84 results on '"Qafoku O"'
Search Results
2. Synthesis and properties of titanomagnetite (Fe3−xTixO4) nanoparticles: A tunable solid-state Fe(II/III) redox system
- Author
-
Pearce, C.I., Qafoku, O., Liu, J., Arenholz, E., Heald, S.M., Kukkadapu, R.K., Gorski, C.A., Henderson, C.M.B., and Rosso, K.M.
- Published
- 2012
- Full Text
- View/download PDF
3. In situ XRD study of Ca2+ saturated montmorillonite (STX-1) exposed to anhydrous and wet supercritical carbon dioxide
- Author
-
Schaef, H.T., Ilton, E.S., Qafoku, O., Martin, P.F., Felmy, A.R., and Rosso, K.M.
- Published
- 2012
- Full Text
- View/download PDF
4. The effect of ion irradiation on the dissolution of UO2 and UO2-based simulant fuel
- Author
-
Popel, AJ, Wietsma, TW, Engelhard, MH, Lea, AS, Qafoku, O, Grygiel, C, Monnet, I, Ilton, ES, Bowden, ME, Farnan, I, Popel, Aleksej [0000-0003-4436-9961], Farnan, Ian [0000-0001-7844-5112], and Apollo - University of Cambridge Repository
- Subjects
Simfuel ,Radiation damage ,Ion irradiation ,Secondary phases ,UO2 ,Dissolution - Abstract
The aim of this work was to study the separate effect of fission fragment damage on the dissolution of simulant UK advanced gas-cooled reactor nuclear fuel in water. Plain UO2 and UO2 samples, doped with inactive fission products to simulate 43 GWd/tU of burn-up, were fabricated. A set of these samples were then irradiated with 92 MeV 129Xe23+ ions to a fluence of 4.8 × 1015 ions/cm2 to simulate the fission damage that occurs within nuclear fuels. The primary effect of the irradiation on the UO2 samples, observed by scanning electron microscopy, was to induce a smoothening of the surface features and formation of hollow blisters, which was attributed to local heating during the ion irradiation. Dissolution experiments were conducted in single-pass flow-through (SPFT) mode under anoxic conditions (< 0.1 O2 ppm in Ar) to study the effect of the induced irradiation damage on the dissolution of the UO2 matrix with data collection capturing six minute intervals for several hours. These time-resolved data showed that the irradiated samples showed a higher initial release of uranium than unirradiated samples, but that the uranium concentrations converged towards ~10-9 mol/l after a few hours. Apart from the initial spike in uranium concentration, attributed to irradiation induced surficial micro-structural changes, no noticeable difference in uranium chemistry as measured by X-ray electron spectroscopy or ‘effective solubility’ was observed between the irradiated, doped and undoped samples in this work. Some secondary phase formation was observed on the surface of UO2 samples after the dissolution experiment.
- Published
- 2018
5. Reaction of Water-Saturated Supercritical CO2 with Forsterite: Evidence for Magnesite Formation at Low Temperatures
- Author
-
Qafoku, O., Arey, B. W., Hu, J.Z., Hu, M. Y., Schaef, H. T., Ilton, E. S., Hess, N. J., Pearce, C. I., Feng, J., and Rosso, K. M.
- Subjects
ResearchInstitutes_Networks_Beacons/dalton_nuclear_institute ,Dalton Nuclear Institute - Published
- 2012
6. Tc(VII) reduction kinetics by titanomagnetite (Fe3-xTixO4) nanoparticles
- Author
-
Liu, J., Pearce, C. I., Qafoku, O., Arenholz, E., Heald, S. M., and Rosso, K. M.
- Subjects
ResearchInstitutes_Networks_Beacons/dalton_nuclear_institute ,Dalton Nuclear Institute - Published
- 2012
7. Advantages of using Plasma FIB Over a Gallium LMIS Source
- Author
-
Arey, B.W., primary, Perera, D.E., additional, Kovarik, L., additional, Liu, J., additional, Qafoku, O., additional, Felmy, A. R., additional, Kelley, R., additional, Landin, T., additional, and Alvis, R., additional
- Published
- 2015
- Full Text
- View/download PDF
8. Understanding Fayalite Chemistry using Electron Microscopy and Atom Probe Tomography
- Author
-
Arey, B.W., primary, Perea, D.E., additional, Kovarik, L., additional, Colby, R.J., additional, Liu, J., additional, Qafoku, O., additional, and Felmy, A. R., additional
- Published
- 2014
- Full Text
- View/download PDF
9. Characterization of natural titanomagnetites (Fe3−xTixO4) for studying heterogeneous electron transfer to Tc(VII) in the Hanford subsurface
- Author
-
Pearce, C.I., primary, Liu, J., additional, Baer, D.R., additional, Qafoku, O., additional, Heald, S.M., additional, Arenholz, E., additional, Grosz, A.E., additional, McKinley, J.P., additional, Resch, C.T., additional, Bowden, M.E., additional, Engelhard, M.H., additional, and Rosso, K.M., additional
- Published
- 2014
- Full Text
- View/download PDF
10. Heterogeneous reduction of 239PuO2 by aqueous Fe(II) in the presence of hematite
- Author
-
Felmy, A. R., primary, Moore, D. A., additional, Qafoku, O., additional, Buck, E., additional, Conradson, S. D., additional, and Ilton, E. S., additional
- Published
- 2013
- Full Text
- View/download PDF
11. Mapping the Complex Phase Formation at the Surface of Supercritical CO Reacted Fayalite for Geologic Sequestration of Greenhouse Gases
- Author
-
Perea, D.E., primary, Liu, J., additional, Arey, B., additional, Kovarik, L., additional, Colby, R., additional, Qafoku, O., additional, Thevuthasan, T., additional, and Felmy, A.R., additional
- Published
- 2013
- Full Text
- View/download PDF
12. Understanding Mineral Carbonate Formation under Supercritical Conditions using Electron Microscopy and Atom Probe Tomography
- Author
-
Arey, B.W., primary, Perera, D.E., additional, Kovarik, L., additional, Colby, R.J., additional, Qafoku, O., additional, and Felmy, A.R., additional
- Published
- 2013
- Full Text
- View/download PDF
13. Tc(VII) reduction kinetics by titanomagnetite (Fe3−xTixO4) nanoparticles
- Author
-
Liu, J., primary, Pearce, C.I., additional, Qafoku, O., additional, Arenholz, E., additional, Heald, S.M., additional, and Rosso, K.M., additional
- Published
- 2012
- Full Text
- View/download PDF
14. Atom Probe and TEM Investigation of Natural Olivines
- Author
-
Arey, B.W., primary, Perera, D., additional, Kovarik, L., additional, Qafoku, O., additional, Felmy, A., additional, and Gorman, B., additional
- Published
- 2012
- Full Text
- View/download PDF
15. Influence of iron redox transformations on plutonium sorption to sediments
- Author
-
Hixon, Amy E., primary, Hu, Yung-Jin, additional, Kaplan, Daniel, additional, Kukkadapu, Ravi K., additional, Nitsche, Heino, additional, Qafoku, O., additional, and Powell, Brian A., additional
- Published
- 2010
- Full Text
- View/download PDF
16. Complexation of Cm(III)/Eu(III) with silicates in basic solutions
- Author
-
Wang, Zheming, primary, Felmy, Andrew R., additional, Xia, Y. X., additional, Qafoku, O., additional, Yantassee, W., additional, and Cho, H., additional
- Published
- 2005
- Full Text
- View/download PDF
17. Rapid Methods to Determine Potentially Mineralizable Nitrogen in Broiler Litter
- Author
-
Qafoku, O. S., primary, Cabrera, M. L., additional, Windham, W. R., additional, and Hill, N. S., additional
- Published
- 2001
- Full Text
- View/download PDF
18. Heterogeneous reduction of 239PuO2 by aqueous Fe(II) in the presence of hematite.
- Author
-
Felmy, A. R., Moore, D. A., Qafoku, O., Buck, E., Conradson, S. D., and Ilton, E. S.
