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The effect of invertebrates like termites and beetle larvae on dead wood could be time-dependent due to changes in wood traits and invertebrate species composition over time. This study assessed changes in the impact of termites and beetle larvae on dead wood decomposition in two tree species, Pinus densiflora and Quercus acutissima, in South Korea over a 6-year period (2016–2022). Wood samples were prepared, with half of them encased in a stainless-steel mesh to prevent access by invertebrates larger than 0.26 mm. These samples were placed in three regions representative of different environments in South Korea (southern, eastern, and western). Significant variations in the mass loss of dead wood were observed based on the tree species, region, and time (p < 0.05). The mean standardized invertebrate effect, assessed with Hedges' d and a 95% confidence interval, was 0.83 ± 2.19 for P. densiflora and 1.08 ± 2.26 for Q. acutissima. Termites were found in the southern and western regions, with the highest invertebrate effect after two years. Our results indicate that the influence of invertebrates, especially termites, on dead wood decomposition could be most significant during the initial decomposition stages, as noted in the southern region of this research. [ABSTRACT FROM AUTHOR]

Trees in degraded forest areas are generally exposed to water stress due to harsh environmental conditions, threatening their survival. This study simulated the environmental conditions of a degraded forest area by constructing an artificial rainfall slope and observing the physiological responses of Pinus densiflora to control, mulching, and waterbag treatments. P. densiflora exhibited distinct isohydric plant characteristics of reducing net photosynthetic rate and stomatal transpiration rate through regulating stomatal conductance in response to decreased soil moisture, particularly in the control and waterbag treatments. Additionally, the trees increased photochemical quenching, such as Y(NPQ), to dissipate excess energy as heat and minimize damage to the photosynthetic apparatus. However, these adaptive mechanisms have temporal limitations, necessitating appropriate measures. Under extreme drought stress (DS45), mulching treatment showed 4.5 times and 2.2 times higher in PIabs and SFIabs than in the control, and after the recovery period (R30), waterbag and mulching treatment showed similar levels, while PIabs and SFIabs in the control were only 45% and 75% of those in the mulching and waterbag treatments, respectively. Specifically, mulching extended the physiological mechanisms supporting survival by more than a week, making it the most effective method for enhancing the planting ground in degraded forest areas. Although the waterbag treatment was less effective than mulching treatment, it still significantly contributed to forming better growth conditions compared to the control. These findings highlight the potential for mulching and waterbag treatments to enhance forest restoration efforts, suggesting future research and application could lead to more resilient reforested areas capable of withstanding climate change-induced drought conditions. [ABSTRACT FROM AUTHOR]

Pine wilt disease is one of the most serious forest diseases that kills pine trees. Most of the nematode-infected pines are fumigated or locally incinerated and are thus not appropriately utilized. This study explored methods to utilize abandoned nematode-infected pines. The chemical compositions of healthy and nematode-infected pines were analyzed, and the neuroprotective effects of phenolic compounds extracted after steam explosion treatment were investigated. In terms of chemical composition, the nematode-infected pine chips suffered more damage from the steam explosion treatment than the healthy pine chips. In addition, the total phenolic compound content showed a clear difference depending on the presence of infection and steam explosion conditions. The maximum total phenolic compound content of extracted ethanol was found when the nematode-infected pine chip was subjected to steam explosion with a severity factor (Ro) of 3.82. The steam exploded pine extract of 10 µg/mL inhibited glutamate-induced early apoptotic cell death compared to cells treated with 10 mM glutamate alone. These results suggested that steamexploded pine can be used as an effective natural material for neuronal cell protection. [ABSTRACT FROM AUTHOR]

Ultraviolet B (UVB) irradiation causes photoaging, such as wrinkles, roughness and dryness of the skin, and it activates the production of reactive oxygen species (ROS) and inflammatory cytokines. In this study, the anti-photoaging activity of SEP-E (steam-exploded pine extract) was evaluated in HaCaT keratinocytes damaged by UVB irradiation. SEP-E treatment showed cytoprotective effects in HaCaT keratinocytes irradiated with UVB (40 mJ/cm²). SEP-E treatment reduced ROS overproduction and promoted the expression of antioxidant enzymes, such as catalase, superoxide dismutase 1, and superoxide dismutase 2. Additionally, SEPE treatment suppressed the expression of inflammatory cytokines, including interleukin 6, interleukin 8, and monocyte chemoattractant protein-1. Consequently, SEP-E shows potential as a natural material for photoaging treatment. [ABSTRACT FROM AUTHOR]

