15 results on '"Pokholenko O"'
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2. Conversions of 2-(2-Oxo Cyclohexylcarbonyl)Benzoic Acid Derivatives to Pyrazolo[, , , , , , , , , , ]Isoindole and Pyrimidine Rings
- Author
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Wolf, J. G., primary, Voitenko, Z. V., additional, Pokholenko, O. A., additional, Kondratov, I. S., additional, Kovtunenko, V. O., additional, and André, C., additional
- Published
- 2005
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3. Conversions of 2-(2-Oxo CyclohexylcarbonyOBenzoic Acid Derivatives to Pyrazolo[5,1-a]lsoindole and Pyrimidine Rings.
- Author
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Voitenko, Z. V., Pokholenko, O. A., Kondratov, I. S., Kovtunenko, V. O., André, C., and Wolf, J. G.
- Subjects
- *
PYRAZOLONES , *KETONES , *PYRIMIDINES , *OXO compounds , *ORGANIC compounds - Abstract
Phtalic acid derivative of o-methylcarboxybenzoylchioride readily acylates N(1-cyclohexenyl) morpholine and is likely to acylate other enamines along the classic path to 1,3-diketones. It is a convenient route towards o-(1,3-diketone)) derivatives of benzoic acid, which are, precursors of o-(heteroaryl)-benzoic acids. Further conversions with hydrazines and amidines lead to pyrazolo[5.1-a]isoindole and pyrimidine rings respectively. The structures of the obtained compounds were con. firmed by X-ray structure determinations. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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4. Synthetic Amine Linkers for Efficient Sortagging.
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Bondarchuk T, Vaskiv D, Zhuravel E, Shyshlyk O, Hrynyshyn Y, Nedialko O, Pokholenko O, Pohribna A, Kuchuk O, Brovarets V, and Zozulya S
- Subjects
- Biotinylation, Substrate Specificity, Single-Domain Antibodies chemistry, Mass Spectrometry, Aminoacyltransferases metabolism, Amines chemistry, Staphylococcus aureus enzymology, Cysteine Endopeptidases metabolism, Cysteine Endopeptidases chemistry, Bacterial Proteins chemistry
- Abstract
Enzymatic site-specific bioconjugation techniques, in particular sortase-mediated ligation, are increasingly used to generate conjugated proteins for a wide array of applications. Extension of the utility and practicality of sortagging for diverse purposes is critically dependent on further improvement of the efficiency of sortagging reactions with a wider structural variety of substrates. We present a comprehensive comparative mass spectrometry screening study of synthetic nonpeptidic incoming amine nucleophile substrates of Staphylococcus aureus Sortase A enzyme. We have identified the optimal structural motifs among the chemically diverse set of 452 model primary and secondary amine-containing sortagging substrates, and we demonstrate the utility of representative amine linkers for efficient C-terminal biotinylation of nanobodies.
- Published
- 2024
- Full Text
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5. CaproGlu: Multifunctional tissue adhesive platform.
- Author
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Djordjevic I, Pokholenko O, Shah AH, Wicaksono G, Blancafort L, Hanna JV, Page SJ, Nanda HS, Ong CB, Chung SR, Chin AYH, McGrouther D, Choudhury MM, Li F, Teo JS, Lee LS, and Steele TWJ
- Subjects
- Adhesiveness, Animals, Biocompatible Materials, Diazomethane, Humans, Viscosity, Tissue Adhesives
- Abstract
Driven by the clinical need for a strong tissue adhesive with elastomeric material properties, a departure from legacy crosslinking chemistries was sought as a multipurpose platform for tissue mending. A fresh approach to bonding wet substrates has yielded a synthetic biomaterial that overcomes the drawbacks of free-radical and nature-inspired bioadhesives. A food-grade liquid polycaprolactone grafted with carbene precursors yields CaproGlu. The first-of-its-kind low-viscosity prepolymer is VOC-free and requires no photoinitiators. Grafted diazirine end-groups form carbene diradicals upon low energy UVA (365 nm) activation that immediately crosslink tissue surfaces; no pre-heating or animal-derived components are required. The hydrophobic polymeric environment enables metastable functional groups not possible in formulations requiring solvents or water. Activated diazirine within CaproGlu is uniquely capable of crosslinking all amino acids, even on wet tissue substrates. CaproGlu undergoes rapid liquid-to-biorubber transition within seconds of UVA exposure-features not found in any other bioadhesive. The exceptional shelf stability of CaproGlu allows gamma sterilization with no change in material properties. CaproGlu wet adhesiveness is challenged against current unmet clinical needs: anastomosis of spliced blood vessels, anesthetic muscle patches, and human platelet-mediating coatings. The versatility of CaproGlu enables both organic and inorganic composites for future bioadhesive platforms., (Copyright © 2020 The Author(s). Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2020