- Subjects
HEMATITE ,FERROUS oxide ,RADIOLYSIS ,PLUTONIUM ,CHEMICAL reduction ,OXIDATION ,THERMODYNAMIC equilibrium - Abstract
The reduction of PuO
2 (am) by Fe(II) in the presence and absence of hematite was studied over a range of pH values and oxidation/reduction potentials. In contrast to thermodynamic predictions, the presence of hematite did not have a major effect on the overall reduction of PuO2 (am) to aqueous Pu(III). Instead the aqueous Pu(III) concentrations at longer time frames were accurately predicted using the measured Fe(II) concentration and existing thermodynamic data for the reaction: H2 O + H+ + Fe2+ + PuO2 (am) ⇌ Pu3+ + Fe(OH)3 (am) with log K =− 0.6. The accuracy of this approach in all solutions containing aqueous Fe(II), coupled with the apparent lack of oxidation of Fe(II) by O2 (g), suggests that the Fe(OH)3 (am) is formed by the oxidation of Fe(II) to Fe(III) by radiolysis. The continued generation of reactive amorphous iron hydroxide by radiolysis prevents thermodynamic equilibrium from being reached with more stable ferric oxide compounds, except possibly under acidic conditions where amorphous ferric hydroxide is soluble. The use of measured pe values, instead of aqueous Fe(II) measurements, also yields reasonable predictions of the final Pu(III) concentrations although the predictions are more uncertain. [ABSTRACT FROM AUTHOR]- Published
- 2013
- Full Text
- View/download PDF
19. Synthesis and properties of titanomagnetite (Fe3− x Ti x O4) nanoparticles: A tunable solid-state Fe(II/III) redox system
- Author
-
Pearce, C.I., Qafoku, O., Liu, J., Arenholz, E., Heald, S.M., Kukkadapu, R.K., Gorski, C.A., Henderson, C.M.B., and Rosso, K.M.
- Subjects
- *
TITANIUM compounds synthesis , *NANOPARTICLE synthesis , *SOLID state chemistry , *OXIDATION-reduction reaction , *SPECTRUM analysis , *DISSOLUTION (Chemistry) - Abstract
Abstract: Titanomagnetite (Fe3− x Ti x O4) nanoparticles were synthesized by room temperature aqueous precipitation, in which Ti(IV) replaces Fe(III) and is charge compensated by conversion of Fe(III) to Fe(II) in the unit cell. A comprehensive suite of tools was used to probe composition, structure, and magnetic properties down to site-occupancy level, emphasizing distribution and accessibility of Fe(II) as a function of x. Synthesis of nanoparticles in the range 0⩽ x ⩽0.6 was attempted; Ti, total Fe and Fe(II) content were verified by chemical analysis. TEM indicated homogeneous spherical 9–12nm particles. μ-XRD and Mössbauer spectroscopy on anoxic aqueous suspensions verified the inverse spinel structure and Ti(IV) incorporation in the unit cell up to x ⩽0.38, based on Fe(II)/Fe(III) ratio deduced from the unit cell edge and Mössbauer spectra. Nanoparticles with a higher value of x possessed a minor amorphous secondary Fe(II)/Ti(IV) phase. XANES/EXAFS indicated Ti(IV) incorporation in the octahedral sublattice (B-site) and proportional increases in Fe(II)/Fe(III) ratio. XA/XMCD indicated that increases arise from increasing B-site Fe(II), and that these charge-balancing equivalents segregate to those B-sites near particle surfaces. Dissolution studies showed that this segregation persists after release of Fe(II) into solution, in amounts systematically proportional to x and thus the Fe(II)/Fe(III) ratio. A mechanistic reaction model was developed entailing mobile B-site Fe(II) supplying a highly interactive surface phase that undergoes interfacial electron transfer with oxidants in solution, sustained by outward Fe(II) migration from particle interiors and concurrent inward migration of charge-balancing cationic vacancies in a ratio of 3:1. [Copyright &y& Elsevier]
- Published
- 2012
- Full Text
- View/download PDF
20. In situ XRD study of Ca2+ saturated montmorillonite (STX-1) exposed to anhydrous and wet supercritical carbon dioxide.
- Author
-
Schaef, H.T., Ilton, E.S., Qafoku, O., Martin, P.F., Felmy, A.R., and Rosso, K.M.
- Subjects
SUPERCRITICAL carbon dioxide ,SMECTITE ,X-ray diffraction ,MONTMORILLONITE ,ANHYDRIDES ,CARBON sequestration - Abstract
Abstract: Reactions involving supercritical carbon dioxide (scCO
2 ) and a calcium saturated dioctahedral smectite (Ca-STX-1) were examined by in situ high-pressure X-ray diffraction over a range of temperatures (50–100°C) and pressures (90, 125, and 180bar) relevant to long-term geologic storage of CO2 . Exposure of Ca-STX-1 containing one water of hydration (1W) to anhydrous scCO2 at 50°C and 90bar produced an immediate increase of ∼0.8Å in the d001 basal reflection that was sustained for the length of the experiment (∼44h). Higher ordered basal reflections displayed similar shifts. Following depressurization, positions of basal reflections and FWHM values (d001 ) returned to initial values, with no measurable modification to the clay structure or water content. Similar results were obtained for tests conducted at 50°C and higher pressures (125 and 180bar). Exposure of Ca-STX-1 containing two waters of hydration (2W) to scCO2 resulted in a decrease in the d001 reflection from 14.48Å to 12.52Å, after pressurization, indicating a partial loss of interlayer water. In addition, the hydration state of the clay became more homogeneous during contact with anhydrous scCO2 and after depressurization. In the presence of scCO2 and water, the clay achieved a 3W hydration state, based on a d001 spacing of 18.8Å. In contrast to scCO2 , comparable testing with N2 gas indicated trivial changes in the d001 series regardless of hydration state (1W or 2W). In the presence of free water and N2 , the basal spacing for the Ca-STX-1 expanded slightly, but remained in the 2W hydration state. The experiments show that potential collapse or expansion of the interlayer spacing depends on the initial hydration state of the clay and scCO2 , where 1W clay is stable but ≥2W layer clay loses water when exposed to anhydrous CO2 . Consequently, the implications of this study depend upon the depth of the caprock. If the caprock is quite deep, then the 1W hydration state is favored and the introduction of dry CO2 could actually help seal the formation. If the caprock is located closer to the surface where 2W or 3W montmorillonite is the predominant form then the introduction of dry CO2 should result in the creation of permeability. Further, these experiments indicate that scCO2 can become intercalated within hydrated clays under conditions proposed for geologic storage of CO2 and act as secondary CO2 traps. [Copyright &y& Elsevier]- Published
- 2012
- Full Text
- View/download PDF
21. Heterogeneous reduction of 239PuO2by aqueous Fe(II) in the presence of hematite
- Author
-
Felmy, A. R., Moore, D. A., Qafoku, O., Buck, E., Conradson, S. D., and Ilton, E. S.
- Abstract
AbstractThe reduction of PuO2(am) by Fe(II) in the presence and absence of hematite was studied over a range of pH values and oxidation/reduction potentials. In contrast to thermodynamic predictions, the presence of hematite did not have a major effect on the overall reduction of PuO2(am) to aqueous Pu(III). Instead the aqueous Pu(III) concentrations at longer time frames were accurately predicted using the measured Fe(II) concentration and existing thermodynamic data for the reaction: H2O + H++ Fe2++ PuO2(am) ⇌ Pu3++ Fe(OH)3(am) with log K=− 0.6. The accuracy of this approach in all solutions containing aqueous Fe(II), coupled with the apparent lack of oxidation of Fe(II) by O2(g), suggests that the Fe(OH)3(am) is formed by the oxidation of Fe(II) to Fe(III) by radiolysis. The continued generation of reactive amorphous iron hydroxide by radiolysis prevents thermodynamic equilibrium from being reached with more stable ferric oxide compounds, except possibly under acidic conditions where amorphous ferric hydroxide is soluble. The use of measured pe values, instead of aqueous Fe(II) measurements, also yields reasonable predictions of the final Pu(III) concentrations although the predictions are more uncertain.
- Published
- 2013
- Full Text
- View/download PDF
22. The effect of ion irradiation on the dissolution of UO2 and UO2-based simulant fuel
- Author
-
Popel, AJ, Wietsma, TW, Engelhard, MH, Lea, AS, Qafoku, O, Grygiel, C, Monnet, I, Ilton, ES, Bowden, ME, and Farnan, I
- Subjects
Simfuel ,Radiation damage ,Ion irradiation ,technology, industry, and agriculture ,Secondary phases ,UO2 ,7. Clean energy ,Dissolution - Abstract
The aim of this work was to study the separate effect of fission fragment damage on the dissolution of simulant UK advanced gas-cooled reactor nuclear fuel in water. Plain UO2 and UO2 samples, doped with inactive fission products to simulate 43 GWd/tU of burn-up, were fabricated. A set of these samples were then irradiated with 92 MeV 129Xe23+ ions to a fluence of 4.8 × 1015 ions/cm2 to simulate the fission damage that occurs within nuclear fuels. The primary effect of the irradiation on the UO2 samples, observed by scanning electron microscopy, was to induce a smoothening of the surface features and formation of hollow blisters, which was attributed to local heating during the ion irradiation. Dissolution experiments were conducted in single-pass flow-through (SPFT) mode under anoxic conditions (< 0.1 O2 ppm in Ar) to study the effect of the induced irradiation damage on the dissolution of the UO2 matrix with data collection capturing six minute intervals for several hours. These time-resolved data showed that the irradiated samples showed a higher initial release of uranium than unirradiated samples, but that the uranium concentrations converged towards ~10-9 mol/l after a few hours. Apart from the initial spike in uranium concentration, attributed to irradiation induced surficial micro-structural changes, no noticeable difference in uranium chemistry as measured by X-ray electron spectroscopy or ‘effective solubility’ was observed between the irradiated, doped and undoped samples in this work. Some secondary phase formation was observed on the surface of UO2 samples after the dissolution experiment.
