozen prostates were used in localizations of CB and stefin A., Results: Benign prostatic hyperplasia (BPH) showed similar localization patterns for CB and stefin A and a ratio of 1 was indicated by CB = stefin A. Confocal studies indicated that most CB and stefin A sites in BPH glandular cells overlapped as shown by the yellow fluorescence of their co-localization. We found considerable variability in individual localization of CB and stefin A within and between Gleason histologic scores for prostate cancers. This variability was also found in Gleason score 6 tumors that are otherwise considered similar histologically and morphologically. Negative control sections did not show localization of CB by FITC, stefin A by Cy3 or yellow fluorescence for co-localization. Our analysis of the ratio of CB to stefin A showed three patterns, namely CB = stefin A, CB > stefin A, and CB < stefin A, within each Gleason score evaluated by us. Confocal microscopy showed more sites of yellow fluorescence when the ratio was CB = stefin A than those found in CB > stefin A or CB < stefin A. Statistical analyses showed prostate cancer cases with ratios of CB > stefin A (P < 0.05) and CB < stefin A (P < 0.05) significantly different from normal prostate and BPH which had ratios of CB = stefin A. Regression analysis did not show any specific relationship between the ratio of CB to stefin A and Gleason scores, clinical stages, and serum total prostate specific antigen (PSA) levels in prostate cancers. Analysis of our data indicates that the homeostatic balance between the enzyme and inhibitor was altered even in Gleason histologic score 6 tumors that are usually considered histologically similar by glandular differentiation., Conclusions: We have shown that prostate cancer is a heterogeneous tumor within each Gleason histological score regardless of the progression indicated by lower to higher Gleason score tumors. The ratio of CB > stefin A would indicate a preponderance of enzyme that would favor degradation of extracellular matrix proteins and progression of tumor cells in biological compartments. These tumors are expected to be aggressive prostate cancers. In contrast, prostate tumors showing ratios of CB < stefin A and CB = stefin A are expected to be less aggressive prostate cancers. This is the first report to define heterogeneity within any Gleason score for prostate cancers by the ratios of CB to stefin A., (Copyright 2001 Wiley-Liss, Inc.)
- Published
- 2001
- Full Text
- View/download PDF
29. Dipeptidylpeptidase IV activities are elevated in prostate cancers and adjacent benign hyperplastic glands.
- Author
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Wilson MJ, Ruhland AR, Quast BJ, Reddy PK, Ewing SL, and Sinha AA
- Subjects
- Aged, Blotting, Western, Humans, Male, Middle Aged, Dipeptidyl Peptidase 4 metabolism, Prostatic Hyperplasia enzymology, Prostatic Neoplasms enzymology
- Abstract
Dipeptidylpeptidase IV (DPP IV) is a serine exopeptidase that has been implicated in cell-extracellular matrix interactions and bioactive peptide/cytokine/growth factor metabolism. The objective of this study was to determine if DPP IV activities were changed with development of cancer in the prostate. DPP IV activity was measured in human prostate cancer and benign prostatic hyperplasia (BPH) tissues by biochemical assays with glycylprolyl-p-nitroanalide as substrate in tissue extracts (BPH, n = 8: cancer, n = 7; 2 with Gleason score 5 and 5 with Gleason score 7) and quantitative morphometry of histochemical activities with glycylproline-4-methoxy-beta-naphthylamide as substrate (BPH, n = 9: cancer, n = 13, 1 with Gleason score 4, 10 with Gleason score 6, 2 with Gleason score 8) in frozen-tissue sections. Data were analyzed by analysis of variance. The peptidase activity was detected in epithelial but not stromal cells of BPH and cancer tissues, and it was present as a single band of activity of approximately 160 kDa in electrophoretically separated activity blots of the extracts. DPP IV activity was increased approximately twofold in cancer versus BPH tissues as determined by biochemical and quantitative histochemical methods. In addition, DPP IV activity was increased to a similar extent in BPH glands associated with the cancers. These data indicate that DPP IV activity is increased not only in primary prostatic cancers but also in associated BPH glands, suggesting that there may be some local factors produced by cancer cells that influence adjacent BPH epithelial cells to positively affect the immediate growth environment of the cancer.