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- View/download PDF
6. Self curing and voltage activated catechol adhesives.
- Author
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Gan L, Tan NCS, Gupta A, Singh M, Pokholenko O, Ghosh A, Zhang Z, Li S, and Steele TWJ
- Abstract
Catechol adhesives are limited to two-part curing designs. For the first time, a one-pot catechol adhesive is demonstrated with multiple modes of external activation: self-curing, electrocuring, substrate, and two-part curing. Lap shear adhesion (50 kPa) and viscoelastic properties demonstrate that electrocuring is non-inferior to two-part curing methods.
- Published
- 2019
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7. Design and optimisation of Photochrome Aptamer Switch Assay (PHASA).
- Author
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Zhou Y, Wu Y, Pokholenko O, Papper V, Marks RS, and Steele TWJ
- Subjects
- Aptamers, Nucleotide chemical synthesis, Fluorescent Dyes chemical synthesis, Aptamers, Nucleotide chemistry, Biosensing Techniques, Fluorescent Dyes chemistry, Stilbenes analysis
- Abstract
Photochrome Aptamer Switch Assay (PHASA) is our unique and recently developed fluorescent biosensing platform that exploits the combination of aptamer adaptive binding and photoisomerisation kinetics of stilbenes. The PHASA is based on converting any suitable stilbene-ligand-aptamer complex into a reversible biosensor. Binding affinity, aptamer concentration, and stilbene molecular structure determine the PHASA performance criteria. Consequently, understanding of the structure-activity relationship of the stilbene-ligand conjugate is extremely important when predicting and optimising the biosensor sensitivity. In the present manuscript, new analytical methods relating to calculation of the limit of detection (LOD) of the PHASA are proposed and discussed. Using these methods, it is possible to optimise the independent or dependent physicochemical parameters of the stilbene-ligand conjugates and evaluate their general sensing performance. The proposed analytical methods are based on the inter-dependent relationships between the sensitivity and the range of analyte detection and provide starting conditions for known aptamer binding constants in various PHASA applications., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