23. Tc(VII) reduction kinetics by titanomagnetite (Fe3− x Ti x O4) nanoparticles
- Author
-
Liu, J., Pearce, C.I., Qafoku, O., Arenholz, E., Heald, S.M., and Rosso, K.M.
- Subjects
- *
TECHNETIUM isotopes , *CHEMICAL reduction , *CHEMICAL kinetics , *TITANIUM oxides , *NANOPARTICLES , *METAL toxicology , *MAGNETITE - Abstract
Abstract: Technetium contamination remains a major environmental problem at nuclear reprocessing sites, such as at the Hanford nuclear reservation, Washington, USA. Here we investigate the heterogeneous reduction of the highly soluble pertechnetate anion [Tc(VII)O4 −] to sparingly soluble Tc(IV)-bearing solids by a novel and well-characterized set of mixed-valent titanium-doped magnetite nanoparticles, structurally and chemically analogous to titanomagnetites naturally present in Hanford sediments. Titanomagnetite (Fe3− x Ti x O4) nanoparticles (10–12nm) with varying Ti content (0⩽ x ⩽0.53) were synthesized in aqueous suspension. Reaction with 10 and 30μM Tc(VII) solution yielded fast exponentially decaying reduction kinetics with rates that increased with increasing solid-state Fe(II)/Fe(III) ratio in the nanoparticles, a characteristic systematically controlled by the Ti-content. Nanoparticles before and after reduction experiments and surface-associated products of Tc(VII) reduction were characterized using transmission electron microscopy (TEM), X-ray absorption near-edge spectroscopy (XANES), extended X-ray absorption fine structure spectroscopy (EXAFS), micro X-ray diffraction (μ-XRD), X-ray absorption (XA) and X-ray magnetic circular dichroism (XMCD). A mechanistic reaction model was developed involving reduction of Tc(VII) to form Tc(IV)/Fe(III) solids by structural Fe(II) enriched at the nanoparticle surface, a reactive Fe(II) pool that during reaction is resupplied and sustained by outward migration of Fe(II) from the particle interior with concurrent inward migration of charge-balancing cationic vacancies in a ratio of 3:1. The reaction process was quantitatively linked to mass and electron balanced changes in the Fe3− x Ti x O4 nanoparticles, and the accessibility of structural Fe(II) from these phases was determined. [Copyright &y& Elsevier]
- Published
- 2012
- Full Text
- View/download PDF
24. Attenuation of Cr(IV) by Hanford Sediments Under Hyperalkaline and Saline Conditions
- Author
-
Qafoku, O
- Published
- 2001
25. Characterization of natural titanomagnetites (Fe3− x Ti x O4) for studying heterogeneous electron transfer to Tc(VII) in the Hanford subsurface.
- Author
-
Pearce, C.I., Liu, J., Baer, D.R., Qafoku, O., Heald, S.M., Arenholz, E., Grosz, A.E., McKinley, J.P., Resch, C.T., Bowden, M.E., Engelhard, M.H., and Rosso, K.M.
- Subjects
- *
CHARGE exchange , *MAGNETITE , *POLLUTANTS , *MAGNETIC separation , *TRANSITION metals , *X-ray photoelectron spectroscopy ,HANFORD Site (Wash.) - Abstract
Abstract: Sediments with basaltic provenance, such as those at the Hanford nuclear reservation, Washington, USA, are rich in Fe-bearing minerals of mixed valence. These minerals are redox reactive with aqueous O2 or Fe(II), and have the potential to react with important environmental contaminants including Tc. Here we isolate, identify and characterize natural Fe(II)/Fe(III)-bearing microparticles from Hanford sediments, develop synthetic analogues and investigate their batch redox reactivity with aqueous Tc(VII). Natural Fe-rich mineral samples were isolated by magnetic separation from sediments collected at several locations on Hanford’s central plateau. This magnetic mineral fraction was found to represent up to 1wt% of the total sediment, and be composed of 90% magnetite with minor ilmenite and hematite, as determined by X-ray diffraction. The magnetite contained variable amounts of transition metals consistent with alio- and isovalent metal substitutions for Fe. X-ray microprobe analysis showed that Ti was the most significant substituent, and that these grains could be described with the titanomagnetite formula Fe3− x Ti x O4, which falls between endmember magnetite (x =0) and ulvöspinel (x =1). The dominant composition was determined to be x =0.15 by chemical analysis and electron probe microanalysis in the bulk, and by L-edge X-ray absorption spectroscopy and X-ray photoelectron spectroscopy at the surface. Site-level characterization of the titanomagnetites by X-ray magnetic circular dichroism showed that despite native oxidation, octahedral Fe(II) was detectable within 5nm of the mineral surface. By testing the effect of contact with oxic Hanford and Ringold groundwaters to reduced Ringold groundwater, it was found that the concentration of this near-surface structural Fe(II) was strongly dependent on aqueous redox condition. This highlights the potential for restoring reducing equivalents and thus reduction capacity to oxidized Fe-mineral surfaces through redox cycling in the natural environment. Reaction of these magnetically-separated natural phases from Hanford sediments with a solution containing 10μM Tc(VII) showed that they were able to reductively immobilize Tc(VII) with concurrent oxidation of Fe(II) to Fe(III) at the mineral surface, as were synthetic x =0.15 microparticle and nanoparticle analogue phases. When differences in the particle surface area to solution volume ratio were taken into consideration, measured Tc(VII) reduction rates for Fe3− x Ti x O4 (x =0.15) natural material, synthetic bulk powder and nanoparticles scaled systematically, suggesting possible utility for comprehensive batch and flow reactivity studies. [Copyright &y& Elsevier]
- Published
- 2014
- Full Text
- View/download PDF
26. Cancrinite and sodalite formation in the presence of cesium, potassium, magnesium, calcium and strontium in Hanford tank waste simulants
- Author
-
Qafoku, O
- Published
- 2006
- Full Text
- View/download PDF
27. Spectral induced polarization of corrosion of sulfur modified Iron in sediments.
- Author
-
Emerson HP, Szecsody JE, Halter C, Robinson JL, Thomle JN, Bowden ME, Qafoku O, Resch CT, Slater LD, and Freedman VL
- Subjects
- Corrosion, Water Pollutants, Chemical chemistry, Environmental Monitoring methods, Geologic Sediments chemistry, Iron chemistry, Sulfur chemistry
- Abstract
Spectral induced polarization (SIP) responses are not well understood within the context of remediation applications at contaminated sites. Systematic SIP studies are needed to gain further insights into the complex electrical response of dynamic, biogeochemical states to enable the use of SIP for subsurface site characterization and remediation monitoring. Although SIP measurements on zero valent iron have been previously published, the SIP response for sulfur modified iron (SMI), a similar potential subsurface reductive amendment, has not yet been reported. Hence, the purpose of this laboratory-scale study was to evaluate SIP for nonintrusive monitoring of SMI under relevant subsurface conditions. SMI was separately mixed with silica sand or sediments from the Hanford Site (Washington, USA) and then packed into columns for geochemical and SIP analysis for up to 77 days under fully saturated conditions. SMI exhibited distinguishable phase peaks between 0.1 and 1.0 Hz, which changed in magnitude based on content and were detected as low as 0.3 wt%. In the initial days, the complex conductivity, phase maxima, and chargeability increased while the peak locations shifted to higher frequency (decreasing relaxation times), suggesting an initial increase in polarization and concurrent decrease in the length scales (potentially due to changes in particle size and mineralogy). Then, after 77 days, the phase maxima and chargeability decreased with a concurrent increase in relaxation times, suggesting that over longer periods, less polarizable phases are forming and particle size or connectivity of polarizable phases is increasing. These results demonstrated a unique SIP response to SMI transformations that might be applied to monitoring of SMI emplaced as a subsurface barrier or injected in the field., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Published by Elsevier B.V.)
