32 results on '"Prakhar Agrawal"'
Search Results
2. Identification of Novel, Potent, and Selective Compounds against Malaria Using Glideosomal-Associated Protein 50 as a Drug Target
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Prakhar Agrawal, Surekha Kumari, Asif Mohmmed, Pawan Malhotra, Upendra Sharma, and Dinkar Sahal
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Chemistry ,QD1-999 - Published
- 2023
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3. Structure-based identification of small-molecule inhibitors that target the DIII domain of the Dengue virus glycoprotein E pan-serotypically.
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Prakhar Agrawal, Hemant Arya, and Ganesan Senthil Kumar
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Medicine ,Science - Abstract
Dengue viral infection is caused by the Dengue virus, which spreads to humans through the bite of infected mosquitos. Dengue affects over half of the global population, with an estimated 500 million infections per year. Despite this, no effective treatment is currently available, however, several promising candidates are undergoing pre-clinical/clinical testing. The existence of four major serotypes is an important challenge in the development of drugs and vaccines to combat Dengue virus infection. Hence, the drug/vaccine thereby developed should neutralize all the four serotypes equally. However, there is no pan-serotype specific treatment for Dengue virus, thereby emphasizing the need for the identification of novel drug-like compounds that can target all serotypes of the Dengue virus equally. To this end, we employed virtual screening methodologies to find drug-like compounds that target the domain III of glycoprotein E. Most importantly, domain III of E protein is involved in viral fusion with the host membrane and is also targeted by neutralizing antibodies. Our study found two small molecule drug-like compounds (out of the 3 million compounds screened) having similar binding affinity with all four serotypes. The compounds thereby identified exhibit favourable drug like properties and can be developed as a treatment for Dengue virus.
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- 2024
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4. Plasmodium falciparum PhIL1-associated complex plays an essential role in merozoite reorientation and invasion of host erythrocytes.
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Ekta Saini, Pradeep Kumar Sheokand, Vaibhav Sharma, Prakhar Agrawal, Inderjeet Kaur, Shailja Singh, Asif Mohmmed, and Pawan Malhotra
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Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Abstract
The human malaria parasite, Plasmodium falciparum possesses unique gliding machinery referred to as the glideosome that powers its entry into the insect and vertebrate hosts. Several parasite proteins including Photosensitized INA-labelled protein 1 (PhIL1) have been shown to associate with glideosome machinery. Here we describe a novel PhIL1 associated protein complex that co-exists with the glideosome motor complex in the inner membrane complex of the merozoite. Using an experimental genetics approach, we characterized the role(s) of three proteins associated with PhIL1: a glideosome associated protein- PfGAPM2, an IMC structural protein- PfALV5, and an uncharacterized protein-referred here as PfPhIP (PhIL1 Interacting Protein). Parasites lacking PfPhIP or PfGAPM2 were unable to invade host RBCs. Additionally, the downregulation of PfPhIP resulted in significant defects in merozoite segmentation. Furthermore, the PfPhIP and PfGAPM2 depleted parasites showed abrogation of reorientation/gliding. However, initial attachment with host RBCs was not affected in these parasites. Together, the data presented here show that proteins of the PhIL1-associated complex play an important role in the orientation of P. falciparum merozoites following initial attachment, which is crucial for the formation of a tight junction and hence invasion of host erythrocytes.
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- 2021
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5. Strain-transcending neutralization of malaria parasite by antibodies against Plasmodium falciparum enolase
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Sneha Dutta, Aneesha Tewari, Chinthapalli Balaji, Reena Verma, Anasuya Moitra, Mamta Yadav, Prakhar Agrawal, Dinkar Sahal, and Gotam K. Jarori
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Plasmodium ,Enolase ,Protective epitope ,Monoclonal antibodies ,Growth inhibition ,Merozoites ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Plasmodium enolase is a target for the growth neutralizing antibodies. Interestingly, the three invasive stages i.e. sporozoites, merozoites, and ookinetes express this protein on their cell surface. Polyclonal anti-Plasmodium falciparum enolase (Pfeno) antibodies disrupt traversal of ookinete through mosquito mid-gut wall as well as have inhibitory effect on parasite growth at erythrocytic stage. In a recent study, it was observed that immunization with a unique epitope of parasite enolase (EWGWS) could confer partial protection against mouse malaria. Further validation is needed for the protective potential of this unique epitope in otherwise highly conserved enolase. Methods In order to investigate the efficacy of growth inhibitory potential of the epitope of P falciparum enolase, a monoclonal antibody specific to EWGWS is generated. In vitro parasite growth inhibition assays and passive immunization of Plasmodium yoelii (or Plasmodium berghei) infected mice were used to assess the parasite growth neutralizing activity of the antibody. Results Screening a panel of monoclonal antibodies raised against recombinant Pfeno that were specific to EWGWS resulted in isolation of H12E1. This antibody recognized only EWGWS epitope containing enolases. H12E1 strongly inhibited parasite growth in culture. This inhibition was strain transcending. Passive infusion of this antibody in P. yoelii or P. berghei infected mice showed significant reduction in parasitemia as compared to controls (p
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- 2018
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6. Bilateral coronoid hyperplasia causing limited mouth opening: A report of two cases
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Pooja Jain, Supriya Balchim Gabhale, Sonali Kadam, and Prakhar Agrawal
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coronoid hyperplasia ,diagnosis ,trismus ,Dentistry ,RK1-715 ,Surgery ,RD1-811 - Abstract
Bilateral hyperplasia of the coronoid process of the mandible is an unusual entity which often presents with limited mouth opening. Thorough clinical and radiographic examination can help in the diagnosis and the treatment planning of this condition. This article consists of a case report of two patients. The patient in each case, presented with a reduced mouth opening, and when subjected to further investigations, was diagnosed with bilateral coronoid hyperplasia.