8. Non-aqueous, tissue compliant carbene-crosslinking bioadhesives.
- Author
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Shah AH, Pokholenko O, Nanda HS, and Steele TWJ
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- Animals, Humans, Methane chemistry, Platelet Activation, Platelet-Rich Plasma chemistry, Polyamines, Polyethylene Glycols chemistry, Porosity, Stress, Mechanical, Swine, Ultraviolet Rays, Viscosity, Adhesives chemistry, Biocompatible Materials chemistry, Cross-Linking Reagents chemistry, Methane analogs & derivatives
- Abstract
Surgical adhesives are an attractive alternative to traditional mechanical tissue fixation methods of sutures and staples. Ease of application, biocompatibility, enhanced functionality (drug delivery) are known advantages but weak adhesion strength in the wet environment and lack of tissue compliant behavior still pose a challenge. In order to address these issues, non-aqueous bioadhesive based on blends of polyamidoamine (PAMAM) dendrimer, conjugated with 4-[3-(trifluoromethyl)-3H-diazirin-3-yl] benzyl bromide (PAMAM-g-diazirine) and liquid polyethylene glycol (PEG 400) has been developed. PEG 400 biocompatible solvent reduces the viscosity of PAMAM-g-diazirine dendrimer without incorporating aqueous solvents or plasticizers, allowing application by syringe or spray. Upon UV activation, diazirine-generated reactive intermediates lead to intermolecular dendrimer crosslinking. The properties of the crosslinked matrix are tissue compliant, with anisotropic material properties dependent on the PEG 400 wt%, UV dose, pressure and uncured adhesive thickness. The hygroscopic PAMAM-g-diazirine/PEG 400 blend was hypothesized to absorb water at the tissue interface, leading to high interfacial adhesion, however porous matrices led to cohesive failure. The hydrophilic nature of the polyether backbone (PEG 400) shielded cationic PAMAM dendrimers with cured bioadhesive film displaying significantly less platelet activation than neat PAMAM-g-diazirine or PLGA thin films., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
- Full Text
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9. Nonthrombogenic Hydrogel Coatings with Carbene-Cross-Linking Bioadhesives.
- Author
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Nanda HS, Shah AH, Wicaksono G, Pokholenko O, Gao F, Djordjevic I, and Steele TWJ
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- Adhesives pharmacology, Cross-Linking Reagents chemistry, Diazomethane chemistry, Fibrinolytic Agents pharmacology, Humans, Hydrogels pharmacology, Methane analogs & derivatives, Methane chemistry, Polyamines chemistry, Adhesives chemistry, Blood Platelets drug effects, Cell Adhesion drug effects, Fibrinolytic Agents chemistry, Hydrogels chemistry
- Abstract
Bioadhesives are a current unmet clinical need for mending of blood contacting soft tissues without inducing thrombosis. Recent development of carbene precursor bioadhesives with the advantages of on-demand curing, tuneable modulus, and wet adhesion have been synthesized by grafting diazirine onto poly (amidoamine) (PAMAM-G5) dendrimers. Herein, the structure activity relationships of platelet adhesion and activation is evaluated for the first time on the cured PAMAM-g-diazirine bioadhesives. Three strategies were employed to prevent healthy human donor platelets from adhering and activating on light-cured bioadhesive surfaces: (1) Attenuation of cationic surface charge, (2) antifouling composites by incorporating heparin and alginate in uncured formulation, and (3) heparin wash of cured bioadhesive surface. Topographical imaging of cured and ethanol dehydrated bioadhesive surfaces was used to quantify the adhered and activated platelets with scanning electron microscopy, whose resolution allowed identification of round senescent, short dendritic, and long dendritic platelets. Cured surfaces of PAMAM-g-diazirine (15%) had 10300 ± 500 adhered platelets mm
-2 with 99.7% activation into short/long dendritic cells. Reduction of primary amines by higher degree of diazirine grafting or capping of free amines by acetylation reduces platelet adherence (2400 ± 200 vs 3000 ± 300, respectively). Physical incorporation of heparin and alginate in the formulations reduced the activated platelet; 1300 ± 300 and 300 ± 50, activated platelets mm-2 , in comparison with additive free adhesive formulation. Similarly, heparin rinse of the surface of additive free bioadhesive reduced the activated platelet to platelets of heparin composites at 600 ± 100 platelets mm-2 . PAMAM-g-diazirine (15%) bioadhesive retained the photocured mechanical properties and lap shear adhesion despite the addition of heparin and alginate additives.- Published
- 2018
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10. On-Demand Bioadhesive Dendrimers with Reduced Cytotoxicity.