- Published
- 2024
- Full Text
- View/download PDF
28. Emerging sensing, imaging, and computational technologies to scale nano-to macroscale rhizosphere dynamics - Review and research perspectives.
- Author
-
Ahkami AH, Qafoku O, Roose T, Mou Q, Lu Y, Cardon ZG, Wu Y, Chou C, Fisher JB, Varga T, Handakumbura P, Aufrecht JA, Bhattacharjee A, and Moran JJ
- Abstract
The soil region influenced by plant roots, i.e., the rhizosphere, is one of the most complex biological habitats on Earth and significantly impacts global carbon flow and transformation. Understanding the structure and function of the rhizosphere is critically important for maintaining sustainable plant ecosystem services, designing engineered ecosystems for long-term soil carbon storage, and mitigating the effects of climate change. However, studying the biological and ecological processes and interactions in the rhizosphere requires advanced integrated technologies capable of decoding such a complex system at different scales. Here, we review how emerging approaches in sensing, imaging, and computational modeling can advance our understanding of the complex rhizosphere system. Particularly, we provide our perspectives and discuss future directions in developing in situ rhizosphere sensing technologies that could potentially correlate local-scale interactions to ecosystem scale impacts. We first review integrated multimodal imaging techniques for tracking inorganic elements and organic carbon flow at nano- to microscale in the rhizosphere, followed by a discussion on the use of synthetic soil and plant habitats that bridge laboratory-to-field studies on the rhizosphere processes. We then describe applications of genetically encoded biosensors in monitoring nutrient and chemical exchanges in the rhizosphere, and the novel nanotechnology-mediated delivery approaches for introducing biosensors into the root tissues. Next, we review the recent progress and express our vision on field-deployable sensing technologies such as planar optodes for quantifying the distribution of chemical and analyte gradients in the rhizosphere under field conditions. Moreover, we provide perspectives on the challenges of linking complex rhizosphere interactions to ecosystem sensing for detecting biological traits across scales, which arguably requires using the best-available model predictions including the model-experiment and image-based modeling approaches. Experimental platforms relevant to field conditions like SMART (Sensors at Mesoscales with Advanced Remote Telemetry) soils testbed, coupled with ecosystem sensing and predictive models, can be effective tools to explore coupled ecosystem behavior and responses to environmental perturbations. Finally, we envision that with the advent of novel high-resolution imaging capabilities at nano- to macroscale, and remote biosensing technologies, combined with advanced computational models, future studies will lead to detection and upscaling of rhizosphere processes toward ecosystem and global predictions.
- Published
- 2024
- Full Text
- View/download PDF
29. Fungal organic acid uptake of mineral-derived K is dependent on distance from carbon hotspot.
- Author
-
Bhattacharjee A, Velickovic D, Richardson JA, Couvillion SP, Vandergrift GW, Qafoku O, Taylor MJ, Jansson JK, Hofmockel K, and Anderton CR
- Subjects
- Minerals, Hyphae, Soil, Soil Microbiology, Ecosystem, Carbon
- Abstract
Importance: Fungal species are foundational members of soil ecosystems with vital contributions that support interspecies resource translocation. The minute details of these biogeochemical processes are poorly investigated. Here, we addressed this knowledge gap by probing fungal growth in a novel mineral-doped soil micromodel platform using spatially-resolved imaging methodologies. We found that fungi uptake K from K-rich minerals using organic acids exuded in a distance-dependent manner from a carbon-rich hotspot. While identification of specific mechanisms within soil remains challenging, our findings demonstrate the significance of reduced complexity platforms such as the mineral-doped micromodel in probing biogeochemical processes. These findings provide visualization into hyphal uptake and transport of mineral-derived nutrients in a resource-limited environment., Competing Interests: The authors declare no conflict of interest.
- Published
- 2023
- Full Text
- View/download PDF
30. Accumulation mechanisms for contaminants on weak-base hybrid ion exchange resins.
- Author
-
Saslow SA, Cordova EA, Escobedo NM, Qafoku O, Bowden ME, Resch CT, Lahiri N, Nienhuis ET, Boglaienko D, Levitskaia TG, Meyers P, Hager JR, Emerson HP, Pearce CI, and Freedman VL
- Abstract
Mechanism of hexavalent chromium removal (Cr(VI) as CrO
4 2- ) by the weak-base ion exchange (IX) resin ResinTech® SIR-700-HP (SIR-700) from simulated groundwater is assessed in the presence of radioactive contaminants iodine-129 (as IO3 - ), uranium (U as uranyl UO2 2+ ), and technetium-99 (as TcO4 - ), and common environmental anions sulfate (SO4 2- ) and chloride (Cl- ). Batch tests using the acid sulfate form of SIR-700 demonstrated Cr(VI) and U(VI) removal exceeded 97%, except in the presence of high SO4 at secondary alcohol sites. Tc(VII)O2- and I(V)O4 2- at the protonated amine sites. These U-SO4 2- complexes are integral to U(VI) removal, as confirmed by the decrease in U(VI) removal (<40%) when the acid chloride form of SIR-700 was used instead. Solid phase characterization revealed that CrO4 2- is removed by IX with SO4 2- complexes and/or reduced to amorphous Cr(III)(OH)3 at secondary alcohol sites. Tc(VII)O4 - and I(V)O3 - also undergo chemical reduction, following a similar removal mechanism. Oxyanion removal preference is determined by the anion reduction potential (CrO4 2- >TcO4 - >IO3 - ), geometry, and charge density. For these reasons, 39% and 69% of TcO4 - and 17% and 39% of IO3 - are removed in the presence and absence of Cr(VI), respectively., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Battelle Memorial Institute. Published by Elsevier B.V. All rights reserved.)- Published
- 2023
- Full Text
- View/download PDF
31. Novel Focused Ion Beam Liftouts for Spatial Characterization of Spherical Biominerals With Transmission Electron Microscopy.
- Author
-
Zambare N, Arey B, Qafoku O, Koirala KP, Kovarik L, and Dohnalkova A
- Abstract
Focused ion beam (FIB) is frequently used to prepare electron- and X-ray-beam-transparent thin sections of samples, called lamellae. Typically, lamellae are prepared from only a subregion of a sample. In this paper, we present a novel approach for FIB lamella preparation of microscopic samples, wherein the entire cross-section of the whole sample can be investigated. The approach was demonstrated using spherical, porous, and often hollow microprecipitates of biologically precipitated calcium carbonate. The microprecipitate morphology made these biogenic samples more fragile and challenging than materials commonly investigated using FIB lamellae. Our method enables the appropriate orientation of the lamellae required for further electron/X-ray analyses after attachment to the transmission electron microscopy (TEM) grid post and facilitates more secure adhesion onto the grid post. We present evidence of autofluorescence in bacterially precipitated vaterite using this lamella preparation method coupled with TEM selected area diffraction. This innovative approach allows studying biomineralization at the micro to nano scales, which can provide novel insights into bacterial responses to microenvironmental conditions., Competing Interests: Conflict of Interest The authors declare that they have no competing interest., (© The Author(s) 2023. Published by Oxford University Press on behalf of the Microscopy Society of America.)
- Published
- 2023
- Full Text
- View/download PDF
32. Structure and composition of natural ferrihydrite nano-colloids in anoxic groundwater.
- Author
-
Engel M, Noël V, Pierce S, Kovarik L, Kukkadapu RK, Pacheco JSL, Qafoku O, Runyon JR, Chorover J, Zhou W, Cliff J, Boye K, and Bargar JR
- Subjects
- Ferric Compounds, Soil, Colloids chemistry, Oxidation-Reduction, Minerals chemistry, Iron chemistry, Groundwater chemistry
- Abstract
Fe-rich mobile colloids play vital yet poorly understood roles in the biogeochemical cycling of Fe in groundwater by influencing organic matter (OM) preservation and fluxes of Fe, OM, and other essential (micro-)nutrients. Yet, few studies have provided molecular detail on the structures and compositions of Fe-rich mobile colloids and factors controlling their persistence in natural groundwater. Here, we provide comprehensive new information on the sizes, molecular structures, and compositions of Fe-rich mobile colloids that accounted for up to 72% of aqueous Fe in anoxic groundwater from a redox-active floodplain. The mobile colloids are multi-phase assemblages consisting of Si-coated ferrihydrite nanoparticles and Fe(II)-OM complexes. Ferrihydrite nanoparticles persisted under both oxic and anoxic conditions, which we attribute to passivation by Si and OM. These findings suggest that mobile Fe-rich colloids generated in floodplains can persist during transport through redox-variable soils and could be discharged to surface waters. These results shed new light on their potential to transport Fe, OM, and nutrients across terrestrial-aquatic interfaces., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023. Published by Elsevier Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
33. Nanoscale characterization of the sequestration and transformation of silver and arsenic in soil organic matter using atom probe tomography and transmission electron microscopy.
