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The duck‐billed platypus (Ornithorhynchus anatinus) is currently listed as near‐threatened. A key part of the conservation strategy for this species is its captive maintenance; however, captive animals often have dysbiotic gut bacterial microbiomes. Here, for the first time, we characterize the gut microbiome of wild platypus via fecal samples using high‐throughput sequencing of the bacterial 16S rRNA gene and identify microbial biomarkers of captivity in this species. At the phylum level, Firmicutes (50.4%) predominated among all platypuses, followed by Proteobacteria (28.7%), Fusobacteria (13.4%), and Bacteroidota (6.9%), with 21 "core" bacteria identified. Captive individuals did not differ in their microbial α‐diversity compared to wild platypus but had significantly different community composition (β‐diversity) and exhibited higher abundances of Enterococcus, which are potential pathogenic bacteria. Four taxa were identified as biomarkers of wild platypus, including Rickettsiella, Epulopiscium, Clostridium, and Cetobacterium. This contrast in gut microbiome composition between wild and captive platypus is an essential insight for guiding conservation management, as the rewilding of captive animal microbiomes is a new and emerging tool to improve captive animal health, maximize captive breeding efforts, and give reintroduced or translocated animals the best chance of survival. [ABSTRACT FROM AUTHOR]

Summary Platypus (Ornithorhynchus anatinus) are an endemic Australian freshwater mammal, impacted by synergistic threats across their range. During the extreme drought of 2017–2019, declining water levels threatened Platypus at Tidbinbilla Nature Reserve (TNR), Australian Capital Territory (ACT), Australia. TNR supports a population of Platypus, occupying interconnected ponds within a predator proof fence. During drought conditions in 2019, Platypuses could not move out of the fenced area to refugia as floodgates were closed due to low water levels. In winter of 2019, eight Platypuses were found deceased resulting from starvation. By December, water levels were extremely low and ponds were continuing to dry. Given these circumstances, a rescue intervention was undertaken to capture stranded Platypuses. They were temporarily relocated and housed at Taronga Zoo, Sydney, until they were returned when conditions at TNR improved. Seven Platypuses were rescued, with five successfully housed at Taronga for 5 months. One Platypus was lost after escaping from its enclosure and another Platypus died when trapped in a crevice. The Platypuses were returned after water levels increased at TNR and were monitored for 500 days post‐release, demonstrating successful repatriation. This case study outlines the key stages and considerations required for this intervention, providing critical information for rescue attempts on drought‐affected Platypus populations. There is a need to continue developing a decision framework for interventions of climate‐affected populations, including quantifying trigger thresholds and conservation prioritisation of populations. This will become increasingly necessary given the trajectories of habitat degradation, coupled with the increasingly frequent and severe droughts, expected under anticipated climate change scenarios. [ABSTRACT FROM AUTHOR]

ABSTRACT Aim Location Methods Results Main Conclusions Species presence–absence data can be time‐consuming and logistically difficult to obtain across large spatial extents. Yet these data are important for ensuring changes in species distributions are accurately monitored and are vital for ensuring appropriate conservation actions are undertaken. Here, we demonstrate how environmental DNA (eDNA) sampling can be used to systematically collect species occupancy data rapidly and efficiently across vast spatial domains to improve understanding of factors influencing species distributions.South‐eastern Australia.We use a widely distributed, but near‐threatened species, the platypus (Ornithorhynchus anatinus), as a test case and undertake an environmentally stratified systematic survey to assess the presence–absence of platypus eDNA at 504 sites across 584,292 km2 of south‐eastern Australia, representing ~37% of the species' extensive distribution. Site occupancy‐detection models were used to analyse how landscape‐ and site‐level factors affect platypus occupancy, enabling us to incorporate uncertainty at the different levels inherent in eDNA sampling (site, water sample replicate and qPCR replicate).Platypus eDNA was detected at 272 sites (~54%) with platypuses more likely to occupy sites in catchments with increased runoff and less zero‐flow days, and sites with access to banks suitable for burrowing. Platypuses were less likely to occupy sites in catchments with a high proportion of shrubs and grasslands, or agricultural land use.These data provide an important large‐scale validation of the landscape‐ and site‐level factors influencing platypus occupancy that can be used to inform future conservation efforts. Our case study shows that systematically designed, stratified eDNA surveys provide an efficient means to understand how environmental characteristics affect species occupancy across broad environmental gradients. The methods employed here can be applied to aquatic and semi‐aquatic species globally, providing unprecedented opportunities to understand biodiversity status and change and provide insights for current and future conservation actions. [ABSTRACT FROM AUTHOR]