- Author
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Gao F, Djordjevic I, Pokholenko O, Zhang H, Zhang J, and Steele TWJ
- Subjects
- Cross-Linking Reagents chemistry, Dendrimers chemistry, Diazomethane chemistry, Membranes, Artificial, Tissue Adhesives chemical synthesis, Tissue Adhesives chemistry, Ultraviolet Rays
- Abstract
Tissue adhesives based on polyamidoamine (PAMAM) dendrimer, grafted with UV-sensitive aryldiazirine (PAMAM-g-diazirine) are promising new candidates for light active adhesion on soft tissues. Diazirine carbene precursors form interfacial and intermolecular covalent crosslinks with tissues after UV light activation that requires no premixing or inclusion of free radical initiators. However, primary amines on the PAMAM dendrimer surface present a potential risk due to their cytotoxic and immunological effects. PAMAM-g-diazirine formulations with cationic pendant amines converted into neutral amide groups were evaluated. In vitro toxicity is reduced by an order of magnitude upon amine capping while retaining bioadhesive properties. The in vivo immunological response to PAMAM-g-diazirine formulations was found to be optimal in comparison to standard poly(lactic- co -glycolic acid) (PLGA) thin films., Competing Interests: The authors declare no conflict of interest.
- Published
- 2018
- Full Text
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11. Addressing Unmet Clinical Needs with UV Bioadhesives.
- Author
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O'Rorke RD, Pokholenko O, Gao F, Cheng T, Shah A, Mogal V, and Steele TW
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- Animals, Biocompatible Materials chemistry, Disease Models, Animal, Humans, Polymers chemistry, Wound Healing, Tissue Adhesives chemistry, Tissue Adhesives radiation effects, Ultraviolet Rays
- Abstract
The invasive practice of suturing for wound closure has persisted for millennia; with the rate of medical development, it is staggering that there are few viable alternatives to invasive mechanical fasteners. Biocompatible and biodegradable polymers are attractive candidates for versatile bioadhesives and could revolutionize surgical procedures. Bioadhesives can be broadly placed into two groups: activated and instant. Almost all commercially available bioadhesives are instant, which cross-link by mixing two components or on contact with moisture. Activated bioadhesives, on the other hand, allow control of when and where a bioadhesive cross-links and, in some cases, the extent of cross-linking. Despite significant progress, there has been little translation of activated bioadhesives to clinical use. This review discusses recent developments in UV-activated bioadhesives toward addressing unmet clinical needs.
- Published
- 2017
- Full Text
- View/download PDF
12. Elastic Light Tunable Tissue Adhesive Dendrimers.
- Author
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Feng G, Djordjevic I, Mogal V, O'Rorke R, Pokholenko O, and Steele TW
- Subjects
- Animals, Biocompatible Materials chemistry, Biocompatible Materials therapeutic use, Dendrimers therapeutic use, Diazomethane chemistry, Humans, Hydrogel, Polyethylene Glycol Dimethacrylate therapeutic use, Light, Swine, Tissue Adhesives therapeutic use, Dendrimers chemistry, Hydrogel, Polyethylene Glycol Dimethacrylate chemistry, Tissue Adhesives chemistry, Tissue Fixation
- Abstract
Development of bioadhesive formulations for tissue fixation remains a challenge. The major drawbacks of available bioadhesives are low adhesion strength, toxic byproducts, and complexity of application onto affected tissues. In order to address these problems, this study has developed a hydrogel bioadhesive system based on poly amido amine (PAMAM) dendrimer, grafted (conjugated) with UV-sensitive, 4-[3-(trifluoromethyl)-3H-diazirin-3-yl] benzyl bromide (PAMAM-g-diazirine). This particular diazirine molecule can be grafted to the surface amine groups of PAMAM in a one-pot synthesis. Diazirine functionalities are carbene precursors that form covalent crosslinks with hydrated tissues after low-power UV activation without necessity of free-radical initiators. The rheological properties and adhesion strength to ex vivo tissues are highly controllable depending on diazirine grafting, hydrogel concentration, and UV dose intensity fitting variety types of tissues. Covalent bonds at the tissue/bioadhesive interface provide robust adhesive and mechanical strength in a highly hydrated environment. The free flowing hydrogel conversion to elastic adhesive after UV activation allows intimate contact with the ex vivo swine tissue surfaces with low in vitro cytotoxicity observed, making it a promising bioadhesive formulation toward clinical applications., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
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13. New Photochrome Probe Allows Simultaneous pH and Microviscosity Sensing.