Wood decay fungi alter the abiotic and biotic properties of deadwood, which are important as nurse logs for seedling regeneration. However, the relationship between fungal decay type and seedling performance has not been evaluated experimentally. In this study, we examined the germination, growth, and survival of six arbuscular mycorrhizal (AM) and six ectomycorrhizal (ECM) tree species on three substrates (pine logs with brown and white rot and soil) by conducting seed‐sowing experiments in a mixed forest dominated by Pinus densiflora and Quercus serrata. Analysis using ribosomal DNA internal transcribed spacer 1 (rDNA ITS1) sequencing revealed that the fungal community was significantly different across three substrates. The richness of operational taxonomic units (OTUs) of AM and ECM fungi was the largest on brown rot logs and soil, respectively. The substrate significantly affected the seedling performance when comparing wood decay types, but these were not consistent across the mycorrhizal status of the seedlings. Nevertheless, seedlings of some AM trees showed better growth and enhanced mycorrhizal colonization on brown rot logs than on white rot logs. The wood decay type influenced fungal communities in the logs and the performance of some seedling species partly by different mycorrhizal colonization rates. However, the effect was seedling species dependent and showed no apparent difference between AM and ECM trees. [ABSTRACT FROM AUTHOR]

Naegleria fowleri invades the brain and causes a fatal primary amoebic meningoencephalitis (PAM). Despite its high mortality rate of approximately 97%, an effective therapeutic drug for PAM has not been developed. Approaches with miltefosine, amphotericin B, and other antimicrobials have been clinically attempted to treat PAM, but their therapeutic efficacy remains unclear. The development of an effective and safe therapeutic drug for PAM is urgently needed. In this study, we investigated the anti-amoebic activity of Pinus densiflora leaf extract (PLE) against N. fowleri. PLE induced significant morphological changes in N. fowleri trophozoites, resulting in the death of the amoeba. The IC50 of PLE on N. fowleri was 62.3±0.95 µg/ml. Alternatively, PLE did not significantly affect the viability of the rat glial cell line C6. Transcriptome analysis revealed differentially expressed genes (DEGs) between PLE-treated and non-treated amoebae. A total of 5,846 DEGs were identified, of which 2,189 were upregulated, and 3,657 were downregulated in the PLE-treated amoebae. The DEGs were categorized into biological process (1,742 genes), cellular component (1,237 genes), and molecular function (846 genes) based on the gene ontology analysis, indicating that PLE may have dramatically altered the biological and cellular functions of the amoeba and contributed to their death. These results suggest that PLE has anti-N. fowleri activity and may be considered as a potential candidate for the development of therapeutic drugs for PAM. It may also be used as a supplement compound to enhance the therapeutic efficacy of drugs currently used to treat PAM. [ABSTRACT FROM AUTHOR]

Abstract Wood decay fungi alter the abiotic and biotic properties of deadwood, which are important as nurse logs for seedling regeneration. However, the relationship between fungal decay type and seedling performance has not been evaluated experimentally. In this study, we examined the germination, growth, and survival of six arbuscular mycorrhizal (AM) and six ectomycorrhizal (ECM) tree species on three substrates (pine logs with brown and white rot and soil) by conducting seed‐sowing experiments in a mixed forest dominated by Pinus densiflora and Quercus serrata. Analysis using ribosomal DNA internal transcribed spacer 1 (rDNA ITS1) sequencing revealed that the fungal community was significantly different across three substrates. The richness of operational taxonomic units (OTUs) of AM and ECM fungi was the largest on brown rot logs and soil, respectively. The substrate significantly affected the seedling performance when comparing wood decay types, but these were not consistent across the mycorrhizal status of the seedlings. Nevertheless, seedlings of some AM trees showed better growth and enhanced mycorrhizal colonization on brown rot logs than on white rot logs. The wood decay type influenced fungal communities in the logs and the performance of some seedling species partly by different mycorrhizal colonization rates. However, the effect was seedling species dependent and showed no apparent difference between AM and ECM trees.

The succession process in terms of species composition and stand structure was directly tracked for 10 years in permanent plots of five Korean cool-temperate forests having different stand ages and topography: Pinus-Quercus forest (PQ), Quercus-Tilia forest (QT), Broadleaved-Abies mixed forest (BA), Populus-Salix forest (PS), and subalpine forest (SA). Although the 10-year change in mature forests was small, succession was detected by applying the pre-developed climax index. The species composition based on the climax index implied that PQ is at pioneer stage, QT and PS are at intermediate stage, while BA and SA are at the late-successional stage. The stems were regulated in a density-dependent manner; severer in forests such as PQ and QT with high initial densities, and severer in the dense mid-story than in the upper-story. Consequently, the basal area increased in the upper-story and decreased in the mid-story. As the abundance of species with higher climax index increased, succession exhibited a progressive direction. However, SA suffered chronic disturbances, and showed fluctuations. During the study, BA and PS were also damaged but they were resilient to site-related natural disturbances. Our findings through a 10-year permanent-plot study may have meaningful implications for explaining mature forest succession in other regions of Korea. [ABSTRACT FROM AUTHOR]

