1. HIV reprograms host m6Am RNA methylome by viral Vpr protein-mediated degradation of PCIF1.
- Author
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Zhang, Qiong, Kang, Yuqi, Wang, Shaobo, Gonzalez, Gwendolyn Michelle, Li, Wanyu, Hui, Hui, Wang, Yinsheng, and Rana, Tariq M
- Subjects
Humans ,HIV-1 ,HIV Infections ,Adaptor Proteins ,Signal Transducing ,Nuclear Proteins ,RNA ,RNA ,Messenger ,5' Untranslated Regions ,RNA ,Viral ,Adenosine ,Virus Replication ,Transcription ,Genetic ,RNA Stability ,Methylation ,Genome ,Viral ,Proto-Oncogene Protein c-ets-1 ,vpr Gene Products ,Human Immunodeficiency Virus ,Protein Stability ,Proteolysis ,Genetics ,Infectious Diseases ,HIV/AIDS ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,Infection - Abstract
N6,2'-O-dimethyladenosine (m6Am) is an abundant RNA modification located adjacent to the 5'-end of the mRNA 7-methylguanosine (m7G) cap structure. m6A methylation on 2'-O-methylated A at the 5'-ends of mRNAs is catalyzed by the methyltransferase Phosphorylated CTD Interacting Factor 1 (PCIF1). The role of m6Am and the function of PCIF1 in regulating host-pathogens interactions are unknown. Here, we investigate the dynamics and reprogramming of the host m6Am RNA methylome during HIV infection. We show that HIV infection induces a dramatic decrease in m6Am of cellular mRNAs. By using PCIF1 depleted T cells, we identify 2237 m6Am genes and 854 are affected by HIV infection. Strikingly, we find that PCIF1 methyltransferase function restricts HIV replication. Further mechanism studies show that HIV viral protein R (Vpr) interacts with PCIF1 and induces PCIF1 ubiquitination and degradation. Among the m6Am genes, we find that PCIF1 inhibits HIV infection by enhancing a transcription factor ETS1 (ETS Proto-Oncogene 1, transcription factor) stability that binds HIV promoter to regulate viral transcription. Altogether, our study discovers the role of PCIF1 in HIV-host interactions, identifies m6Am modified genes in T cells which are affected by viral infection, and reveals how HIV regulates host RNA epitranscriptomics through PCIF1 degradation.
- Published
- 2021