- Published
- 2000
30. The relationship of cathepsin B and stefin A mRNA localization identifies a potentially aggressive variant of human prostate cancer within a Gleason histologic score.
- Author
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Sinha AA, Quast BJ, Korkowski JC, Wilson MJ, Reddy PK, Ewing SL, Sloane BF, and Gleason DF
- Subjects
- Adenocarcinoma metabolism, Base Sequence, Cystatin A, DNA Primers, Humans, In Situ Hybridization, Male, Prostatic Neoplasms genetics, RNA, Messenger genetics, Adenocarcinoma pathology, Cathepsin B genetics, Cystatins genetics, Prostatic Neoplasms pathology, RNA, Messenger metabolism
- Abstract
Cathepsin B (CB) is involved in degradation of extracellular matrix proteins during tumor progression in human solid organ tumors (such as colorectal, bladder, and breast cancers), including human prostate cancer. Its activities are regulated by endogenous inhibitors (such as stefins or cystatins). Increased expression of cathepsin B message, protein, and membrane association have been linked to malignancy, but there are very few studies of their mRNA expression in prostate cancer using in situ hybridization techniques. Our objective was to determine the relationship of CB and stefin A (cystatin A) mRNA localization to the Gleason grading system for histologic scores in the hope of distinguishing aggressive and less aggressive variants of prostate cancer. We used a 25-base biotinylated oligonucleotide CB cDNA antisense probe to localize CB message and a 27-base biotinylated oligonucleotide stefin A cDNA antisense probe to localize stefin A message. Prostate samples from 41 prostatectomy patients were collected along with their pre-surgery serum PSA levels and clinical stage of the disease. Sections prepared from frozen prostate tissue samples were hybridized with the CB and stefin A and control pBR 322 probes using techniques reported by Sinha et al. [1] and their distribution quantitated by an image analysis system. Prostate sections treated with RNAse before hybridization or incubated with the pBR 322 control probe showed little or no reaction products, confirming that localization of CB and stefin A probes was specific. In prostate cancer, the reaction products were found in neoplastic and invasive cells and occasionally in stromal cells. The ratios of CB to stefin A were similar in normal prostate and benign prostatic hyperplasia (BPH) whereas they varied consistently within and between Gleason histologic scores for prostate cancer. These variations showed three localization patterns; namely, prostate cancers with higher levels of CB than stefin A, lower levels of CB than stefin A, and similar levels of CB and stefin A. All three patterns and ratios for CB and stefin A were found in prostate samples (22/41) represented by the Gleason histologic score 6 tumors. In these tumors, serum PSA levels ranged from 1 to 78 ng/ml and prostate cancers showed B, C, and D clinical stages. There was no correlation of CB/stefin A ratio and serum PSA values or clinical stage in a limited number of prostate cancer cases. Our data showed that there were prostate cancer cases within Gleason histologic scores which expressed high, similar, and low levels of CB when compared to stefin A. We postulate that prostate cancer cases showing higher levels of CB compared to stefin A probably represent an aggressive variant of this cancer within any one Gleason histologic score. If this is the case, aggressive variants of prostate cancer would occur within Gleason scores 3 to 10 even though higher scores are usually considered more aggressive forms of prostate cancers. Since our study is based upon a very limited number of frozen prostate samples, we emphasize that a larger series of archival prostate cancer samples along with their survival data should be analyzed to establish any relationship of CB/stefin A ratio and aggressive variants of this cancer. Therefore, our conclusion is tentative. Our study provides a partial explanation for differences in the clinical course of prostate cancer in patients. This is the first study to show that determination of CB and stefin A mRNA ratios may lead to identification of aggressive and less aggressive variants of prostate cancer within a Gleason histologic score.
- Published
- 1999
31. Intravenous injection of an immunoconjugate (anti-PSA-IgG conjugated to 5-fluoro-2'-deoxyuridine) selectively inhibits cell proliferation and induces cell death in human prostate cancer cell tumors grown in nude mice.