The antibacterial activity and mechanism of Pinus densiflora extracts against Escherichia coli and Staphylococcus aureus were investigated. The growth inhibition tests of paper diffusion and optical density exhibited that the extracts have potent antibacterial potentials against foodborne pathogens. The measurement of membrane fluidity by fluorescence polarization has indicated that one of the antibacterial mechanisms involves the disruption of membrane integrity resulting in an increase in the membrane fluidity in both of E. coli and S. aureus. The alteration of fatty acid composition was accompanied by the disturbance of membranes thus shifting the proportion of saturated verses unsaturated fatty acids or trans fatty acids from 1.27:1 to 1.35:1 in E. coli and 1.47:1 to 2.31:1 in S. aureus, most likely to compensate for the increased membrane fluidity by means of a higher proportion of saturated fatty acids which is known to render rigidity in membranes. Realtime q-PCR (polymerase chain reaction) analysis of fatty acid synthetic genes and bacterial stress genes revealed that there was minimal influence of P. densiflora extracts on fatty acid genes except for fab I and the stress rpos in E. coli, and relatively greater impact on fatty acid genes and the stress sigB in S. aureus. [ABSTRACT FROM AUTHOR]

There is growing interest in the diverse roles of forests in addressing climate change and biodiversity goals. Recent studies have indicated a disregard for the cultural values of forests that have been formed in close association with human activities. This may potentially lead to the loss of cultural characteristics, traditional forest knowledge, and biodiversity. This study explores historical forest dynamics and their unique cultural values from the end of the 19th century in 15 shrine/temple forests located in the mountainous and foothill areas of Kyoto city. Using geographical information systems (GIS) based on topographic maps and aerial photographs, this study investigates the forest composition in the 1890s, 1980s, and from 2010. The results indicate that approximately half of the targeted shrine/temple forests were composed of low Pinus densiflora forests and coppice forests in the 1890s. Between the 1890s and 1910s, coniferous forests were planted in these areas with the intention of land conservation and timber production. This distinctive forest cover became a typical characteristic for shrine/temple forests until the 1980s. However, from the 1980s, a decrease in the cultural value of shrine/temple forests was observed due to the lack of human activities in these forests. As a result, the distinction between shrine/temple forests and the surrounding forests has become blurred. This could potentially cause the homogenization of cultural characteristics. This study aims to inform readers of the cultural value associated with the historical landscape and biodiversity found in shrine/temple forests. [ABSTRACT FROM AUTHOR]

The Korean mountains are home to the Korean red pine (Pinus densiflora). Pine needle oil has been used as a food additive and a traditional herbal medicine; however, any health-related properties of its trunk oil remain unknown. Herein, we assessed antibacterial and antiviral properties of essential oil extracted from the trunk of P. densiflora. Th extracted oil was hydrodistilled using a Clevenger apparatus and analyzed using gas chromatography–mass spectrometry. The antimicrobial activity of the oil was tested using the microbroth dilution technique against 10 bacterial species (6 g-positive and 4 g-negative) and fungi. The extract exerted strong antimicrobial activity against Vibrio parahaemolyticus, Bacillus cereus, Listeria monocytogenes, Propionibacterium acnes, and Malassezia furfur (minimum inhibitory concentration = 10 mL/L). Additionally, it exhibited dose-dependent activity against influenza virus A and feline coronavirus. Furthermore, among 20 identified constituents accounting for 98.7% of the oil contents, the major components included 3-cyclohexene-1-methanol (10.12%), 2-(4-methylcyclohexyl)-2-propanol (9.09%), fenchone (8.14%), O-isopropyltoluene (6.35%), and isothymol methyl ether (6.14%). The P. densiflora trunk essential oil showed antibacterial and antiviral activities that depended on its chemical composition and the microbial strains tested herein. The essential oil can be used as an antimicrobial agent and disinfectant. [ABSTRACT FROM AUTHOR]

The effect of invertebrates like termites and beetle larvae on dead wood could be time-dependent due to changes in wood traits and invertebrate species composition over time. This study assessed changes in the impact of termites and beetle larvae on dead wood decomposition in two tree species, Pinus densiflora and Quercus acutissima, in South Korea over a 6-year period (2016–2022). Wood samples were prepared, with half of them encased in a stainless-steel mesh to prevent access by invertebrates larger than 0.26 mm. These samples were placed in three regions representative of different environments in South Korea (southern, eastern, and western). Significant variations in the mass loss of dead wood were observed based on the tree species, region, and time (p < 0.05). The mean standardized invertebrate effect, assessed with Hedges’ d and a 95% confidence interval, was 0.83 ± 2.19 for P. densiflora and 1.08 ± 2.26 for Q. acutissima. Termites were found in the southern and western regions, with the highest invertebrate effect after two years. Our results indicate that the influence of invertebrates, especially termites, on dead wood decomposition could be most significant during the initial decomposition stages, as noted in the southern region of this research.

