15 results on '"Qianwen Deng"'
Search Results
2. Defining upstream enhancing and inhibiting sequence patterns for plant peroxisome targeting signal type 1 using large‐scale in silico and in vivo analyses
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Qianwen Deng, He Li, Yanlei Feng, Ruonan Xu, Weiran Li, Rui Zhu, Delara Akhter, Xingxing Shen, Jianping Hu, Hangjin Jiang, and Ronghui Pan
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Peroxisomes ,Genetics ,Animals ,Amino Acid Sequence ,Cell Biology ,Plant Science ,Plants ,Protein Sorting Signals ,Peroxisomal Targeting Signals - Abstract
Peroxisomes are universal eukaryotic organelles essential to plants and animals. Most peroxisomal matrix proteins carry peroxisome targeting signal type 1 (PTS1), a C-terminal tripeptide. Studies from various kingdoms have revealed influences from sequence upstream of the tripeptide on peroxisome targeting, supporting the view that positive charges in the upstream region are the major enhancing elements. However, a systematic approach to better define the upstream elements influencing PTS1 targeting capability is needed. Here, we used protein sequences from 177 plant genomes to perform large-scale and in-depth analysis of the PTS1 domain, which includes the PTS1 tripeptide and upstream sequence elements. We identified and verified 12 low-frequency PTS1 tripeptides and revealed upstream enhancing and inhibiting sequence patterns for peroxisome targeting, which were subsequently validated in vivo. Follow-up analysis revealed that nonpolar and acidic residues have relatively strong enhancing and inhibiting effects, respectively, on peroxisome targeting. However, in contrast to the previous understanding, positive charges alone do not show the anticipated enhancing effect and that both the position and property of the residues within these patterns are important for peroxisome targeting. We further demonstrated that the three residues immediately upstream of the tripeptide are the core influencers, with a 'basic-nonpolar-basic' pattern serving as a strong and universal enhancing pattern for peroxisome targeting. These findings have significantly advanced our knowledge of the PTS1 domain in plants and likely other eukaryotic species as well. The principles and strategies employed in the present study may also be applied to deciphering auxiliary targeting signals for other organelles.
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- 2022
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3. Changes in Atmospheric Gaseous Elemental Mercury Concentrations and Isotopic Compositions at Mt. Changbai During 2015–2021 and Mt. Ailao During 2017–2021 in China
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Xian Wu, Xuewu Fu, Hui Zhang, Kaihui Tang, Xun Wang, Qianwen Deng, Leiming Zhang, Kaiyun Liu, Qingru Wu, Shuxiao Wang, and Xinbin Feng
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Atmospheric Science ,Geophysics ,Space and Planetary Science ,Earth and Planetary Sciences (miscellaneous) - Published
- 2023
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4. Extraction of ultratrace dissolved gaseous mercury and reactive mercury in natural freshwater for stable isotope analysis
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Leiming Zhang, Xian Wu, Qianwen Deng, Xinbin Feng, Xuewu Fu, and Hui Zhang
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Gaseous mercury ,Isotope ,Chemistry ,Aquatic ecosystem ,Extraction (chemistry) ,chemistry.chemical_element ,Mass spectrometry ,Analytical Chemistry ,Mercury (element) ,Environmental chemistry ,medicine ,Spectroscopy ,Isotope analysis ,Activated carbon ,medicine.drug - Abstract
Dissolved gaseous mercury (DGM) and reactive mercury (RHg) are important mercury (Hg) forms in natural water bodies. Knowledge of the concentration levels and isotope compositions of DGM and RHg in aquatic ecosystems is of crucial importance for understanding the fate of Hg and Hg cycle. In this study, we developed a method to preconcentrate the ultratrace levels of DGM and RHg in freshwater for stable isotope analysis. In this method, 10 L of amended water (or after addition of acidic SnCl2) was purged for 2 hours with Hg-free air gas at 4 L min−1, and the Hg(0) product was then collected onto a chlorine-impregnated activated carbon (CLC) trap. This process was repeated for a total of 80 L water for DGM collection or 40 L of water for RHg collection in order to obtain sufficient DGM and RHg amounts for isotope analysis. DGM and RHg collected on CLC traps were then thermally desorbed and further preconcentrated into 40% acid-trapping solutions for stable isotope analysis using cold vapor multicollector-inductively coupled plasma-mass spectrometry (CV-MC-ICPMS). The method was evaluated by laboratory tests using additions of certified Hg(0) and Hg(II) references with known concentrations and isotopic compositions as well as field measurements of duplicate samples. The laboratory tests showed that 98.1 ± 8.1% of DGM (1sd, ranging from 85.1 to 115.9%, n = 14) and 98.7 ± 8.7% of RHg (81.3 to 122%, n = 33) could be extracted from freshwater, and the isotopic compositions of the extracted Hg(0) and Hg(II) agreed well with the injected Hg(0) and Hg(II) references (paired sample T test: p values ≥ 0.20 for all Hg isotope signatures). Based on the results from the laboratory tests, we propose the expanded uncertainty (2sd) of δ202Hg, Δ199Hg, and Δ200Hg to be 0.28‰, 0.07‰, and 0.07‰, respectively, for DGM isotope analysis, and 0.25‰, 0.07‰, and 0.07‰, respectively, for RHg isotope analysis. The duplicate field tests showed negligible differences in DGM and RHg isotopic compositions between the paired samples. These results demonstrate that the extraction method can accurately measure DGM and RHg isotopic compositions in freshwater, providing a useful tool for investigating Hg at ultratrace levels in an aquatic environment.