- Author
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Sinha AA, Quast BJ, Reddy PK, Elson MK, and Wilson MJ
- Subjects
- Animals, Cell Death drug effects, Cell Division drug effects, Humans, Immunoconjugates administration & dosage, Immunoconjugates pharmacokinetics, Injections, Intravenous, Male, Mice, Mice, Nude, Prostatic Neoplasms pathology, Floxuridine therapeutic use, Immunoconjugates therapeutic use, Immunoglobulin G therapeutic use, Prostate-Specific Antigen immunology, Prostatic Neoplasms therapy
- Abstract
Current chemotherapeutic and/or endocrine treatments for adenocarcinoma of the prostate are not delivered selectively to prostate cancer cells, therefore, they are used in very high doses that induce many unpleasant side effects in patients. New approaches are, therefore, needed to deliver drugs directly to prostate cancer cells to improve treatment effects. We hypothesized that antibody immunoglobulin G (IgG) against human prostate specific antigen (PSA) (anti-PSA-IgG) could function as a carrier protein for conjugated chemotherapeutic drugs (such as 5-fluoro-2'-deoxyuridine, doxorubicin, etc.) and that the immunoconjugate could be delivered selectively to PSA-producing neoplastic prostate. Immunoconjugate would then preferentially inhibit cell proliferation and induce cell death in PSA-producing tumor cells, but not in non-PSA-producing prostate cancer cells or other solid organs of the host. The short-term treatment effect could be assessed by measuring cell death and cell proliferation in tumor-bearing animals. We tested our hypothesis by intravenously injecting an immunoconjugate (anti-PSA-IgG-5-fu-2'-d) into nude mice with subcutaneous PSA-producing LNCaP or non-PSA-producing Du-145 prostate tumors. During 5 days of treatment, we observed that immunoconjugate was retained preferentially in PSA-producing LNCaP tumors where it produced cytotoxic effects in neoplastic prostate cells as revealed by decreased cell proliferation and increased cell death, but similar effects were not observed in non-PSA-producing Du-145 tumor cells or mouse organs. Analysis of untreated control mouse with LNCaP tumor, anti-PSA-IgG alone, anti-irrelevant-IgG-drug complex, and drug alone treatments indicated that there was little or no cytotoxic effects of these treatments on LNCaP and Du-145 tumors, and host organs. Our analysis of control and experimental data showed that the immunoconjugate was highly specific in imparting cytotoxic effects on LNCaP prostate tumors, but not on Du-145 tumors and mouse organs. Thus, we have shown that the immunoconjugate selectively delivered a chemotherapeutic drug to PSA-producing prostate tumor cells where it produced measurable cytotoxic effects on cell proliferation and cell death. This is the first report to show a successful delivery of a chemotherapeutic drug in the immunoconjugate to PSA-producing LNCaP prostate tumors in nude mice and without inducing cytotoxic effects on mouse organs.
- Published
- 1999
32. Codistribution of procathepsin B and mature cathepsin B forms in human prostate tumors detected by confocal and immunofluorescence microscopy.
- Author
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Sinha AA, Quast BJ, Wilson MJ, Reddy PK, Gleason DF, and Sloane BF
- Subjects
- Animals, Fluorescent Antibody Technique, Indirect, Humans, Male, Mice, Microscopy, Confocal, Microscopy, Fluorescence, Prostate enzymology, Prostatic Hyperplasia enzymology, Prostatic Hyperplasia pathology, Prostatic Neoplasms pathology, Rabbits, Cathepsin B metabolism, Enzyme Precursors metabolism, Prostatic Neoplasms enzymology
- Abstract
Cathepsin B (CB) is involved in invasion and metastasis of a variety of solid organ tumors, including human prostate cancer. The tertiary structures of the proenzyme and mature forms of CB are related closely, as revealed by crystallographic studies. However, the cellular distributions of the CB forms have not been defined in human prostate and its tumors. Our objective was to investigate the distribution and codistribution of CB and procathepsin B (proCB) in human prostate tumors. Human prostate tissue samples that were obtained from 21 prostatectomy and/or cystectomy patients were collected immediately after surgery and processed for this study. We used a rabbit antihuman liver CB immunoglobulin G (IgG) that recognizes both mature CB and proCB and a mouse antipropeptide monoclonal antibody IgG that recognizes only proCB. Fluorescein isothiocyanate (FITC)-conjugated donkey antirabbit IgG and indocarbocyanine (Cy3; rhodamine)-conjugated donkey antimouse IgG were used to differentiate localization of the enzyme forms. Immunofluorescence of FITC and Cy3 was examined in prostate sections by using epifluorescence and confocal laser-scanning microscopy. Because fluorescence is dependent on section thickness, time needed for study and photography, and the antigenic sites of proCB and mature CB