1,542,396 results on '"Prognosis"'
Search Results
2. Change in Biomarker Profile After Neoadjuvant Chemotherapy is Prognostic and Common Among Patients with HER2+ Breast Cancer.
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Tchou, Julia, Gottipati, Soumy, Goldbach, Macy, Baxter, Molly, Venters, Sara, Balassanian, Ron, Vohra, Poonam, Gonzalves, Diego, Ahmad, Zahra, Nayak, Anupma, Boughey, Judy, Mukhtar, Rita, and Chen, Yunn-Yi
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Humans ,Female ,Receptor ,ErbB-2 ,Neoadjuvant Therapy ,Biomarkers ,Tumor ,Middle Aged ,Antineoplastic Combined Chemotherapy Protocols ,Breast Neoplasms ,Follow-Up Studies ,Survival Rate ,Prognosis ,Neoplasm ,Residual ,Receptors ,Progesterone ,Adult ,Receptors ,Estrogen ,Aged ,Neoplasm Staging ,Chemotherapy ,Adjuvant ,Triple Negative Breast Neoplasms ,Carcinoma ,Ductal ,Breast - Abstract
BACKGROUND: Rates of pathologic complete response (pCR) after neoadjuvant chemotherapy (NAC) for breast cancer have improved, especially among human epidermal growth factor 2-positive (HER2+) and triple-negative subtypes. The frequency and significance of biomarker profile change in residual disease are unclear. This study aimed to determine the rate of biomarker profile changes after NAC and the impact on clinical outcomes in a contemporary cohort. METHODS: Upon institutional review board approval, the study identified 634 consecutive patients treated with NAC between 2010 and 2022 at two academic institutions. The study cohort was focused on patients with residual disease who underwent biomarker profile retesting. Biomarker profile change for each subtype was compared across groups using Fisher-Irwin tests. Cox Proportional Hazards Model and Kaplan-Meier plots were performed to evaluate the association of changed versus unchanged biomarker profile with event-free survival. RESULTS: Biomarker retesting was performed for 259 (61.4 %) of 422 patients with residual disease. Biomarker profile change occurred in 18.1 % overall and was significantly higher among those with pre-NAC HER2+ disease (32.7 %, 17/52) than among those with HER2-disease (14.5 %, 30/207) (p = 0.004). Conversion of pre-NAC biomarker profiles of HR+HER2- and HR+HER2+ to triple-negative breast cancer (TNBC) post-NAC may be associated with worse event-free survival, hazard ratios of 2.23 (95 % confidence interval [CI], 0.90-5.53; p = 0.08), trending toward significance, and 36.7 (95 % CI, 2.2-610.8; p = 0.01), respectively. CONCLUSIONS: The results from one of the largest contemporary cohorts demonstrated that biomarker profile change in patients with residual disease after NAC was common. Furthermore, specific biomarker profile change in residual disease may have prognostic value. These findings strengthen the rationale for routine re-testing of biomarkers in residual disease after NAC.
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- 2024
3. Distinct Indications for Adjuvant Therapy in Resected Invasive Mucinous Cystic Neoplasms of the Pancreas Compared with Pancreatic Ductal Adenocarcinoma.
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Wong, Paul, Pollini, Tommaso, Adam, Mohamed, Alseidi, Adnan, Corvera, Carlos, Hirose, Kenzo, Kirkwood, Kimberly, Nakakura, Eric, Thornblade, Lucas, and Maker, Ajay
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Humans ,Female ,Male ,Pancreatic Neoplasms ,Middle Aged ,Carcinoma ,Pancreatic Ductal ,Aged ,Survival Rate ,Pancreatectomy ,Chemotherapy ,Adjuvant ,Follow-Up Studies ,Prognosis ,Neoplasm Invasiveness ,Retrospective Studies ,Cystadenocarcinoma ,Mucinous - Abstract
BACKGROUND: Surgical and adjuvant management of mucinous cystic neoplasms (MCNs) lacks formal guidelines and data is limited to institutional studies. Factors associated with receipt of adjuvant therapy and any associated impact on survival remain to be clarified. In the absence of other data, guidelines that recommend adjuvant chemotherapy for invasive pancreatic adenocarcinoma have been extrapolated to MCN. PATIENTS AND METHODS: The National Cancer Database (2004-2019) was utilized to identify all patients that underwent pancreatic resection for invasive MCNs. Patients that received neoadjuvant therapy or did not undergo lymphadenectomy were excluded. Patient, tumor, and treatment factors associated with survival were assessed. RESULTS: For 161 patients with invasive MCN, median overall survival (OS) was 133 months and 45% of patients received adjuvant therapy. Multivariable analysis demonstrated that poorly differentiated tumors [odds ratio (OR) 4.19, 95% confidence interval (CI) 1.47-11.98; p = 0.008] and positive lymph node status (OR 2.67, 95% CI 1.02-6.98; p = 0.042) were independent predictors of receiving adjuvant therapy. Lymph node positivity [hazard ratio (HR) 2.90, 95% CI 1.47-5.73; p = 0.002], positive margins (HR 5.28, 95% CI 2.28-12.27; p
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- 2024
4. NAB2::STAT6 fusions and genome-wide DNA methylation profiling: Predictors of patient outcomes in meningeal solitary fibrous tumors.
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Eschbacher, Kathryn, Tran, Quynh, Moskalev, Evgeny, Jenkins, Sarah, Fritchie, Karen, Stoehr, Robert, Caron, Alissa, Link, Michael, Brown, Paul, Guajardo, Andrew, Brat, Daniel, Wu, Ashley, Santagata, Sandro, Louis, David, Brastianos, Priscilla, Kaplan, Alexander, Alexander, Brian, Rossi, Sabrina, Ferrarese, Fabio, Raleigh, David, Nguyen, Minh, Gross, John, Velazquez Vega, Jose, Rodriguez, Fausto, Perry, Arie, Martinez-Lage, Maria, Orr, Brent, Haller, Florian, and Giannini, Caterina
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CNS WHO grade ,NAB2::STAT6 ,TERT ,meningeal solitary fibrous tumor ,solitary fibrous tumor ,Humans ,Female ,Male ,Middle Aged ,Solitary Fibrous Tumors ,DNA Methylation ,STAT6 Transcription Factor ,Adult ,Repressor Proteins ,Aged ,Meningeal Neoplasms ,Young Adult ,Adolescent ,Aged ,80 and over ,Child ,Prognosis ,Telomerase - Abstract
Meningeal solitary fibrous tumors (SFT) are rare and have a high frequency of local recurrence and distant metastasis. In a cohort of 126 patients (57 female, 69 male; mean age at surgery 53.0 years) with pathologically confirmed meningeal SFTs with extended clinical follow-up (median 9.9 years; range 15 days-43 years), we performed extensive molecular characterization including genome-wide DNA methylation profiling (n = 80) and targeted TERT promoter mutation testing (n = 98). Associations were examined with NAB2::STAT6 fusion status (n = 101 cases; 51 = ex5-7::ex16-17, 26 = ex4::ex2-3; 12 = ex2-3::exANY/other and 12 = no fusion) and placed in the context of 2021 Central Nervous System (CNS) WHO grade. NAB2::STAT6 fusion breakpoints (fusion type) were significantly associated with metastasis-free survival (MFS) (p = 0.03) and, on multivariate analysis, disease-specific survival (DSS) when adjusting for CNS WHO grade (p = 0.03). DNA methylation profiling revealed three distinct clusters: Cluster 1 (n = 38), Cluster 2 (n = 22), and Cluster 3 (n = 20). Methylation clusters were significantly associated with fusion type (p
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- 2024
5. Beat-AML 2024 ELN-refined risk stratification for older adults with newly diagnosed AML given lower-intensity therapy.
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Hoff, Fieke, Blum, William, Huang, Ying, Welkie, Rina, Swords, Ronan, Traer, Elie, Stein, Eytan, Lin, Tara, Archer, Kellie, Patel, Prapti, Collins, Robert, Baer, Maria, Duong, Vu, Arellano, Martha, Stock, Wendy, Odenike, Olatoyosi, Redner, Robert, Kovacsovics, Tibor, Deininger, Michael, Zeidner, Joshua, Olin, Rebecca, Smith, Catherine, Foran, James, Schiller, Gary, Curran, Emily, Koenig, Kristin, Heerema, Nyla, Chen, Timothy, Martycz, Molly, Stefanos, Mona, Marcus, Sonja, Rosenberg, Leonard, Druker, Brian, Levine, Ross, Burd, Amy, Yocum, Ashley, Borate, Uma, Mims, Alice, Byrd, John, and Madanat, Yazan
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Humans ,Leukemia ,Myeloid ,Acute ,Aged ,Female ,Male ,Middle Aged ,Aged ,80 and over ,Prognosis ,Risk Assessment ,Mutation ,Antineoplastic Combined Chemotherapy Protocols - Abstract
Although the 2022 European LeukemiaNet (ELN) acute myeloid leukemia (AML) risk classification reliably predicts outcomes in younger patients treated with intensive chemotherapy, it is unclear whether it applies to adults ≥60 years treated with lower-intensity treatment (LIT). We aimed to test the prognostic impact of ELN risk in patients with newly diagnosed (ND) AML aged ≥60 years given LIT and to further refine risk stratification for these patients. A total of 595 patients were included: 11% had favorable-, 11% intermediate-, and 78% had adverse-risk AML. ELN risk was prognostic for overall survival (OS) (P < .001) but did not stratify favorable- from intermediate-risk (P = .71). Within adverse-risk AML, the impact of additional molecular abnormalities was further evaluated. Multivariable analysis was performed on a training set (n = 316) and identified IDH2 mutation as an independent favorable prognostic factor, and KRAS, MLL2, and TP53 mutations as unfavorable (P < .05). A mutation score was calculated for each combination of these mutations, assigning adverse-risk patients to 2 risk groups: -1 to 0 points (Beat-AML intermediate) vs 1+ points (Beat-AML adverse). In the final refined risk classification, ELN favorable- and intermediate-risk were combined into a newly defined Beat-AML favorable-risk group, in addition to mutation scoring within the ELN adverse-risk group. This approach redefines risk for older patients with ND AML and proposes refined Beat-AML risk groups with improved discrimination for OS (2-year OS, 48% vs 33% vs 11%, respectively; P < .001), providing patients and providers additional information for treatment decision-making.
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- 2024
6. The biological significance of tumor grade, age, enhancement, and extent of resection in IDH-mutant gliomas: How should they inform treatment decisions in the era of IDH inhibitors?
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van den Bent, Martin, French, Pim, Brat, Daniel, Tonn, Joerg, Touat, Mehdi, Ellingson, Benjamin, Young, Robert, Pallud, Johan, von Deimling, Andreas, Sahm, Felix, Figarella Branger, Dominique, Huang, Ruirui, Weller, Michael, Mellinghoff, Ingo, Cloughsey, Tim, Huse, Jason, Aldape, Kenneth, Reifenberger, Guido, Youssef, Gilbert, Karschnia, Philipp, Noushmehr, Houtan, Peters, Katherine, Ducray, Francois, Preusser, Matthias, and Wen, Patrick
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WHO brain tumor classification ,astrocytoma IDH-mutant ,oligodendroglioma IDH-mutant and 1p/19q codeleted ,prognosis ,vorasidenib ,Humans ,Isocitrate Dehydrogenase ,Glioma ,Brain Neoplasms ,Mutation ,Neoplasm Grading ,Age Factors ,Clinical Decision-Making ,Enzyme Inhibitors - Abstract
The 2016 and 2021 World Health Organization 2021 Classification of central nervous system tumors have resulted in a major improvement in the classification of isocitrate dehydrogenase (IDH)-mutant gliomas. With more effective treatments many patients experience prolonged survival. However, treatment guidelines are often still based on information from historical series comprising both patients with IDH wild-type and IDH-mutant tumors. They provide recommendations for radiotherapy and chemotherapy for so-called high-risk patients, usually based on residual tumor after surgery and age over 40. More up-to-date studies give a better insight into clinical, radiological, and molecular factors associated with the outcome of patients with IDH-mutant glioma. These insights should be used today for risk stratification and for treatment decisions. In many patients with IDH-mutant grades 2 and 3 glioma, if carefully monitored postponing radiotherapy and chemotherapy is safe, and will not jeopardize the overall outcome of patients. With the INDIGO trial showing patient benefit from the IDH inhibitor vorasidenib, there is a sizable population in which it seems reasonable to try this class of agents before recommending radio-chemotherapy with its delayed adverse event profile affecting quality of survival. Ongoing trials should help to further identify the patients that are benefiting from this treatment.
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- 2024
7. Parsimonious immune-response endotypes and global outcome in patients with traumatic brain injury.
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Samanta, Romit, Chiollaz, Anne-Cécile, Needham, Edward, Yue, John, Helmy, Adel, Zanier, Elisa, Wang, Kevin, Kobeissy, Firas, Posti, Jussi, Summers, Charlotte, Manley, Geoffrey, Maas, Andrew, Tenovuo, Olli, Sanchez, Jean-Charles, and Menon, David
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Clustering ,Inflammation ,Stratified medicine ,Traumatic brain injury ,Humans ,Brain Injuries ,Traumatic ,Male ,Female ,Middle Aged ,Adult ,Biomarkers ,Aged ,Phenotype ,Inflammation Mediators ,Prospective Studies ,Prognosis ,Cytokines - Abstract
BACKGROUND: The inflammatory response in patients with traumatic brain injury (TBI) offers opportunities for stratification and intervention. Previous unselected approaches to immunomodulation in patients with TBI have not improved patient outcomes. METHODS: Serum and plasma samples from two prospective, multi-centre observational studies of patients with TBI were used to discover (Collaborative European NeuroTrauma Effectiveness Research [CENTER-TBI], Europe) and validate (Transforming Research and Clinical Knowledge in Traumatic Brain Injury [TRACK-TBI] Pilot, USA) individual variations in the immune response using a multiplex panel of 30 inflammatory mediators. Mediators that were associated with unfavourable outcomes (Glasgow outcome score-extended [GOS-E] ≤ 4) were used for hierarchical clustering to identify patients with similar signatures. FINDINGS: Two clusters were identified in both the discovery and validation cohorts, termed early-inflammatory and pauci-inflammatory. The early-inflammatory phenotype had higher concentrations of interleukin-6 (IL-6), IL-15, and monocyte chemoattractant protein 1 (MCP1). Patients with the early-inflammatory phenotype were older and more likely to have an unfavourable GOS-E at 6 months. There were no differences in the baseline injury severity scores between patients in each phenotype. A combined IL-15 and MCP1 signature identified patients with the early-inflammatory phenotype in both cohorts. Inflammatory processes mediated outcomes in older patients with moderate-severe TBI. INTERPRETATION: Our findings offer a precision medicine approach for future clinical trials of immunomodulation in patients with TBI, by using inflammatory signatures to stratify patients. FUNDING: CENTER-TBI study was supported by the European Union 7th Framework Programme. TRACK-TBI is supported by the National Institute of Neurological Disorders and Stroke.