Fluid preserved animal specimens in the collections of natural history museums constitute an invaluable archive of past and present animal diversity. Well-preserved specimens have a shelf-life spanning centuries and are widely used for e.g. anatomical, taxonomical and genetic studies. The way specimens were collected depended on the type of animal and the historical setting. As many small mammals and birds were historically collected by shooting, large quantities of heavy metal residues, primarily lead, may have been introduced into the sample in the form of lead shot pellets. Over time, these pellets may react with tissue fluids and/or the fixation and preservation agents and corrode into lead salts. As these chemicals are toxic, they could constitute a health issue to collection staff. Additionally, heavy element chemicals interfere with several imaging technologies increasingly used for non-invasive studies, and may confound anatomical and pathological investigations on affected specimens. Here we present a case-study based on platypus (Ornithorhynchus anatinus) and other small mammals containing lead pellets from the collection of The Natural History Museum of Denmark. [ABSTRACT FROM AUTHOR]

Simple Summary: The platypus (Ornithorhynchus anatinus) is a monotreme, a rare kind of mammal that lays eggs and suckles its young. It is amphibious, lives in freshwater, and is found only in Australia, where it is closely protected. During prior conservation studies, several pathogens had been discovered in the platypus, including leptospires, which are a kind of bacterium that can cause severe disease in animals and people. We evaluated the available data concerning this infection in platypuses, tested blood samples in the Platypus Serum Bank, and combined the results with historical records. We found evidence of leptospirosis in 50% of platypuses from 14 river basins in southeastern Australia. Leptospiral infection did not stop females from breeding and juvenile platypuses were recruited to the population each year. The high seroprevalence, evidence of ongoing exposure to leptospires, lack of disease, mild kidney pathology, and visible leptospires in the kidney tubules suggest that the platypus may be a reservoir host for leptospires rather than an accidental host that suffers from the disease. Cattle on adjacent farms also had leptospirosis, but the evidence was not convincing that cattle caused the infection in platypuses. A landscape-wide study is recommended to determine the actual infection pathway. The platypus (Ornithorhynchus anatinus) is an amphibious, egg-laying mammal of high conservation value that is found only in Australia. The zoonotic bacterium Leptospira interrogans serovar Hardjo was discovered in platypuses in prior studies, but little is known about its epidemiology. Samples in the Platypus Serum Bank were tested in 2023 and the results were combined with historical records. Antibodies against L. interrogans serovar Hardjo were found in 50% of 464 serum samples from 411 platypuses collected from 14 river basins in southeastern Australia between 1981 and 2012; prevalence remained high over three decades in the Shoalhaven River population. Seroprevalence increased with age, suggesting environmental exposure. Individual platypuses had persistent titres, some for six years. Seropositive females lactated, juveniles were recruited into the population, and there were no reports of clinical leptospirosis. Three necropsied platypuses were seropositive and had mild nephritis with leptospires in the renal tubules. The high seroprevalence, persistent titres, lack of disease, mild renal lesions, and renal colonisation suggest the platypus may be a maintenance host. Sympatric cattle had L. interrogans serovar Hardjo titres, but the spatial association with seropositive platypuses was statistically weak. Other mammalian wildlife species and sheep also have L. interrogans serovar Hardjo titres; therefore, a complex ecological network must be considered. A landscape-wide study is recommended to properly assess transmission pathways and confirm who is infecting whom. [ABSTRACT FROM AUTHOR]

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The pale chub Zacco platypus (Cypriniformes; Xenocyprididae; Jordan & Evermann, 1902) is widely distributed across freshwater ecosystems in East Asia and has been recognized as a potential model fish species for ecotoxicology and environmental monitoring. Here, a high-quality de novo genome assembly of Z. platypus was constructed through the integration of a combination of long-read Pacific Bioscience (PacBio) sequencing, short-read Illumina sequencing, and Hi-C sequencing technologies. Z. platypus has the smallest genome size compared to other species belonging to the order Cypriniformes. The assembled genome encompasses 41.45% repeat sequences. As shown in other fish, a positive correlation was observed between genome size and the composition of transposable elements (TE) in the genome. Among TEs, a relatively higher rate of DNA transposon was observed, which is a common pattern in the members of the order Cypriniformes. Functional annotation was processed using four representative databases, identifying a core set of 12,907 genes shared among them. Orthologous gene family analysis revealed that Z. platypus has experienced more gene family contraction rather than expansion compared to other Cypriniformes species. Among the uniquely expanded gene families in Z. platypus, detoxification and stress-related gene families were identified, suggesting that this species could represent a promising model for ecotoxicology and environmental monitoring. Taken together, the Z. platypus genome assembly will provide valuable data for omics-based health assessments in aquatic ecosystems, offering further insights into the environmental and ecological facets within this species. [ABSTRACT FROM AUTHOR]