- Author
-
Akbari Alavijeh M, Schindler M, Wirth MG, Qafoku O, Kovarik L, and Perea DE
- Subjects
- Silver analysis, Soil chemistry, Microscopy, Electron, Transmission, Oxides, Sulfides chemistry, Metal Nanoparticles, Arsenic
- Abstract
This study investigates the sequestration and transformation of silver (Ag) and arsenic (As) ions in soil organic matter (OM) at the nanoscale using the combination of atom probe tomography (APT), transmission electron microscopy (TEM), focused ion beam (FIB), ion mill thinning and scanning electron microscopy (SEM). Silver-arsenic contaminated organic-rich soils were collected along the shore of Cobalt Lake, a former mining and milling site of the famous Ag deposits at Cobalt, Ontario, Canada. SEM examinations show that particulate organic matter (OM grains) contains mineral inclusions composed of mainly Fe, S, and Si with minor As and traces of Ag. Four OM grains with detectable concentrations of Ag (by SEM-EDS) were further characterized with either a combination of TEM and APT or TEM alone. These examinations show that As is predominantly sequestered by OM through either co-precipitation with Fe-(hydr)oxide inclusions or adsorption on Fe-(hydr)oxides and their subsequent transformation into scorodite (FeAsO
4 ·2H2 O)/amorphous Fe-arsenate (AFA). Silver nanoparticles (NPs) with diameters in the range of ∼5-20 nm occur in the organic matrix as well as on the surface of Fe-rich inclusions (Fe-hydroxides, Fe-arsenates, Fe-sulfides), whereas Ag sulfide NPs were only observed on the surfaces of the Fe-rich inclusions. Rims of Ag-sulfides on Ag NPs (TEM data), accumulation of S atoms within and around Ag NPs (APT data), and the occurrence of dendritic as well as euhedral acanthite NPs with diameters in the range of ∼100-400 nm (TEM data) indicate that the sulfidation of the Ag NPs occurred via a mineral-replacement reaction (rims) or a complete dissolution of the Ag NPs, the subsequent precipitation of acanthite NPs and their aggregation (dendrites) and Ostwald ripening (euhedral crystals). These results show the importance of OM and, specifically the mineral inclusions in the sequestration of Ag and As to less bioavailable forms such as acanthite and scorodite, respectively.- Published
- 2023
- Full Text
- View/download PDF
34. A Mineral-Doped Micromodel Platform Demonstrates Fungal Bridging of Carbon Hot Spots and Hyphal Transport of Mineral-Derived Nutrients.
- Author
-
Bhattacharjee A, Qafoku O, Richardson JA, Anderson LN, Schwarz K, Bramer LM, Lomas GX, Orton DJ, Zhu Z, Engelhard MH, Bowden ME, Nelson WC, Jumpponen A, Jansson JK, Hofmockel KS, and Anderton CR
- Subjects
- Minerals analysis, Potassium analysis, Soil chemistry, Hyphae chemistry, Mycorrhizae chemistry
- Abstract
Soil fungi facilitate the translocation of inorganic nutrients from soil minerals to other microorganisms and plants. This ability is particularly advantageous in impoverished soils because fungal mycelial networks can bridge otherwise spatially disconnected and inaccessible nutrient hot spots. However, the molecular mechanisms underlying fungal mineral weathering and transport through soil remains poorly understood primarily due to the lack of a platform for spatially resolved analysis of biotic-driven mineral weathering. Here, we addressed this knowledge gap by demonstrating a mineral-doped soil micromodel platform where mineral weathering mechanisms can be studied. We directly visualize acquisition and transport of inorganic nutrients from minerals through fungal hyphae in the micromodel using a multimodal imaging approach. We found that Fusarium sp. strain DS 682, a representative of common saprotrophic soil fungus, exhibited a mechanosensory response (thigmotropism) around obstacles and through pore spaces (~12 μm) in the presence of minerals. The fungus incorporated and translocated potassium (K) from K-rich mineral interfaces, as evidenced by visualization of mineral-derived nutrient transport and unique K chemical moieties following fungus-induced mineral weathering. Specific membrane transport proteins were expressed in the fungus in the presence of minerals, including those involved in oxidative phosphorylation pathways and the transmembrane transport of small-molecular-weight organic acids. This study establishes the significance of a spatial visualization platform for investigating microbial induced mineral weathering at microbially relevant scales. Moreover, we demonstrate the importance of fungal biology and nutrient translocation in maintaining fungal growth under water and carbon limitations in a reduced-complexity soil-like microenvironment. IMPORTANCE Fungal species are foundational members of soil microbiomes, where their contributions in accessing and transporting vital nutrients is key for community resilience. To date, the molecular mechanisms underlying fungal mineral weathering and nutrient translocation in low-nutrient environments remain poorly resolved due to the lack of a platform for spatial analysis of biotic weathering processes. Here, we addressed this knowledge gap by developing a mineral-doped soil micromodel platform. We demonstrate the function of this platform by directly probing fungal growth using spatially resolved optical and chemical imaging methodologies. We found the presence of minerals was required for fungal thigmotropism around obstacles and through soil-like pore spaces, and this was related to fungal transport of potassium (K) and corresponding K speciation from K-rich minerals. These findings provide new evidence and visualization into hyphal transport of mineral-derived nutrients under nutrient and water stresses.
- Published
- 2022
- Full Text
- View/download PDF
35. Atom probe tomography and transmission electron microscopy: a powerful combination to characterize the speciation and distribution of Cu in organic matter.
- Author
-
Jadoon S, Schindler M, Wirth MG, Qafoku O, Kovarik L, and Perea DE
- Subjects
- Metals, Microscopy, Electron, Transmission, Silicon Dioxide, Tomography, Copper analysis, Soil chemistry, Soil Pollutants analysis
- Abstract
The large surface areas in porous organic matter (OM) and on the surface of altered minerals control the sequestration of metal(loid)s in contaminated soils and sediments. This study explores the sequestration of Cu by OM in surficial forest soil in close proximity to the Horne smelter, Rouyn-Noranda, Quebec, Canada. The organic-rich soils have elevated concentrations of Cu (Cu = 〈0.75〉 wt%) but lack associations between organic matter (OM) and Cu-sulfides, commonly observed in organic-rich Cu-contaminated soils. This provides a unique opportunity to study the sequestration of Cu by OM in a sulfur-depleted environment using a combination of scanning electron microscopy (SEM), transmission electron microscopy (TEM) and atom probe tomography (APT). In two examined OM particles, Cu is predominantly sequestered as (I) nano- to micrometer-size Cu-bearing spinels, (II) as cuprite (Cu
2 O) nanoparticles or (III) finely dispersed Cu in association with clusters of magnetite (Fe3 O4 ) nanoparticles embedded in amorphous silica-rich pockets and (IV) in the OM matrix. The occurrence of euhedral crystals and nanoparticles in the single-digit range within the OM matrix indicate that the majority of the nanoparticles formed in situ within the OM particles. A model is developed which proposes that the sequestration of Cu in OM is promoted by (I) the partial mineralization of the OM matrix by amorphous silica; (II) the nucleation of magnetite nanoparticles on highly reactive silanol groups; (III) the diffusion of Cu within mineralized and altered areas of the OM; (IV) the availability of Cu-bearing species, which in turn is controlled by the hydrodynamic properties of the pore channels; (V) the formation of precursors and nucleation of Cu-bearing nanoparticles. This study shows that the combination of SEM, TEM and APT provides new insights into the sequestration of metal contaminants by OM at various scales ranging from the single-digit nano- to micrometer scale.- Published