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- 2024
8. Oncologic Safety of Immediate Oncoplastic Surgery Compared with Standard Breast-Conserving Surgery for Patients with Invasive Lobular Carcinoma.
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Falade, Israel, Switalla, Kayla, Quirarte, Astrid, Baxter, Molly, Soroudi, Daniel, Rothschild, Harriet, Abe, Shoko, Goodwin, Karen, Piper, Merisa, Wong, Jasmine, Foster, Robert, and Mukhtar, Rita
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Invasive Lobular Carcinoma ,Breast Conserving Surgery ,Lumpectomy ,Oncologic Safety ,Oncoplastic Reduction Mammoplasty ,Positive Margins ,Recurrence Free Survival ,Surgical Outcomes ,Humans ,Carcinoma ,Lobular ,Female ,Breast Neoplasms ,Mastectomy ,Segmental ,Retrospective Studies ,Middle Aged ,Mammaplasty ,Aged ,Follow-Up Studies ,Margins of Excision ,Survival Rate ,Neoplasm Invasiveness ,Adult ,Prognosis ,Aged ,80 and over ,Neoplasm Recurrence ,Local - Abstract
BACKGROUND: Invasive lobular carcinoma (ILC) of the breast grows in a diffuse pattern, resulting in a high risk of positive margins at surgical resection. Oncoplastic approaches have been shown to reduce this risk, but concerns persist around the safety of immediate oncoplastic surgery for those with ILC. This study evaluated the short- and long-term oncologic outcomes of immediate oncoplastic surgery for patients with ILC. METHODS: This study retrospectively analyzed an institutional database of stages I to III ILC patients who underwent breast-conserving surgery (BCS) with or without immediate oncoplastic surgery (oncoplastic closure or oncoplastic reduction mammoplasty [ORM]). The study compared positive margin rates, rates of successful BCS, and recurrence-free survival (RFS) by type of surgery. RESULTS: For 494 patients the findings showed that the use of immediate ORM was associated with significantly lower odds of positive margins (odds ratio [OR], 0.34; 95 % confidence interval [CI], 0.17-0.66; p = 0.002). Both lumpectomy with oncoplastic closure and ORM were significantly associated with higher rates of successful BCS than standard lumpectomy (94.2 %, 87.8 %, and 73.9 %, respectively; p < 0.001). No difference in RFS was observed between those undergoing immediate oncoplastic surgery and those undergoing standard lumpectomy alone. CONCLUSIONS: The patients with stages I to III ILC who underwent immediate oncoplastic surgery had significant benefits including lower odds of positive margins and higher rates of successful BCS, with both types of immediate oncoplastic surgery showing similar RFS compared with lumpectomy alone. This supports the oncologic safety of immediate oncoplastic surgery for diffusely growing tumors such as ILC, providing it an ideal option for patients desiring BCS.
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- 2024
9. Surveillance Strategies After Primary Treatment for Patients with Invasive Lobular Carcinoma of the Breast: Method of Local Recurrence Detection After Breast-Conserving Surgery.
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Clelland, Elle, Quirarte, Astrid, Rothschild, Harriet, Kaur, Mandeep, Mujir, Firdows, Record, Helena, Wong, Jasmine, and Mukhtar, Rita
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Breast cancer ,Imaging ,Invasive lobular carcinoma ,Recurrence ,Surveillance ,Humans ,Breast Neoplasms ,Female ,Carcinoma ,Lobular ,Neoplasm Recurrence ,Local ,Mastectomy ,Segmental ,Retrospective Studies ,Middle Aged ,Mammography ,Aged ,Follow-Up Studies ,Survival Rate ,Magnetic Resonance Imaging ,Neoplasm Invasiveness ,Prognosis ,Adult ,Population Surveillance - Abstract
BACKGROUND: Invasive lobular carcinoma (ILC) is the second most common subtype of breast cancer. Although mammography is known to have low sensitivity for ILC, there are no data to guide the optimal surveillance after treatment. We explored surveillance strategies after breast-conserving surgery (BCS) for ILC and determined the proportion of imaging-detected recurrences versus interval cancers. METHODS: From an institutional database of 813 women, we retrospectively identified patients who underwent BCS for stage I-III ILC and subsequently had a recurrence. We categorized patients by surveillance strategy and determined the modality of recurrence detection. Interval cancer rates for local recurrences were compared across surveillance strategies using the Chi-square test. We evaluated overall survival with the log-rank test and a Cox proportional hazards model. RESULTS: We included 58 patients with ILC who had a recurrence after BCS. Of these, 22 (37.9%) had local recurrence, 27 (46.6%) had distant recurrence, and 9 (15.5%) had both local and distant recurrence. Most patients underwent routine mammographic surveillance (65.2%), with 19.6% having supplemental breast magnetic resonance imaging (MRI) and 15.2% having no surveillance. The interval cancer rate was significantly higher in the mammographic surveillance group compared with the MRI surveillance group (61.9% vs. 16.7%; p
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- 2024
10. Clipping the Positive Lymph Node in Patients with Clinically Node Positive Breast Cancer Treated with Neoadjuvant Chemotherapy: Impact on Axillary Surgery in the ISPY-2 Clinical Trial.
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Switalla, Kayla, Boughey, Judy, Dimitroff, Katrina, Yau, Christina, Ladores, Velle, Yu, Hongmei, Tchou, Julia, Golshan, Mehra, Ahrendt, Gretchen, Postlewait, Lauren, Piltin, Mara, Reyna, Chantal, Matsen, Cindy, Tuttle, Todd, Wallace, Anne, Arciero, Cletus, Lee, Marie, Tseng, Jennifer, Son, Jennifer, Rao, Roshni, Sauder, Candice, Naik, Arpana, Howard-McNatt, Marissa, Lancaster, Rachael, Norwood, Peter, Esserman, Laura, and Mukhtar, Rita
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Breast cancer ,Clipped node ,Neoadjuvant chemotherapy ,Sentinel lymph node surgery ,Targeted axillary dissection ,Humans ,Breast Neoplasms ,Female ,Neoadjuvant Therapy ,Axilla ,Middle Aged ,Retrospective Studies ,Lymph Node Excision ,Sentinel Lymph Node Biopsy ,Follow-Up Studies ,Lymph Nodes ,Survival Rate ,Antineoplastic Combined Chemotherapy Protocols ,Prognosis ,Lymphatic Metastasis ,Adult ,Aged ,Sentinel Lymph Node ,Chemotherapy ,Adjuvant ,Surgical Instruments - Abstract
BACKGROUND: For patients with clinically node-positive (cN+) breast cancer undergoing neoadjuvant chemotherapy (NAC), retrieving previously clipped, biopsy-proven positive lymph nodes during sentinel lymph node biopsy [i.e., targeted axillary dissection (TAD)] may reduce false negative rates. However, the overall utilization and impact of clipping positive nodes remains uncertain. PATIENTS AND METHODS: We retrospectively analyzed cN+ ISPY-2 patients (2011-2022) undergoing axillary surgery after NAC. We evaluated trends in node clipping and associations with type of axillary surgery [sentinel lymph node (SLN) only, SLN and axillary lymph node dissection (ALND), or ALND only] and event-free survival (EFS) in patients that were cN+ on a NAC trial. RESULTS: Among 801 cN+ patients, 161 (20.1%) had pre-NAC clip placement in the positive node. The proportion of patients that were cN+ undergoing clip placement increased from 2.4 to 36.2% between 2011 and 2021. Multivariable logistic regression showed nodal clipping was independently associated with higher odds of SLN-only surgery [odds ratio (OR) 4.3, 95% confidence interval (CI) 2.8-6.8, p < 0.001]. This was also true among patients with residual pathologically node-positive (pN+) disease. Completion ALND rate did not differ based on clip retrieval success. No significant differences in EFS were observed in those with or without clip placement, both with or without successful clip retrieval [hazard ratio (HR) 0.85, 95% CI 0.4-1.7, p = 0.7; HR 1.8, 95% CI 0.5-6.0, p = 0.3, respectively]. CONCLUSION: Clip placement in the positive lymph node before NAC is increasingly common. The significant association between clip placement and omission of axillary dissection, even among patients with pN+ disease, suggests a paradigm shift toward TAD as a definitive surgical management strategy in patients with pN+ disease after NAC.
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- 2024
11. Stereotactic radiosurgery for brain metastases from human epidermal receptor 2 positive breast Cancer: an international, multi-center study.
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Pikis, Stylianos, Mantziaris, Georgios, Protopapa, Maria, Tos, Salem, Kowalchuk, Roman, Ross, Richard, Rusthoven, Chad, Tripathi, Manjul, Langlois, Anne-Marie, Mathieu, David, Lee, Cheng-Chia, Yang, Huai-Che, Peker, Selcuk, Samanci, Yavuz, Zhang, Michael, Braunstein, Steve, Wei, Zhishuo, Niranjan, Ajay, Lunsford, Dade, and Sheehan, Jason
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Brain metastasis ,Breast cancer ,Gamma Knife ,Radiosurgery ,Humans ,Female ,Breast Neoplasms ,Radiosurgery ,Middle Aged ,Brain Neoplasms ,Retrospective Studies ,Receptor ,ErbB-2 ,Aged ,Prognosis ,Treatment Outcome ,Follow-Up Studies ,Adult - Abstract
PURPOSE: To report patient outcomes and local tumor control rates in a cohort of patients with biopsy-proven HER-2 positive breast cancer treated with stereotactic radiosurgery (SRS) for brain metastases (BM). METHODS: This international, retrospective, multicenter study, included 195 female patients with 1706 SRS-treated BM. Radiologic and clinical outcomes after SRS were determined and prognostic factors identified. RESULTS: At SRS, median patient age was 55 years [interquartile range (IQR) 47.6-62.0], and 156 (80%) patients had KPS ≥ 80. The median tumor volume was 0.1 cm3 (IQR 0.1-0.5) and the median prescription dose was 16 Gy (IQR 16-18). Local tumor control (LTC) rate was 98%, 94%, 93%, 90%, and 88% at six-, 12-, 24-, 36- and 60-months post-SRS, respectively. On multivariate analysis, tumor volume (p =
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- 2024
12. Predicting in-hospital mortality among patients admitted with a diagnosis of heart failure: a machine learning approach.
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Jawadi, Zina, He, Rosemary, Srivastava, Pratyaksh, Fonarow, Gregg, Khalil, Suzan, Krishnan, Srikanth, Eskin, Eleazar, Chiang, Jeffrey, and Nsair, Ali
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Heart failure ,Machine learning ,Risk prediction ,Humans ,Heart Failure ,Machine Learning ,Female ,Male ,Hospital Mortality ,Aged ,Middle Aged ,Risk Assessment ,Aged ,80 and over ,Retrospective Studies ,Prognosis ,Stroke Volume ,Hospitalization ,Risk Factors ,Survival Rate - Abstract
Existing risk prediction models for hospitalized heart failure patients are limited. We identified patients hospitalized with a diagnosis of heart failure between 7 May 2013 and 26 April 2022 from a large academic, quaternary care medical centre (training cohort). Demographics, medical comorbidities, vitals, and labs were collected and were used to construct random forest machine learning models to predict in-hospital mortality. Models were compared with logistic regression, and to commonly used heart failure risk scores. The models were subsequently validated in patients hospitalized with a diagnosis of heart failure from a second academic, community medical centre (validation cohort). The entire cohort comprised 21 802 patients, of which 14 539 were in the training cohort and 7263 were in the validation cohort. The median age (25th-75th percentile) was 70 (58-82) for the entire cohort, 43.2% were female, and 6.7% experienced inpatient mortality. In the overall cohort, 7621 (35.0%) patients had heart failure with reduced ejection fraction (EF ≤ 40%), 1271 (5.8%) had heart failure with mildly reduced EF (EF 41-49%), and 12 910 (59.2%) had heart failure with preserved EF (EF ≥ 50%). Random forest models in the validation cohort demonstrated a c-statistic (95% confidence interval) of 0.96 (0.95-0.97), sensitivity (SN) of 87.3%, and specificity (SP) of 90.6% for the prediction of in-hospital mortality. Models for those with HFrEF demonstrated a c-statistic of 0.96 (0.94-0.98), SN 88.2%, and SP 91.0%, and those for patients with HFpEF showed a c-statistic of 0.95 (0.93-0.97), SN 87.4%, and SP 89.5% for predicting in-hospital mortality. The random forest model significantly outperformed logistic regression (c-statistic 0.87, SN 75.9%, and SP 86.9%), and current existing risk scores including the Acute Decompensated Heart Failure National Registry risk score (c-statistic of 0.70, SN 69%, and SP 62%), and the Get With the Guidelines-Heart Failure risk score (c-statistic 0.69, SN 67%, and SP 63%); P