The temporomandibular joint (TMJ) is a distinguishing feature of mammals, and in most mammals includes an articular disc that buffers the loads placed on it by mastication. The disc is well developed in mammals with significant lateral masticatory jaw movements but is absent in toothless mammals, including extant monotremes, although histological studies of developing monotremes have shown rudimentary discs that fail to mature. Platypus (Ornithorhynchus anatinus) grind their food between keratinous pads in the maxillae and lower jaws and are the only edentulate mammals that masticate their food. In this study, we characterize the anatomy of the TMJ of the adult platypus to see if we can reconcile the anatomy, including the absence of the articular disc, with the mandibular movements observed in video recordings. We studied the gross anatomy of the maxillofacial region and the microstructure using microcomputed tomography (micro‐CT) and histological examination. Platypuses had well‐developed masticatory muscles but lacked an articular disc between the mandibular condyle and glenoid fossa. The surface of the glenoid fossa was slightly concave than that of the condylar head was correspondingly slightly convex. The pre‐ and postglenoid processes were not well developed. Micro‐CT showed dense trabecular bone in the anterior part of the condyle, where the lateral pterygoid muscle attached. Histological analysis showed that the surfaces of the condyle and glenoid fossa consisted of dense, avascular and thickened fibrous connective tissue. In addition, well‐developed synovial folds were present. These anatomical characteristics are consistent with both anterior and lateral movements of the mandible, while the thick layer of connective tissue substitutes for a disc by absorbing the mechanical stresses associated with mastication. The failure of the disc primordium to develop cannot be attributed to a lack of muscle development, but the distribution of stresses in the toothless platypus jaw is likely to be different from those in a masticating eutherian. [ABSTRACT FROM AUTHOR]

Heteromorphic sex chromosomes (XY or ZW) present problems of gene dosage imbalance between sexes and with autosomes. A need for dosage compensation has long been thought to be critical in vertebrates. However, this was questioned by findings of unequal mRNA abundance measurements in monotreme mammals and birds. Here, we demonstrate unbalanced mRNA levels of X genes in platypus males and females and a correlation with differential loading of histone modifications. We also observed unbalanced transcripts of Z genes in chicken. Surprisingly, however, we found that protein abundance ratios were 1:1 between the sexes in both species, indicating a post-transcriptional layer of dosage compensation. We conclude that sex chromosome output is maintained in chicken and platypus (and perhaps many other non therian vertebrates) via a combination of transcriptional and post-transcriptional control, consistent with a critical importance of sex chromosome dosage compensation. [ABSTRACT FROM AUTHOR]

The platypus (Ornithorhynchus anatinus) is a semi-aquatic monotreme that occupies a high trophic position in the freshwater ecosystems of eastern mainland Australia and Tasmania. Platypuses are continuously exposed to anthropogenic contaminants including perfluorooctane sulfonate (PFOS). This study examined PFOS concentrations in the livers of deceased platypuses (eight wild; one captive) that were opportunistically collected across NSW over a two- and a half-year period. There was a large variation in PFOS concentrations, ranging from < 1 µg/kg to 1200 µg/kg. This study presents the first report of PFOS contamination in platypuses, revealing their PFOS levels are broadly similar to those found in river otters (Lutra canadensis) and lower than those in American mink (Mustela vison), both which occupy similar ecological niches in freshwater systems. This study raises concerns about the impact of PFOS on platypus health. [ABSTRACT FROM AUTHOR]

The planting mechanism of existing transplanters cannot meet the agronomic requirements of planting densely planted vegetables with multiple rows, small plant spacing, and small row spacing. In order to solve this current problem, an eight-row duckbill planting mechanism driven by a motor and a cylinder was designed. According to the agronomic guidance and mechanism design requirements for transplanting densely planted vegetable seedlings, this paper analyzes the working principle of the planting mechanism, establishes its kinematic theoretical model, and determines the structural parameters of the driving device and opening and closing device in the planting mechanism. Aimed at the problem of large planting resistance when eight-row planting end effectors of the planting mechanism are planting at the same time, based on the existing research, three duckbill planting end effectors with double incisions, four incisions, and conical structures were selected, and the planting process was simulated using an EDEM 2022-RecurDyn 2024 coupling simulation. The single-factor analysis method and the interactive factor Box–Behnken response surface analysis method were used. It is concluded that the duckbill end effector with double incisions has the smallest planting resistance, and the rationality of the mechanism design is preliminarily verified. A planting resistance measurement platform was built based on the STM32 platform and HX711 module, and a planting resistance test of the duckbill planting end effector was carried out to verify the correctness of the planting mechanism simulation results. The planting mechanism performance test was carried out, and the test results showed that the planting qualification rate of the prototype reached 96.62%, the planting spacing variation coefficient was only 3.55%, and the planting efficiency reached about 7135 plants/h, which met the agronomic requirements of small plant spacing and small row spacing for densely planted vegetables and verified the feasibility and practicality of the planting mechanism. [ABSTRACT FROM AUTHOR]

