1. Structure and mechanism of the K + /H + exchanger KefC.
- Author
-
Gulati A, Kokane S, Perez-Boerema A, Alleva C, Meier PF, Matsuoka R, and Drew D
- Subjects
- Glutathione metabolism, Molecular Dynamics Simulation, Potassium-Hydrogen Antiporters metabolism, Potassium-Hydrogen Antiporters chemistry, Potassium-Hydrogen Antiporters genetics, Protein Domains, Cryoelectron Microscopy, Escherichia coli metabolism, Escherichia coli genetics, Escherichia coli Proteins metabolism, Escherichia coli Proteins chemistry, Escherichia coli Proteins genetics, Potassium metabolism
- Abstract
Intracellular potassium (K
+ ) homeostasis is fundamental to cell viability. In addition to channels, K+ levels are maintained by various ion transporters. One major family is the proton-driven K+ efflux transporters, which in gram-negative bacteria is important for detoxification and in plants is critical for efficient photosynthesis and growth. Despite their importance, the structure and molecular basis for K+ -selectivity is poorly understood. Here, we report ~3.1 Å resolution cryo-EM structures of the Escherichia coli glutathione (GSH)-gated K+ efflux transporter KefC in complex with AMP, AMP/GSH and an ion-binding variant. KefC forms a homodimer similar to the inward-facing conformation of Na+ /H+ antiporter NapA. By structural assignment of a coordinated K+ ion, MD simulations, and SSM-based electrophysiology, we demonstrate how ion-binding in KefC is adapted for binding a dehydrated K+ ion. KefC harbors C-terminal regulator of K+ conductance (RCK) domains, as present in some bacterial K+ -ion channels. The domain-swapped helices in the RCK domains bind AMP and GSH and they inhibit transport by directly interacting with the ion-transporter module. Taken together, we propose that KefC is activated by detachment of the RCK domains and that ion selectivity exploits the biophysical properties likewise adapted by K+ -ion-channels., (© 2024. The Author(s).)- Published
- 2024
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