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- 2024
13. Outcome of Patients with Pregnancy-Associated Breast Cancer Who Have Subsequent Pregnancies.
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Doll, Alissa, Lipsyc-Sharf, Marla, Sim, Myung, Baker, Jennifer, and Kapoor, Nimmi
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Humans ,Female ,Pregnancy ,Breast Neoplasms ,Retrospective Studies ,Adult ,Pregnancy Complications ,Neoplastic ,Follow-Up Studies ,Survival Rate ,Pregnancy Outcome ,Prognosis - Abstract
BACKGROUND: After treatment of pregnancy-associated breast cancer (PABC), some women desire future pregnancy. While safety of pregnancy after breast cancer has been demonstrated, the same cannot be said about women with PABC. OBJECTIVE: The aim of this study was to describe the incidence and outcomes of patients with PABC with subsequent pregnancies compared with those without another pregnancy. METHODS: A retrospective chart review identified patients diagnosed with breast cancer during pregnancy or within 5 years postpartum between 2011 and 2023. Patients were then screened for further pregnancy. Clinicopathologic variables, oncologic outcomes, and pregnancy outcomes were recorded. The Chi-square test and t-test were used to compare patients with subsequent pregnancy with those without. Kaplan-Meier method and log-rank test were used to estimate 5-year disease-free survival (DFS). RESULTS: Overall, 75 patients with PABC were identified, 58 of whom had PABC and no further pregnancies (NSP-PABC) and 17 with subsequent pregnancy (SP-PABC). Compared with patients with NSP-PABC, patients with SP-PABC were significantly younger (p = 0.015) and less likely to have prior pregnancies (p
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- 2024
14. Disparities in the Occurrence of Long-Term Effects of Bone Marrow Suppression after Treatment in Adolescent Young Adult Breast Cancer Survivors
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Bellini, A, Keegan, THM, Li, Q, Maguire, FB, Lyo, V, and Sauder, Candice
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Breast Cancer ,Sepsis ,Women's Health ,Pediatric ,Minority Health ,Rare Diseases ,Health Disparities ,Clinical Research ,Infectious Diseases ,Hematology ,Pediatric Cancer ,Humans ,Female ,Adolescent ,Young Adult ,Breast Neoplasms ,Adult ,Cancer Survivors ,Follow-Up Studies ,Prognosis ,Survival Rate ,Anemia ,Incidence ,California ,Bone Marrow Diseases ,Thrombocytopenia ,Breast cancer ,Adolescent and young adult ,Bone marrow suppression ,Race/ethnicity ,AYA breast cancer survivors ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundMany adolescent and young adult (AYA) patients with breast cancer (BC) receive adjuvant therapy as initial treatment, with long-term bone marrow suppression as a potential complication, but no studies have evaluated the impact of race/ethnicity on the development of bone marrow suppression in AYA BC survivors.Patients and methodsFemale patients ages 15-39 years diagnosed with BC (2006-2018) and surviving ≥ 2 years were identified from the California Cancer Registry and linked to statewide hospitalization data. We estimated the cumulative incidence of developing late effects of bone marrow suppression, such as leukopenia, anemia, thrombocytopenia, bleeding, and infection/sepsis, during hospital discharge diagnoses present ≥ 2 years after diagnosis. We examined the impact of sociodemographic and clinical factors on late effects using multivariate Cox proportional hazards regression.ResultsOf 11,293 patients, 42.8% were non-Hispanic (nH) White, 28.8% Hispanic, 19.5% nH Asian/Pacific Islander, and 7.5% nH Black. In multivariable analyses, nH Blacks had the highest risk (versus nH Whites) of anemia [hazard ratio (HR) 1.72, 95% confidence interval (CI) 1.47-2.02], leukopenia (HR 1.56, CI 1.14-2.13), thrombocytopenia (HR 1.46, CI 1.08-1.99), major infection/sepsis (HR 1.64, CI 1.4-1.92), and bleeding (HR 1.89, CI 1.39-2.58). Hispanics had a higher risk of developing anemia (HR 1.17, CI 1.04-1.32), bleeding (HR 1.4, CI 1.12-1.76), and major infections/sepsis (HR 1.36, CI 1.21-1.52). Asian/Pacific Islanders had only a higher risk of developing bleeding (HR 1.33, CI 1.03-1.72). Patients from a low neighborhood socioeconomic status had a 20% higher risk of infection/sepsis (HR 1.21, CI 1.1-1.34), but there were no associations for the other late effects.ConclusionsWe identified that AYAs of nH Black, Hispanic, and Asian/Pacific Islander race/ethnicity are at an increased risk of several late effects after adjuvant therapy compared with nH White patients. From these data, providers can implement early/frequent screening of hematologic late effects in these high-risk survivors.
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- 2024
15. Multiomic single cell sequencing identifies stemlike nature of mixed phenotype acute leukemia.
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Peretz, Cheryl, Kennedy, Vanessa, Walia, Anushka, Delley, Cyrille, Koh, Andrew, Tran, Elaine, Clark, Iain, Hayford, Corey, DAmato, Chris, Xue, Yi, Fontanez, Kristina, May-Zhang, Aaron, Smithers, Trinity, Agam, Yigal, Wang, Qian, Dai, Hai-Ping, Roy, Ritu, Logan, Aaron, Perl, Alexander, Abate, Adam, Olshen, Adam, and Smith, Catherine
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Humans ,Single-Cell Analysis ,Male ,Female ,Leukemia ,Biphenotypic ,Acute ,Adult ,Middle Aged ,Transcriptome ,Prognosis ,Aged ,Gene Expression Profiling ,Neoplastic Stem Cells ,Phenotype ,Immunophenotyping ,Mutation ,Sequence Analysis ,RNA ,Gene Expression Regulation ,Leukemic - Abstract
Despite recent work linking mixed phenotype acute leukemia (MPAL) to certain genetic lesions, specific driver mutations remain undefined for a significant proportion of patients and no genetic subtype is predictive of clinical outcomes. Moreover, therapeutic strategy for MPAL remains unclear, and prognosis is overall poor. We performed multiomic single cell profiling of 14 newly diagnosed adult MPAL patients to characterize the inter- and intra-tumoral transcriptional, immunophenotypic, and genetic landscapes of MPAL. We show that neither genetic profile nor transcriptome reliably correlate with specific MPAL immunophenotypes. Despite this, we find that MPAL blasts express a shared stem cell-like transcriptional profile indicative of high differentiation potential. Patients with the highest differentiation potential demonstrate inferior survival in our dataset. A gene set score, MPAL95, derived from genes highly enriched in the most stem-like MPAL cells, is applicable to bulk RNA sequencing data and is predictive of survival in an independent patient cohort, suggesting a potential strategy for clinical risk stratification.
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- 2024
16. Circulating Tumor DNA Assay Detects Merkel Cell Carcinoma Recurrence, Disease Progression, and Minimal Residual Disease: Surveillance and Prognostic Implications.
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Akaike, Tomoko, Thakuria, Manisha, Silk, Ann, Hippe, Daniel, Park, Song, So, Naomi, Maloney, Nolan, Gunnell, Lindsay, Eschholz, Alec, Kim, Emily, Sinha, Sumi, Hall, Evan, Bhatia, Shailender, Reddy, Sunil, Rodriguez, Angel, Aleshin, Alexey, Choi, Jacob, Tsai, Kenneth, Yom, Sue, Yu, Siegrid, Choi, Jaehyuk, Chandra, Sunandana, Nghiem, Paul, and Zaba, Lisa
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Humans ,Carcinoma ,Merkel Cell ,Male ,Female ,Circulating Tumor DNA ,Aged ,Neoplasm Recurrence ,Local ,Skin Neoplasms ,Prospective Studies ,Middle Aged ,Disease Progression ,Prognosis ,Aged ,80 and over ,Neoplasm ,Residual ,Biomarkers ,Tumor ,Adult - Abstract
PURPOSE: Merkel cell carcinoma (MCC) is an aggressive skin cancer with a 40% recurrence rate, lacking effective prognostic biomarkers and surveillance methods. This prospective, multicenter, observational study aimed to evaluate circulating tumor DNA (ctDNA) as a biomarker for detecting MCC recurrence. METHODS: Plasma samples, clinical data, and imaging results were collected from 319 patients. A tumor-informed ctDNA assay was used for analysis. Patients were divided into discovery (167 patients) and validation (152 patients) cohorts. Diagnostic performance, including sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV), was assessed. RESULTS: ctDNA showed high sensitivity, 95% (discovery; 95% CI, 87 to 99) and 94% (validation; 95% CI, 85 to 98), for detecting disease at enrollment, with corresponding specificities of 90% (95% CI, 82 to 95) and 86% (95% CI, 77 to 93). A positive ctDNA during surveillance indicated increased recurrence risk, with hazard ratios (HRs) of 6.8 (discovery; 95% CI, 2.9 to 16) and 20 (validation; 95% CI, 8.3 to 50). The PPV for clinical recurrence at 1 year after a positive ctDNA test was 69% (discovery; 95% CI, 32 to 91) and 94% (validation; 95% CI, 71 to 100), respectively. The NPV at 135 days after a negative ctDNA test was 94% (discovery; 95% CI, 90 to 97) and 93% (validation; 95% CI, 89 to 97), respectively. Patients positive for ctDNA within 4 months after treatment had higher rates of recurrence, with 1-year rates of 74% versus 21% (adjusted HR, 7.4 [95% CI, 2.7 to 20]). CONCLUSION: ctDNA testing exhibited high prognostic accuracy in detecting MCC recurrence, suggesting its potential to reduce frequent surveillance imaging. ctDNA also identifies high-risk patients who need more frequent imaging and may be best suited for adjuvant therapy trials.
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- 2024
17. Marizomib for patients with newly diagnosed glioblastoma: A randomized phase 3 trial
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Roth, Patrick, Gorlia, Thierry, Reijneveld, Jaap C, de Vos, Filip, Idbaih, Ahmed, Frenel, Jean-Sébastien, Le Rhun, Emilie, Sepulveda, Juan Manuel, Perry, James, Masucci, G Laura, Freres, Pierre, Hirte, Hal, Seidel, Clemens, Walenkamp, Annemiek, Lukacova, Slavka, Meijnders, Paul, Blais, Andre, Ducray, Francois, Verschaeve, Vincent, Nicholas, Garth, Balana, Carmen, Bota, Daniela A, Preusser, Matthias, Nuyens, Sarah, Dhermain, Fréderic, van den Bent, Martin, O’Callaghan, Chris J, Vanlancker, Maureen, Mason, Warren, and Weller, Michael
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Orphan Drug ,Clinical Trials and Supportive Activities ,Rare Diseases ,Neurosciences ,Comparative Effectiveness Research ,Brain Cancer ,Patient Safety ,Clinical Research ,Radiation Oncology ,Cancer ,Brain Disorders ,6.1 Pharmaceuticals ,Humans ,Glioblastoma ,Male ,Middle Aged ,Female ,Brain Neoplasms ,Aged ,Lactones ,Adult ,Temozolomide ,Pyrroles ,Survival Rate ,DNA Repair Enzymes ,Follow-Up Studies ,DNA Modification Methylases ,Chemoradiotherapy ,Prognosis ,Antineoplastic Combined Chemotherapy Protocols ,Young Adult ,EORTC 1709 ,glioma ,MGMT ,proteasome inhibitor ,randomized study ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundStandard treatment for patients with newly diagnosed glioblastoma includes surgery, radiotherapy (RT), and temozolomide (TMZ) chemotherapy (TMZ/RT→TMZ). The proteasome has long been considered a promising therapeutic target because of its role as a central biological hub in tumor cells. Marizomib is a novel pan-proteasome inhibitor that crosses the blood-brain barrier.MethodsEuropean Organisation for Research and Treatment of Cancer 1709/Canadian Cancer Trials Group CE.8 was a multicenter, randomized, controlled, open-label phase 3 superiority trial. Key eligibility criteria included newly diagnosed glioblastoma, age > 18 years and Karnofsky performance status > 70. Patients were randomized in a 1:1 ratio. The primary objective was to compare overall survival (OS) in patients receiving marizomib in addition to TMZ/RT→TMZ with patients receiving the only standard treatment in the whole population and in the subgroup of patients with MGMT promoter-unmethylated tumors.ResultsThe trial was opened at 82 institutions in Europe, Canada, and the U.S. A total of 749 patients (99.9% of the planned 750) were randomized. OS was not different between the standard and the marizomib arm (median 17 vs. 16.5 months; HR = 1.04; P = .64). PFS was not statistically different either (median 6.0 vs. 6.3 months; HR = 0.97; P = .67). In patients with MGMT promoter-unmethylated tumors, OS was also not different between standard therapy and marizomib (median 14.5 vs. 15.1 months, HR = 1.13; P = .27). More CTCAE grade 3/4 treatment-emergent adverse events were observed in the marizomib arm than in the standard arm.ConclusionsAdding marizomib to standard temozolomide-based radiochemotherapy resulted in more toxicity, but did not improve OS or PFS in patients with newly diagnosed glioblastoma.
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- 2024
18. Keratin 17 is a prognostic and predictive biomarker in pancreatic ductal adenocarcinoma.
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Delgado-Coka, Lyanne, Roa-Peña, Lucia, Babu, Sruthi, Horowitz, Michael, Petricoin, Emanuel, Matrisian, Lynn, Blais, Edik, Marchenko, Natalia, Allard, Felicia, Akalin, Ali, Jiang, Wei, Larson, Brent, Hendifar, Andrew, Picozzi, Vincent, Choi, Minsig, Shroyer, Kenneth, and Escobar-Hoyos, Luisa
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chemotherapies ,immunohistochemistry ,pancreatic ductal adenocarcinoma ,predictive biomarkers ,Humans ,Carcinoma ,Pancreatic Ductal ,Pancreatic Neoplasms ,Biomarkers ,Tumor ,Male ,Female ,Prognosis ,Middle Aged ,Aged ,Keratin-17 ,Fluorouracil ,Deoxycytidine ,Gemcitabine ,Immunohistochemistry ,Adult ,Aged ,80 and over - Abstract
OBJECTIVES: To determine the role of keratin 17 (K17) as a predictive biomarker for response to chemotherapy by defining thresholds of K17 expression based on immunohistochemical tests that could be used to optimize therapeutic intervention for patients with pancreatic ductal adenocarcinoma (PDAC). METHODS: We profiled K17 expression, a hallmark of the basal molecular subtype of PDAC, by immunohistochemistry in 2 cohorts of formalin-fixed, paraffin-embedded PDACs (n = 305). We determined a K17 threshold of expression to optimize prognostic stratification according to the lowest Akaike information criterion and explored the potential relationship between K17 and chemoresistance by multivariate predictive analyses. RESULTS: Patients with advanced-stage, low K17 PDACs treated using 5-fluorouracil (5-FU)-based chemotherapeutic regimens had 3-fold longer survival than corresponding cases treated with gemcitabine-based chemotherapy. By contrast, PDACs with high K17 did not respond to either regimen. The predictive value of K17 was independent of tumor mutation status and other clinicopathologic variables. CONCLUSIONS: The detection of K17 in 10% or greater of PDAC cells identified patients with shortest survival. Among patients with low K17 PDACs, 5-FU-based treatment was more likely than gemcitabine-based therapies to extend survival.