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- 2018
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7. Scene description with context information using dense-LSTM.
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Varsha Singh, Prakhar Agrawal, and Uma Shanker Tiwary
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- 2023
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8. Deep-learning-based data-manipulation attack resilient supervisory backup protection of transmission lines.
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Astha Chawla, Prakhar Agrawal, Bijaya Ketan Panigrahi, and Kolin Paul
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- 2023
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9. Reproducibility as a service.
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Joseph Wonsil, Nichole Boufford, Prakhar Agrawal, Christopher Chen, Tianhang Cui, Akash Sivaram, and Margo I. Seltzer
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- 2023
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10. Denial-of-Service Attacks Pre-Emptive and Detection Framework for Synchrophasor Based Wide Area Protection Applications.
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Astha Chawla, Animesh Singh, Prakhar Agrawal, Bijaya Ketan Panigrahi, Bhavesh R. Bhalja, and Kolin Paul
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- 2022
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11. Safe and Private Forward-trading Platform for Transactive Microgrids.
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Scott Eisele, Taha Eghtesad, Keegan Campanelli, Prakhar Agrawal, Aron Laszka, and Abhishek Dubey
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- 2021
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12. A Scalable Automated Diagnostic Feature Extraction System for EEGs.
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Prakhar Agrawal, Divya Bhargavi, Gokul Krishna G., Xiao Han, Neha Tevathia, Abbie M. Popa, Nicholas Ross, Diane Myung-kyung Woodbridge, Barbie Zimmerman-Bier, and William Bosl
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- 2019
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13. Denial-of-Service Resilient Frameworks for Synchrophasor-Based Wide Area Monitoring Systems.
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Astha Chawla, Prakhar Agrawal, Animesh Singh, Bijaya Ketan Panigrahi, Kolin Paul, and Bhavesh R. Bhalja
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- 2020
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14. Safe and Private Forward-Trading Platform for Transactive Microgrids.
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Scott Eisele, Taha Eghtesad, Keegan Campanelli, Prakhar Agrawal, Aron Laszka, and Abhishek Dubey
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- 2019
15. Identification of new oxospiro chromane quinoline-carboxylate antimalarials that arrest parasite growth at ring stage
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Ehtesham Jameel, Hari Madhav, Prakhar Agrawal, Md. Kausar Raza, Saiema Ahmedi, Abdur Rahman, Nida Shahid, Kashfa Shaheen, Chhaya Haresh Gajra, Ashma Khan, Md. Zubbair Malik, Md. Ali Imam, Md. Kalamuddin, Jitendra Kumar, Dinesh Gupta, Shahid M. Nayeem, Nikhat Manzoor, Asif Mohammad, Pawan Malhotra, and Nasimul Hoda
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Structural Biology ,General Medicine ,Molecular Biology - Abstract
Malaria still threatens half the globe population despite successful Artemisinin-based combination therapy. One of the reasons for our inability to eradicate malaria is the emergence of resistance to current antimalarials. Thus, there is a need to develop new antimalarials targeting Plasmodium proteins. The present study reported the design and synthesis of 4, 6 and 7-substituted quinoline-3-carboxylates 9(a–o) and carboxylic acids 10(a–b) for the inhibition of Plasmodium N-Myristoyltransferases (NMTs) using computational biology tools followed by chemical synthesis and functional analysis. The designed compounds exhibited a glide score of −9.241 to −6.960 kcal/mol for PvNMT and −7.538 kcal/mol for PfNMT model proteins. Development of the synthesized compounds was established via NMR, HRMS and single crystal X-ray diffraction study. The synthesized compounds were evaluated for their in vitro antimalarial efficacy against CQ-sensitive Pf3D7 and CQ-resistant PfINDO lines followed by cell toxicity evaluation. In silico results highlighted the compound ethyl 6-methyl-4-(naphthalen-2-yloxy)quinoline-3-carboxylate (9a) as a promising inhibitor with a glide score of −9.084 kcal/mol for PvNMT and −6.975 kcal/mol for PfNMT with IC50 values of 6.58 µM for Pf3D7 line. Furthermore, compounds 9n and 9o exhibited excellent anti-plasmodial activity (Pf3D7 IC50 = 3.96, 6.71 µM, and PfINDO IC50 = 6.38, 2.8 µM, respectively). The conformational stability of 9a with the active site of the target protein was analyzed through MD simulation and was found concordance with in vitro results. Thus, our study provides scaffolds for the development of potent antimalarials targeting both Plasmodium vivax and Plasmodium falciparum. Communicated by Ramaswamy H. Sarma
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- 2023
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16. YOLO Algorithm Implementation for Real Time Object Detection and Tracking
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Prakhar Agrawal, Garvi Jain, Saumya Shukla, Shivansh Gupta, Deepali Kothari, Rekha Jain, and Neeraj Malviya
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- 2022
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17. Photocatalytic Unsymmetrical Coupling of 2-Substituted Quinolines: Synthesis and Evaluation of the Antiplasmodial Potential of β-Norbenzomorphan Frameworks
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Inder Kumar, Upendra Sharma, Rohit Kumar, Shiv Shankar Gupta, Rakesh Kumar, Prakhar Agrawal, and Dinkar Sahal
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Materials science ,Renewable Energy, Sustainability and the Environment ,General Chemical Engineering ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences ,Coupling (electronics) ,chemistry ,Photocatalysis ,Environmental Chemistry ,Iridium ,0210 nano-technology - Abstract
We herein report unsymmetrical coupling of 2-methylquinolines under the blue LED light conditions using iridium-based photocatalyst. This methodology represents the direct synthetic method for the ...