We report on a male platypus (Ornithorhynchus anatinus) who was tagged in November 2000 at the age of 1 year and recaptured in September 2023, when nearly 24 years old, in a small creek system in Melbourne's southeastern suburbs. By comparison, a female platypus recently reached the age of 30 years in captivity, though with signs of ageing that may have precluded her survival if she were living in the wild. Ten other captive individuals have lived to an age of more than 20 years in recent decades. A new platypus longevity record in the wild (nearly 24 years) has been confirmed for a male living in a creek in Melbourne's southeastern suburbs. In captivity, a female platypus recently reached the age of 30 years at Healesville Sanctuary. Photograph by Barry Baker. [ABSTRACT FROM AUTHOR]

The platypus is a challenging species to survey and monitor. We investigated the use of time-lapse cameras to detect platypus activity in a Tasmanian creek by deploying three camera models diurnally at a single site over 6 months, and deploying one model both nocturnally and diurnally at two sites over 12 months. Variation in camera attributes and settings (camera view angle, length of time-lapse intervals) contributed to a 10-fold difference in the mean number of platypus images recorded in a given behavioural sequence (or 'event') and an approximately 50% difference in median event duration among the three models. Results also varied between sites and at diel and bimonthly time scales due to pool topography, day length (affecting site illumination) and likely temporal differences in platypus activity and population size. However, even the least-effective camera model reliably captured ≥1 platypus image within the first 24 h of deployment at the two study sites throughout the year. Time-lapse cameras are a suitable tool to assess platypus occurrence and measure activity, as long as appropriate equipment is selected for the intended purpose and sources of spatial and temporal variation are carefully considered when designing studies and interpreting results. We investigated how equipment-related differences and sources of spatial and temporal variation affected how often platypus activity was recorded by time-lapse camera models along a southern Tasmanian creek. The results confirm that time-lapse cameras can be a useful tool for platypus detection and monitoring. Photograph by Simon Roberts. [ABSTRACT FROM AUTHOR]

Severe flooding in early 2020 and 2021 necessitated major desedimentation works at the iconic Blue Lake in the Jenolan Karst Conservation Reserve (JKCR). Movements and behaviour of platypuses were monitored before, during and after these works, using direct observations, remote cameras and environmental DNA (eDNA) sampling. Platypuses were observed along a 3 km reach of the Jenolan River, including the areas where works occurred, although in low numbers. In their use of the available waterways, platypuses negotiated artificial barriers, including a 10 m high dam, two smaller weirs and natural waterfalls and cascades. Overland movements were detected through vegetation tunnels, drainage pipes and culverts, and individuals were seen entering the cave system, where eDNA was also detected. Platypuses responded to the works activity by foraging outside the affected areas but also continued to traverse these areas from time to time. We describe movements around and through instream infrastructure and past natural barriers and report on other species detected by remote cameras. These observations could help planning and deployment of bypasses suitable for movement of platypuses around anthropogenic barriers and provide insights into impediments to dispersal and gene flow within stream systems. Because of their cryptic nature and being active predominately at night, movement of wild platypuses is poorly documented. Our studies of their movements in the upper Jenolan River showed them moving around and through natural and artificial instream structures, including across weirs, through culverts, around waterfalls and entering caves. This research is important to the management and conservation of the species in relation to human activities in rivers. Photograph by Anne Musser. [ABSTRACT FROM AUTHOR]

The regressive evolution of independent lineages often results in convergent phenotypes. Several teleost groups display secondary loss of the stomach, and four gastric genes, atp4a, atp4b, pgc, and pga2 have been co-deleted in agastric (stomachless) fish. Analyses of genotypic convergence among agastric fishes showed that four genes, slc26a9, kcne2, cldn18a, and vsig1, were co-deleted or pseudogenized in most agastric fishes of the four major groups. kcne2 and vsig1 were also deleted or pseudogenized in the agastric monotreme echidna and platypus, respectively. In the stomachs of sticklebacks, these genes are expressed in gastric gland cells or surface epithelial cells. An ohnolog of cldn18 was retained in some agastric teleosts but exhibited an increased non-synonymous substitution when compared with gastric species. These results revealed novel convergent gene losses at multiple loci among the four major groups of agastric fish, as well as a single gene loss in the echidna and platypus. Several teleost groups display secondary loss of the stomach. Analyses of genotypic convergence among agastric fishes showed that four genes, slc26a9, kcne2, cldn18a, and vsig1, are co-deleted or pseudogenized in most agastric fishes. [ABSTRACT FROM AUTHOR]