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- 2024
19. Impact of amyloid and cardiometabolic risk factors on prognostic capacity of plasma neurofilament light chain for neurodegeneration
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Kim, Keun You, Kim, Eosu, and Lee, Jun-Young
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Health Services and Systems ,Health Sciences ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Aging ,Prevention ,Behavioral and Social Science ,Neurodegenerative ,Neurosciences ,Dementia ,Brain Disorders ,Alzheimer's Disease ,Clinical Research ,Acquired Cognitive Impairment ,2.1 Biological and endogenous factors ,Neurological ,Humans ,Female ,Male ,Aged ,Neurofilament Proteins ,Longitudinal Studies ,Amyloid beta-Peptides ,Prognosis ,Biomarkers ,Cardiometabolic Risk Factors ,Positron-Emission Tomography ,Aged ,80 and over ,Cognitive Dysfunction ,Alzheimer Disease ,Hippocampus ,Magnetic Resonance Imaging ,Alzheimer’s Disease Neuroimaging Initiative ,Alzheimer’s disease ,Blood-based biomarker ,Cardiovascular disease ,Kidney disease ,Metabolic syndrome ,Neurofilament light chain ,Medical and Health Sciences ,Biomedical and clinical sciences ,Health sciences - Abstract
BackgroundPlasma neurofilament light chain (NfL) is a blood biomarker of neurodegeneration, including Alzheimer's disease. However, its usefulness may be influenced by common conditions in older adults, including amyloid-β (Aβ) deposition and cardiometabolic risk factors like hypertension, diabetes mellitus (DM), impaired kidney function, and obesity. This longitudinal observational study using the Alzheimer's Disease Neuroimaging Initiative cohort investigated how these conditions influence the prognostic capacity of plasma NfL.MethodsNon-demented participants (cognitively unimpaired or mild cognitive impairment) underwent repeated assessments including the Alzheimer's Disease Assessment Scale-Cognitive subscale (ADAS-Cog) scores, hippocampal volumes, and white matter hyperintensity (WMH) volumes at 6- or 12-month intervals. Linear mixed-effect models were employed to examine the interaction between plasma NfL and various variables of interest, such as Aβ (evaluated using Florbetapir positron emission tomography), hypertension, DM, impaired kidney function, or obesity.ResultsOver a mean follow-up period of 62.5 months, participants with a mean age of 72.1 years (n = 720, 48.8% female) at baseline were observed. Higher plasma NfL levels at baseline were associated with steeper increases in ADAS-Cog scores and WMH volumes, and steeper decreases in hippocampal volumes over time (all p-values
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- 2024
20. Long-Term Survival Outcomes After Minimally Invasive Surgery for Ileal Neuroendocrine Tumors.
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Yogo, Akitada, Paciorek, Alan, Kasai, Yosuke, Moon, Farhana, Hirose, Kenzo, Corvera, Carlos, Bergsland, Emily, and Nakakura, Eric
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Hand-assisted laparoscopic surgery ,Ileal neuroendocrine tumors ,Mesenteric mass ,Minimally invasive surgery ,Propensity score ,Humans ,Male ,Female ,Neuroendocrine Tumors ,Middle Aged ,Retrospective Studies ,Survival Rate ,Follow-Up Studies ,Ileal Neoplasms ,Minimally Invasive Surgical Procedures ,Aged ,Prognosis ,Hepatectomy ,Adult - Abstract
BACKGROUND: Ileal neuroendocrine tumors (i-NETs) are characterized by their multifocality and bulky mesenteric mass. Having shown that minimally invasive surgery (MIS) utilizing a hand-access port device has favorable short-term outcomes and achieves the goals of surgery for i-NETs, we sought to analyze long-term survival outcomes of MIS. METHODS: One hundred and sixty-eight patients who underwent resection of primary i-NETs at a single institution between January 2007 and February 2023 were retrospectively studied. Patients were categorized into the MIS or open surgery cohorts on an intention-to-treat basis. Open surgery was selected mainly based on the need for hepatectomy or bulky mesenteric mass resection. Overall survival was analyzed using log-rank tests with propensity score matching (PSM) and Cox proportional hazards regression. PSM was performed to reduce standardized mean differences of the variables to
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- 2024
21. Long-Duration Neoadjuvant Therapy with FOLFIRINOX Yields Favorable Outcomes for Patients Who Undergo Surgery for Pancreatic Cancer.
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Miller, Phoebe, Romero-Hernandez, Fernanda, Calthorpe, Lucia, Wang, Jaeyun, Kim, Sunhee, Corvera, Carlos, Hirose, Kenzo, Kirkwood, Kimberly, Hirose, Ryutaro, Maker, Ajay, Alseidi, Adnan, Adam, Mohamed, Kim, Grace, Tempero, Margaret, Ko, Andrew, and Nakakura, Eric
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Humans ,Pancreatic Neoplasms ,Neoadjuvant Therapy ,Antineoplastic Combined Chemotherapy Protocols ,Male ,Female ,Retrospective Studies ,Leucovorin ,Irinotecan ,Fluorouracil ,Survival Rate ,Middle Aged ,Oxaliplatin ,Aged ,Follow-Up Studies ,Prognosis ,Pancreatectomy ,Carcinoma ,Pancreatic Ductal ,Adult - Abstract
BACKGROUND: In 2023 alone, its estimated that over 64,000 patients will be diagnosed with PDAC and more than 50,000 patients will die of the disease. Current guidelines recommend neoadjuvant therapy for patients with borderline resectable and locally advanced PDAC, and data is emerging on its role in resectable disease. Neoadjuvant chemotherapy may increase the number of patients able to receive complete chemotherapy regimens, increase the rate of microscopically tumor-free resection (R0) margin, and aide in identifying unfavorable tumor biology. To date, this is the largest study to examine surgical outcomes after long-duration neoadjuvant chemotherapy for PDAC. METHODS: Retrospective analysis of single-institution data. RESULTS: The routine use of long-duration therapy in our study (median cycles: FOLFIRINOX = 10; gemcitabine-based = 7) is unique. The majority (85%) of patients received FOLFIRINOX without radiation therapy; the R0 resection rate was 76%. Median OS was 41 months and did not differ significantly among patients with resectable, borderline-resectable, or locally advanced disease. CONCLUSIONS: This study demonstrates that in patients who undergo surgical resection after receipt of long-duration neoadjuvant FOLFIRINOX therapy alone, survival outcomes are similar regardless of pretreatment resectability status and that favorable surgical outcomes can be attained.
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- 2024
22. Secretory carcinoma of minor salivary glands.
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Tamimi, Imad, Krutyansky, Artem, Tran, Michael, and Fatahzadeh, Mahnaz
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DENTAL care ,DIFFERENTIAL diagnosis ,COMPUTED tomography ,SALIVARY gland tumors ,ORAL mucosa ,IMMUNOHISTOCHEMISTRY ,MEDICAL appointments ,PAROTID glands - Abstract
Secretory carcinoma is a malignant salivary gland tumor, which typically presents as an indolent painless mass within the parotid gland. Involvement of the minor gland is reported but less common. Secretory carcinoma was often misclassified as other salivary gland mimics, particularly acinic cell carcinoma, prior to 2010. It was first recognized as a molecularly distinct salivary gland tumor harboring the same fusion gene as well as histologic and cytogenetic features seen in juvenile breast cancer. Secretory carcinoma is generally managed in the same way as other low-grade salivary gland neoplasms and has a favorable prognosis; however, high-grade transformation requiring aggressive therapeutic interventions have been documented. Recent studies of biologic agents targeting products of this fusion gene offer the promise of a novel therapeutic option for treatment of this malignancy. Due to the limited number of reported cases, the spectrum of clinical behavior, best practices for management, and long-term treatment outcomes for secretory carcinoma remain unclear. A long-standing secretory carcinoma involving minor salivary glands of the mucobuccal fold, which was detected years after it was first noted by the patient, is reported. This case brings to light the importance of a thorough clinical exam during dental visits and reviews diagnostic differentiation of this malignancy from other mimics and discusses decision making for its management. [ABSTRACT FROM AUTHOR]
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- 2024
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23. Atrial cardiomyopathy revisited-evolution of a concept: a clinical consensus statement of the European Heart Rhythm Association (EHRA) of the ESC, the Heart Rhythm Society (HRS), the Asian Pacific Heart Rhythm Society (APHRS), and the Latin American Heart Rhythm Society (LAHRS).
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Goette, Andreas, Corradi, Domenico, Dobrev, Dobromir, Aguinaga, Luis, Cabrera, Jose-Angel, Chugh, Sumeet, de Groot, Joris, Soulat-Dufour, Laurie, Fenelon, Guilherme, Hatem, Stephane, Jalife, Jose, Lin, Yenn-Jiang, Lip, Gregory, Marcus, Gregory, Murray, Katherine, Pak, Hui-Nam, Schotten, Ulrich, Takahashi, Naohiko, Yamaguchi, Takanori, Zoghbi, William, Nattel, Stanley, Mont, Lluis, Akar, Joseph, Akoum, Nazem, Althoff, Till, Diaz, Juan, Guichard, Jean-Baptiste, Jadidi, Amir, Kalman, Jonathan, Lim, Han, and Teixeira, Ricardo
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Atrial fibrillation ,Cardiomyopathy ,Fibrosis ,Mechanisms ,Pathophysiology ,Stroke ,Atrium ,Humans ,Action Potentials ,Atrial Fibrillation ,Cardiomyopathies ,Consensus ,Heart Atria ,Heart Rate ,Prognosis ,Terminology as Topic - Abstract
AIMS: The concept of atrial cardiomyopathy (AtCM) had been percolating through the literature since its first mention in 1972. Since then, publications using the term were sporadic until the decision was made to convene an expert working group with representation from four multinational arrhythmia organizations to prepare a consensus document on atrial cardiomyopathy in 2016 (EHRA/HRS/APHRS/SOLAECE expert consensus on atrial cardiomyopathies: definition, characterization, and clinical implication). Subsequently, publications on AtCM have increased progressively. METHODS AND RESULTS: The present consensus document elaborates the 2016 AtCM document further to implement a simple AtCM staging system (AtCM stages 1-3) by integrating biomarkers, atrial geometry, and electrophysiological changes. However, the proposed AtCM staging needs clinical validation. Importantly, it is clearly stated that the presence of AtCM might serve as a substrate for the development of atrial fibrillation (AF) and AF may accelerates AtCM substantially, but AtCM per se needs to be viewed as a separate entity. CONCLUSION: Thus, the present document serves as a clinical consensus statement of the European Heart Rhythm Association (EHRA) of the ESC, the Heart Rhythm Society (HRS), the Asian Pacific Heart Rhythm Society (APHRS), and the Latin American Heart Rhythm Society (LAHRS) to contribute to the evolution of the AtCM concept.
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- 2024
24. The Nonlinear Relationship Between Temperature and Prognosis in Sepsis-induced Coagulopathy Patients: A Retrospective Cohort Study from MIMIC-IV Database
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Chen, Guojun, Zhou, Tianen, Xu, Jingtao, Hu, Qiaohua, Jiang, Jun, and Xu, Weigan
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Sepsis-induced coagulopathy ,temperature ,Hypothermia ,fever ,Mortality ,Prognosis - Abstract
Background: The prognostic value of body temperature in sepsis-induced coagulopathy (SIC) remains unclear. In this study we aimed to investigate the association between temperature and mortality among SIC patients.Methods: We analyzed data for 9,860 SIC patients from an intensive care database. Patients were categorized by maximum temperature in the first 24 hours into the following: ≤36.0°C; 36.0–37.0°C; 37.0–38.0°C; 38.0–39.0°C; and ≥39.0°C. The primary outcome was 28-day mortality. We used multivariate regression to analyze the temperature-mortality association.Results: The 37.0–38.0°C, 38.0–39.0°C and ≥39.0°C groups correlated with lower 28-day mortality (adjusted HR 0.70, 0.76 and 0.72, respectively), while the
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- 2024
25. Concurrent RB1 Loss and BRCA Deficiency Predicts Enhanced Immunologic Response and Long-term Survival in Tubo-ovarian High-grade Serous Carcinoma
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Saner, Flurina AM, Takahashi, Kazuaki, Budden, Timothy, Pandey, Ahwan, Ariyaratne, Dinuka, Zwimpfer, Tibor A, Meagher, Nicola S, Fereday, Sian, Twomey, Laura, Pishas, Kathleen I, Hoang, Therese, Bolithon, Adelyn, Traficante, Nadia, Group, for the Australian Ovarian Cancer Study, Alsop, Kathryn, Christie, Elizabeth L, Kang, Eun-Young, Nelson, Gregg S, Ghatage, Prafull, Lee, Cheng-Han, Riggan, Marjorie J, Alsop, Jennifer, Beckmann, Matthias W, Boros, Jessica, Brand, Alison H, Brooks-Wilson, Angela, Carney, Michael E, Coulson, Penny, Courtney-Brooks, Madeleine, Cushing-Haugen, Kara L, Cybulski, Cezary, El-Bahrawy, Mona A, Elishaev, Esther, Erber, Ramona, Gayther, Simon A, Gentry-Maharaj, Aleksandra, Gilks, C Blake, Harnett, Paul R, Harris, Holly R, Hartmann, Arndt, Hein, Alexander, Hendley, Joy, Hernandez, Brenda Y, Jakubowska, Anna, Jimenez-Linan, Mercedes, Jones, Michael E, Kaufmann, Scott H, Kennedy, Catherine J, Kluz, Tomasz, Koziak, Jennifer M, Kristjansdottir, Björg, Le, Nhu D, Lener, Marcin, Lester, Jenny, Lubiński, Jan, Mateoiu, Constantina, Orsulic, Sandra, Ruebner, Matthias, Schoemaker, Minouk J, Shah, Mitul, Sharma, Raghwa, Sherman, Mark E, Shvetsov, Yurii B, Soong, T Rinda, Steed, Helen, Sukumvanich, Paniti, Talhouk, Aline, Taylor, Sarah E, Vierkant, Robert A, Wang, Chen, Widschwendter, Martin, Wilkens, Lynne R, Winham, Stacey J, Anglesio, Michael S, Berchuck, Andrew, Brenton, James D, Campbell, Ian, Cook, Linda S, Doherty, Jennifer A, Fasching, Peter A, Fortner, Renée T, Goodman, Marc T, Gronwald, Jacek, Huntsman, David G, Karlan, Beth Y, Kelemen, Linda E, Menon, Usha, Modugno, Francesmary, Pharoah, Paul DP, Schildkraut, Joellen M, Sundfeldt, Karin, Swerdlow, Anthony J, Goode, Ellen L, DeFazio, Anna, Köbel, Martin, Ramus, Susan J, Bowtell, David DL, and Garsed, Dale W
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Genetics ,Women's Health ,Rare Diseases ,Orphan Drug ,Cancer Genomics ,Ovarian Cancer ,Precision Medicine ,Human Genome ,Cancer ,2.1 Biological and endogenous factors ,Humans ,Female ,Ovarian Neoplasms ,BRCA2 Protein ,BRCA1 Protein ,Cystadenocarcinoma ,Serous ,Retinoblastoma Binding Proteins ,Prognosis ,Ubiquitin-Protein Ligases ,Neoplasm Grading ,Lymphocytes ,Tumor-Infiltrating ,Middle Aged ,Germ-Line Mutation ,Gene Expression Regulation ,Neoplastic ,Aged ,Biomarkers ,Tumor ,CD8-Positive T-Lymphocytes ,Australian Ovarian Cancer Study Group ,Oncology & Carcinogenesis ,Clinical sciences ,Oncology and carcinogenesis - Abstract
PurposeThe purpose of this study was to evaluate RB1 expression and survival across ovarian carcinoma histotypes and how co-occurrence of BRCA1 or BRCA2 (BRCA) alterations and RB1 loss influences survival in tubo-ovarian high-grade serous carcinoma (HGSC).Experimental designRB1 protein expression was classified by immunohistochemistry in ovarian carcinomas of 7,436 patients from the Ovarian Tumor Tissue Analysis consortium. We examined RB1 expression and germline BRCA status in a subset of 1,134 HGSC, and related genotype to overall survival (OS), tumor-infiltrating CD8+ lymphocytes, and transcriptomic subtypes. Using CRISPR-Cas9, we deleted RB1 in HGSC cells with and without BRCA1 alterations to model co-loss with treatment response. We performed whole-genome and transcriptome data analyses on 126 patients with primary HGSC to characterize tumors with concurrent BRCA deficiency and RB1 loss.ResultsRB1 loss was associated with longer OS in HGSC but with poorer prognosis in endometrioid ovarian carcinoma. Patients with HGSC harboring both RB1 loss and pathogenic germline BRCA variants had superior OS compared with patients with either alteration alone, and their median OS was three times longer than those without pathogenic BRCA variants and retained RB1 expression (9.3 vs. 3.1 years). Enhanced sensitivity to cisplatin and paclitaxel was seen in BRCA1-altered cells with RB1 knockout. Combined RB1 loss and BRCA deficiency correlated with transcriptional markers of enhanced IFN response, cell-cycle deregulation, and reduced epithelial-mesenchymal transition. CD8+ lymphocytes were most prevalent in BRCA-deficient HGSC with co-loss of RB1.ConclusionsCo-occurrence of RB1 loss and BRCA deficiency was associated with exceptionally long survival in patients with HGSC, potentially due to better treatment response and immune stimulation.