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- 2020
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18. Isolation, characterization and UPLC-DAD based quantification of antiplasmodial isoquinoline alkaloids from Cissampelos pareira L
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Upendra Sharma, Surekha Kumari, Anmol, Shivani, Prakhar Agrawal, and Dinkar Sahal
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C. pareira L. is a centuries-old traditional medicinal plant utilized to treat various diseases like asthma, diarrhea, fever, heart disorders, snakebite, vomiting, malaria, pneumonia, dog bite, inflammation and abdominal pain. Globally, based on traditional knowledge, different parts of this plant are being used individually or in combination in various forms to manage malaria. However, the scientific investigation for validating the most effective part of this plant against malaria parasite has not been done. Therefore, current study aimed to evaluate in vitro antiplasmodial activity of extracts/fractions (whole plant) and decoctions from different parts (roots, stem, leaves and whole plant) of C. pareira against different strains of Plasmodium falciparum followed by antiplasmodial activity guided isolation and quantification of isoquinoline alkaloids in extracts/fractions and decoctions. All extracts/fractions/decoctions and molecules isolated from active fractions were investigated for antiplasmodial activity. Results showed that the chloroform fraction of whole plant was the most promising with IC50 (µg/mL) of 0.79 (Pf3D7) and 2.26 (PfINDO) followed by root decoction having IC50 (µg/mL) 10.22 (Pf3D7) and 7.7 (PfINDO). Among three isolated molecules, two bisbenzylisoquinoline alkaloids namely curine (2) [IC50 (µM) 1.46 (Pf3D7) and 0.51 (PfINDO)], and O,O-dimethylcurine (1) [IC50 (µM) 0.92 (Pf3D7) and 2.6 (PfINDO)], were found to be the most potent against P. falciparum strains. The antiplasmodial activity of chloroform fraction was further validated by the developed UPLC-DAD method, which showed the highest quantities of curine (2) (~107 mg/g) and O,O-dimethylcurine (1) (~15 mg/g) in this fraction. This study showed that the root decoction was more effective than decoctions of each of the other parts of the plant and whole plant hydroalcoholic extract. Further, for the first time, this study validates the traditional use of C. pareira whole plant to manage malaria, providing further opportunity to explore the tremendous structural and chemical diversity of isoquinoline alkaloids for antimalarial drug development.
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- 2022
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19. Identification and characterization of GAP50 binders with the goal to identify novel antimalarials
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Dinkar Sahal, Prakhar Agrawal, Surekha Kumari, and Upendra Sharma
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parasitic diseases - Abstract
Malaria continues to be a killer disease even in the modern world. Indeed, vaccines and drugs have a lot to learn from the malaria parasite before they can be successful. Here, using a filter for glideosomal anchor protein PfGAP50, we have explored a plethora of small molecules to shortlist eight GAP50 binders with promising antiplasmodial activity (IC50 < 3 µM) that are also highly selective. Of these, Hayatinine, Curine, MMV689758 (Bedaquiline), MMV1634402 (Brilacidin), and MMV688271 with PfINDO IC50 ≤ 1 µM were found to stall merozoite invasion by inhibiting IMC formation besides increasing oxidant levels in trophozoites. Bedaquiline pre-treated and washed healthy RBCs showed prophylactic ability to prevent intraerythrocytic development of malaria parasite. Synergistic activities with ΣFIC values as low as 0.22 (Curine and Artemisinin) or 0.37 (Bedaquiline and Artemisinin) augur well for the development of drug combinations to combat malaria effectively. Interestingly, orally delivered Bedaquiline (50 mg/Kg b. wt.) showed substantial suppression of parasitemia in a mouse model of malaria.
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- 2022
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20. Glideosomal GAP50 binders that inhibit invasion and restrict malaria parasite in vitro and in vivo
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Upendra Sharma, Prakhar Agrawal, Dinkar Sahal, and Surekha Kumari
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In vivo ,parasitic diseases ,medicine ,Parasite hosting ,Biology ,medicine.disease ,Malaria ,In vitro ,Microbiology - Abstract
Malaria continues to be a killer disease even in the modern world. Vaccines and drugs have a lot to learn from the malaria parasite before they can be successful. Here, using a filter for glideosomal anchor protein PfGAP50, we have explored a plethora of small molecules to shortlist eight GAP50 binders with promising antiplasmodial activity (IC50 < 3 µM) that are also highly selective. Of these, Hayatinin, Bedaquiline, MMV688271, Curine, and Brilacidin with PfINDO IC50 ≤ 1 µM were found to stall merozoites invasion by inhibiting IMC formation besides increasing ROS levels in trophozoites. Bedaquiline loaded healthy RBCs showed prophylactic ability to prevent intraerythrocytic development of malaria parasite. Synergistic activities with ΣFIC values as low as 0.22 (Curine and Artemisinin) or 0.37 (Bedaquiline and Artemisinin) augur well for the development of drug combinations to combat malaria effectively. Interestingly, orally delivered Bedaquiline (50 mg/Kg b. wt.) showed substantial suppression of parasitemia in the mouse model of malaria.