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- 2021
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5. Transcription Factors Rc and OsVP1 Coordinately Regulate Preharvest Sprouting Tolerance in Red Pericarp Rice
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Jun Fang, Xujiang Wu, Yunfei Han, Jing Wang, Aihua Liu, Yuhua Li, Yang Yu, Qianwen Deng, Xiangdong Luo, Jiaqiang Sun, Xin Liu, and Lan Ju
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0106 biological sciences ,010401 analytical chemistry ,Mutant ,Seed dormancy ,food and beverages ,General Chemistry ,Biology ,01 natural sciences ,0104 chemical sciences ,Complementation ,chemistry.chemical_compound ,Horticulture ,Coleoptile ,chemistry ,Germination ,Preharvest ,General Agricultural and Biological Sciences ,Abscisic acid ,010606 plant biology & botany ,Sprouting - Abstract
Red pericarp associates with seed dormancy or preharvest sprouting (PHS) tolerance in crops. To identify this association's molecular mechanism, a PHS mutant Osviviparous1 (Osvp1) was characterized in rice and crossed with Kasalath, a red pericarp cultivar with Rc (red coleoptiles) genotype. Among the dehulled seeds of F2 progenies, RcRcvp1vp1 seeds performed a lower PHS rate than rcrcvp1vp1 seeds and showed shallower pigmentation than RcRcVP1VP1 seeds. Kasalath and SL9 (an RcRcVP1VP1 substitution line with Nipponbare background) showed more ABA sensitivity than the Nipponbare (rcrcVP1VP1) by the germination assay, and the transcriptional abundance of ABA signal genes OsABI2, OsSnRK2, OsVP1, ABI5, and especially OsVP1 increased in the red pericarp line SL9. Moreover, OsVP1 can directly bind Rc (bHLH) promoter by yeast one-hybrid, which activates Rc and OsLAR expression in red pericarp rice. Furthermore, a luciferase complementation imaging assay showed that OsVP1 interacts with transcriptions factors Rc and OsC1. These results indicate that OsVP1 promotes proanthocyanidin accumulation through the interaction among OsVP1, Rc, and OsC1 and then increases the plant's ABA sensitivity and PHS resistance.