Zacco platypus is an endemic colorful freshwater minnow that is intensively distributed in East Asia. In this study, two adult female individuals collected from Haihe River basin were used for karyotypic study and genome sequencing, respectively. The karyotype formula of Z. platypus is 2N = 48 = 18 M + 24SM/ST + 6 T. We used PacBio long-read sequencing and Hi-C technology to assemble a chromosome-level genome of Z. platypus. As a result, an 814.87 Mb genome was assembled with the PacBio long reads. Subsequently, 98.64% assembled sequences were anchored into 24 chromosomes based on the Hi-C data. The chromosome-level assembly contained 54 scaffolds with a N50 length of 32.32 Mb. Repeat elements accounted for 52.35% in genome, and 24,779 protein-coding genes were predicted, with 92.11% were functionally annotated with the public databases. BUSCO analysis yielded a completeness score of 96.5%. This high-quality genome assembly provides valuable resources for future functional genomic research, comparative genomics, and evolutionary studies of genus Zacco. [ABSTRACT FROM AUTHOR]

To tackle the issues of low seeding accuracy and seed injury caused by the seeders utilized at a small scale and in the plot seeding of sorghum in mountainous or hilly regions, this study presents the design of an oil–electric hybrid air suction sorghum plot seeder. The main working parts of the seeder are described, and the performance of the seed-mixing device is simulated using EDEM software. An oil–electric hybrid drive mode is used to provide power for operation and to the seed-metering device and fan. Additionally, a sowing control and monitoring system is designed using a single-chip microcomputer controller to ensure uniform plant spacing at different forward speeds. A multi-factor experiment is conducted using the central synthesis method to determine the optimal operating parameters of the seed-metering device through bench tests. The results show that a profile hole diameter of 2.5 mm on the seed tray, a negative-pressure chamber vacuum of 8.0 kPa, and a seed-metering device speed of 28 r/min result in a 95.95% pass rate, 0.5% missing rate, and 3.55% reseeding rate. The deviation between the experimental and analytical results that validate the optimum parameters is kept within acceptable limits. Field tests are conducted at different forward speeds using the optimum parameter combinations, and a comparison is made with the widely used duckbill planter. The results show pass, missing, and reseeding rates of 94.41%, 2.3%, and 3.29%, respectively. The missing monitoring error is less than 7.19%. All of the indices of the oil–electric hybrid air suction sorghum plot seeder are superior to those of the duckbill planter; thus, it fulfills the agronomic requirements for seeding a sorghum plot. [ABSTRACT FROM AUTHOR]

Platypuses are the world's most evolutionarily distinct mammal and have several host-specific ecto- and endoparasites. With platypus populations declining, consideration should also be given to preserving these high conservation priority parasites alongside their charismatic host. A disease risk analysis (DRA) was performed for a platypus conservation translocation, using a modified streamlined methodology that incorporated a parasite conservation framework. DRA frameworks rarely consider parasite conservation. Rather, parasites are typically considered myopically in terms of the potential harm they may cause their host. To address this, a previously proposed parasite conservation framework was incorporated into an existing streamlined DRA methodology. Incorporation of the two frameworks was achieved readily, although there is opportunity for further refinement of this process. This DRA is significant as it is the first performed for any monotreme species, and implements the emerging approach of balancing the health and disease risk of the host with parasite conservation.

The platypus (Ornithorhynchus anatinus) is an amphibious, egg-laying mammal of high conservation value that is found only in Australia. The zoonotic bacterium Leptospira interrogans serovar Hardjo was discovered in platypuses in prior studies, but little is known about its epidemiology. Samples in the Platypus Serum Bank were tested in 2023 and the results were combined with historical records. Antibodies against L. interrogans serovar Hardjo were found in 50% of 464 serum samples from 411 platypuses collected from 14 river basins in southeastern Australia between 1981 and 2012; prevalence remained high over three decades in the Shoalhaven River population. Seroprevalence increased with age, suggesting environmental exposure. Individual platypuses had persistent titres, some for six years. Seropositive females lactated, juveniles were recruited into the population, and there were no reports of clinical leptospirosis. Three necropsied platypuses were seropositive and had mild nephritis with leptospires in the renal tubules. The high seroprevalence, persistent titres, lack of disease, mild renal lesions, and renal colonisation suggest the platypus may be a maintenance host. Sympatric cattle had L. interrogans serovar Hardjo titres, but the spatial association with seropositive platypuses was statistically weak. Other mammalian wildlife species and sheep also have L. interrogans serovar Hardjo titres; therefore, a complex ecological network must be considered. A landscape-wide study is recommended to properly assess transmission pathways and confirm who is infecting whom.