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- 2021
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21. Antiplasmodial diterpenoid alkaloid from Aconitum heterophyllum Wall. ex Royle: Isolation, characterization, and UHPLC-DAD based quantification
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null Anmol, Surekha Kumari, Rakesh Kumar, Raman Singh, Gaurav Aggarwal, Prakhar Agrawal, Dinkar Sahal, and Upendra Sharma
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Pharmacology ,Antimalarials ,Inhibitory Concentration 50 ,Aconitum ,Alkaloids ,Plant Extracts ,Drug Discovery ,Plasmodium falciparum ,Chloroquine ,Diterpenes ,Plant Roots ,Chromatography, High Pressure Liquid - Abstract
Aconitum heterophyllum Wall. ex Royle is a traditionally important medicinal plant having numerous therapeutic actions as documented in Ayurveda. This plant is traditionally known for combating worm infestation, fever, respiratory tract disease, vomiting, diarrhoea, diabetes, skin disorders, anaemia, and joint disorders. Further, it has been used alone and in combination with other plants to prepare various anti-malarial formulations. However, there is no report on the assessment of its anti-plasmodial activity, and the metabolite(s) responsible for this activity.The main aim of this study was to conduct phytochemical investigation of A. heterophyllum roots for the preparation of extract, fractions, and isolation of pure molecules to identify active fractions/molecules responsible for the anti-plasmodial activity, and development of UHPLC-DAD based analytical method which can be used for the quantification of marker compounds in the extracts and fractions.Hydroalcoholic extract (1:1 v/v) and fractions (n-hexane, chloroform, ethyl acetate, n-butanol, and water) were prepared from the dried powdered roots of A. heterophyllum. Fractions were further subjected to silica gel column chromatography to isolate pure specialized secondary metabolites from this plant. All extracts, fractions, and pure molecules were evaluated against the chloroquine resistant Pf INDO and chloroquine sensitive Pf3D7 strains in culture for calculating their ICPhytochemical investigation of A. heterophyllum root led to the isolation of six specialized metabolites viz. 2-O-cinnamoyl hetisine (1), atisinium (2), 4-oxabicyclo [3.2.2] nona-1(7),5,8-triene (3), atisinium cinnamate (4), aconitic acid (5), and atisinium formate (6). Compound 1 is a new hetisine type diterpenoid alkaloid, compounds 4 and 6 are new counter ionic forms observed with atisinium ion, and compound 3 is being reported for the first time from this genus. Chloroform fraction was found to be the most active with ICThis study provides the scientific rationale for the traditional use of this plant in treating malaria. Further, this study revealed that the anti-malarial potential of this plant might be due to the presence of diterpenoid alkaloids.
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- 2021
22. Antiplasmodial diterpenoid alkaloid from Aconitum heterophyllum: Isolation, characterization, and UHPLC-DAD based quantification
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Raman Singh, Gaurav Aggarwal, Upendra Sharma, Anmol, Surekha Kumari, Rakesh Kumar, Dinkar Sahal, and Prakhar Agrawal
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chemistry.chemical_compound ,Chloroform ,Chromatography ,Column chromatography ,chemistry ,Phytochemical ,Aconitic acid ,Alkaloid ,Ethyl acetate ,Fraction (chemistry) ,Terpenoid - Abstract
Aconitum heterophyllum is a traditionally important medicinal plant having numerous therapeutic actions as documented in Ayurveda. This plant has been used alone as well as in combination with other plants for the preparation of different anti-malarial formulations. However, there is no report on the assessment of its anti-plasmodial activity, and the compound responsible for this activity. The main aim of this study was to conduct phytochemical investigation of A. heterophyllum roots for the preparation of extract, fractions and isolation of pure molecules to identify active fractions/molecules responsible for the anti-plasmodial activity, and development of UHPLC-DAD based analytical method which can be used for the quantification of marker compounds in the extracts and fractions. Hydro-alcoholic extract (1:1 v/v) and fractions (n-hexane, chloroform, ethyl acetate, n-butanol and water) were prepared from the dried powdered roots of A. heterophyllum. Fractions were further subjected to silica gel-based column chromatography to isolate pure specialized secondary metabolites from this plant. All extracts, fractions and pure molecules were evaluated against the chloroquine resistant Pf INDO and chloroquine sensitive Pf3D7 strains in culture for calculating their IC50 values. UHPLC-DAD based analytical method was also developed for the first time for the quantification and quality assessment of this commercially important Himalayan medicinal plant. Phytochemical investigation of A. heterophyllum root led to the isolation of six specialized metabolites named as 2-O-cinnamoyl hetisine (1), atisinium (2), 4-oxabicyclo [3.2.2] nona-1(7),5,8-triene (3), atisinium cinnamate (4), aconitic acid (5), and atisinium formate (6). Compound 1 is a new hetisine type diterpenoid alkaloid, compounds 4 and 6 are new counter ionic forms observed with atisinium ion, and compound 3 is being reported for the first time from this genus. Chloroform fraction was found to be the most active with IC50 (µg/mL) 1.01 (Pf INDO) and 1.32 (Pf3D7). The isolated molecule 2-O-cinnamoyl hetisine (1), a new diterpenoid alkaloid isolated from chloroform fraction, showed promising antiplasmodial activities with IC50 (µM) 1.92 (Pf INDO) and 10.8 (Pf 3D7). Activity of chloroform fraction was further validated by the developed UHPLC-DAD based method as the quantity of 2-O-cinnamoyl hetisine (1) was higher in the chloroform fraction (≅200 µg/mL) than in all other fractions (< 7µg/mL). Atisinium (2) and 2-O-cinnamoyl hetisine (1) were found to be the main marker compounds of this plant based on quantity and antiplasmodial activity, respectively. This study provides the scientific rational for the traditional use of this plant in treating malaria. Further, this study revealed that anti-malarial potential of this plant might be due to the presence of diterpenoid alkaloids.