Trees in degraded forest areas are generally exposed to water stress due to harsh environmental conditions, threatening their survival. This study simulated the environmental conditions of a degraded forest area by constructing an artificial rainfall slope and observing the physiological responses of Pinus densiflora to control, mulching, and waterbag treatments. P. densiflora exhibited distinct isohydric plant characteristics of reducing net photosynthetic rate and stomatal transpiration rate through regulating stomatal conductance in response to decreased soil moisture, particularly in the control and waterbag treatments. Additionally, the trees increased photochemical quenching, such as Y(NPQ), to dissipate excess energy as heat and minimize damage to the photosynthetic apparatus. However, these adaptive mechanisms have temporal limitations, necessitating appropriate measures. Under extreme drought stress (DS45), mulching treatment showed 4.5 times and 2.2 times higher in PIabs and SFIabs than in the control, and after the recovery period (R30), waterbag and mulching treatment showed similar levels, while PIabs and SFIabs in the control were only 45% and 75% of those in the mulching and waterbag treatments, respectively. Specifically, mulching extended the physiological mechanisms supporting survival by more than a week, making it the most effective method for enhancing the planting ground in degraded forest areas. Although the waterbag treatment was less effective than mulching treatment, it still significantly contributed to forming better growth conditions compared to the control. These findings highlight the potential for mulching and waterbag treatments to enhance forest restoration efforts, suggesting future research and application could lead to more resilient reforested areas capable of withstanding climate change-induced drought conditions.

AbstractThe importance of a quantitative assessment of C and N contents of dead wood is increasing in forest ecosystems. This study aimed to determine the density and carbon (C) and nitrogen (N) status of dead wood with decay class for three pine species (Pinus densiflora, Pinus rigida, and Pinus koraiensis) in southern Korea. The C concentration in dead wood was significantly different among species (P. densiflora, 50.31%; P. koraiensis, 47.22%; P. rigida, 44.96%), whereas decay class did not affect the C concentration (p > 0.05). The density and C content of dead wood in all species decreased with increasing decay class. The N concentrations of dead wood increased more rapidly in P. rigida and P. koraiensis than in P. densiflora, with an increasing decay class. Thus, the N content of dead wood was unchanged or increased in P. rigida and P. koraiensis, whereas that of P. densiflora decreased because of density reduction with increasing decay class. Our results indicate that the unchanged, increased, or decreased status of C and N in dead wood depends on the species and decay class.

Trees can serve as effective biofilters of Particulate matter (PM) pollution, making them valuable for managing air pollution and promoting public health. Leaves of trees can reduce PM through absorption, adsorption, and fallout mechanisms, which are influenced by species-specific characteristics and environmental factors. Although several studies have explored the impact of various leaf characteristics on their ability to adsorb PM from field conditions, few have been conducted in controlled chambers to analyze the adsorption of PM on leaf surfaces and the uptake of metal and non-metal elements from PM on leaves. To fill these knowledge gaps, this study investigated the PM adsorption and leaf characteristics of two different tree species, Pinus densiflora (an evergreen coniferous species) and Quercus acutissima (a deciduous broad-leaved species) under controlled conditions in a PM exposure chamber with a target concentration of 300 μg m−3. The main aim of this study was to measure and compare the rate of PM component (metal and non-metal elements) uptake in two species and investigate the leaf characteristics that contribute to PM adsorption. We investigated the relationship between PM adsorption and physiolog, micro-morphology, and chemical properties of the leaf surface in two species. This study used a Pearson’s correlation analysis and a principal component analysis (PCA) to evaluate correlation between PM adsorption and leaf characteristics and uptake of metal/non-metal elements in PM on leaves. This result showed that leaf characteristics such as stomatal size, leaf roughness, and wax content played a crucial role in PM10 adsorption, while physiological factors like transpiration and leaf boundary layer conductance were identified as important determinants of PM2.5 adsorption on plant leaves. It also observed significant variations in the uptake of aluminum, iron, magnesium, phosphorus, and sulfur. This study not only advances our understanding of the mechanisms behind PM adsorption by tree leaves but also underscores the importance of selecting appropriate tree species based on their leaf characteristics for urban forestry and green infrastructure projects. The ability to strategically use tree species for PM pollution mitigation highlights a practical approach to enhancing environmental sustainability and public health.

Summary: Bursaphelenchus xylophilus causes pine wilt disease and is transmitted to host trees by cerambycid adults of the genus Monochamus. There are two primary transmission pathways: via vector feeding wounds to healthy trees and via the oviposition wounds to dying or recently dead trees. To determine the ratio of nematodes transmitted via the different pathways, M. alternatus female adults were reared on Pinus densiflora fresh twig sections and wood pieces with the bark made favourable for oviposition. Transmission curves of B. xylophilus to twig sections were similar in shape to the nematode departure curves for each vector, whereas the transmission curves to wood pieces were dissimilar to the departure curves because of different age classes at the peak between the curves. Consequently, there was no similarity in shape between two transmission curves to twig sections and wood pieces. Of B. xylophilus transmitted to twig sections and wood pieces after vectors constructed the first oviposition wound, 38.7% was transmitted to twig sections and 61.3% to wood pieces. Using the results of present and previous studies, GLM analysis indicated that the probability of B. xylophilus transmission to twig sections was 0.481 and that B. xylophilus had a 9.7 times higher likelihood of feeding-related transmission to oviposition-related transmission than non-pathogenic B. mucronatus. Thus, the reproductively mature vectors are considered to be related to the incidence of pine wilt disease and dispersal studies on mature vectors would help to predict the expansion rate of areas affected by the disease in the current year. [ABSTRACT FROM AUTHOR]