Two new diatom species belonging to the genus Gomphonemopsis are described, Gomphonemopsis nana sp. nov. and Gomphonemopsis gaoi sp. nov. These two species were compared in detail with congeners. Gomphonemopsis nana is distinguished by its high stria density and small size. This species was found so far to be epiphytic only on the eelgrass collected from Qingdao Bay (Yellow Sea). Gomphonemopsis gaoi is characterized by its isopolar valves, simple proximal raphe endings and acutely rounded apices. This taxon was separated from the exoskeleton of marine copepods sampled from the Futian Mangrove Nature Reserve (South China Sea). In addition, two new combinations, Gomphonemopsis oahuensis (Hustedt) Lang Li, Yuhang Li & Changping Chen, comb. nov. and Gomphonemopsis platypus (Østrup) Lang Li, Yuhang Li & Junxiang Lai, comb. nov. are proposed. This study increases the records and knowledge of Gomphonemopsis along the coast of China. [ABSTRACT FROM AUTHOR]

The ambrosia beetle Platypus quercivorus is a vector of a pathogenic fungus that causes Japanese oak wilt. Its host is Fagaceae trees; however, these beetles also erroneously bore into unsuitable, non‐host tree species, which can be affected by neighbouring host tree species and the size of the non‐host.We attached sticky sheets to the host and non‐host tree species of P. quercivorus and counted the number of beetles that landed weekly, in a season of beetle dispersal. We quantified the density of the host canopy above, the basal area of surrounding hosts and the diameter at breast height (DBH) of each non‐host tree.The host canopy density affected the probability of beetles landing on non‐hosts, and the host basal area and non‐host DBH affected the number of beetles landing on non‐hosts. Thus, P. quercivorus is probably initially attracted to a dense host canopy, secondly attracted to the high density of the host and thereafter aggregate onto thick trees, including non‐host species.The number of beetles landing on the surrounding host also affected beetle landing on the non‐hosts, suggesting that landing on non‐hosts is an error that occurs in high frequency during the seasons when many beetles land on the hosts. [ABSTRACT FROM AUTHOR]

The function of the skin as a barrier against the environment depends on the differentiation of epidermal keratinocytes into highly resilient corneocytes that form the outermost skin layer. Many genes encoding structural components of corneocytes are clustered in the epidermal differentiation complex (EDC), which has been described in placental and marsupial mammals as well as non-mammalian tetrapods. Here, we analyzed the genomes of the platypus (Ornithorhynchus anatinus) and the echidna (Tachyglossus aculeatus) to determine the gene composition of the EDC in the basal clade of mammals, the monotremes. We report that mammal-specific subfamilies of EDC genes encoding small proline-rich proteins (SPRRs) and late cornified envelope proteins as well as single-copy EDC genes such as involucrin are conserved in monotremes, suggesting that they have originated in stem mammals. Monotremes have at least one gene homologous to the group of filaggrin (FLG), FLG2 and hornerin (HRNR) in placental mammals, but no clear one-to-one pairwise ortholog of either FLG, FLG2 or HRNR. Caspase-14, a keratinocyte differentiation-associated protease implicated in the processing of filaggrin, is encoded by at least 3 gene copies in the echidna. Our results reveal evolutionarily conserved and clade-specific features of the genetic regulation of epidermal differentiation in monotremes. [ABSTRACT FROM AUTHOR]

Egg-laying mammals (monotremes) are considered "primitive" due to traits such as oviparity, cloaca, and incomplete homeothermy, all of which they share with reptiles. Two groups of monotremes, the terrestrial echidna (Tachyglossidae) and semiaquatic platypus (Ornithorhynchidae), have evolved highly divergent characters since their emergence in the Cenozoic era. These evolutionary differences, notably including distinct electrosensory and chemosensory systems, result from adaptations to species-specific habitat conditions. To date, very few studies have examined the visual adaptation of echidna and platypus. In the present study, we show that echidna and platypus have different light absorption spectra in their dichromatic visual sensory systems at the molecular level. We analyzed absorption spectra of monotreme color opsins, long-wavelength sensitive opsin (LWS) and short-wavelength sensitive opsin 2 (SWS2). The wavelength of maximum absorbance (λmax) in LWS was 570.2 in short-beaked echidna (Tachyglossus aculeatus) and 560.6 nm in platypus (Ornithorhynchus anatinus); in SWS2, λmax was 451.7 and 442.6 nm, respectively. Thus, the spectral range in echidna color vision is ~ 10 nm longer overall than in platypus. Natural selection analysis showed that the molecular evolution of monotreme color opsins is generally functionally conserved, suggesting that these taxa rely on species-specific color vision. In order to understand the usage of color vision in monotremes, we made 24-h behavioral observations of captive echidnas at warm temperatures and analyzed the resultant ethograms. Echidnas showed cathemeral activity and various behavioral repertoires such as feeding, traveling, digging, and self-grooming without light/dark environment selectivity. Halting (careful) behavior is more frequent in dark conditions, which suggests that echidnas may be more dependent on vision during the day and olfaction at night. Color vision functions have contributed to dynamic adaptations and dramatic ecological changes during the ~ 60 million years of divergent monotreme evolution. The ethogram of various day and night behaviors in captive echidnas also contributes information relevant to habitat conservation and animal welfare in this iconic species, which is locally endangered. [ABSTRACT FROM AUTHOR]