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- 2024
26. Integrated analyses highlight interactions between the three-dimensional genome and DNA, RNA and epigenomic alterations in metastatic prostate cancer.
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Zhao, Shuang, Bootsma, Matthew, Zhou, Stanley, Shrestha, Raunak, Moreno-Rodriguez, Thaidy, Lundberg, Arian, Pan, Chu, Arlidge, Christopher, Hawley, James, Foye, Adam, Weinstein, Alana, Sjöström, Martin, Zhang, Meng, Li, Haolong, Chesner, Lisa, Rydzewski, Nicholas, Helzer, Kyle, Shi, Yue, Lynch, Molly, Dehm, Scott, Lang, Joshua, Alumkal, Joshi, He, Hansen, Wyatt, Alexander, Aggarwal, Rahul, Zwart, Wilbert, Small, Eric, Quigley, David, Lupien, Mathieu, and Feng, Felix
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Humans ,Male ,DNA Methylation ,5-Methylcytosine ,Gene Expression Regulation ,Neoplastic ,Epigenomics ,Neoplasm Metastasis ,Genome ,Human ,Prostatic Neoplasms ,Epigenesis ,Genetic ,Receptors ,Androgen ,Chromatin ,Prostatic Neoplasms ,Castration-Resistant ,Oncogene Proteins ,Fusion ,DNA ,Whole Genome Sequencing ,RNA ,Prognosis - Abstract
The impact of variations in the three-dimensional structure of the genome has been recognized, but solid cancer tissue studies are limited. Here, we performed integrated deep Hi-C sequencing with matched whole-genome sequencing, whole-genome bisulfite sequencing, 5-hydroxymethylcytosine (5hmC) sequencing and RNA sequencing across a cohort of 80 biopsy samples from patients with metastatic castration-resistant prostate cancer. Dramatic differences were present in gene expression, 5-methylcytosine/5hmC methylation and in structural variation versus mutation rate between A and B (open and closed) chromatin compartments. A subset of tumors exhibited depleted regional chromatin contacts at the AR locus, linked to extrachromosomal circular DNA (ecDNA) and worse response to AR signaling inhibitors. We also identified topological subtypes associated with stark differences in methylation structure, gene expression and prognosis. Our data suggested that DNA interactions may predispose to structural variant formation, exemplified by the recurrent TMPRSS2-ERG fusion. This comprehensive integrated sequencing effort represents a unique clinical tumor resource.
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- 2024
27. A susceptibility gene signature for ERBB2-driven mammary tumour development and metastasis in collaborative cross mice.
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Yang, Hui, Wang, Xinzhi, Blanco-Gómez, Adrián, He, Li, García-Sancha, Natalia, Corchado-Cobos, Roberto, Pérez-Baena, Manuel, Jiménez-Navas, Alejandro, Wang, Pin, Inman, Jamie, Snijders, Antoine, Threadgill, David, Balmain, Allan, Chang, Hang, Perez-Losada, Jesus, and Mao, Jian-Hua
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Breast cancer ,Collaborative cross mice ,Gene signature ,Prognosis ,Treatment response prediction ,Tumour susceptibility ,Animals ,Female ,Receptor ,ErbB-2 ,Mice ,Genetic Predisposition to Disease ,Polymorphism ,Single Nucleotide ,Humans ,Collaborative Cross Mice ,Genome-Wide Association Study ,Neoplasm Metastasis ,Disease Models ,Animal ,Gene Expression Profiling ,Transcriptome ,Breast Neoplasms ,Gene Expression Regulation ,Neoplastic ,Biomarkers ,Tumor - Abstract
BACKGROUND: Deeper insights into ERBB2-driven cancers are essential to develop new treatment approaches for ERBB2+ breast cancers (BCs). We employed the Collaborative Cross (CC) mouse model to unearth genetic factors underpinning Erbb2-driven mammary tumour development and metastasis. METHODS: 732 F1 hybrid female mice between FVB/N MMTV-Erbb2 and 30 CC strains were monitored for mammary tumour phenotypes. GWAS pinpointed SNPs that influence various tumour phenotypes. Multivariate analyses and models were used to construct the polygenic score and to develop a mouse tumour susceptibility gene signature (mTSGS), where the corresponding human ortholog was identified and designated as hTSGS. The importance and clinical value of hTSGS in human BC was evaluated using public datasets, encompassing TCGA, METABRIC, GSE96058, and I-SPY2 cohorts. The predictive power of mTSGS for response to chemotherapy was validated in vivo using genetically diverse MMTV-Erbb2 mice. FINDINGS: Distinct variances in tumour onset, multiplicity, and metastatic patterns were observed in F1-hybrid female mice between FVB/N MMTV-Erbb2 and 30 CC strains. Besides lung metastasis, liver and kidney metastases emerged in specific CC strains. GWAS identified specific SNPs significantly associated with tumour onset, multiplicity, lung metastasis, and liver metastasis. Multivariate analyses flagged SNPs in 20 genes (Stx6, Ramp1, Traf3ip1, Nckap5, Pfkfb2, Trmt1l, Rprd1b, Rer1, Sepsecs, Rhobtb1, Tsen15, Abcc3, Arid5b, Tnr, Dock2, Tti1, Fam81a, Oxr1, Plxna2, and Tbc1d31) independently tied to various tumour characteristics, designated as a mTSGS. hTSGS scores (hTSGSS) based on their transcriptional level showed prognostic values, superseding clinical factors and PAM50 subtype across multiple human BC cohorts, and predicted pathological complete response independent of and superior to MammaPrint score in I-SPY2 study. The power of mTSGS score for predicting chemotherapy response was further validated in an in vivo mouse MMTV-Erbb2 model, showing that, like findings in human patients, mouse tumours with low mTSGS scores were most likely to respond to treatment. INTERPRETATION: Our investigation has unveiled many new genes predisposing individuals to ERBB2-driven cancer. Translational findings indicate that hTSGS holds promise as a biomarker for refining treatment strategies for patients with BC. FUNDING: The U.S. Department of Defense (DoD) Breast Cancer Research Program (BCRP) (BC190820), United States; MCIN/AEI/10.13039/501100011039 (PID2020-118527RB-I00, PDC2021-121735-I00), the European Union Next Generation EU/PRTR, the Regional Government of Castile and León (CSI144P20), European Union.
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- 2024
28. Plexin D1 emerges as a novel target in the development of neural lineage plasticity in treatment-resistant prostate cancer
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Chen, Bo, Xu, Pengfei, Yang, Joy C, Nip, Christopher, Wang, Leyi, Shen, Yuqiu, Ning, Shu, Shang, Yufeng, Corey, Eva, Gao, Allen C, Gestwicki, Jason E, Wei, Qiang, Liu, Liangren, and Liu, Chengfei
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Prostate Cancer ,Genetics ,Urologic Diseases ,Biotechnology ,Cancer ,2.1 Biological and endogenous factors ,5.1 Pharmaceuticals ,Humans ,Male ,Animals ,Mice ,Drug Resistance ,Neoplasm ,Cell Line ,Tumor ,Prostatic Neoplasms ,Cell Proliferation ,Gene Expression Regulation ,Neoplastic ,Cell Lineage ,Nerve Tissue Proteins ,Xenograft Model Antitumor Assays ,Cell Plasticity ,Receptors ,Cell Surface ,Prognosis ,Membrane Glycoproteins ,Intracellular Signaling Peptides and Proteins ,Oncology & Carcinogenesis ,Biochemistry and cell biology ,Oncology and carcinogenesis - Abstract
Treatment-induced neuroendocrine prostate cancer (t-NEPC) often arises from adenocarcinoma via lineage plasticity in response to androgen receptor signaling inhibitors, such as enzalutamide. However, the specific regulators and targets involved in the transition to NEPC are not well understood. Plexin D1 (PLXND1) is a cellular receptor of the semaphorin (SEMA) family that plays important roles in modulating the cytoskeleton and cell adhesion. Here, we found that PLXND1 was highly expressed and positively correlated with neuroendocrine markers in patients with NEPC. High PLXND1 expression was associated with poorer prognosis in prostate cancer patients. Additionally, PLXND1 was upregulated and negatively regulated by androgen receptor signaling in enzalutamide-resistant cells. Knockdown or knockout of PLXND1 inhibited neural lineage pathways, thereby suppressing NEPC cell proliferation, patient derived xenograft (PDX) tumor organoid viability, and xenograft tumor growth. Mechanistically, the heat shock protein 70 (HSP70) regulated PLXND1 protein stability through degradation, and inhibition of HSP70 decreased PLXND1 expression and NEPC organoid growth. In summary, our findings indicate that PLXND1 could serve as a promising therapeutic target and molecular marker for NEPC.
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- 2024
29. Cervicovaginal Metabolome and Tumor Characteristics for Endometrial Cancer Detection and Risk Stratification.
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Lorentzen, Georgia, Łaniewski, Paweł, Cui, Haiyan, Mahnert, Nichole, Mourad, Jamal, Borst, Matthew, Willmott, Lyndsay, Chase, Dana, Roe, Denise, and Herbst-Kralovetz, Melissa
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Humans ,Female ,Endometrial Neoplasms ,Metabolome ,Vagina ,Middle Aged ,Biomarkers ,Tumor ,Aged ,Metabolomics ,Prognosis ,Risk Assessment ,Cervix Uteri ,Adult ,Carcinoma ,Endometrioid - Abstract
PURPOSE: Endometrial cancer is highly prevalent and lacking noninvasive diagnostic techniques. Diagnosis depends on histological investigation of biopsy samples. Serum biomarkers for endometrial cancer have lacked sensitivity and specificity. The objective of this study was to investigate the cervicovaginal environment to improve the understanding of metabolic reprogramming related to endometrial cancer and identify potential biomarker candidates for noninvasive diagnostic and prognostic tests. EXPERIMENTAL DESIGN: Cervicovaginal lavages were collected from 192 participants with endometrial cancer (n = 66) and non-malignant conditions (n = 108), and global untargeted metabolomics was performed. Using the metabolite data (n = 920), we completed a multivariate biomarker discovery analysis. RESULTS: We analyzed grade 1/2 endometrioid carcinoma (n = 53) and other endometrial cancer subtypes (n = 13) to identify shared and unique metabolic signatures between the subtypes. When compared to non-malignant conditions, downregulation of proline (P < 0.0001), tryptophan (P < 0.0001), and glutamate (P < 0.0001) was found among both endometrial cancer groups, relating to key hallmarks of cancer including immune suppression and redox balance. Upregulation (q < 0.05) of sphingolipids, fatty acids, and glycerophospholipids was observed in endometrial cancer in a type-specific manner. Furthermore, cervicovaginal metabolites related to tumor characteristics, including tumor size and myometrial invasion. CONCLUSIONS: Our findings provide insights into understanding the endometrial cancer metabolic landscape and improvement in diagnosis. The metabolic dysregulation described in this article linked specific metabolites and pathophysiological mechanisms including cellular proliferation, energy supply, and invasion of neighboring tissues. Furthermore, cervicovaginal metabolite levels related to tumor characteristics, which are used for risk stratification. Overall, development of noninvasive diagnostics can improve both the acceptability and accessibility of diagnosis.
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- 2024
30. Minimal Residual Disease using a Plasma-Only Circulating Tumor DNA Assay to Predict Recurrence of Metastatic Colorectal Cancer Following Curative Intent Treatment.
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Parikh, Aparna, Chee, Bryant, Tsai, Jill, Rich, Thereasa, Price, Kristin, Patel, Sonia, Zhang, Li, Ibrahim, Faaiz, Esquivel, Mikaela, Van Seventer, Emily, Jarnagin, Joy, Raymond, Victoria, Corvera, Carlos, Hirose, Kenzo, Nakakura, Eric, Corcoran, Ryan, Van Loon, Katherine, and Atreya, Chloe
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Humans ,Colorectal Neoplasms ,Circulating Tumor DNA ,Neoplasm ,Residual ,Female ,Male ,Neoplasm Recurrence ,Local ,Middle Aged ,Aged ,Biomarkers ,Tumor ,Prognosis ,Adult ,Neoplasm Metastasis ,Aged ,80 and over - Abstract
PURPOSE: Minimal residual disease (MRD) detection can identify the recurrence in patients with colorectal cancer (CRC) following definitive treatment. We evaluated a plasma-only MRD assay to predict recurrence and survival in patients with metastatic CRC who underwent curative intent procedures (surgery and/or radiotherapy), with or without (neo)adjuvant chemotherapy. The primary objective of this study was to assess the correlation of postprocedure tumor cell-free DNA detection status with radiographic disease recurrence. EXPERIMENTAL DESIGN: Preprocedure and postprocedure longitudinal samples were collected from 53 patients and analyzed with a multiomic MRD assay detecting circulating tumor DNA (ctDNA) from genomic and epigenomic signals. Preprocedure and postprocedure ctDNA detection correlated with recurrence-free and overall survival (OS). RESULTS: From 52 patients, 230/233 samples were successfully analyzed. At the time of data cutoff, 36 (69.2%) patients recurred with median follow-up of 31 months. Detectable ctDNA was observed in 19/42 patients (45.2%) with ctDNA analyzed 3 weeks postprocedure. ctDNA detection 3 weeks postprocedure was associated with shorter median recurrence-free survival (RFS; HR, 5.27; 95% CI, 2.31-12.0; P < 0.0001) and OS (HR, 12.83; 95% CI, 3.6-45.9; P < 0.0001). Preprocedure ctDNA detection status was not associated with RFS but was associated with improved OS (HR, 4.65; 95% CI, 1.4-15.2; P = 0.0111). Undetectable ctDNA preprocedure had notable long-term OS, >90% 3 years postprocedure. CONCLUSIONS: In this cohort of oligometastatic CRC, detection of ctDNA preprocedure or postprocedure was associated with inferior outcomes even after accounting for known prognostic clinicopathologic variables. This suggests ctDNA may enhance current risk stratification methods helping the evaluation of novel treatments and surveillance strategies toward improving patient outcomes.