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- 2021
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23. Plasmodium falciparum PhIL1-associated complex plays an essential role in merozoite reorientation and invasion of host erythrocytes
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Pawan Malhotra, Pradeep Kumar Sheokand, Shailja Singh, Asif Mohmmed, Prakhar Agrawal, Vaibhav Sharma, Ekta Saini, Inderjeet Kaur, Saini, Ekta [0000-0001-5701-6108], Sheokand, Pradeep Kumar [0000-0002-0846-3398], Sharma, Vaibhav [0000-0003-2133-3704], Agrawal, Prakhar [0000-0003-3641-4814], Singh, Shailja [0000-0001-5286-6605], Mohmmed, Asif [0000-0002-0239-1979], Malhotra, Pawan [0000-0002-7384-6280], and Apollo - University of Cambridge Repository
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Plasmodium ,Erythrocytes ,Cell Membranes ,Protozoan Proteins ,Biochemistry ,Medical Conditions ,Animal Cells ,Red Blood Cells ,Medicine and Health Sciences ,Parasite hosting ,Malaria, Falciparum ,Biology (General) ,0303 health sciences ,biology ,Tight junction ,030302 biochemistry & molecular biology ,Cell biology ,Cellular Structures and Organelles ,Cellular Types ,Research Article ,QH301-705.5 ,Immunology ,Motor Proteins ,Microbiology ,Motor protein ,03 medical and health sciences ,Downregulation and upregulation ,Molecular Motors ,Virology ,Parasite Groups ,Genetics ,Parasitic Diseases ,Humans ,Molecular Biology ,030304 developmental biology ,Inner membrane complex ,Blood Cells ,Merozoites ,Biology and Life Sciences ,Membrane Proteins ,Proteins ,Plasmodium falciparum ,Cell Biology ,RC581-607 ,biology.organism_classification ,Membrane protein ,Parasitology ,Immunologic diseases. Allergy ,Apicomplexa - Abstract
The human malaria parasite, Plasmodium falciparum possesses unique gliding machinery referred to as the glideosome that powers its entry into the insect and vertebrate hosts. Several parasite proteins including Photosensitized INA-labelled protein 1 (PhIL1) have been shown to associate with glideosome machinery. Here we describe a novel PhIL1 associated protein complex that co-exists with the glideosome motor complex in the inner membrane complex of the merozoite. Using an experimental genetics approach, we characterized the role(s) of three proteins associated with PhIL1: a glideosome associated protein- PfGAPM2, an IMC structural protein- PfALV5, and an uncharacterized protein—referred here as PfPhIP (PhIL1 Interacting Protein). Parasites lacking PfPhIP or PfGAPM2 were unable to invade host RBCs. Additionally, the downregulation of PfPhIP resulted in significant defects in merozoite segmentation. Furthermore, the PfPhIP and PfGAPM2 depleted parasites showed abrogation of reorientation/gliding. However, initial attachment with host RBCs was not affected in these parasites. Together, the data presented here show that proteins of the PhIL1-associated complex play an important role in the orientation of P. falciparum merozoites following initial attachment, which is crucial for the formation of a tight junction and hence invasion of host erythrocytes., Author summary Invasion of Plasmodium merozoites into RBCs is a multistep process that involves initial attachment of merozoites to the RBC surface, their reorientation, and subsequent gliding into RBCs using glideosome machinery. The glideosome machinery lies between the plasma membrane and inner membrane complex (IMC) and consists of MyoA, its interacting protein; MTIP, gliding associated proteins (GAPs), and a Photosensitized INA labeled protein (PhIL1)-associated protein complex. Here, we demonstrate that the deletion of any of two components of the PhIL1-associated complex, PfPhIP or PfGAPM2, aborts merozoite reorientation and blocks their invasion into RBCs. The study thus provides new molecular and mechanistic insights into merozoite invasion of RBCs.
