1. Fuscibacter oryzae gen. nov., sp. nov., a phosphate-solubilizing bacterium isolated from the rhizosphere of rice plant
- Author
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Yoonseop So, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Inhyup Kim, and Taegun Seo
- Subjects
DNA, Bacterial ,Rhizosphere ,Rhodobacter ,biology ,Cobalamin biosynthesis ,Strain (chemistry) ,Fatty Acids ,Oryza ,Sequence Analysis, DNA ,General Medicine ,biology.organism_classification ,16S ribosomal RNA ,Microbiology ,Bacterial Typing Techniques ,Phosphates ,RNA, Ribosomal, 16S ,Botany ,Pseudorhodobacter ,Rhodobacteraceae ,Molecular Biology ,Gene ,Phospholipids ,Phylogeny ,Bacteria - Abstract
An ovoid to rod shaped, white tobrown pigmented, facultative anaerobic, mesophilic, non-phototrophic, Gram-staining-negative, non-motile, multiply by binary fission designated strain KVB23T, which was isolated from root of rice plant, near Ilsan, South Korea, was investigated for its taxonomic position by polyphasic approach. Optimal growth was found to occur at 30˚C, at pH 6.5 and in the absence of NaCl on R2A. Phylogenetic analysis based on the 16S rRNA gene sequence of strain KVB23Trevealed that it formed a distinct lineage, as a separate deep branch within the family Rhodobacteriaceae, with Rhodobacter, Xinfangfangia, Tabrizicola, Falsirhodobacter, Haematobacter, Paenirhodobacter, Pseudorhodobacter and Pararhodobacter. Based in 16S rRNA sequences strain KVB23T was most closely related to Tabrizicola fusiformis KCTC 62105T (96.5%) and Rhodobacter thermarumKCTC 52712T(96.2%).The draft genome of strain KVB23Twas 3.80 bp long with a DNA G + C content of 63.1 %. Genome of strain KVB23T harboured gene clusters for tryptophan and cobalaminbiosynthesis. The strain contained Q-10 as the sole respiratory quinone. The predominant fatty acids were found to consist of C16:0, C18:0 and summed feature 8 (comprising C18:1 ω7c and / or C18:1 ω6). The polar lipids were identified as diphosphatidylglycerol, phosphatidylethanolamine,seven unidentified phosphoglycolipids, two unidentified aminophosphoglycolipid, one unidentified glycolipid and four unidentified lipids.Phosphate-solubilizing bacteria have the ability to dissolve insoluble phosphates and enhance the soil fertility. Strain KVB23Tcan solubilize calcium phosphate tribasic. Phosphate solubilizing and tryptophan biosynthesis property of strain KVB23T could be a possible factor for the increase in growth of rice plant. Differential phenotypic, chemotaxonomic and genotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain KVB23T was found to represent a novel genus in the Rhodobacteriaceaefamily, for which the name Fuscibacteroryzae gen. nov., sp. nov. is proposed, with the type strain KVB23T(=KACC 21711T =NBRC 114716T).
- Published
- 2021
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