Wood is the most important renewable resource not only for numerous practical utilizations but also for mitigating the global climate crisis by sequestering atmospheric carbon dioxide. The compressed wood (CW) of gymnosperms, such as conifers, plays a pivotal role in determining the structure of the tree through the reorientation of stems displaced by environmental forces and is characterized by a high content of lignin. Despite extensive studies on many genes involved in wood formation, the molecular mechanisms underlying seasonal and, particularly, CW formation remain unclear. This study examined the seasonal dynamics of two wood tissue types in Pinus densiflora: CW and opposite wood (OW). RNA sequencing of developing xylem for two consecutive years revealed comprehensive transcriptome changes and unique differences in CW and OW across seasons. During growth periods, such as spring and summer, we identified 2255 transcripts with differential expression in CW, with an upregulation in lignin biosynthesis genes and significant downregulation in stress response genes. Notably, among the laccases critical for monolignol polymerization, PdeLAC17 was found to be specifically expressed in CW, suggesting its vital role in CW formation. PdeERF4, an ERF transcription factor preferentially expressed in CW, seems to regulate PdeLAC17 activity. This research provides an initial insight into the transcriptional regulation of seasonal CW development in P. densiflora, forming a foundation for future studies to enhance our comprehension of wood formation in gymnosperms. [ABSTRACT FROM AUTHOR]

We aimed to tackle a common problem in post-fire tree mortality where the number of trees that survived surpasses the number of dead trees. Here, we investigated the factors that affect Korean red pine (Pinus densiflora Siebold & Zucc.) tree mortality following fires and assessed the statistical effects of class-balancing methods when fitting logistic regression models for predicting tree mortality using empirical bootstrapping (B = 100,000). We found that Slope, Aspect, Height, and Crown Ratio potentially impacted tree mortality, whereas the bark scorch index (BSI) and diameter at breast height (DBH) significantly affected tree mortality when fitting a logistic regression with the original dataset. The same variables included in the fitted logistic regression model were observed using the class-balancing regimes. Unlike the imbalanced scenario, lower variabilities of the estimated parameters in the logistic models were found in balanced data. In addition, class-balancing scenarios increased the prediction capabilities, showing reduced root mean squared error (RMSE) and improved model accuracy. However, we observed various levels of effectiveness of the class-balancing scenarios on our post-fire tree mortality data. We still suggest a thorough investigation of the minority class, but class-balancing scenarios, especially oversampling strategies, are appropriate for developing parsimonious models to predict tree mortality following fires. [ABSTRACT FROM AUTHOR]

The bioactive compound, which showed a potent nitric oxide production stimulation effect, was isolated from Japanese red pine tea and identified as (+)-catechin. Compared with (−)-epigallocatechin 3-O-gallate and (−)-catechin, (+)-catechin exhibited greater NO production promotion and protection from H2O2-induced oxidative stress in vascular endothelial cells. The (+)-catechin content of Japanese red pine tea was found to be higher than that of buckwheat or green tea, both of which are known to contain (+)-catechin. This study indicated that (+)-catechin could be used as a potential functional ingredient for endothelium function protection and provides a basis for the use of red pine tea in endothelium dysfunction prevention in the future.

In flowering plants, FLOWERING LOCUS T (FT) and TERMINAL FLOWER 1 (TFL1), members of the phosphatidylethanolamine-binding protein (PEBP) family, are key players in flowering control with antagonistic functions: FT promotes flowering, while TFL1 represses it. Here, we report the functional characterization of FT/TFL1-like (FTL) genes from Pinus densiflora (PdeFTL1 and PdeFTL2). Sequence analysis showed that both PdeFTL1 and PdeFTL2 had a conserved PEBP domain with several specific amino acid residues characteristic of TFL1 function, including Serine (S) at position 137, which is Tryptophan (W) in FT function. We generated a chimeric gene of PdeFTL1_S137W and tested its floral regulatory function by heterologous expression in tobacco and Arabidopsis. Our results showed that tobacco plants transiently expressing PdeFTL1_S137W significantly accelerate flowering time. Likewise, transgenic Arabidopsis overexpressing PdeFTL1_S137W produced flower buds at a very immature stage with only 3–5 true leaves, similar to 35S::AtFT plants. However, 35S::PdeFTL1 plants showed a mild delay in flowering compared to the control. Collectively, our molecular evolution study successfully demonstrated that substituting only one amino acid of the PdeFTL1 protein could completely change the biochemical activity of this protein to a floral activator. Therefore, this strategy can be utilized as a basis to modulate flowering time in conifers. [ABSTRACT FROM AUTHOR]