localized by antibodies and by fluorescent markers (Cy3 vs. FITC), the cellular distributions and the relative intensity of fluorescence on cryostat sections were assessed qualitatively. Immunofluorescence of Cy3 for localizing proCB and of FITC for localizing mature CB were observed in prostatic epithelial cells and their tumors and in stromal connective tissue cells. By using confocal microscopy, colocalization of the enzyme forms in the same cells was indicated by yellow fluorescence. In stromal cells (such as smooth muscles, fibroblast, and macrophages), the distribution of proCB and relative fluorescence intensity was moderate to predominant in human prostate and its tumors. In neoplastic prostate, the cellular distributions of CB ranged from low to predominant levels. In some neoplastic glands, Cy3 fluorescence for proCB was absent, whereas the mature form of CB localized in cancer cells and in the subjacent extracellular matrix. Confocal microscopy showed a close association of CB with extracellular matrix surrounding neoplastic acini and invasive cells, indicating that the enzyme form was probably involved in degradation of the matrix proteins. The negative control study showed no specific immunofluorescence for proCB or CB in prostate cancer cases. We have shown a differential distribution of proenzyme and mature forms of CB in normal prostate, benign prostatic hyperplasia, and neoplastic prostate. The enzyme forms were assessed by determining the cellular distributions of CB and proCB. Our study indicates that the differential distribution of proCB and CB might provide clues into aggressiveness of prostate cancers within Gleason grades. However, we emphasize that our observation should be evaluated in a larger series of prostate samples before a definitive conclusion can be reached. This is the first report to show codistribution of proenzyme and mature forms of CB by using confocal microscopy.
- Published
- 1998
- Full Text
- View/download PDF
33. Immunocytochemical localization of an immunoconjugate (antibody IgG against prostatic acid phosphatase conjugated to 5-fluoro-2'-deoxyuridine) in human prostate tumors.
- Author
-
Sinha AA, Quast BJ, Wilson MJ, Reddy PK, Fernandes ET, Ewing SL, and Gleason DF
- Subjects
- Animals, Colon cytology, Epithelial Cells pathology, Humans, Immunoglobulin G, Immunohistochemistry methods, Intestinal Mucosa cytology, Kidney cytology, Male, Neoplasm Invasiveness, Prostate enzymology, Prostate surgery, Prostatic Neoplasms surgery, Rabbits, Acid Phosphatase immunology, Floxuridine analysis, Immunotoxins analysis, Prostate pathology, Prostatic Neoplasms pathology
- Abstract
Current chemotherapeutic and/or endocrine treatments for adenocarcinoma of the prostate (CaP) do not selectively target neoplastic prostate cells. Therefore, new approaches are needed to improve treatment for prostate tumors. We hypothesized that because of the specific binding of antibody immunoglobulin G (IgG) against human prostatic acid phosphatase (PAcP), PAcP-IgG could function as a carrier protein for the conjugated chemotherapeutic drugs and that the immunoconjugate would then selectively localize (bind) to epithelial cells of human prostate tumors, but not to epithelial cells of other solid organs. Our objective was to test this hypothesis using human prostate, colon, and kidney tissue samples and human prostate pieces incubated in short-term organ culture. We used derivatives of 5-fluorouracil labeled with fluorescein isothiocyanate (FITC) and rabbit anti-PAcP-IgG tagged with CY3/rhodamine alone or as an immunoconjugate. Localization of PAcP-IgG alone and the immunoconjugate in prostate produced similar and specific immunostaining in prostate epithelial cells and their tumors, but not in epithelia of colon and kidney tissue sections or in prostate sections-treated with normal rabbit serum. Confocal microscopy showed co-localization of CY3 and FITC of the immunoconjugate in the same group of prostate epithelial cells and their tumors. Organ culture studies showed that human prostate tissue samples incubated with normal rabbit serum did not show any fluorescence whereas those cultured with PAcP-IgG immunoconjugate showed fluorescence in glandular epithelial cells. The later study also showed that in organ culture the immunoconjugate had penetrated and labeled prostate glands internal to the cut surfaces. Drug labeled with FITC did not localize specifically in the prostatic epithelium. Analysis of our data has shown that PAcP-IgG was needed for specific localization of the immunoconjugate in prostate glands. We conclude that PAcP-IgG was essential for delivery and binding of the drug in human prostate. This is the first report to show that PAcP-IgG-5-Fu-2'-d-based immunoconjugate was selective and specific to epithelial cells of human prostate and its tumors, as revealed by organ culture, immunocytochemical, and confocal microscopic techniques.