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- 2020
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6. Identification of Phosphorus Stress Related Proteins in the Seedlings of Dongxiang Wild Rice (Oryza Rufipogon Griff.) Using Label-Free Quantitative Proteomic Analysis
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Qianwen Deng, Liangfang Dai, Yaling Chen, Decai Wu, Yu Shen, Jiankun Xie, and Xiangdong Luo
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label-free quantitative proteomic ,Genetics ,Dongxiang wild rice ,low phosphorus stress ,seedling ,QH426-470 ,Genetics (clinical) - Abstract
Phosphorus (P) deficiency tolerance in rice is a complex character controlled by polygenes. Through proteomics analysis, we could find more low P tolerance related proteins in unique P-deficiency tolerance germplasm Dongxiang wild rice (Oryza Rufipogon, DXWR), which will provide the basis for the research of its regulation mechanism. In this study, a proteomic approach as well as joint analysis with transcriptome data were conducted to identify potential unique low P response genes in DXWR during seedlings. The results showed that 3589 significant differential accumulation proteins were identified between the low P and the normal P treated root samples of DXWR. The degree of change was more than 1.5 times, including 60 up-regulated and 15 downregulated proteins, 24 of which also detected expression changes of more than 1.5-fold in the transcriptome data. Through quantitative trait locus (QTLs) matching analysis, seven genes corresponding to the significantly different expression proteins identified in this study were found to be uncharacterized and distributed in the QTLs interval related to low P tolerance, two of which (LOC_Os12g09620 and LOC_Os03g40670) were detected at both transcriptome and proteome levels. Based on the comprehensive analysis, it was found that DXWR could increase the expression of purple acid phosphatases (PAPs), membrane location of P transporters (PTs), rhizosphere area, and alternative splicing, and it could decrease reactive oxygen species (ROS) activity to deal with low P stress. This study would provide some useful insights in cloning the P-deficiency tolerance genes from wild rice, as well as elucidating the molecular mechanism of low P resistance in DXWR.
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- 2022
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7. Identification of Phosphorus Stress Related Proteins in the Seedlings of Dongxiang Wild Rice (
- Author
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Qianwen, Deng, Liangfang, Dai, Yaling, Chen, Decai, Wu, Yu, Shen, Jiankun, Xie, and Xiangdong, Luo
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Proteomics ,Proteome ,label-free quantitative proteomic ,Quantitative Trait Loci ,Oryza ,Phosphorus ,seedling ,low phosphorus stress ,Article ,Gene Expression Regulation, Plant ,Seedlings ,Stress, Physiological ,Transcriptome ,Dongxiang wild rice ,Heat-Shock Proteins ,Plant Proteins - Abstract
Phosphorus (P) deficiency tolerance in rice is a complex character controlled by polygenes. Through proteomics analysis, we could find more low P tolerance related proteins in unique P-deficiency tolerance germplasm Dongxiang wild rice (Oryza Rufipogon, DXWR), which will provide the basis for the research of its regulation mechanism. In this study, a proteomic approach as well as joint analysis with transcriptome data were conducted to identify potential unique low P response genes in DXWR during seedlings. The results showed that 3589 significant differential accumulation proteins were identified between the low P and the normal P treated root samples of DXWR. The degree of change was more than 1.5 times, including 60 up-regulated and 15 downregulated proteins, 24 of which also detected expression changes of more than 1.5-fold in the transcriptome data. Through quantitative trait locus (QTLs) matching analysis, seven genes corresponding to the significantly different expression proteins identified in this study were found to be uncharacterized and distributed in the QTLs interval related to low P tolerance, two of which (LOC_Os12g09620 and LOC_Os03g40670) were detected at both transcriptome and proteome levels. Based on the comprehensive analysis, it was found that DXWR could increase the expression of purple acid phosphatases (PAPs), membrane location of P transporters (PTs), rhizosphere area, and alternative splicing, and it could decrease reactive oxygen species (ROS) activity to deal with low P stress. This study would provide some useful insights in cloning the P-deficiency tolerance genes from wild rice, as well as elucidating the molecular mechanism of low P resistance in DXWR.