Saproxylic beetles are in the spotlight of conservation biology. Crete (Greece) constitutes a special biogeographical entity and an endemism hotspot for many organisms. Despite its poor forest coverage and the continuous degradation of Cretan forests by human activities, Crete hosts an impressive assemblage of saproxylic Coleoptera, some of them being endemic of the island or/and threatened under the I.U.C.N. criteria. Herein we present new data regarding several saproxylic Coleoptera species of Crete, reporting the first records of five species for the Cretan entomofauna [Calais parreysii (Steven, 1829), Dorcus parallelipipedus (Linnaeus, 1758), Dorcus peyronis Reiche and Saulcy, 1856, Platypus cylindrus (Fabricius, 1792) and Echinocerus floralis (Pallas, 1773)]. [ABSTRACT FROM AUTHOR]

In the realm of high-speed precision broadcasting, the existing seeder opener proves inadequate for the speed of the seeding operation. We focus on the duckbill opener and employ the quadratic regression orthogonal rotation combination test design method to optimize the structural parameters of the opener. Throughout the experiment, the primary performance metrics encompassed the opener's working resistance and the side dumping distance. The selected experimental factors comprised the penetration angle, the angle of soil entry gap, the shovel body width, and the shovel length. The optimal arrangement of structural parameters has been determined: a penetration angle, a soil entry gap angle, a shovel body width of 21 mm, and a shovel length of 142 mm. These parameters contribute to increased velocity, reduced operational resistance, and minimal soil disturbance. Under this combination, the relative deviations between the recorded measurements and the theoretical outcomes for working resistance and the side dumping distance stand at 4.24% and 1.06%, respectively; these confirm the credibility of the optimization results. We performed adaptability testing and conducted a comparative analysis under various operational conditions to assess the innovative opener's ability to reduce force, minimize soil disruption, and maintain depth stability. The findings are as follows: At a depth of 5 cm and velocities ranging from 6 km/h to 8 km/h, an average working resistance reduction of 19.73%, a 5.64% decrease in the side dumping distance, and an average depth stability of 89.5% were observed. When operated at a speed of 7 km/h with a depth ranging from 3 cm to 5 cm, an average reduction of 19.66% in operational resistance, a 2.59% decrease in the side dumping distance, and an average depth stability of 91.1% were recorded. These results illustrate the innovative opener's capacity to significantly reduce working resistance and side dumping distance while satisfying the depth stability requisites. [ABSTRACT FROM AUTHOR]

Genetic mutations resulting in abnormal colouration occur across all vertebrate groups but are considered rare, especially in mammals. Hypo-pigmentary conditions can be separated into albinism, leucism and piebaldism. The impact of colour variation on an animal's risk of predation and its ability to blend with its surroundings is widely recognised. We report our observations of a white platypus (Ornithorhynchus anatinus) in a tributary of the Gwydir River in the upper reaches of the Murray Darling Basin, New South Wales, Australia. We describe our observations in the context of historical platypus records since 1835. [ABSTRACT FROM AUTHOR]

Background: The accurate detection of variants is essential for genomics-based studies. Currently, there are various tools designed to detect genomic variants, however, it has always been a challenge to decide which tool to use, especially when various major genome projects have chosen to use different tools. Thus far, most of the existing tools were mainly developed to work on short-read data (i.e., Illumina); however, other sequencing technologies (e.g. PacBio, and Oxford Nanopore) have recently shown that they can also be used for variant calling. In addition, with the emergence of artificial intelligence (AI)-based variant calling tools, there is a pressing need to compare these tools in terms of efficiency, accuracy, computational power, and ease of use. Results: In this study, we evaluated five of the most widely used conventional and AI-based variant calling tools (BCFTools, GATK4, Platypus, DNAscope, and DeepVariant) in terms of accuracy and computational cost using both short-read and long-read data derived from three different sequencing technologies (Illumina, PacBio HiFi, and ONT) for the same set of samples from the Genome In A Bottle project. The analysis showed that AI-based variant calling tools supersede conventional ones for calling SNVs and INDELs using both long and short reads in most aspects. In addition, we demonstrate the advantages and drawbacks of each tool while ranking them in each aspect of these comparisons. Conclusion: This study provides best practices for variant calling using AI-based and conventional variant callers with different types of sequencing data. [ABSTRACT FROM AUTHOR]