- Author
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Wu Y, Papper V, Pokholenko O, Kharlanov V, Zhou Y, Steele TW, and Marks RS
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- Hydrogen-Ion Concentration, Kinetics, Viscosity, Fluorescent Dyes chemistry, Light, Maleates chemistry, Organic Chemicals chemistry, Solvents chemistry, Spectrometry, Fluorescence methods, Stilbenes chemistry, Water chemistry
- Abstract
4-N,N'-dimethylamino-4'-N'-stilbenemaleamic acid (DASMA), a unique molecular photochrome probe that exhibits solubility and retains trans-cis photoisomerisation in a wide range of organic solvents and aqueous pH environments, was prepared, purified and chemically characterised. Absorption, fluorescence excitation and emission spectra and constant-illumination fluorescence decay were measured in acetonitrile, dimethyl sulfoxide, ethanol, propylene carbonate, and aqueous glycerol mixtures. The pseudo-first-order fluorescence decay rates were found to be strongly dependent on the medium viscosity. In addition, the molecule exhibited the pH-dependent fluorescence and photoisomerisation kinetics.
- Published
- 2015
- Full Text
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14. Novel Photochrome Aptamer Switch Assay (PHASA) for adaptive binding to aptamers.
- Author
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Papper V, Pokholenko O, Wu Y, Zhou Y, Jianfeng P, Steele TW, and Marks RS
- Subjects
- Fluorescent Dyes metabolism, Light, Maleimides metabolism, Rosaniline Dyes metabolism, Stilbenes metabolism, Aptamers, Nucleotide metabolism, Biosensing Techniques, Fluorescent Dyes chemistry, Maleimides chemistry, Rosaniline Dyes chemistry, Stilbenes chemistry
- Abstract
A novel Photochrome-Aptamer Switch Assay (PHASA) for the detection and quantification of small environmentally important molecules such as toxins, explosives, drugs and pollutants, which are difficult to detect using antibodies-based assays with high sensitivity and specificity, has been developed. The assay is based on the conjugation of a particular stilbene-analyte derivative to any aptamer of interest. A unique feature of the stilbene molecule is its reporting power via trans-cis photoisomerisation (from fluorescent trans-isomer to non-fluorescent cis-isomer) upon irradiation with the excitation light. The resulting fluorescence decay rate for the trans-isomer of the stilbene-analyte depends on viscosity and spatial freedom to rotate in the surrounding medium and can be used to indicate the presence of the analyte. Quantification of the assay is achieved by calibration of the fluorescence decay rate for the amount of the tested analyte. Two different formats of PHASA have been recently developed: direct conjugation and adaptive binding. New stilbene-maleimide derivatives used in the adaptive binding format have been prepared and characterised. They demonstrate effective binding to the model thiol compound and to the thiolated Malachite Green aptamer.
- Published
- 2014
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15. Lipid oligonucleotide conjugates as responsive nanomaterials for drug delivery.
- Author
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Pokholenko O, Gissot A, Vialet B, Bathany K, Thiéry A, and Barthélémy P
- Abstract
We report Lipid OligoNucleotide conjugates (LONs) bearing either two or three hydrophobic chains. LONs self-assemble into micellar aggregates, which provide a suitable reservoir for hydrophobic drugs such as paclitaxel. Our results demonstrate that the composition of the LONs both in terms of the lipid and the oligonucleotide sequence impacts their ability to host lipophilic molecules. Interestingly, binding of the complementary oligonucleotide selectively induces the release of part of the drug payload of the aggregates. These LON based micelles, which efficiently host hydrophobic drugs, represent an original stimuli-responsive drug delivery system.
- Published
- 2013
- Full Text
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