Tracheary elements (i.e. vessel elements and tracheids) are highly specialized, non-living cells present in the water-conducting xylem tissue. In angiosperms, proteins in the VASCULAR-RELATED NAC-DOMAIN (VND) subgroup of the NAC (NAM, ATAF1,2, and CUC2) transcription factor family (e.g. AtVND6) are required for the differentiation of vessel elements through transcriptional regulation of genes responsible for secondary cell wall formation and programmed cell death. Gymnosperms, however, produce only tracheids, the mechanism of which remains elusive. Here, we report functional characteristics of PdeNAC2, a VND homolog in Pinus densiflora , as a key regulator of tracheid formation. Interestingly, our molecular genetic analyses show that PdeNAC2 can induce the formation of vessel element-like cells in angiosperm plants, demonstrated by transgenic overexpression of either native or NAC domain-swapped synthetic genes of PdeNAC2 and AtVND6 in both Arabidopsis and hybrid poplar. Subsequently, genome-wide identification of direct target (DT) genes of PdeNAC2 and AtVND6 revealed 138 and 174 genes as putative DTs, respectively, but only 17 genes were identified as common DTs. Further analyses have found that PdeNAC2 does not control some AtVND6-dependent vessel differentiation genes in angiosperm plants, such as AtVRLK1, LBD15/30 and pit-forming Rho-like GTPases from plant (ROP) signaling genes. Collectively, our results suggest that different target gene repertoires of PdeNAC2 and AtVND6 may contribute to the evolution of tracheary elements. [ABSTRACT FROM AUTHOR]

The correlation between climate change and pine tree dieback must be understood to implement a proactive forest management system. In this study, an ensemble model combining random forest, the generalized boosting model, and the generalized linear model was used to analyze the topographical and environmental characteristics of pine trees suffering from dieback in the Wangpicheon Ecosystem and Landscape Conservation Area, and the areas in which pine trees are at risk of dieback were evaluated to promote efficient pine forest management. The results showed that pine trees suffering from dieback in the conservation area were mainly located on ridges, were age class 6 or older, or were in areas with a low topographic wetness index south of the conservation area. An evaluation of the risk of dieback among pine trees was performed based on the results of two ensemble models. An area of 365 ha accounting for 6.8% of the total area was identified as requiring "caution" with respect to the risk of dieback of coniferous forests and mixed forests. The developed methodology is expected to provide valuable information for the implementation of an appropriate management system for the protection of pine and mixed forests from the negative effects of climate change. [ABSTRACT FROM AUTHOR]

The antibacterial activity and mechanism of Pinus densiflora extracts against Escherichia coli and Staphylococcus aureus were investigated. The growth inhibition tests of paper diffusion and optical density exhibited that the extracts have potent antibacterial potentials against foodborne pathogens. The measurement of membrane fluidity by fluorescence polarization has indicated that one of the antibacterial mechanisms involves the disruption of membrane integrity resulting in an increase in the membrane fluidity in both of E. coli and S. aureus. The alteration of fatty acid composition was accompanied by the disturbance of membranes thus shifting the proportion of saturated verses unsaturated fatty acids or trans fatty acids from 1.27:1 to 1.35:1 in E. coli and 1.47:1 to 2.31:1 in S. aureus, most likely to compensate for the increased membrane fluidity by means of a higher proportion of saturated fatty acids which is known to render rigidity in membranes. Realtime q-PCR (polymerase chain reaction) analysis of fatty acid synthetic genes and bacterial stress genes revealed that there was minimal influence of P. densiflora extracts on fatty acid genes except for fab I and the stress rpos in E. coli, and relatively greater impact on fatty acid genes and the stress sigB in S. aureus.

The East Coast Fire in April 2000 was a recorded large-scale fire in Korea (23,794 ha) which caused a fierce debate over mandatory reforestation policy. The regeneration process of tree species at the stand and species level was tracked for 20 years by permanent plots according to burn severity and degree of initial regeneration in prefire Pinus densiflora forests. Fire activated sprouting vigorously in the first two years, forming single-cohort tree clump populations. The abundance of prefire resprouter trees and burn severity greatly influenced the process. The high survival and fast growth of the initial clumps contributed to the stand development. Quercus mongolica was dominated with large clump size initially, while Quercus variabilis increased the dominance with a faster growth rate over time. Pinus densiflora, obligate seeder, was established from about 8 years later only in the low-regenerating stands. After 20 years, the canopy of the prefire pine forests shifted and diverged to three types. Pinus stand was maintained at light-burn stands, while Quercus-dominated or Pinus–Quercus mixed stand was formed at severe-burn stands. The qualitative and quantitative characteristics of initial stands mostly persisted in stands for 20 years, suggesting a good predictor for the structural development of later stands. This provide good information for establishing a restoration policy in the early stage after fire. [ABSTRACT FROM AUTHOR]