- 2022
- Full Text
- View/download PDF
36. Fungal hyphae develop where titanomagnetite inclusions reach the surface of basalt grains.
- Author
-
Lybrand RA, Qafoku O, Bowden ME, Hochella MF Jr, Kovarik L, Perea DE, Qafoku NP, Schroeder PA, Wirth MG, and Zaharescu DG
- Subjects
- Forests, Soil, Hyphae metabolism, Silicates metabolism
- Abstract
Nutrient foraging by fungi weathers rocks by mechanical and biochemical processes. Distinguishing fungal-driven transformation from abiotic mechanisms in soil remains a challenge due to complexities within natural field environments. We examined the role of fungal hyphae in the incipient weathering of granulated basalt from a three-year field experiment in a mixed hardwood-pine forest (S. Carolina) to identify alteration at the nanometer to micron scales based on microscopy-tomography analyses. Investigations of fungal-grain contacts revealed (i) a hypha-biofilm-basaltic glass interface coinciding with titanomagnetite inclusions exposed on the grain surface and embedded in the glass matrix and (ii) native dendritic and subhedral titanomagnetite inclusions in the upper 1-2 µm of the grain surface that spanned the length of the fungal-grain interface. We provide evidence of submicron basaltic glass dissolution occurring at a fungal-grain contact in a soil field setting. An example of how fungal-mediated weathering can be distinguished from abiotic mechanisms in the field was demonstrated by observing hyphal selective occupation and hydrolysis of glass-titanomagnetite surfaces. We hypothesize that the fungi were drawn to basaltic glass-titanomagnetite boundaries given that titanomagnetite exposed on or very near grain surfaces represents a source of iron to microbes. Furthermore, glass is energetically favorable to weathering in the presence of titanomagnetite. Our observations demonstrate that fungi interact with and transform basaltic substrates over a three-year time scale in field environments, which is central to understanding the rates and pathways of biogeochemical reactions related to nuclear waste disposal, geologic carbon storage, nutrient cycling, cultural artifact preservation, and soil-formation processes., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
37. In situ imaging of amorphous intermediates during brucite carbonation in supercritical CO 2 .
- Author
-
Zhang X, Lea AS, Chaka AM, Loring JS, Mergelsberg ST, Nakouzi E, Qafoku O, De Yoreo JJ, Schaef HT, and Rosso KM
- Subjects
- Carbonates, Temperature, Water chemistry, Carbon Dioxide chemistry, Magnesium Hydroxide chemistry
- Abstract
Progress in understanding crystallization pathways depends on the ability to unravel relationships between intermediates and final crystalline products at the nanoscale, which is a particular challenge at elevated pressure and temperature. Here we exploit a high-pressure atomic force microscope to directly visualize brucite carbonation in water-bearing supercritical carbon dioxide (scCO
2 ) at 90 bar and 50 °C. On introduction of water-saturated scCO2 , in situ visualization revealed initial dissolution followed by nanoparticle nucleation consistent with amorphous magnesium carbonate (AMC) on the surface. This is followed by growth of nesquehonite (MgCO3 ·3H2 O) crystallites. In situ imaging provided direct evidence that the AMC intermediate acts as a seed for crystallization of nesquehonite. In situ infrared and thermogravimetric-mass spectrometry indicate that the stoichiometry of AMC is MgCO3 ·xH2 O (x = 0.5-1.0), while its structure is indicated to be hydromagnesite-like according to density functional theory and X-ray pair distribution function analysis. Our findings thus provide insight for understanding the stability, lifetime and role of amorphous intermediates in natural and synthetic systems., (© 2021. The Author(s), under exclusive licence to Springer Nature Limited.)- Published
- 2022
- Full Text
- View/download PDF
38. Enhanced Transport of TiO 2 in Unsaturated Sand and Soil after Release from Biodegradable Plastic during Composting.
- Author
-
Yu Y, Sintim HY, Astner AF, Hayes DG, Bary A, Zelenyuk A, Qafoku O, Kovarik L, and Flury M
- Subjects
- Plastics, Sand, Soil, Titanium, Biodegradable Plastics, Composting
- Abstract
Biodegradable plastics can reach full degradation when disposed of appropriately and thus alleviate plastic pollution caused by conventional plastics. However, additives can be released into the environment during degradation and the fate of these additives can be affected by the degradation process. Here, we characterized TiO
2 particles released from a biodegradable plastic mulch during composting and studied the transport of the mulch-released TiO2 particles in inert sand and agricultural soil columns under unsaturated flow conditions. TiO2 particles (238 nm major axis and 154 nm minor axis) were released from the biodegradable plastic mulch in both single-particle and cluster forms. The mulch-released TiO2 particles were fully retained in unsaturated soil columns due to attachment onto the solid-water interface and straining. However, in unsaturated sand columns, the mulch-released TiO2 particles were highly mobile. A comparison with the pristine TiO2 revealed that the mobility of the mulch-released TiO2 particles was enhanced by humic acid present in the compost residues, which blocked attachment sites and imposed steric repulsion. This study demonstrates that TiO2 particles can be released during composting of biodegradable plastics and the transport potential of the plastic-released TiO2 particles in the terrestrial environment can be enhanced by compost residues.- Published
- 2022
- Full Text
- View/download PDF
39. Cluster defects in gibbsite nanoplates grown at acidic to neutral pH.
- Author
-
Mergelsberg ST, Dembowski M, Bowden ME, Graham TR, Prange M, Wang HW, Zhang X, Qafoku O, Rosso KM, and Pearce CI
- Abstract
Gibbsite [α-Al(OH)
3 ] is the solubility limiting phase for aluminum across a wide pH range, and it is a common mineral phase with many industrial applications. The growth mechanism of this layered-structure material, however, remains incompletely understood. Synthesis of gibbsite at low to circumneutral pH yields nanoplates with substantial interlayer disorder. Here we examine defects in this material in detail, and the effects of recrystallization in highly alkaline sodium hydroxide solution at 80 °C. We employed a multimodal approach, including scanning electron microscopy, magic-angle spinning nuclear magnetic resonance (MAS-NMR), Raman and infrared spectroscopies, X-ray diffraction (XRD), and X-ray total scattering pair distribution function (XPDF) analysis to characterize the ageing of the nanoplates over several days. XRD and XPDF indicate that gibbsite nanoplates precipitated at circumneutral pH contain dense, truncated sheets imparting a local difference in interlayer distance. These interlayer defects appear well described by flat Al13 aluminum hydroxide nanoclusters nearly isostructural with gibbsite sheets present under synthesis conditions and trapped as interlayer inclusions during growth. Ageing at elevated temperature in alkaline solutions gradually improves crystallinity, showing a gradual increase in H-bonding between interlayer OH groups. Between 7 to 8 vol% of the initial gibbsite nanoparticles exhibit this defect, with the majority of differences disappearing after 2-4 hours of recrystallization in alkaline solution. The results not only identify the source of disorder in gibbsite formed under acidic/neutral conditions but also point to a possible cluster-mediated growth mechanism evident through inclusion of relict oligomers with gibbsite-like topology trapped in the interlayer spaces.- Published
- 2021
- Full Text
- View/download PDF
40. Atomic Force Microscopy and Infrared Nanospectroscopy of COVID-19 Spike Protein for the Quantification of Adhesion to Common Surfaces.
- Author
-
O'Callahan B, Qafoku O, Balema V, Negrete OA, Passian A, Engelhard MH, and Waters KM
- Subjects
- Humans, Microscopy, Atomic Force, Pandemics, SARS-CoV-2, Spike Glycoprotein, Coronavirus, Surface Properties, COVID-19
- Abstract
The COVID-19 pandemic has claimed millions of lives worldwide, sickened many more, and has resulted in severe socioeconomic consequences. As society returns to normal, understanding the spread and persistence of SARS CoV-2 on commonplace surfaces can help to mitigate future outbreaks of coronaviruses and other pathogens. We hypothesize that such an understanding can be aided by studying the binding and interaction of viral proteins with nonbiological surfaces. Here, we propose a methodology for investigating the adhesion of the SARS CoV-2 spike glycoprotein on common inorganic surfaces such as aluminum, copper, iron, silica, and ceria oxides as well as metallic gold. Quantitative adhesion was obtained from the analysis of measured forces at the nanoscale using an atomic force microscope operated under ambient conditions. Without imposing further constraints on the measurement conditions, our preliminary findings suggest that spike glycoproteins interact with similar adhesion forces across the majority of the metal oxides tested with the exception to gold, for which attraction forces ∼10 times stronger than all other materials studied were observed. Ferritin, which was used as a reference protein, was found to exhibit similar adhesion forces as SARS CoV-2 spike protein. This study results show that glycoprotein adhesion forces for similar ambient humidity, tip shape, and contact surface are nonspecific to the properties of metal oxide surfaces, which are expected to be covered by a thin water film. The findings suggest that under ambient conditions, glycoprotein adhesion to metal oxides is primarily controlled by the water capillary forces, and they depend on the surface tension of the liquid water. We discuss further strategies warranted to decipher the intricate nanoscale forces for improved quantification of the adhesion.