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- 2021
24. Novel halogenated arylvinyl-1,2,4 trioxanes as potent antiplasmodial as well as anticancer agents: Synthesis, bioevaluation, structure-activity relationship and in-silico studies
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Vincent Kam Wai Wong, Dharmendra Kumar Yadav, Mohit K. Tiwari, Dinkar Sahal, Sandeep Chaudhary, Qiu Congling, Paolo Coghi, Prakhar Agrawal, and Li Jun Yang
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Halogenation ,Stereochemistry ,Cell Survival ,In silico ,Cell ,Fluorescence assay ,Plasmodium falciparum ,Artesunate ,Antineoplastic Agents ,Parasitemia ,Antimalarials ,Mice ,Structure-Activity Relationship ,Heterocyclic Compounds ,Drug Discovery ,medicine ,Structure–activity relationship ,Animals ,Humans ,Pharmacology ,Life Cycle Stages ,Mice, Inbred BALB C ,Binding Sites ,biology ,Chemistry ,Organic Chemistry ,General Medicine ,biology.organism_classification ,ErbB Receptors ,Molecular Docking Simulation ,Disease Models, Animal ,medicine.anatomical_structure ,HEK293 Cells ,Virtual interaction ,Drug Screening Assays, Antitumor - Abstract
Herein, we have synthesized a series of lipophilic, halogenated-arylvinyl-1,2,4-trioxanes 8a–g (28 compounds) and assessed for their in vitro anti-plasmodial activity in Plasmodium falciparum culture using SYBRgreen-I fluorescence assay against chloroquine-resistant Pf INDO and artemisinin-resistant Pf Cam 3.1R539T (MRA-1240) strains. Alongside, the cell cytotoxic potential of 8a–g has also been determined against the HEK293 cell line in vitro. Out of twenty-eight halogenated-arylvinyl-1,2,4-trioxanes; ten analogues (8a2, 8a4, 8b2, 8b4, 8d4, 8e1, 8e2, 8e4, 8f2, and 8g4) have shown potent in vitro antiplasmodial activity with IC50 1M17 ) have demonstrated the strong virtual interaction.
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- 2021
25. Unravelling a PhIL1-glideosome associated complex in Plasmodium falciparum merozoite that is essential for invasion in host erythrocytes
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Pradeep Kumar Sheokand, Asif Mohmmed, Pawan Malhotra, Prakhar Agrawal, Shailja Singh, Ekta Saini, Inderjeet Kaur, and Vaibhav Sharma
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Host (biology) ,Plasmodium falciparum merozoite ,Biology ,Microbiology - Abstract
The human malaria parasite, Plasmodium falciparum possess a unique mechanism of gliding motility guided by glideosome that powers its entry into insect and vertebrate hosts to facilitate its invasion and internalization within the targeted host cell. Photosensitized INA-labelled protein 1 (PhIL1) forms a novel protein complex that is associated with glideosome motor complex in the inner membrane complex of invasive merozoite. To establish the role of PfPhIL1 associated novel complex at asexual blood stages, we characterized three proteins associated with PhIL1: a glideosome associated protein- PfGAPM2, an IMC structural protein- PfALV5 and a previously uncharacterised protein - referred here as PfPhIP (PhIL1 interacting protein). GFP targeting and co-immunoprecipitation analysis confirmed that these proteins are part of a PhIL1 associated novel complex, which co-exists with the glideosomal complex. To know the functional significance of PhIL1 associated complex, transgenic parasites were generated for glmS mediated conditional knock-down of each of the three proteins. Parasites lacking PfPhIP or PfGAPM2 were unable to invade the RBCs. PfPhIP deficient parasites also showed defects in merozoite segmentation. PfPhIP and PfGAPM2 depleted parasites revealed abrogation of reorientation/gliding, although initial attachment with human RBCs was not affected in these knock-down parasites. Together, the data presented here shows that proteins of the PhIL1 associated complex play an important role in orientation of P. falciparum merozoites post initial attachment, which is crucial for formation of tight junction and hence invasion of host erythrocytes.
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- 2020
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26. A Survey of Different Steganography Technique using Cryptographic Algorithm
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Prakhar Agrawal and Arvind Upadhyay
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Theoretical computer science ,Steganography ,Computer science ,business.industry ,Cryptography ,Data_CODINGANDINFORMATIONTHEORY ,business - Abstract
Steganography and cryptography are two major aspects of data security . In this paper we are going to provide the survey of different techniques of LSB based Steganography that used cryptography algorithms to secure sensitive information. Steganography is used to hide data and Cryptography is used to encrypt the data. Although cryptography and steganography individually can provide data security, every of them has a drawback. Drawback associated with Cryptography is that, the cipher text looks meaningless, so the unintended user can interrupt the transmission or make more careful checks on the information from the sender to the receiver. Drawback associated with Steganography is that when the presence of hidden information is revealed or even suspected, the message is become known[1].By combining these two methods we can solve both of the above problem. First we encrypt the data using any cryptography technique and then embed the encrypted text into the image. Steganography is the process which hides the presence of secure data during communication. On the other hand cryptography is encrypting and decrypting of secure data and information with a secrete key so that no one can be understand the message directly.
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- 2018
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27. An Implementation of Text and Color Image Steganography Technique Using Cryptographic Algorithm
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Arvind Upadhyay and Prakhar Agrawal
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Cover (telecommunications) ,Steganography ,Computer science ,Color image ,business.industry ,Image quality ,Information hiding ,Data integrity ,Data security ,Cryptography ,business ,Algorithm - Abstract
The craft of data stowing away has gotten much consideration in the ongoing years as security of data has turned into a major worry in this web time. As sharing of delicate data by means of a typical correspondence channel have become inevitable, Steganography techniques aimed at secretly hiding data in a multimedia carrier such as text, audio, image or video, without raising any suspicion of alteration to its contents. The original carrier is referred to as the cover object. In this paper, we proposed a mechanism of end user data security by means of image steganography technique using ECDH (Elliptic Curve Diffie–Hellman) algorithm for improving image quality while we hide data in image. Our proposed approach is simplified yet efficient algorithm that can be implemented for end user application that strictly enforces the data integrity over the communication channel. The performance of the proposed approach is measured in terms of time, memory, MSE and PSNR which was better improved from the previous approach in the similar parameters.