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- 2024
31. Melanoma progression and prognostic models drawn from single-cell, spatial maps of benign and malignant tumors.
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Love, Nick, Williams, Claire, Killingbeck, Emily, Merleev, Alexander, Saffari Doost, Mohammad, Yu, Lan, Mcpherson, John, Mori, Hidetoshi, Borowsky, Alexander, Maverakis, Emanual, and Kiuru, Maija
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Humans ,Melanoma ,Prognosis ,Single-Cell Analysis ,Disease Progression ,Gene Expression Regulation ,Neoplastic ,Biomarkers ,Tumor ,Cyclin-Dependent Kinase 2 ,Tumor Microenvironment ,Fatty Acid-Binding Proteins ,Female ,Male ,Skin Neoplasms ,Gene Expression Profiling - Abstract
Melanoma clinical outcomes emerge from incompletely understood genetic mechanisms operating within the tumor and its microenvironment. Here, we used single-cell RNA-based spatial molecular imaging (RNA-SMI) in patient-derived archival tumors to reveal clinically relevant markers of malignancy progression and prognosis. We examined spatial gene expression of 203,472 cells inside benign and malignant melanocytic neoplasms, including melanocytic nevi and primary invasive and metastatic melanomas. Algorithmic cell clustering paired with intratumoral comparative two-dimensional analyses visualized synergistic, spatial gene signatures linking cellular proliferation, metabolism, and malignancy, validated by protein expression. Metastatic niches included up-regulation of CDK2 and FABP5, which independently predicted poor clinical outcome in 473 patients with melanoma via Cox regression analysis. More generally, our work demonstrates a framework for applying single-cell RNA-SMI technology toward identifying gene regulatory landscapes pertinent to cancer progression and patient survival.
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- 2024
32. Circulating KRAS G12D but not G12V is associated with survival in metastatic pancreatic ductal adenocarcinoma.
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Till, Jacob, McDaniel, Lee, Chang, Changgee, Long, Qi, Pfeiffer, Shannon, Lyman, Jaclyn, Padrón, Lacey, Maurer, Deena, Yu, Jia, Spencer, Christine, Gherardini, Pier, Da Silva, Diane, LaVallee, Theresa, Abbott, Charles, Chen, Richard, Boyle, Sean, Bhagwat, Neha, Cannas, Samuele, Sagreiya, Hersh, Li, Wenrui, Yee, Stephanie, Abdalla, Aseel, Wang, Zhuoyang, Yin, Melinda, Ballinger, Dominique, Wissel, Paul, Eads, Jennifer, Karasic, Thomas, Schneider, Charles, ODwyer, Peter, Teitelbaum, Ursina, Reiss, Kim, Rahma, Osama, Fisher, George, Ko, Andrew, Wainberg, Zev, Wolff, Robert, OReilly, Eileen, OHara, Mark, Cabanski, Christopher, Vonderheide, Robert, and Carpenter, Erica
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Humans ,Carcinoma ,Pancreatic Ductal ,Proto-Oncogene Proteins p21(ras) ,Pancreatic Neoplasms ,Female ,Male ,Circulating Tumor DNA ,Middle Aged ,Aged ,Biomarkers ,Tumor ,Prognosis ,Antineoplastic Combined Chemotherapy Protocols ,Mutation ,Progression-Free Survival ,Neoplasm Metastasis - Abstract
While high circulating tumor DNA (ctDNA) levels are associated with poor survival for multiple cancers, variant-specific differences in the association of ctDNA levels and survival have not been examined. Here we investigate KRAS ctDNA (ctKRAS) variant-specific associations with overall and progression-free survival (OS/PFS) in first-line metastatic pancreatic ductal adenocarcinoma (mPDAC) for patients receiving chemoimmunotherapy (PRINCE, NCT03214250), and an independent cohort receiving standard of care (SOC) chemotherapy. For PRINCE, higher baseline plasma levels are associated with worse OS for ctKRAS G12D (log-rank p = 0.0010) but not G12V (p = 0.7101), even with adjustment for clinical covariates. Early, on-therapy clearance of G12D (p = 0.0002), but not G12V (p = 0.4058), strongly associates with OS for PRINCE. Similar results are obtained for the SOC cohort, and for PFS in both cohorts. These results suggest ctKRAS G12D but not G12V as a promising prognostic biomarker for mPDAC and that G12D clearance could also serve as an early biomarker of response.
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- 2024
33. Presentation and Management of Granulomatous Mastitis in the United States: Results of an American Society of Breast Surgeons Registry Study
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Kapoor, Nimmi S, Ryu, Howon, Smith, Linda, Zou, Jingjing, Mitchell, Katrina, and Blair, Sarah L
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Biomedical and Clinical Sciences ,Clinical Sciences ,Clinical Research ,Granulomatous mastitis ,Surgery ,Intralesional steroids ,Cosmesis ,Humans ,Female ,Registries ,Granulomatous Mastitis ,Adult ,Prospective Studies ,United States ,Societies ,Medical ,Middle Aged ,Follow-Up Studies ,Prognosis ,Disease Management ,Aged ,Surgeons ,Combined Modality Therapy ,Oncology and Carcinogenesis ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundGranulomatous mastitis (GM) is a benign, chronic, inflammatory disease lacking clear treatment guidelines. The purpose of this American Society of Breast Surgeons (ASBrS) prospective, multisite registry was to characterize the presentation of GM and identify treatment strategies associated with symptom resolution and optimal cosmesis.MethodsASBrS members entered data into a registry on patient demographics, treatment, symptoms, and cosmesis over a 1-year period. Initial symptoms were graded as mild, moderate, or severe. The Chi-square test and logistic regression were used to identify factors related to symptom improvement and cosmesis.ResultsOverall, 112 patients with a mean age of 36 years were included. More patients were Hispanic (49.1%) and from the Southwest (41.1%), and management included observation (4.5%), medical (70.5%), surgical (5.4%), or combination treatment (19.6%). Immunosuppression was used in 83 patients (74.1%), including 43 patients who received intralesional steroid injections. Patients with severe symptoms were more likely to undergo surgical intervention compared with those with mild or moderate symptoms (21.4% vs. 0% and 7.5%, respectively; p = 0.004). Within 1 year, 85 patients (75.9%) experienced symptom improvement and/or resolution at a median of 3 months. Receipt of immunosuppressive therapy was predictive of improvement or resolution at 1 month (odds ratio 4.22; p = 0.045). One-year physician-assessed cosmesis was excellent or good for 20/35 patients (57.1%) and was not associated with type of treatment or symptom severity.ConclusionAlthough GM can have a protracted course, the majority of patients in this registry resolved within 1 year, with good cosmetic result. Treatment with immunosuppression appears to be most beneficial, and a symptom-based algorithm may be helpful to guide treatment.
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- 2024
34. Correlation Between Pre-Operative Diffusion Tensor Imaging Indices and Post-Operative Outcome in Degenerative Cervical Myelopathy: A Systematic Review and Meta-Analysis.
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Mohammadi, Mohammad, Roohollahi, Faramarz, Mahmoudi, Mohamad, Mohammadi, Aynaz, Mohamadi, Mobin, Kankam, Samuel, Ghamari Khameneh, Afshar, Baghdasaryan, Davit, Farahbakhsh, Farzin, Martin, Allan, Harrop, James, and Rahimi-Movaghar, Vafa
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clinical outcome ,degenerative cervical myelopathy ,diffusion tensor imaging ,prognosis - Abstract
STUDY DESIGN: Systematic review. OBJECTIVES: The correlation between pre-operative diffusion tensor imaging (DTI) metrics and post-operative clinical outcomes in patients with degenerative cervical myelopathy (DCM) has been widely investigated with different studies reporting varied findings. We conducted a systematic review to determine the association between DTI metric and clinical outcomes after surgery. METHODS: We identified relevant articles that investigated the relationship between pre-operative DTI indices and post-operative outcome in DCM patients by searching PubMed/MEDLINE, Web of Science, Scopus, and EMBASE from inception until October 2023. In addition, quantitative synthesis and meta-analyses were performed. RESULTS: FA was significantly correlated with postoperative JOA or mJOA across all age and follow up subgroups, changes observed in JOA or mJOA from preoperative to postoperative stages (Δ JOA or Δ mJOA) in subgroups aged 65 and above and in those with a follow-up period of 6 months or more, as well as recovery rate in all studies pooled together and also in the under-65 age bracket. Additionally, a significant correlation was demonstrated between recovery rate and ADC across all age groups. No other significant correlations were discovered between DTI parameters (MD, AD, and ADC) and post-operative outcomes. CONCLUSION: DTI is a quantitative noninvasive evaluation tool that correlates with severity of DCM. However, the current evidence is still elusive regarding whether DTI metric is a validated tool for predicting the degree of post-operative recovery, which could potentially be useful in patient selection for surgery.
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- 2024
35. Clinical, Cultural, Computational, and Regulatory Considerations to Deploy AI in Radiology: Perspectives of RSNA and MICCAI Experts.
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Linguraru, Marius, Bakas, Spyridon, Aboian, Mariam, Chang, Peter, Flanders, Adam, Kalpathy-Cramer, Jayashree, Kitamura, Felipe, Lungren, Matthew, Mongan, John, Prevedello, Luciano, Summers, Ronald, Wu, Carol, Adewole, Maruf, and Kahn, Charles
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Adults and Pediatrics ,Computer Applications–General (Informatics) ,Diagnosis ,Prognosis ,Artificial Intelligence ,Humans ,Radiology ,Societies ,Medical - Abstract
The Radiological Society of North of America (RSNA) and the Medical Image Computing and Computer Assisted Intervention (MICCAI) Society have led a series of joint panels and seminars focused on the present impact and future directions of artificial intelligence (AI) in radiology. These conversations have collected viewpoints from multidisciplinary experts in radiology, medical imaging, and machine learning on the current clinical penetration of AI technology in radiology and how it is impacted by trust, reproducibility, explainability, and accountability. The collective points-both practical and philosophical-define the cultural changes for radiologists and AI scientists working together and describe the challenges ahead for AI technologies to meet broad approval. This article presents the perspectives of experts from MICCAI and RSNA on the clinical, cultural, computational, and regulatory considerations-coupled with recommended reading materials-essential to adopt AI technology successfully in radiology and, more generally, in clinical practice. The report emphasizes the importance of collaboration to improve clinical deployment, highlights the need to integrate clinical and medical imaging data, and introduces strategies to ensure smooth and incentivized integration. Keywords: Adults and Pediatrics, Computer Applications-General (Informatics), Diagnosis, Prognosis © RSNA, 2024.
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- 2024
36. Ascites Is a Poor Prognostic Factor in Advanced Pancreatic Adenocarcinoma and May Be Undertreated: A Prospective Cohort Study.
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Wang, Justin, Cui, Yujie, Osipov, Arsen, Gong, Jun, Pandol, Stephen, Lo, Simon, Nissen, Nicholas, Abbas, Anser, Levi, Abrahm, and Hendifar, Andrew
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Humans ,Ascites ,Male ,Female ,Prospective Studies ,Aged ,Middle Aged ,Pancreatic Neoplasms ,Prognosis ,Carcinoma ,Pancreatic Ductal ,Diuretics ,Serum Albumin ,Aged ,80 and over ,Catheters ,Indwelling - Abstract
INTRODUCTION: Pancreatic ductal adenocarcinoma is associated with significant morbidity and mortality as most patients present with advanced disease. The development of ascites has been associated with poor outcomes and further characterization and contemporary management strategies are needed. METHODS: A total of 437 patients enrolled in the Gastrointestinal Biobank at Cedars-Sinai Medical Center who had epithelial pancreatic malignancy were included in the prospective cohort group. Overall, 41.7% of patients included in this study developed ascites. Most patients with ascites (>80%) had high serum-ascites albumin gradient ascites. In both univariate and multivariate analysis, a history of ≥1 form of chemotherapy was significantly associated with ascites. Estimated median overall survival in patients with ascites was significantly lower than in patients without ascites, 473 days vs 573 days, and ascites had a hazard ratio of 1.37. RESULTS: Patients with ascites who received diuretics and indwelling peritoneal catheter had an estimated median survival of 133 days from diagnosis of ascites, and those who received only the indwelling peritoneal catheter without diuretics had an estimated median survival of only 54 days. The estimated median survival from the diagnosis of ascites was 92 days, and the median time to puncture was 7 days. The median time from first tap to death was 45 days. DISCUSSION: The use of diuretics is lower than would be expected for patients with pancreatic ductal adenocarcinoma with elevated serum-ascites albumin gradient. Other therapies such as beta blockers should be investigated in this subset of patients. The etiology of ascites in these patients is poorly understood, and further research is needed to establish treatment guidelines and improve outcomes.
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- 2024
37. Spatial multiomics of arterial regions from cardiac allograft vasculopathy rejected grafts reveal novel insights into the pathogenesis of chronic antibody-mediated rejection.
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Nevarez-Mejia, Jessica, Pickering, Harry, Sosa, Rebecca, Valenzuela, Nicole, Fishbein, Gregory, Baldwin, William, Fairchild, Robert, and Reed, Elaine
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Heart Transplantation ,Graft Rejection ,Humans ,Male ,Allografts ,Isoantibodies ,Middle Aged ,Female ,Transcriptome ,Neointima ,Graft Survival ,Prognosis ,Follow-Up Studies ,Gene Expression Profiling ,Biomarkers ,Tissue Donors ,Vascular Diseases ,Multiomics - Abstract
Cardiac allograft vasculopathy (CAV) causes late graft failure and mortality after heart transplantation. Donor-specific antibodies (DSAs) lead to chronic endothelial cell injury, inflammation, and arterial intimal thickening. In this study, GeoMx digital spatial profiling was used to analyze arterial areas of interest (AOIs) from CAV+DSA+ rejected cardiac allografts (N = 3; 22 AOIs total). AOIs were categorized based on CAV neointimal thickening and underwent whole transcriptome and protein profiling. By comparing our transcriptomic data with that of healthy control vessels of rapid autopsy myocardial tissue, we pinpointed specific pathways and transcripts indicative of heightened inflammatory profiles in CAV lesions. Moreover, we identified protein and transcriptomic signatures distinguishing CAV lesions exhibiting low and high neointimal lesions. AOIs with low neointima showed increased markers for activated inflammatory infiltrates, endothelial cell activation transcripts, and gene modules involved in metalloproteinase activation and TP53 regulation of caspases. Inflammatory and apoptotic proteins correlated with inflammatory modules in low neointima AOIs. High neointima AOIs exhibited elevated TGFβ-regulated transcripts and modules enriched for platelet activation/aggregation. Proteins associated with growth factors/survival correlated with modules enriched for proliferation/repair in high neointima AOIs. Our findings reveal novel insight into immunological mechanisms mediating CAV pathogenesis.