- Published
- 2021
- Full Text
- View/download PDF
41. Simultaneous immobilization of aqueous co-contaminants using a bismuth layered material.
- Author
-
Lawter AR, Levitskaia TG, Qafoku O, Bowden ME, Colon FC, and Qafoku NP
- Subjects
- Bismuth, Groundwater, Radiation Monitoring, Water Pollutants, Radioactive analysis
- Abstract
The remediation of co-located contaminants in the vadose zone can be challenging due to accessibility and responses of different contaminants to remedial actions. At the Hanford Site (WA, USA), multiple radionuclides and other hazardous contaminants are present in the vadose zone and groundwater, including iodine-129 (I), technetium-99 (Tc), uranium-238 (U), chromium (Cr), and nitrate (NO
3 - ). We evaluated a layered Bi oxyhydroxide material for its potential to remove individual and co-located contaminants with a series of batch experiments that investigated a range of plume conditions, followed by solid phase characterization of the reacted bismuth material. The results demonstrated successful removal of four contaminants (>98% removal of I, Tc, U, and Cr from the aqueous phase after 30 days) when tested individually. When contaminants were combined, a slight decrease in Tc removal occurred (-6%p). The addition of sediment decreased the removal for Tc and I, but U and Cr removal was unaffected. The results of these batch tests demonstrated that the bismuth based oxy-hydroxide material is a promising material for sequestering multiple contaminants in situ., (Copyright © 2021 Elsevier Ltd. All rights reserved.)- Published
- 2021
- Full Text
- View/download PDF
42. Synergistic Coupling of CO 2 and H 2 O during Expansion of Clays in Supercritical CO 2 -CH 4 Fluid Mixtures.
- Author
-
Loring JS, Qafoku O, Thompson CJ, McNeill AS, Vasiliu M, Dixon DA, Miller QRS, McGrail BP, Rosso KM, Ilton ES, and Schaef HT
- Abstract
We used IR and XRD, with supporting theoretical calculations, to investigate the swelling behavior of Na
+ -, NH4 + -, and Cs+ O, CO2 O, CO2 , and CH4 O facilitated CO2 O facilitated CO2 intercalation at relatively low RH, here we show that increasing CO2 /CH4 O intercalation and swelling of the Na-clay at progressively lower RH. In contrast to the Na-clay, CO2 O intercalation and swelling of the Na-clay at progressively lower RH. In contrast to the Na-clay, CO2 O, while increasing fluid CO2 O, while increasing fluid CO2 /CH4 O intercalation. The NH2 O intercalation. The NH4 O intercalated in the Cs-, NH2 O intercalated in the Cs-, NH4 -, and Na-clays, we posit that CO2 facilitated expansion of the Na-clay by participating in outer-sphere solvation of Na+ O. In no case did the pure CH2 O. In no case did the pure CH4 fluid induce expansion. Our experimental data can benchmark modeling studies aimed at predicting clay expansion in humidified fluids with varying ratios of CO2 and CH4 in real reservoir systems with implications for enhanced hydrocarbon recovery and CO2 storage in subsurface environments.- Published
- 2021
- Full Text
- View/download PDF
43. Microbe-Encapsulated Silica Gel Biosorbents for Selective Extraction of Scandium from Coal Byproducts.
- Author
-
Dong Z, Deblonde G, Middleton A, Hu D, Dohnalkova A, Kovarik L, Qafoku O, Shutthanandan V, Jin H, Hsu-Kim H, Theaker N, Jiao Y, and Park D
- Subjects
- Adsorption, Ferric Compounds, Hydrogen-Ion Concentration, Kinetics, Micrococcaceae, Scandium, Silica Gel, Coal, Water Pollutants, Chemical
- Abstract
Scandium (Sc) has great potential for use in aerospace and clean energy applications, but its supply is currently limited by a lack of commercially viable deposits and the environmental burden of its production. In this work, a biosorption-based flow-through process was developed for extraction of Sc from low-grade feedstocks. A microbe-encapsulated silica gel (MESG) biosorbent was synthesized through sol-gel encapsulation of Arthrobacter nicotianae , a bacterium that selectively adsorbs Sc. Microscopic imaging revealed a high cell loading and macroporous structure, which enabled rapid mass transport and adsorption/desorption of metal ions. The biosorbent displayed high Sc selectivity against lanthanides and major base metals, with the exception of Fe(III). Following pH adjustment to remove Fe(III) from an acid leachate prepared from lignite coal, a packed-bed column loaded with the MESG biosorbent exhibited near-complete Sc separation from lanthanides; the column eluate had a Sc enrichment factor of 10.9, with Sc constituting 96.4% of the total rare earth elements. The MESG biosorbent exhibited no significant degradation with regard to both adsorption capacity and physical structure after 10 adsorption/desorption cycles. Overall, our results suggest that the MESG biosorbent offers an effective and green alternative to conventional liquid-liquid extraction for Sc recovery.
- Published
- 2021
- Full Text
- View/download PDF
44. Low temperature and limited water activity reveal a pathway to magnesite via amorphous magnesium carbonate.
- Author
-
Mergelsberg ST, Kerisit SN, Ilton ES, Qafoku O, Thompson CJ, and Loring JS
- Abstract
Forsterite carbonated in thin H2O films to magnesite via amorphous magnesium carbonate during reaction with H2O-bearing liquid CO2 at 25 °C. This novel reaction pathway contrasts with previous studies that were carried out at higher H2O activity and temperature, where more highly hydrated nesquehonite was the metastable intermediate.
- Published
- 2020
- Full Text
- View/download PDF
45. Hybrid Sorbents for 129 I Capture from Contaminated Groundwater.
- Author
-
Cordova EA, Garayburu-Caruso V, Pearce CI, Cantrell KJ, Morad JW, Gillispie EC, Riley BJ, Colon FC, Levitskaia TG, Saslow SA, Qafoku O, Resch CT, Rigali MJ, Szecsody JE, Heald SM, Balasubramanian M, Meyers P, and Freedman VL
- Abstract
Radioiodine (
129 I) poses a risk to the environment due to its long half-life, toxicity, and mobility. It is found at the U.S. Department of Energy Hanford Site due to legacy releases of nuclear wastes to the subsurface where129 I is predominantly present as iodate (IO3 - ). To date, a cost-effective and scalable cleanup technology for129 I has not been identified, with hydraulic containment implemented as the remedial approach. Here, novel high-performing sorbents for129 I remediation with the capacity to reduce129 I concentrations to or below the US Environmental Protection Agency (EPA) drinking water standard and procedures to deploy them in an ex-situ pump and treat (P&T) system are introduced. This includes implementation of hybridized polyacrylonitrile (PAN) beads for ex-situ remediation of IO3 - -contaminated groundwater for the first time. Iron (Fe) oxyhydroxide and bismuth (Bi) oxyhydroxide sorbents were deployed on silica substrates or encapsulated in porous PAN beads. In addition, Fe-, cerium (Ce)-, and Bi-oxyhydroxides were encapsulated with anion-exchange resins. The PAN-bismuth oxyhydroxide and PAN-ferrihydrite composites along with Fe- and Ce-based hybrid anion-exchange resins performed well in batch sorption experiments with distribution coefficients for IO3 - of >1000 mL/g and rapid removal kinetics. Of the tested materials, the Ce-based hybrid anion-exchange resin was the most efficient for removal of IO3 - from Hanford groundwater in a column system, with 50% breakthrough occurring at 324 pore volumes. The functional amine groups on the parent resin and amount of active sorbent in the resin can be customized to improve the iodine loading capacity. These results highlight the potential for IO3 - remediation by hybrid sorbents and represent a benchmark for the implementation of commercially available materials to meet EPA standards for cleanup of129 I in a large-scale P&T system.- Published
- 2020
- Full Text
- View/download PDF
46. Critical Water Coverage during Forsterite Carbonation in Thin Water Films: Activating Dissolution and Mass Transport.