- Published
- 2021
8. Vertically MoS 2 on Reduced Graphene Oxide with Superior Durability for Quasi‐solid‐state Supercapacitor
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Xiaomin Wang, Huijun Li, Qianwen Deng, and Nianjun Jiang
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Supercapacitor ,chemistry.chemical_compound ,Materials science ,chemistry ,Graphene ,law ,Oxide ,General Chemistry ,Composite material ,Quasi-solid ,Durability ,law.invention - Published
- 2019
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9. Transcription Factors
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Jing, Wang, Qianwen, Deng, Yuhua, Li, Yang, Yu, Xin, Liu, Yunfei, Han, Xiangdong, Luo, Xujiang, Wu, Lan, Ju, Jiaqiang, Sun, Aihua, Liu, and Jun, Fang
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Gene Expression Regulation, Plant ,Seeds ,Germination ,Oryza ,Pigments, Biological ,Plant Dormancy ,Abscisic Acid ,Plant Proteins ,Transcription Factors - Abstract
Red pericarp associates with seed dormancy or preharvest sprouting (PHS) tolerance in crops. To identify this association's molecular mechanism, a PHS mutant
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- 2020
10. Synthesis of magnetic Fe
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Yanchun, Qiu, Dan, Deng, Qianwen, Deng, Ping, Wu, Hui, Zhang, and Chenxin, Cai
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This work reports a facile synthesis of magnetic hybrids (Fe
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- 2020
11. Precise analysis of antimony isotopic composition in geochemical materials by MC-ICP-MS
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Xinyu Li, Qianwen Deng, Xian Wu, Xinbin Feng, Yunjie Wu, Xuewu Fu, Feiyue Wang, and Guangyi Sun
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Matrix (chemical analysis) ,Human health ,Isotope ,Ion exchange ,Antimony ,chemistry ,Geochemistry and Petrology ,Mc icp ms ,Analytical chemistry ,chemistry.chemical_element ,Geology ,Isotopic composition - Abstract
Antimony (Sb) isotopes have been shown to be promising tracers for studying Sb cycling in the environment and its impact on ecosystem and human health. Yet precise measurements of Sb isotopic composition have been challenged by low Sb concentrations and high matrix effect and by the lack of a common reference material (zero-delta). Here we report an improved analytical scheme that is capable of high-precision measurement of Sb isotopes in environmental and geochemical samples. The method employs a two-column ion exchange set-up to remove interfering matrix elements to allow Sb isotopic measurements with low Sb (
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- 2021
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12. Zn-Co Sulfide Microflowers Anchored on Three-Dimensional Graphene: A High-Capacitance and Long-Cycle-Life Electrode for Asymmetric Supercapacitors
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Qianwen Deng, Zhewei Yang, Yucheng Wu, Xiaomin Wang, and Zhen Tian
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Supercapacitor ,010405 organic chemistry ,Graphene ,Chemistry ,Organic Chemistry ,General Chemistry ,Substrate (electronics) ,010402 general chemistry ,Electrochemistry ,01 natural sciences ,Capacitance ,Catalysis ,Energy storage ,0104 chemical sciences ,law.invention ,Chemical engineering ,law ,Electrode ,Hydrothermal synthesis - Abstract
Zinc-cobalt double-metal sulfides (ZCS) as Faradic electrode materials with high energy density have great potential for supercapacitors, but their poor transfer efficiency for electrons and ions hinders their electrochemical response. Herein, ZnCo2 (CO3 )1.5 (OH)3 @ZCS microflower hybrid arrays consisting of thin nanolayer petals were anchored on three-dimensional graphene (ZnCo2 (CO3 )1.5 (OH)3 @ZCS/3DG) by a simple hydrothermal method and additional ion-exchange process. A ZnCo2 (CO3 )1.5 (OH)3 @ZCS/3DG electrode delivered high capacitance (2228 F g-1 at 1 A g-1 ) and long cycling life (85.7 % retention after 17 000 cycles), which are ascribed to the multicomponent structural design. The 3DG conductive substrate improves the electron-transfer dynamics of the electrode material. Meanwhile, the microflowers consisting of thin nanolayer petals could not only provide many active sites for ions to improve the capacitance, but also alleviate the volume expansion to ensure the structural stability. Furthermore, an all-solid-state asymmetric supercapacitor based on a ZnCo2 (CO3 )1.5 (OH)3 @ZCS/3DG electrode achieved a high energy density of 27 W h kg-1 at 528.3 W kg-1 and exhibits exceptional cyclic stability for 23 000 cycles. Its ability to light a blue LED for 9 min verified the feasibility of its application for energy storage devices.
- Published
- 2019
13. "I'm not a virus": A Critical Reading of 'the Women with the Issue of Blood' through the Eyes of Asian Women in Australia beyond COVID 19 Pandemic.