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- 2024
38. Serologic extracellular matrix remodeling markers are related to fibrosis stage and prognosis in a phase 2b trial of simtuzumab in patients with primary sclerosing cholangitis.
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Thorburn, Douglas, Leeming, Diana, Barchuk, William, Wang, Ya, Lu, Xiaomin, Malkov, Vladislav, Ito, Kaori, Bowlus, Christopher, Levy, Cynthia, Goodman, Zachary, Karsdal, Morten, Muir, Andrew, and Xu, Jun
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Humans ,Cholangitis ,Sclerosing ,Male ,Female ,Biomarkers ,Prognosis ,Adult ,Liver Cirrhosis ,Antibodies ,Monoclonal ,Humanized ,Middle Aged ,Extracellular Matrix ,Disease Progression ,Severity of Illness Index ,Hyaluronic Acid ,Liver - Abstract
BACKGROUND: Novel noninvasive predictors of disease severity and prognosis in primary sclerosing cholangitis (PSC) are needed. This study evaluated the ability of extracellular matrix remodeling markers to diagnose fibrosis stage and predict PSC-related fibrosis progression and clinical events. METHODS: Liver histology and serum markers of collagen formation (propeptide of type III collagen [Pro-C3], propeptide of type IV collagen, propeptide of type V collagen), collagen degradation (type III collagen matrix metalloproteinase degradation product and type IV collagen matrix metalloproteinase degradation product), and fibrosis (enhanced liver fibrosis [ELF] score and its components [metalloproteinase-1, type III procollagen, hyaluronic acid]) were assessed in samples from baseline to week 96 in patients with PSC enrolled in a study evaluating simtuzumab (NCT01672853). Diagnostic performance for advanced fibrosis (Ishak stages 3-6) and cirrhosis (Ishak stages 5-6) was evaluated by logistic regression and AUROC. Prognostic performance for PSC-related clinical events and fibrosis progression was assessed by AUROC and Wilcoxon rank-sum test. RESULTS: Among 234 patients, 51% had advanced fibrosis and 11% had cirrhosis at baseline. Baseline Pro-C3 and ELF score and its components provided moderate diagnostic ability for discrimination of advanced fibrosis (AUROC 0.73-0.78) and cirrhosis (AUROC 0.73-0.81). Baseline Pro-C3, ELF score, and type III procollagen provided a moderate prognosis for PSC-related clinical events (AUROC 0.70-0.71). Among patients without cirrhosis at baseline, median changes in Pro-C3 and ELF score to week 96 were higher in those with than without progression to cirrhosis (both p < 0.001). CONCLUSIONS: Pro-C3 correlated with fibrosis stage, and Pro-C3 and ELF score provided discrimination of advanced fibrosis and cirrhosis and predicted PSC-related events and fibrosis progression. The results support the clinical utility of Pro-C3 and ELF score for staging and as prognostic markers in PSC.
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- 2024
39. Machine learning predicts cerebral vasospasm in patients with subarachnoid haemorrhage.
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Zarrin, David, Suri, Abhinav, McCarthy, Karen, Gaonkar, Bilwaj, Wilson, Bayard, Colby, Geoffrey, Freundlich, Robert, and Gabel, Eilon
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Cerebral vasospasm ,Machine learning ,Prediction ,Verapamil ,Humans ,Subarachnoid Hemorrhage ,Vasospasm ,Intracranial ,Machine Learning ,Female ,Male ,Middle Aged ,Verapamil ,Aged ,ROC Curve ,Adult ,Prognosis ,Intensive Care Units - Abstract
BACKGROUND: Cerebral vasospasm (CV) is a feared complication which occurs after 20-40% of subarachnoid haemorrhage (SAH). It is standard practice to admit patients with SAH to intensive care for an extended period of resource-intensive monitoring. We used machine learning to predict CV requiring verapamil (CVRV) in the largest and only multi-center study to date. METHODS: Patients with SAH admitted to UCLA from 2013 to 2022 and a validation cohort from VUMC from 2018 to 2023 were included. For each patient, 172 unique intensive care unit (ICU) variables were extracted through the primary endpoint, namely first verapamil administration or no verapamil. At each institution, a light gradient boosting machine (LightGBM) was trained using five-fold cross validation to predict the primary endpoint at various hospitalization timepoints. FINDINGS: A total of 1750 patients were included from UCLA, 125 receiving verapamil. LightGBM achieved an area under the ROC (AUC) of 0.88 > 1 week in advance and ruled out 8% of non-verapamil patients with zero false negatives. Our models predicted no CVRV vs CVRV within three days vs CVRV after three days with AUCs = 0.88, 0.83, and 0.88, respectively. From VUMC, 1654 patients were included, 75 receiving verapamil. VUMC predictions averaged within 0.01 AUC points of UCLA predictions. INTERPRETATION: We present an accurate and early predictor of CVRV using machine learning with multi-center validation. This represents a significant step towards optimized clinical management and resource allocation in patients with SAH. FUNDING: Robert E. Freundlich is supported by National Center for Advancing Translational Sciences federal grant UL1TR002243 and National Heart, Lung, and Blood Institute federal grant K23HL148640; these funders did not play any role in this study. The National Institutes of Health supports Vanderbilt University Medical Center which indirectly supported these research efforts. Neither this study nor any other authors personally received financial support for the research presented in this manuscript. No support from pharmaceutical companies was received.
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- 2024
40. Thoracic versus coronary calcification for atherosclerotic cardiovascular disease events prediction
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Ichikawa, Keishi, Wang, Rui, McClelland, Robyn L, Manubolu, Venkat S, Susarla, Shriraj, Lee, Duo, Pourafkari, Leili, Fazlalizadeh, Hooman, Bitar, Jairo Aldana, Robin, Rick, Kinninger, April, Roy, Sion, Post, Wendy S, and Budoff, Matthew
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Biomedical and Clinical Sciences ,Clinical Sciences ,Prevention ,Heart Disease ,Clinical Research ,Heart Disease - Coronary Heart Disease ,Aging ,Atherosclerosis ,Women's Health ,Cardiovascular ,Good Health and Well Being ,Humans ,Male ,Female ,Aged ,Vascular Calcification ,Coronary Artery Disease ,Prognosis ,Middle Aged ,Risk Assessment ,Computed Tomography Angiography ,Predictive Value of Tests ,Aorta ,Thoracic ,Risk Factors ,Aortic Diseases ,ROC Curve ,Coronary Vessels ,Cardiac-Gated Imaging Techniques ,United States ,Electrocardiography ,Incidence ,Coronary Angiography ,Tomography ,X-Ray Computed ,Cardiorespiratory Medicine and Haematology ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology ,Clinical sciences - Abstract
This study compared the prognostic value of quantified thoracic artery calcium (TAC) including aortic arch on chest CT and coronary artery calcium (CAC) score on ECG-gated cardiac CT.MethodsA total of 2412 participants who underwent both chest CT and ECG-gated cardiac CT at the same period were included in the Multi-Ethnic Study of Atherosclerosis Exam 5. All participants were monitored for incident atherosclerotic cardiovascular disease (ASCVD) events. TAC is defined as calcification in the ascending aorta, aortic arch and descending aorta on chest CT. The quantification of TAC was measured using the Agatston method. Time-dependent receiver-operating characteristic (ROC) curves were used to compare the prognostic value of TAC and CAC scores.ResultsParticipants were 69±9 years of age and 47% were male. The Spearman correlation between TAC and CAC scores was 0.46 (p
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- 2024
41. AI-enabled cardiac chambers volumetry in coronary artery calcium scans (AI-CACTM) predicts heart failure and outperforms NT-proBNP: The multi-ethnic study of Atherosclerosis
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Naghavi, Morteza, Reeves, Anthony, Budoff, Matthew, Li, Dong, Atlas, Kyle, Zhang, Chenyu, Atlas, Thomas, Roy, Sion K, Henschke, Claudia I, Wong, Nathan D, Defilippi, Christopher, Levy, Daniel, and Yankelevitz, David F
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Biomedical and Clinical Sciences ,Cardiovascular Medicine and Haematology ,Clinical Sciences ,Heart Disease ,Aging ,Cardiovascular ,Networking and Information Technology R&D (NITRD) ,Prevention ,Heart Disease - Coronary Heart Disease ,Machine Learning and Artificial Intelligence ,Atherosclerosis ,Humans ,Female ,Male ,Peptide Fragments ,Natriuretic Peptide ,Brain ,Aged ,Heart Failure ,Predictive Value of Tests ,Coronary Artery Disease ,Middle Aged ,Risk Factors ,Biomarkers ,Vascular Calcification ,Risk Assessment ,Prognosis ,United States ,Time Factors ,Incidence ,Aged ,80 and over ,Computed Tomography Angiography ,Artificial Intelligence ,Coronary Angiography ,Radiographic Image Interpretation ,Computer-Assisted ,Reproducibility of Results ,Multidetector Computed Tomography ,Asymptomatic Diseases ,Artificial intelligence ,Coronary artery calcium ,Heart failure ,Left ventricular volume ,NT-proBNP ,Cardiorespiratory Medicine and Haematology ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology ,Clinical sciences ,Applied computing - Abstract
IntroductionCoronary artery calcium (CAC) scans contain useful information beyond the Agatston CAC score that is not currently reported. We recently reported that artificial intelligence (AI)-enabled cardiac chambers volumetry in CAC scans (AI-CAC™) predicted incident atrial fibrillation in the Multi-Ethnic Study of Atherosclerosis (MESA). In this study, we investigated the performance of AI-CAC cardiac chambers for prediction of incident heart failure (HF).MethodsWe applied AI-CAC to 5750 CAC scans of asymptomatic individuals (52% female, White 40%, Black 26%, Hispanic 22% Chinese 12%) free of known cardiovascular disease at the MESA baseline examination (2000-2002). We used the 15-year outcomes data and compared the time-dependent area under the curve (AUC) of AI-CAC volumetry versus NT-proBNP, Agatston score, and 9 known clinical risk factors (age, gender, diabetes, current smoking, hypertension medication, systolic and diastolic blood pressure, LDL, HDL for predicting incident HF over 15 years.ResultsOver 15 years of follow-up, 256 HF events accrued. The time-dependent AUC [95% CI] at 15 years for predicting HF with AI-CAC all chambers volumetry (0.86 [0.82,0.91]) was significantly higher than NT-proBNP (0.74 [0.69, 0.77]) and Agatston score (0.71 [0.68, 0.78]) (p
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- 2024
42. Difelikefalin improves itch-related sleep disruption in patients undergoing haemodialysis.
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Weiner, Daniel, Schaufler, Thilo, McCafferty, Kieran, Kalantar-Zadeh, Kamyar, Germain, Michael, Ruessmann, Despina, Morin, Isabelle, Menzaghi, Frédérique, Wen, Warren, and Ständer, Sonja
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chronic kidney disease–associated pruritus ,difelikefalin ,haemodialysis ,itch ,sleep ,Humans ,Pruritus ,Renal Dialysis ,Male ,Female ,Middle Aged ,Quality of Life ,Aged ,Double-Blind Method ,Sleep Wake Disorders ,Renal Insufficiency ,Chronic ,Follow-Up Studies ,Prognosis ,Sleep Quality ,Piperidines - Abstract
BACKGROUND: Poor sleep quality is associated with higher mortality and lower quality of life in patients with chronic kidney disease-associated pruritus (CKD-aP). Difelikefalin reduces itch in patients with CKD-aP undergoing haemodialysis (HD). This post hoc analysis of the Phase 3 difelikefalin studies (Study 3105 and the pooled dataset from KALM-1 and KALM-2) evaluated whether itch reduction in individuals with CKD-aP improved sleep quality. METHODS: Itch intensity was assessed in patients undergoing HD who had moderate-to-severe CKD-aP treated with intravenous difelikefalin (0.5 µg/kg, three times weekly) (N = 222, Study 3105; N = 426, KALM-1 and -2) or placebo (N = 425, KALM-1 and -2) for 12 weeks, using the Worst Itch Intensity Numerical Rating Scale (WI-NRS). Sleep quality was assessed using the sleep disability question of the 5-D Itch Scale (5-D SDQ) in all studies and, in Study 3105, with the Sleep Quality Numeric Rating Scale (SQ-NRS). RESULTS: Greater improvements in sleep quality were observed in patients with ≥3-point versus