- Published
- 1998
34. Utility of a nitric oxide electrode for monitoring the administration of nitric oxide in biologic systems.
- Author
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Tristani-Firouzi M, DeMaster EG, Quast BJ, Nelson DP, and Archer SL
- Subjects
- Animals, Blood Pressure drug effects, Blood Pressure physiology, Hydrazines pharmacology, In Vitro Techniques, Lung metabolism, Male, Monitoring, Physiologic, Nitric Oxide metabolism, Nitrogen Oxides, Perfusion, Potassium Channels drug effects, Potassium Channels physiology, Pulmonary Artery cytology, Pulmonary Artery drug effects, Pulmonary Artery physiology, Rats, Rats, Sprague-Dawley, Sensitivity and Specificity, Ion-Selective Electrodes, Nitric Oxide administration & dosage, Nitric Oxide analysis
- Abstract
Amperometric techniques for the detection of nitric oxide (NO) are commercially available, but their sensitivity and specificity are not well described. We evaluated the sensitivity and specificity of a Clark-style, platinum NO electrode. The electrode has a lower limit of detection for NO of <25 pmol/ml in vitro and is linear over the range from 25 pmol/ml to 4 nmol/ml. The electrode is specific for NO so long as the protective membrane that covers the electrode is intact. Any defect in this membrane results in the detection of other redox agents such as hydrogen peroxide. Because of its ease of handling, specificity, and sensitivity, the NO electrode is a useful tool for quantification of administered NO in vitro and in various biologic systems.
- Published
- 1998
- Full Text
- View/download PDF
35. Reaction of nitric oxide with the free sulfhydryl group of human serum albumin yields a sulfenic acid and nitrous oxide.
- Author
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DeMaster EG, Quast BJ, Redfern B, and Nagasawa HT
- Subjects
- Humans, Hydrazines chemistry, Nitrogen Oxides, Oxidation-Reduction, Oxygen chemistry, Nitric Oxide chemistry, Nitrous Oxide chemistry, Serum Albumin chemistry, Sulfenic Acids chemistry, Sulfhydryl Compounds chemistry
- Abstract
Nitric oxide (NO) generated by diethylamine nonoate (DEA/NO), an NO donor, readily oxidized the free sulfhydryl group of human serum albumin (HSA) as well as the sulfhydryl groups of reduced glutathione (GSH) and dithiothreitol (DTT) at pH 7.4 and 37 degrees C. Under anaerobic conditions, the major products of the oxidation of HSA thiol by NO were the sulfenic acid (RSOH) of HSA and nitrous oxide (N2O). The stoichiometry for this reaction, viz., 1 mol of HSA sulfhydryl oxidized to 1 mol of N2O produced, is consistent with a net two-electron oxidation of the protein thiol to a sulfenic acid. The sulfenic acid product of HSA was shown to react with dimedone and GSH, two known reactions of sulfenic acids. In contrast, anaerobic oxidation of GSH and DTT by NO gave a stoichiometry close to the expected ratio of 2:1 (sulfhydryl oxidized to N2O produced) for the oxidation of these thiols to their disulfides and N2O. Under aerobic conditions, significant fractions of the sulfhydryl groups of HSA, GSH, and DTT were oxidized to their respective thionitrites, presumably by N2O3. Thionitrite formation was not observed in the absence of oxygen. The production of HSA-sulfenic acid by NO, as well as by other oxidizing agents such as H2O2 and peroxynitrite, followed by its reaction with circulating GSH or L-Cys may account for the mixed disulfides of HSA observed in plasma.
- Published
- 1995
- Full Text
- View/download PDF
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