Acoustic communication occurs in all major groups of terrestrial vertebrates, having evolved independently in early clades of mammals, birds, geckos, crocodilians and frogs, about 100–200 MYA. There is little doubt that acoustic communication was used by ancestral therian mammals, but it is ambiguous whether the reconstruction of the root of the mammalian acoustic evolutionary tree includes basal prototherian monotremes. We present here five first‐hand accounts of dove‐like cooing sounds and analyse the acoustics of three vocalization recordings for two observations of wild short‐beaked echidnas (Tachyglossus aculeatus) to quantitatively confirm acoustic communication by this species. The 'cooing' tones were quite distinctive from exhalations, wheezes and grunts, being ~0.044 s down‐sweeps from ~320 to 190 Hz, peaking at ~260 Hz, with at least one harmonic overtone. Tones occurred singly or as doublets, triplets (most common), quadruplets and quintuplets, with the leading tone typically the strongest and most broadband. We conclude that echidnas do produce vocalizations, but they are infrequent and acoustic communication is not their primary mode of communication. This unequivocal evidence for vocalization by short‐beaked echidnas resolves a long‐standing debate concerning the occurrence of acoustic communication by echidnas, which together with well‐documented vocalizations by platypus, support a very early evolution of acoustic communication amongst mammals, pre‐dating at least the common ancestor of monotremes and therian mammals. [ABSTRACT FROM AUTHOR]

This study examined the association of various brands of NIOSH-certified N95 filtering face-piece respirators (FFR) fit with facial dimensions and gender. One hundred and thirty-five participants (77 females and 58 males) were recruited from the previous facial anthropometry study among Malaysians in 2020. Quantitative respirator fit testing of six FFR were performed using the TSI Portacount Pro+ 8038 which comprised of four exercises (bending over, talking, up-down head movement, and side to side head movement). An overall fit factor (FF) of ≥ 100 was considered a pass for each FFR. Analysis was done using T-test, Pearson's correlations, and generalised linear regression. The passing rates for the six FFR were 36.3% (Cup B), 50.4% (Trifold A), 54.1% (Duckbill A), 57.0% (Cup A), 74.1% (Trifold B), and 83.7% (Duckbill B). Both Duckbill B and Trifold B had the highest passing rates for both genders. However, certain FFR models (Cup B, Trifold A, Trifold B, and Duckbill A) fit better for participants with large facial size who were mostly males, while others (Cup A and Duckbill B) specifically fit better for those with small facial size, who were mostly females. This study showed significant positive effect of nose protrusion, nasal root and subnasale-sellion and the negative effect of menton-sellion, bigonial breadth and nose breadth on fit factors of various FFR. The results of this study emphasized the importance of choosing and designing FFR based on local anthropometry data, with careful consideration on the dimensions that affect the respirator fit. Since N95 are commonly used in the healthcare settings to prevent airborne transmission, the practice of respirator fit testing and selecting N95 with high passing rates for healthcare workers need to be emphasized. [ABSTRACT FROM AUTHOR]

Length-weight relationships (LWRs) were reported for ten fish species (Abbottina rivularis, Hemibarbus labeo, Hemibarbus maculatus, Onychostoma macrolepis, Opsariichthys bidens, Rhynchocypris lagowskii, Schizothorax prenanti, Sinibrama macrops, Zacco platypus, and Siniperca scherzeri). Fishes were collected from 62 sampling stations covering an area of ∼7000 km2 in the Qinling Mountains, characterized by unique fauna and distribution pattern, using gillnets and ground cages during June to December 2022. The intercept a ranged from 0.013 for S. prenanti to 0.060 for H. labeo, and the slope b ranged from 2.537 for H. labeo to 3.079 for Z. platypus. [ABSTRACT FROM AUTHOR]

Would you rather kiss a platypus, a hedgehog, or a llama? According to a new study in this issue of PLOS Biology, the virulence of a zoonotic virus in humans depends on its reservoir host. Could physiology be the key to anticipating viral threats lethality? Would you rather kiss a platypus, a hedgehog or a llama? This study explores a new study in PLOS Biology which uses evolutionary epidemiology models to show that the life-history of the reservoir mammal hosts of zoonotic viruses might be the key to predicting their virulence in humans. [ABSTRACT FROM AUTHOR]

Egg-laying mammals (monotremes) are the only extant mammalian outgroup to therians (marsupial and eutherian animals) and provide key insights into mammalian evolution1,2. Here we generate and analyse reference genomes of the platypus (Ornithorhynchus anatinus) and echidna (Tachyglossus aculeatus), which represent the only two extant monotreme lineages. The nearly complete platypus genome assembly has anchored almost the entire genome onto chromosomes, markedly improving the genome continuity and gene annotation. Together with our echidna sequence, the genomes of the two species allow us to detect the ancestral and lineage-specific genomic changes that shape both monotreme and mammalian evolution. We provide evidence that the monotreme sex chromosome complex originated from an ancestral chromosome ring configuration. The formation of such a unique chromosome complex may have been facilitated by the unusually extensive interactions between the multi-X and multi-Y chromosomes that are shared by the autosomal homologues in humans. Further comparative genomic analyses unravel marked differences between monotremes and therians in haptoglobin genes, lactation genes and chemosensory receptor genes for smell and taste that underlie the ecological adaptation of monotremes.