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- 2018
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28. Bilateral coronoid hyperplasia causing limited mouth opening: A report of two cases
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Sonali Kadam, Prakhar Agrawal, Supriya Balchim Gabhale, and Pooja N Jain
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Reduced mouth opening ,Orthodontics ,business.industry ,diagnosis ,Bilateral hyperplasia ,coronoid hyperplasia ,lcsh:Surgery ,lcsh:RD1-811 ,Hyperplasia ,Trismus ,medicine.disease ,Limited mouth opening ,trismus ,lcsh:RK1-715 ,medicine.anatomical_structure ,lcsh:Dentistry ,medicine ,Coronoid process of the mandible ,medicine.symptom ,business - Abstract
Bilateral hyperplasia of the coronoid process of the mandible is an unusual entity which often presents with limited mouth opening. Thorough clinical and radiographic examination can help in the diagnosis and the treatment planning of this condition. This article consists of a case report of two patients. The patient in each case, presented with a reduced mouth opening, and when subjected to further investigations, was diagnosed with bilateral coronoid hyperplasia.
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- 2018
29. Design, Synthesis, Structure-Activity Relationship and Docking Studies of Novel Functionalized Arylvinyl-1,2,4-Trioxanes as Potent Antiplasmodial as well as Anticancer Agents
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Paolo Coghi, Mohit K. Tiwari, Lalit Yadav, Vincent Kam Wai Wong, Dharmendra Kumar Yadav, Richa Sharma, Yuzhong Peng, Li Jun Yang, Dinkar Sahal, Sandeep Chaudhary, Bharti Rajesh Kumar Shyamlal, and Prakhar Agrawal
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Stereochemistry ,Cell Survival ,Plasmodium falciparum ,Antineoplastic Agents ,01 natural sciences ,Biochemistry ,Antimalarials ,Structure-Activity Relationship ,Parasitic Sensitivity Tests ,Heterocyclic Compounds ,Drug Discovery ,Dihydrofolate reductase ,medicine ,Structure–activity relationship ,Humans ,General Pharmacology, Toxicology and Pharmaceutics ,Artemisinin ,Cytotoxicity ,IC50 ,Cell Proliferation ,Pharmacology ,biology ,Dose-Response Relationship, Drug ,Molecular Structure ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,biology.organism_classification ,In vitro ,0104 chemical sciences ,Molecular Docking Simulation ,010404 medicinal & biomolecular chemistry ,HEK293 Cells ,Docking (molecular) ,Drug Design ,biology.protein ,Molecular Medicine ,Drug Screening Assays, Antitumor ,medicine.drug - Abstract
A novel series of synthetic functionalized arylvinyl-1,2,4-trioxanes (8 a-p) has been prepared and assessed for their in vitro antiplasmodial activity against the chloroquine-resistant Pf INDO strain of Plasmodium falciparum by using a SYBR green-I fluorescence assay. Compounds 8 g (IC50 =0.051 μM; SI=589.41) and 8 m (IC50 =0.059 μM; SI=55.93) showed 11-fold and >9-fold more potent antiplasmodial activity, respectively, as compared to chloroquine (IC50 =0.546 μM; SI=36.63). Different in silico docking studies performed on many target proteins revealed that the most active arylvinyl-1,2,4-trioxanes (8 g and 8 m) showed dihydrofolate reductase (DHFR) binding affinities on a par with those of chloroquine and artesunate. The in vitro cytotoxic potentials of 8 a-p were also evaluated against human lung (A549) and liver (HepG2) cancer cell lines along with immortalized normal lung (BEAS-2B) and liver (LO2) cell lines. Following screening, five derivatives viz. 8 a, 8 h, 8 l, 8 m and 8 o (IC50 =1.65-31.7 μM; SI=1.08-10.96) were found to show potent cytotoxic activity against (A549) lung cancer cell lines, with selectivity superior to that of the reference compounds artemisinin (IC50 =100 μM), chloroquine (IC50 =100 μM) and artesunic acid (IC50 =9.85 μM; SI=0.76). In fact, the most active 4-naphthyl-substituted analogue 8 l (IC50 =1.65 μM; SI >10) exhibited >60 times more cytotoxicity than the standard reference, artemisinin, against A549 lung cancer cell lines. In silico docking studies of the most active anticancer compounds, 8 l and 8 m, against EGFR were found to validate the wet lab results. In summary, a new series of functionalized aryl-vinyl-1,2,4-trioxanes (8 a-p) has been shown to display dual potency as promising antiplasmodial and anticancer agents.