- Author
-
Placencia-Gómez E, Kerisit SN, Mehta HS, Qafoku O, Thompson CJ, Graham TR, Ilton ES, and Loring JS
- Subjects
- Carbonates, Silicon Compounds, Solubility, Carbon Dioxide, Water
- Abstract
In geologic carbon sequestration, CO
2 is injected into geologic reservoirs as a supercritical fluid (scCO2 ). The carbonation of divalent silicates exposed to humidified scCO2 occurs in angstroms to nanometers thick adsorbed H2 O films. A threshold H2 O film thickness is required for carbonate precipitation, but a mechanistic understanding is lacking. In this study, we investigated carbonation of forsterite (Mg2 SiO4 ) in humidified scCO2 (50 °C and 90 bar), which serves as a model system for understanding subsurface divalent silicate carbonation reactivity. Attenuated total reflection infrared spectroscopy pinpointed that magnesium carbonate precipitation begins at 1.5 monolayers of adsorbed H2 O. At about this same H2 O coverage, transmission infrared spectroscopy showed that forsterite dissolution begins and electrical impedance spectroscopy demonstrated that diffusive transport accelerates. Molecular dynamics simulations indicated that the onset of diffusion is due to an abrupt decrease in the free-energy barriers for lateral mobility of outer-spherically adsorbed Mg2+ . The dissolution and mass transport controls on divalent silicate reactivity in wet scCO2 could be advantageous for maximizing permeability near the wellbore and minimize leakage through the caprock.- Published
- 2020
- Full Text
- View/download PDF
47. Evaluation of materials for iodine and technetium immobilization through sorption and redox-driven processes.
- Author
-
Pearce CI, Cordova EA, Garcia WL, Saslow SA, Cantrell KJ, Morad JW, Qafoku O, Matyáš J, Plymale AE, Chatterjee S, Kang J, Colon FC, Levitskaia TG, Rigali MJ, Szecsody JE, Heald SM, Balasubramanian M, Wang S, Sun DT, Queen WL, Bontchev R, Moore RC, and Freedman VL
- Abstract
Radioactive iodine-129 (
129 I) and technetium-99 (99 Tc) pose a risk to groundwater due to their long half-lives, toxicity, and high environmental mobility. Based on literature reviewed in Moore et al. (2019) and Pearce et al. (2019), natural and engineered materials, including iron oxides, low-solubility sulfides, tin-based materials, bismuth-based materials, organoclays, and metal organic frameworks, were tested for potential use as a deployed technology for the treatment of129 I and99 Tc to reduce environmental mobility. Materials were evaluated with metrics including capacity for IO3 - and TcO4 - uptake, selectivity and long-term immobilization potential. Batch testing was used to determine IO3 - and TcO4 - sorption under aerobic conditions for each material in synthetic groundwater at different solution to solid ratios. Material association with IO3 - and TcO4 - was spatially resolved using scanning electron microscopy and X-ray microprobe mapping. The potential for redox reactions was assessed using X-ray absorption near edge structure spectroscopy. Of the materials tested, bismuth oxy(hydroxide) and ferrihydrite performed the best for IO3 - . The commercial Purolite A530E anion-exchange resin outperformed all materials in its sorption capacity for TcO4 - . Tin-based materials had high capacity for TcO4 - , but immobilized TcO4 - via reductive precipitation. Bismuth-based materials had high capacity for TcO4 - , though slightly lower than the tin-based materials, but did not immobilize TcO4 - by a redox-drive process, mitigating potential negative re-oxidation effects over longer time periods under oxic conditions. Cationic metal organic frameworks and polymer networks had high Tc removal capacity, with TcO4 - trapped within the framework of the sorbent material. Although organoclays did not have the highest capacity for IO3 - and TcO4 - removal in batch experiments, they are available commercially in large quantities, are relatively low cost and have low environmental impact, so were investigated in column experiments, demonstrating scale-up and removal of IO3 - and TcO4 - via sorption, and reductive immobilization with iron- and sulfur-based species., (Copyright © 2020 Elsevier B.V. All rights reserved.)- Published
- 2020
- Full Text
- View/download PDF
48. Ion-ion interactions enhance aluminum solubility in alkaline suspensions of nano-gibbsite (α-Al(OH) 3 ) with sodium nitrite/nitrate.
- Author
-
Dembowski M, Snyder MM, Delegard CH, Reynolds JG, Graham TR, Wang HW, Leavy II, Baum SR, Qafoku O, Fountain MS, Rosso KM, Clark SB, and Pearce CI
- Abstract
Despite widespread industrial importance, predicting metal solubilities in highly concentrated, multicomponent aqueous solutions is difficult due to poorly understood ion-ion and ion-solvent interactions. Aluminum hydroxide solid phase solubility in concentrated sodium hydroxide (NaOH) solutions is one such case, with major implications for ore refining, as well as processing of radioactive waste stored at U.S. Department of Energy legacy sites, such as the Hanford Site, Washington State. The solubility of gibbsite (α-Al(OH)
3 ) is often not well predicted because other ions affect the activity of hydroxide (OH- ) and aluminate (Al(OH)4 - ) anions. In the present study, we systematically examined the influence of key anions, nitrite (NO2 - ) and nitrate (NO3 - ), as sodium salts on the solubility of α-Al(OH)3 in NaOH solutions taking care to establish equilibrium from both under- and oversaturation. Rapid equilibration was enabled by use of a highly pure and crystalline synthetic nano-gibbsite of well-defined particle size and shape. Measured dissolved aluminum concentrations were compared with those predicted by an α-Al(OH)3 solubility model derived for simple Al(OH)4 - /OH- systems. Specific anion effects were expressed as an enhancement factor (Alenhc ) conveying the excess of dissolved aluminum. At 45 °C, NaNO2 and NaNO3 -containing systems exhibited Alenhc values of 2.70 and 1.88, respectively, indicating significant enhancement. The solutions were examined by Raman and high-field27 Al NMR spectroscopy, indicating specific interactions including Al(OH)4 - -Na+ contact ion pairing and Al(OH)4 - -NO2 - /NO3 - ion-ion interactions. Dynamic evolution of the α-Al(OH)3 particles including growth and agglomeration was observed revealing the importance of dissolution/reprecipitation in establishing equilibrium. These studies indicate that incomplete ion hydration, as a result of the low water activity in these concentrated electrolytes, results in: (i) enhanced reactivity of the hydroxide ion with respect to α-Al(OH)3 ; (ii) increased concentrations of Al(OH)4 - in solution; and (iii) stronger ion-ion interactions that act to stabilize the supersaturated solutions. This information on the mechanisms by which α-Al(OH)3 becomes supersaturated is essential for more energy-efficient aluminum processing technologies, including the treatment of millions of gallons of Al(OH)4 - -rich high-level radioactive waste.- Published
- 2020
- Full Text
- View/download PDF
49. Association of Defects and Zinc in Hematite.
- Author
-
Bylaska EJ, Catalano JG, Mergelsberg ST, Saslow SA, Qafoku O, Prange MP, and Ilton ES
- Subjects
- Ferric Compounds, Minerals, Water, Trace Elements, Zinc
- Abstract
Zn is an essential micronutrient that is often limited in tropical, lateritic soils in part because it is sequestered in nominally refractory iron oxide phases. Stable phases such as goethite and hematite, however, can undergo reductive recrystallization without a phase change under circumneutral pH conditions and release metal impurities such as Zn into aqueous solutions. Further, the process appears to be driven by Fe vacancies. In this contribution, we used ab initio molecular dynamics informed extended X-ray absorption fine structure spectra to show that Zn incorporated in the structure of hematite is associated with coupled O-Fe and protonated Fe vacancies, providing a potential link between crystal chemistry and the bioavailability of Zn.
- Published
- 2019
- Full Text
- View/download PDF
50. Facet-Specific Photocatalytic Degradation of Organics by Heterogeneous Fenton Chemistry on Hematite Nanoparticles.
- Author
-
Huang X, Chen Y, Walter E, Zong M, Wang Y, Zhang X, Qafoku O, Wang Z, and Rosso KM
- Subjects
- Catalysis, Photolysis, Ferric Compounds, Nanoparticles
- Abstract
Hematite nanoparticles are abundant in the photic zone of aquatic environments, where they play a prominent role in photocatalytic transformations of bound organics. Here, we examine the photocatalytic degradation of rhodamine B by visible light using two different structurally well-defined hematite nanoparticle morphologies. In addition to detailed solid characterization and aqueous kinetics measurements, we also exploit species-selective scavengers in electron paramagnetic resonance spectroscopy to sequester specific reaction channels and thereby assess their impact. The photodegradation rates for nanoplates dominated by {001} facets and nanocubes dominated by {012} facets were 0.13 and 0.7 h
-1 , respectively, and the turnover frequencies for the active sites on {001} and {012} were 7.89 × 10-3 and 3.07× 10-3 s-1 , yielding apparent activation energies of 17.13 and 24.94 kcal/mol within the energetic span model, respectively. Facet-specific differences appear to be directly not linked with the simple aerial cation site density but instead with their extent of undercoordination. By establishing this linkage, the findings lay a foundation for predicting the photocatalytic degradation efficiency for the myriad of possible hematite nanoparticle morphologies and more broadly help unveil key reactions at the interface that may govern photocatalytic organic transformations in natural and engineered aquatic environments.- Published
- 2019
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.