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- 2024
43. Lipoprotein(a), Oxidized Phospholipids, and Progression to Symptomatic Heart Failure: The CASABLANCA Study.
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Januzzi, James, van Kimmenade, Roland, Liu, Yuxi, Hu, Xingdi, Browne, Auris, Plutzky, Jorge, Tsimikas, Sotirios, Blankstein, Ron, and Natarajan, Pradeep
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heart failure ,lipoprotein(a) ,outcomes ,Humans ,Heart Failure ,Female ,Male ,Disease Progression ,Aged ,Lipoprotein(a) ,Middle Aged ,Phospholipids ,Oxidation-Reduction ,Biomarkers ,Risk Factors ,Time Factors ,Prospective Studies ,Risk Assessment ,Incidence ,Coronary Angiography ,Prognosis - Abstract
BACKGROUND: Higher lipoprotein(a) and oxidized phospholipid concentrations are associated with increased risk for coronary artery disease and valvular heart disease. The role of lipoprotein(a) or oxidized phospholipid as a risk factor for incident heart failure (HF) or its complications remains uncertain. METHODS AND RESULTS: A total of 1251 individuals referred for coronary angiography in the Catheter Sampled Blood Archive in Cardiovascular Diseases (CASABLANCA) study were stratified on the basis of universal definition of HF stage; those in stage A/B (N=714) were followed up for an average 3.7 years for incident stage C/D HF or the composite of HF/cardiovascular death. During follow-up, 105 (14.7%) study participants in stage A/B progressed to symptomatic HF and 57 (8.0%) had cardiovascular death. In models adjusted for multiple HF risk factors, including severe coronary artery disease and aortic stenosis, individuals with lipoprotein(a) ≥150 nmol/L were at higher risk for progression to symptomatic HF (hazard ratio [HR], 1.90 [95% CI, 1.15-3.13]; P=0.01) or the composite of HF/cardiovascular death (HR, 1.71 [95% CI, 1.10-2.67]; P=0.02). These results remained significant after further adjustment of the model to include prior myocardial infarction (HF: HR, 1.89, P=0.01; HF/cardiovascular death: HR, 1.68, P=0.02). Elevated oxidized phospholipid concentrations were similarly associated with risk, particularly when added to higher lipoprotein(a). In Kaplan-Meier analyses, individuals with stage A/B HF and elevated lipoprotein(a) had shorter time to progression to stage C/D HF or HF/cardiovascular death (both log-rank P
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- 2024
44. Low Stroke Volume Predicts Deterioration in Intermediate-Risk Pulmonary Embolism: Prospective Study
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Weekes, Anthony J., Hambright, Parker, Trautmann, Ariana, Ali, Shane, Pikus, Angela, Wellinsky, Nicole, Shah, Sanjeev, and O'Connell, Nathaniel
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pulmonary embolism ,Risk ,Outcome ,Prognosis ,Stroke Volume ,Echocardiography - Abstract
Introduction: Prognosis and management of patients with intermediate-risk pulmonary embolism (PE) is challenging. We investigated whether stroke volume may be used to identify the subset of this population at increased risk of clinical deterioration or PE-related death. Our secondary objective was to compare echocardiographic measurements of patients who received escalated interventions vs anticoagulation monotherapy.Methods: We selected patients with intermediate-risk PE, who had comprehensive echocardiography within 18 hours of PE diagnosis and before any escalated interventions, from a PE registry populated by 11 emergency departments. Echocardiographers measured right ventricle (RV) size, tricuspid annular plane systolic excursion (TAPSE), and stroke volume (SV) using velocity time integral (VTI) by left ventricular (LV) outflow tract Doppler or two-dimensional method of discs (MOD). The primary outcome was a composite of PE-related death, cardiac arrest, catecholamine administration for sustained hypotension, or emergency respiratory intervention during the index hospitalization. Secondary outcome was escalated intervention with reperfusion or extracorporeal membrane oxygenation therapy.Results: Of 370 intermediate-risk PE patients (mean age 64.0 ± 15.5 years, 38.1% male), 39 (10.5%) had the primary outcome. These 39 patients had lower mean SV regardless of measurement method than those without the primary outcome: SV MOD 36.2 vs 49.9 milliliters (mL), P < 0.001; SV Doppler 41.7 vs 57.2 mL, P = 0.003; VTI 13.6 vs 17.9 centimeters [cm], P = 0.003. Patients with primary outcome also had lower mean TAPSE than those without (1.54 vs 1.81 cm, P = 0.003). Multivariable models, selecting SV as predictor, had area under the receiver operating curve of 0.8 and Brier score 0.08. The best echocardiographic predictor of our primary outcome was SV MOD (odds ratio 0.72 [0.53, 0.94], P = 0.02). Patients who received escalated interventions had significantly lower SV or surrogate measurements, greater RV dilatation, and lower RV systolic function than patients who received anticoagulation monotherapy.Conclusion: Low stroke volume was a predictor of clinical deterioration and PE-related death. Low SV may be used to identify a subset of intermediate-risk PE patients, who are higher risk (intermediate-high risk), and for whom escalated interventions should be considered.
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- 2024
45. Association Between Coronary Assessment in Heart Failure and Clinical Outcomes Within a Safety-Net Setting Using a Target Trial Emulation Observational Design
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Durstenfeld, Matthew S, Thakkar, Anjali, Ma, Yifei, Zier, Lucas S, Davis, Jonathan D, and Hsue, Priscilla Y
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Public Health ,Health Sciences ,Prevention ,Aging ,Clinical Research ,Women's Health ,Heart Disease - Coronary Heart Disease ,Heart Disease ,Cardiovascular ,Patient Safety ,Clinical Trials and Supportive Activities ,Atherosclerosis ,Health Services ,4.2 Evaluation of markers and technologies ,Good Health and Well Being ,Humans ,Female ,Male ,Middle Aged ,Heart Failure ,Aged ,San Francisco ,Time Factors ,Risk Factors ,Coronary Angiography ,Risk Assessment ,Safety-net Providers ,Electronic Health Records ,Predictive Value of Tests ,Cause of Death ,Coronary Artery Disease ,Prognosis ,Comparative Effectiveness Research ,angiography ,coronary artery disease ,disparities ,heart failure ,mortality ,Cardiorespiratory Medicine and Haematology ,Public Health and Health Services ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology ,Public health - Abstract
BackgroundIschemic cardiomyopathy is the leading cause of heart failure (HF). Most patients do not undergo coronary assessment after HF diagnosis. There are no randomized clinical trials of coronary assessment after HF diagnosis.MethodsUsing an electronic health record cohort of all individuals with HF within the San Francisco Health Network from 2001 to 2019, we identified factors associated with coronary assessment. Then, we studied the association of coronary assessment within 30 days of HF diagnosis with all-cause mortality and a composite of mortality and emergent angiography using a target trial emulation observational comparative-effectiveness approach. Target trial emulation is an approach to causal inference based on creating a hypothetical randomized clinical trial protocol and using observational data to emulate the protocol. We used propensity scores for covariate adjustment. We used national death records to improve the ascertainment of mortality and included falsification end points for the cause of death.ResultsAmong 14 829 individuals with HF (median, 62 years old; 5855 [40%] women), 3987 (26.9%) ever completed coronary assessment, with 2467/13 301 (18.5%) with unknown coronary artery disease status at HF diagnosis assessed. Women, older individuals, and people without stable housing were less likely to complete coronary assessment. Among 5972 eligible persons of whom 627 underwent early elective coronary assessment, coronary assessment was associated with lower mortality (hazard ratio, 0.84 [95% CI, 0.72-0.97]; P=0.025), reduced risk of the composite outcome (hazard ratio, 0.86 [95% CI, 0.73-1.00]), higher rates of revascularization (odds ratio, 7.6 [95% CI, 5.4-10.6]), and higher use of medical therapy (odds ratio, 2.5 [95% CI, 1.7-3.6]), but not the falsification end points.ConclusionsIn a safety-net population, disparities in coronary assessment after HF diagnosis are not fully explained by coronary artery disease risk factors. Early coronary assessment is associated with improved HF outcomes possibly related to higher rates of revascularization and guideline-directed medical therapy but with low certainty that this finding is not attributable to unmeasured confounding.
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- 2024
46. Biochemical recurrence in patients with prostate cancer after primary definitive therapy: treatment based on risk stratification.
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Shore, Neal, Moul, Judd, Pienta, Kenneth, King, Martin, Freedland, Stephen, and Czernin, Johannes
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Humans ,Male ,Prostatic Neoplasms ,Neoplasm Recurrence ,Local ,Risk Assessment ,Prostatectomy ,Prostate-Specific Antigen ,Salvage Therapy ,Prognosis ,Androgen Antagonists - Abstract
BACKGROUND: Nearly one-third of patients with prostate cancer (PCa) experience biochemical recurrence (BCR) after primary definitive treatment. BCR increases the risk of distant metastasis and mortality in patients with prognostically unfavorable features. These patients are best managed with a tailored treatment strategy incorporating risk stratification using clinicopathological factors, next-generation imaging, and genomic testing. OBJECTIVE: This narrative review examines the utility of risk stratification for the management of patients with BCR in the context of clinical trial data, referencing the latest recommendations by European and US medical societies. METHODS: PubMed was searched for relevant studies published through May 21 2023 on treatment of patients with BCR after radical prostatectomy (RP) or external beam radiotherapy (EBRT). RESULTS: European and US guidelines support the risk-stratified management of BCR. Post-RP, salvage EBRT (with or without androgen deprivation therapy [ADT]) is an accepted treatment option for patients with BCR. Post-EBRT, local salvage therapies (RP, cryotherapy, high-intensity focused ultrasound, stereotactic body radiotherapy, and low-dose-rate and high-dose-rate brachytherapy) have demonstrated comparable relapse-free survival rates but differing adverse event profiles, short and long term. Local salvage therapies should be used for local-only relapses while ADT should be considered for regional or distant relapses. In practice, patients often receive ADT, with varying guidance for intermittent ADT vs. continuous ADT, due to consideration of quality-of-life effects. CONCLUSIONS: Despite a lack of consensus for BCR treatment among guideline associations and medical societies, risk stratification of patients is essential for personalized treatment approaches, as it allows for an informed selection of therapeutic strategies and estimation of adverse events. In lower-risk disease, observation is recommended while in higher-risk disease, after failed repeat local therapy, ADT and/or clinical trial enrollment may be appropriate. Results from ongoing clinical studies of patients with BCR should provide consensus for management.
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- 2024
47. The predictive value of sepsis scores for in-hospital mortality in patients with left-sided infective endocarditis
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de Almeida, Bianca Leal, Strabelli, Tania Mara Varejao, Bittencourt, Marcio Sommer, de Oliveira, Vítor Falcao, Gualandro, Danielle Menosi, Mansur, Alfredo Jose, Tarasouchi, Flavio, Pocebon, Lucas, Paixao, Milena, Goldemberg, Flora, Salomao, Reinaldo, and Siciliano, Rinaldo Focaccia
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- 2024
48. A Prognostic Model Based on Cisplatin-Resistance Related Genes in Oral Squamous Cell Carcinoma.
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Rong Lu, Qian Yang, Siyu Liu, and Lu Sun
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SQUAMOUS cell carcinoma ,PROGNOSTIC models ,GENE expression ,KILLER cells ,GENES - Abstract
Purpose: To screen for the cisplatin resistance-related prognostic signature in oral squamous cell carcinoma (OSCC) and assess its correlation with the immune microenvironment. Materials and Methods: The gene expression data associated with OSCC and cisplatin-resistance were downloaded from TCGA and GEO databases. Cisplatin-resistant genes were selected through taking the intersection of differentially expressed genes (DEGs) between tumor and control groups as well as between cisplatin-resistant samples and parental samples. Then, prognosis-related cisplatin-resistant genes were further selected by univariate Cox regression and LASSO regression analyses to construct a survival prognosis model. A GSEA (gene set enrichment analysis) between two risk groups was conducted with the MSigDB v7.1 database. Finally, the immune landscape of the sample was studied using CIBERSORT. The IC50 values of 57 drugs were predicted using pRRophetic 0.5. Results: A total 230 candidate genes were obtained. Then 7 drug-resistant genes were selected for prognostic risk-score (RS) signature construction using LASSO regression analysis, including STC2, TBC1D2, ADM, NDRG1, OLR1, PDGFA and ANO1. RS was an independent prognostic factor. Additionally, a nomogram model was established to predict the 1-, 2-, and 3-year survival rates of samples. The GSEA identified several differential pathways between two risk groups, such as EMT, hypoxia, and oxidative phosphorylation. Fifteen immune cells were statistically significantly different in infiltration level between the two groups, such as macrophages M2, and resting NK cells. A total of 57 drugs had statistically significantly different IC50 values between two risk groups. Conclusion: These model genes and immune cells may play a role in predicting the prognosis and chemoresistance in OSCC. [ABSTRACT FROM AUTHOR]
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- 2024
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49. Atherosclerosis evaluation and cardiovascular risk estimation using coronary computed tomography angiography.
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Nurmohamed, Nick, van Rosendael, Alexander, Danad, Ibrahim, Ngo-Metzger, Quyen, Taub, Pam, Ray, Kausik, Figtree, Gemma, Bonaca, Marc, Hsia, Judith, Rodriguez, Fatima, Sandhu, Alexander, Nieman, Koen, Earls, James, Hoffmann, Udo, Bax, Jeroen, Min, James, Maron, David, and Bhatt, Deepak
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Atherosclerotic cardiovascular disease ,Coronary artery disease ,Coronary computed tomography angiography ,Major adverse cardiovascular events ,Prevention ,Humans ,Computed Tomography Angiography ,Coronary Artery Disease ,Risk Assessment ,Coronary Angiography ,Plaque ,Atherosclerotic ,Heart Disease Risk Factors ,Prognosis ,Coronary Stenosis - Abstract
Clinical risk scores based on traditional risk factors of atherosclerosis correlate imprecisely to an individuals complex pathophysiological predisposition to atherosclerosis and provide limited accuracy for predicting major adverse cardiovascular events (MACE). Over the past two decades, computed tomography scanners and techniques for coronary computed tomography angiography (CCTA) analysis have substantially improved, enabling more precise atherosclerotic plaque quantification and characterization. The accuracy of CCTA for quantifying stenosis and atherosclerosis has been validated in numerous multicentre studies and has shown consistent incremental prognostic value for MACE over the clinical risk spectrum in different populations. Serial CCTA studies have advanced our understanding of vascular biology and atherosclerotic disease progression. The direct disease visualization of CCTA has the potential to be used synergistically with indirect markers of risk to significantly improve prevention of MACE, pending large-scale randomized evaluation.
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- 2024
50. Rational combination platform trial design for children and young adults with diffuse midline glioma: A report from PNOC.
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Plasschaert, Sabine, Molinaro, Annette, Koschmann, Carl, Nazarian, Javad, Mueller, Sabine, Kline, Cassie, Franson, Andrea, van der Lugt, Jasper, Prados, Michael, and Waszak, Sebastian
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ONC201 ,clinical trials ,diffuse midline glioma ,paxalisib ,pediatric neuro-oncology ,Humans ,Glioma ,Brain Neoplasms ,Child ,Young Adult ,Adolescent ,Antineoplastic Combined Chemotherapy Protocols ,Pyrimidines ,Adult ,Female ,Research Design ,Prognosis ,Male ,Quality of Life - Abstract
Background Diffuse midline glioma (DMG) is a devastating pediatric brain tumor unresponsive to hundreds of clinical trials. Approximately 80% of DMGs harbor H3K27M oncohistones, which reprogram the epigenome to increase the metabolic profile of the tumor cells. Methods We have previously shown preclinical efficacy of targeting both oxidative phosphorylation and glycolysis through treatment with ONC201, which activates the mitochondrial protease ClpP, and paxalisib, which inhibits PI3K/mTOR, respectively. Results ONC201 and paxalisib combination treatment aimed at inducing metabolic distress led to the design of the first DMG-specific platform trial PNOC022 (NCT05009992). Conclusions Here, we expand on the PNOC022 rationale and discuss various considerations, including liquid biome, microbiome, and genomic biomarkers, quality-of-life endpoints, and novel imaging modalities, such that we offer direction on future clinical trials in DMG.
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- 2024
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