- Author
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Callista, Sarah and Qianwen Deng
- Subjects
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COVID-19 pandemic , *ASIAN diaspora , *RACE discrimination , *TRANSGRESSION (Ethics) , *GENDER identity - Abstract
The story of the woman with the issue of blood (Mark 5:25-34) is often read with an emphasis on holistic healing, which includes a transformation of identity from a disease-carrying outcast. In light of the intensified COVID 19-related 'Asian-hate' and the micro and macro racial discriminations towards Asian diaspora in Western countries like Australia, while reading this story, Asian diaspora Christian women found themselves caught in the tension of yearning for transformation but empathise with the transgression of these women in the current reality of their lives. Knowing Jesus restored this woman enhanced faith but acknowledging the pain in the waiting is critical to the healing and transformation of the Asian diaspora women. To better understand how this experience interacts with one's reading of the story, this article asks, "what does the identity of the women with the issue of blood pre her healing mean for us as Asian diaspora women in Australia beyond COVID 19 pandemic." This article records the authors' personal reflection of being marginalised to empathise with the story of the women with the issue of blood using a narrative criticism method. By examining the intersectional factors which affect the formation of identity, the article discusses how the image of the woman with the issue of blood pre her healing exemplifies the experience of the Asian diaspora women. [ABSTRACT FROM AUTHOR]
- Published
- 2022
14. Abusive Supervision, Psychological Distress, and Silence: The Effects of Gender Dissimilarity Between Supervisors and Subordinates
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Min Z. Carter, Richard S. DeFrank, Qianwen Deng, and Joon Hyung Park
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Economics and Econometrics ,Mediation (statistics) ,Abusive supervision ,05 social sciences ,Psychological distress ,050109 social psychology ,Conservation of resources theory ,Employee silence ,General Business, Management and Accounting ,Silence ,Arts and Humanities (miscellaneous) ,0502 economics and business ,Relational context ,0501 psychology and cognitive sciences ,Business and International Management ,Business ethics ,Psychology ,Law ,Social psychology ,050203 business & management - Abstract
Previous research has shed light on the detrimental effects of abusive supervision. To extend this area of research, we draw upon conservation of resources theory to propose (a) a causal relationship between abusive supervision and psychological distress, (b) a mediating role of psychological distress on the relationship between abusive supervision and employee silence, and (c) a moderating effect of the supervisor–subordinate relational context (i.e., gender dissimilarity) on the mediating effect of abusive supervision on silence. Through an experimental study (Study 1), we found the causal path linking abusive supervision and psychological distress. Results of both the experimental study and a field study (Study 2) provided evidence that psychological distress mediated the relationship between abusive supervision and silence. Lastly, we found support that this mediation effect was contingent upon the relational context in Study 2 but not in Study 1. We discuss implications for theory and practice.
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- 2016
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15. Synthesis of magnetic Fe3O4–Au hybrids for sensitive SERS detection of cancer cells at low abundance
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Qianwen Deng, Dan Deng, Yanchun Qiu, Hui Zhang, Ping Wu, and Chenxin Cai
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A549 cell ,Analyte ,Materials science ,Abundance (chemistry) ,Biomedical Engineering ,Nanoparticle ,Nanotechnology ,General Chemistry ,General Medicine ,symbols.namesake ,Antigen-antibody interaction ,Cancer cell ,symbols ,Biophysics ,General Materials Science ,Raman spectroscopy ,Volume concentration - Abstract
This work reports a facile synthesis of magnetic hybrids (Fe3O4–Au hybrids) with high SERS activity for detecting a low abundance of cancer cells. We labeled Raman reporter molecule 4-aminothiophenol (4-ATP) and the antibody of CEA (anti-CEA) on Fe3O4–Au hybrid nanoparticles (anti-CEA/4-ATP/Fe3O4–Au) as SERS tags and anti-CEA-labeled Au NPs (anti-CEA/Au) as SERS-active substrates to improve detection sensitivity. In the presence of CEA positive-expressed cancer cells (such as non-small lung cancer cells, A549), sandwich structures were formed as both SERS tags and SERS-active substrates could be bound to CEA at cell surfaces, leading to the formation of SERS hot spots at the junction of SERS tags and SERS-active substrates. As a result, an enhanced SERS signal of 4-ATP arose, which could be used to detect CEA on cell surfaces. This assay can specifically detect CEA-expressed A549 cells at a very low abundance (∼10 cells mL−1) and can be used for evaluating CEA expression levels of different cancer cells line. This assay has the advantages of high sensitivity (because the SERS technique itself enables the detection of very low concentration analytes, even single molecules), high specificity (because of the enhanced SERS signal arising in sandwich configuration, which is formed in specific antigen–antibody interaction events), and high efficiency (because the magnetic SERS tags can concentrate the captured cells and separate them from the complex detection system without repetitive washing steps). These features make our developed assay a rapid and facile method to sensitively detect a low abundance of cancer cells.
- Published
- 2015
- Full Text
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