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- 2020
30. Antifungal effects of tulsi, garlic, cinnamon and lemongrass in powder and oil form on Candida albicans: An in vitro study
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Shreya Thakkar, Amena Ranginwala, Dhruval Acharya, Prakhar Agrawal, Mitul Prajapati, and Monali Shah
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Antifungal ,biology ,medicine.drug_class ,Inoculation ,Chemistry ,plant preparations ,biology.organism_classification ,Corpus albicans ,Pathology and Forensic Medicine ,Otorhinolaryngology ,Candida albicans ,medicine ,Original Article ,Food science ,Agar diffusion test ,Plant Preparations ,Medicinal plants ,General Dentistry ,Cinnamon Oil ,medicinal plants - Abstract
Introduction: The use of plants for treating diseases is as old as the human species. Medicinal plants have been a major source of therapeutic agents for alleviation and cure of diseases. Objectives: The objective of the study was to evaluate and compare the antifungal activity of garlic, cinnamon, lemongrass and tulsi in powder and oil form at different concentrations on Candida albicans. Materials and Methods: Powder and oil of garlic, cinnamon, lemongrass and Tulsi dissolved in inert solvent dimethyl formamide to obtain different concentration. Stock solution of different concentration was inoculated on Petri plates containing C. albicans and incubated at 30°C for 48 h. The inhibition zones were measured in millimeters using Vernier caliper. The collected data were analyzed using statistical test like mean value and one-way analysis of variance. Results: Maximum zone of inhibition for the C. albicans was 42 mm at concentrations of 50% for the oil of lemongrass; followed by cinnamon 40 mm, garlic 24 mm and tulsi 20 mm. The P value obtained 0.050, 0.040, 0.036 and 0.031 were found to be statically significant for C. albicans at 20%, 30%, 40% and 50% concentrations of the various oil preparations, respectively. The P value obtained 0.043, 0.033, 0.032 and 0.027 were found to be statically significant for C. albicans at 20%, 30%, 40% and 50% concentrations of various plant powder, respectively. Conclusions: Lemongrass and cinnamon oil shows best antifungal effect against C. albicans as compared to garlic and tulsi. Compared to powder preparations, the oil preparations are better to inhibit the growth and higher the concentrations, greater the zone of inhibition seen in all the plant extracts and in oil.
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- 2021
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31. Safe and Private Forward-Trading Platform for Transactive Microgrids
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Prakhar Agrawal, Abhishek Dubey, Taha Eghtesad, Keegan Campanelli, Aron Laszka, and Scott Eisele
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Signal Processing (eess.SP) ,FOS: Computer and information sciences ,Computer Science - Cryptography and Security ,Control and Optimization ,Smart contract ,Computer Networks and Communications ,Computer science ,Systems and Control (eess.SY) ,Electrical Engineering and Systems Science - Systems and Control ,Computer Science - Computers and Society ,Artificial Intelligence ,Transactive memory ,Computers and Society (cs.CY) ,FOS: Electrical engineering, electronic engineering, information engineering ,Computer Science - Multiagent Systems ,Electrical Engineering and Systems Science - Signal Processing ,Resilience (network) ,Flexibility (engineering) ,business.industry ,Cyber-physical system ,Decentralised system ,Human-Computer Interaction ,Smart grid ,Computer Science - Distributed, Parallel, and Cluster Computing ,Risk analysis (engineering) ,Hardware and Architecture ,Distributed generation ,Distributed, Parallel, and Cluster Computing (cs.DC) ,business ,Cryptography and Security (cs.CR) ,Multiagent Systems (cs.MA) - Abstract
Power grids are evolving at an unprecedented pace due to the rapid growth of distributed energy resources (DER) in communities. These resources are very different from traditional power sources, as they are located closer to loads and thus can significantly reduce transmission losses and carbon emissions. However, their intermittent and variable nature often results in spikes in the overall demand on distribution system operators (DSO). To manage these challenges, there has been a surge of interest in building decentralized control schemes, where a pool of DERs combined with energy storage devices can exchange energy locally to smooth fluctuations in net demand. Building a decentralized market for transactive microgrids is challenging, because even though a decentralized system provides resilience, it also must satisfy requirements such as privacy, efficiency, safety, and security, which are often in conflict with each other. As such, existing implementations of decentralized markets often focus on resilience and safety but compromise on privacy. In this article, we describe our platform, called TRANSAX, which enables participants to trade in an energy futures market, which improves efficiency by finding feasible matches for energy trades, enabling DSOs to plan their energy needs better. TRANSAX provides privacy to participants by anonymizing their trading activity using a distributed mixing service, while also enforcing constraints that limit trading activity based on safety requirements, such as keeping planned energy flow below line capacity. We show that TRANSAX can satisfy the seemingly conflicting requirements of efficiency, safety, and privacy. We also provide an analysis of how much trading efficiency is lost. Trading efficiency is improved through the problem formulation, which accounts for temporal flexibility, and system efficiency is improved using a hybrid-solver architecture. Finally, we describe a testbed to run experiments and demonstrate its performance using simulation results.
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- 2019
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32. MOESM2 of Strain-transcending neutralization of malaria parasite by antibodies against Plasmodium falciparum enolase
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Dutta, Sneha, Aneesha Tewari, Chinthapalli Balaji, Verma, Reena, Anasuya Moitra, Yadav, Mamta, Prakhar Agrawal, Dinkar Sahal, and Gotam Jarori
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fungi ,parasitic diseases - Abstract
Additional file 2. Quantitation of un-ruptured schizonts in anti-rPfeno antibody treated cultures at 48 h post antibody addition. Control samples had no schizonts. Data are expressed as percent of total Schizonts present at 24 h post antibody addition (see Fig. 3).
- Published
- 2018
- Full Text
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