Physiological response and transcriptome changes were observed to investigate the effects on the growth, metabolism and genetic changes of Pinus densiflora grown for a long time in an environment with an elevated atmospheric CO2 concentration. Pine trees were grown at ambient (400 ppm) and elevated (560 ppm and 720 ppm) CO2 concentrations for 10 years in open-top chambers. The content of nonstructural carbohydrates was significantly increased in elevated CO2. It was notable that the contents of chlorophylls significantly decreased at an elevated CO2. The activities of antioxidants were significantly increased at an elevated CO2 concentration of 720 ppm. We analyzed the differences in the transcriptomes of Pinus densiflora at ambient and elevated CO2 concentrations and elucidated the functions of the differentially expressed genes (DEGs). RNA-Seq analysis identified 2415 and 4462 DEGs between an ambient and elevated CO2 concentrations of 560 ppm and 720 ppm, respectively. Genes related to glycolysis/gluconeogenesis and starch/sucrose metabolism were unchanged or decreased at an elevated CO2 concentration of 560 ppm and tended to increase at an elevated CO2 concentration of 720 ppm. It was confirmed that the expression levels of genes related to photosynthesis and antioxidants were increased at an elevated CO2 concentration of 720 ppm. [ABSTRACT FROM AUTHOR]

The study of population genetic structure and historical dynamics of species with disjunct distribution can reveal the mechanisms through with they were formed. Pinus densiflora is an essential tree species with ecological and economic value, and its natural distribution shows a disjunct pattern. Using transcriptome-level SNP data from 220 samples representing 32 naturally-distributed populations in East Asia, we investigated Pinus densiflora genetic diversity and structure, divergence time, and ancestral distribution. We identified five subpopulations which diverged approximately 2.02–1.49 million years ago, and found relatively low genetic differentiation among the three large subpopulations (SL, JH, and JK). Northeast China is the most likely origin, and its current distribution is the result of dispersal and vicariance events. It migrated southwest through the Liaodong Peninsula to the Shandong Peninsula and southeast through the Korean Peninsula to Japan. These results provide a basis for the conservation and management of P. densiflora in the future and the evolutionary study of species with similar life histories. [ABSTRACT FROM AUTHOR]

There is growing interest in the diverse roles of forests in addressing climate change and biodiversity goals. Recent studies have indicated a disregard for the cultural values of forests that have been formed in close association with human activities. This may potentially lead to the loss of cultural characteristics, traditional forest knowledge, and biodiversity. This study explores historical forest dynamics and their unique cultural values from the end of the 19th century in 15 shrine/temple forests located in the mountainous and foothill areas of Kyoto city. Using geographical information systems (GIS) based on topographic maps and aerial photographs, this study investigates the forest composition in the 1890s, 1980s, and from 2010. The results indicate that approximately half of the targeted shrine/temple forests were composed of low Pinus densiflora forests and coppice forests in the 1890s. Between the 1890s and 1910s, coniferous forests were planted in these areas with the intention of land conservation and timber production. This distinctive forest cover became a typical characteristic for shrine/temple forests until the 1980s. However, from the 1980s, a decrease in the cultural value of shrine/temple forests was observed due to the lack of human activities in these forests. As a result, the distinction between shrine/temple forests and the surrounding forests has become blurred. This could potentially cause the homogenization of cultural characteristics. This study aims to inform readers of the cultural value associated with the historical landscape and biodiversity found in shrine/temple forests.

The Korean mountains are home to the Korean red pine (Pinus densiflora). Pine needle oil has been used as a food additive and a traditional herbal medicine; however, any health-related properties of its trunk oil remain unknown. Herein, we assessed antibacterial and antiviral properties of essential oil extracted from the trunk of P. densiflora. Th extracted oil was hydrodistilled using a Clevenger apparatus and analyzed using gas chromatography–mass spectrometry. The antimicrobial activity of the oil was tested using the microbroth dilution technique against 10 bacterial species (6 g-positive and 4 g-negative) and fungi. The extract exerted strong antimicrobial activity against Vibrio parahaemolyticus, Bacillus cereus, Listeria monocytogenes, Propionibacterium acnes, and Malassezia furfur (minimum inhibitory concentration = 10 mL/L). Additionally, it exhibited dose-dependent activity against influenza virus A and feline coronavirus. Furthermore, among 20 identified constituents accounting for 98.7% of the oil contents, the major components included 3-cyclohexene-1-methanol (10.12%), 2-(4-methylcyclohexyl)-2-propanol (9.09%), fenchone (8.14%), O-isopropyltoluene (6.35%), and isothymol methyl ether (6.14%). The P. densiflora trunk essential oil showed antibacterial and antiviral activities that depended on its chemical composition and the microbial strains tested herein. The essential oil can be used as an antimicrobial agent and disinfectant.

ABSTRACT: Three different medicinal plants that consisted of the formulated mixture (CAVAC-1901) have been traditionally used for distinct medicinal purposes in different areas. Angelica dahurica has been used as an important ingredient of a prescription, Gumiganghwal-tang, for the common cold and influenza. Curcuma longa has been utilized for the treatment of asthma, and jaundice. Pinus densiflora (Korean red pine) has been used to improve memory and brain function for the treatment of vascular. Industrial livestock, which are characterized by dense breeding, are vulnerable to influenza infection, causing severe economic loss and social problems. However, there are no viable alternatives due to the risk of the occurrence of variants. Therefore, the aim of this study was to discover anti-influenza combinations of different medicinal plants with the concept of a multicomponent and multitarget (MCMT) strategy in traditional Chinese medicine (TCM). As part of a continuous project, 3 medicinal plants whose inhibitory activity against influenza A was previously reported at the compound level, and the inhibition of cytopathic effects (CPEs) by these formulated mixtures was evaluated against influenza A virus H1N1. A selected combination with an optimal ratio exhibiting synergistic activity was assessed for its antiviral activity in chickens against the highly pathogenic avian influenza (HPAI) H5N6. The selected combination (CAVAC-1901) showed potent inhibitory effects on the expression of neuraminidase and nucleoprotein, by RT-qPCR, Western blot, and immunofluorescence assays. The antiviral activity was more evident in chickens infected with H5N6. The sample-treated group (50 mg/kg/d) decreased mortality and virus titers in various organs. Our results indirectly suggest synergistic inhibitory activity of the combination of 3 different medicinal plants with different modes of action. Taken together, an optimally formulated mixture (CAVAC-1901) could serve as an effective alternative to current measures to minimize damage caused by HPAIs.

Forests have the largest terrestrial nutrient pools. The loss of soil carbon and nitrogen in forests under ongoing climate warming is subject to severe environmental degradation. To mitigate the negative effects of global warming on soil carbon and nitrogen in forest, it is important to obtain a better understanding of how elevated temperature and altered precipitation variability impact soil nutrient dynamics. To explore such interactions, we coupled an eco-hydrological model (Multi-Layer Canopy model, MLCan) with a biogeochemical model and applied the combined model to Pinus densiflora forest in Gwangneung Experimental Forest, South Korea, from 2004 to 2020. Our results showed that there was a time lag of 4 years to trigger soil organic carbon losses under the elevated temperature of +1.11°C during 2014–2020 compared to 2010–2013. A temperature rise over a prolonged period increased microbial biomass and activity, stimulating soil organic carbon decomposition. The combination of soil nitrate accumulation and exceptional but expected delay in heavy precipitation seasons of 2 months led to nitrate leaching four times higher than the average at 1 m depth in 2010. Reduced evapotranspiration and heavy precipitation during early fall caused intense subsurface water flux, resulting in a great increase in the risk of nitrate leaching. Our results highlight that the impacts of global warming on soil carbon decompositions has a time lag of 4 years and changes in precipitation characteristics will lead to excessive nitrate loss in P. densiflora forests under climate change.

Ectomycorrhizal fungi (EMF) form symbiotic relationship with the roots of host plants. EMF communities are composed of highly diverse species; however, how they are assembled has been a long-standing question. In this study, we investigated from a phylogenetic perspective how EMF communities assemble on Pinus densiflora seedlings at different spatial scales (i.e., seedling scale and root tip scale). P. densiflora seedlings were collected from different habitats (i.e., disturbed areas and mature forests), and their EMF communities were investigated by morphotype sequencing and next-generation sequencing (NGS). To infer assembly mechanisms, phylogenetic relatedness within the community (i.e., phylogenetic structure) was estimated and spatial distribution of EMF root tips was analyzed. The EMF communities on pine seedlings were largely different between the two habitats. Phylogenetically restricted lineages (Amphinema, /suillus–rhizopogon) were abundant in the disturbed areas, whereas species from diverse lineages were abundant in the mature forests (Russula, Sebacina, /tomentella–thelephora, etc.). In the disturbed areas, phylogenetically similar EMF species were aggregated at the seedling scale, suggesting that disturbance acts as a powerful abiotic filter. However, phylogenetically similar species were spatially segregated from each other at the root tip scale, indicating limiting similarity. In the mature forest seedlings, no distinct phylogenetic signals were detected at both seedling and root tip scale. Collectively, our results suggest that limiting similarity may be an important assembly mechanism at the root tip scale and that assembly mechanisms can vary across habitats and spatial scales. [ABSTRACT FROM AUTHOR]

Many ectomycorrhizal (ECM) fungi produce commercially valuable edible sporocarps. However, the effects of nitrogen (N) application on ECM fungal sporocarp formation remain poorly understood. In this study, we investigated the effect of application of various N concentrations (0, 5, 25, 50, 100, and 200 mg/L) on the growth of Laccaria japonica mycelia in vitro for 1 month. The results showed that L. japonica mycelial biomass was highest in the 50 mg/L treatment and was significantly inhibited at N concentrations higher than 200 mg/L. Next, we investigated the effects of N application on mycorrhizal colonization and sporocarp formation in L. japonica colonizing Pinus densiflora seedlings in pots. The seedlings were watered with nutrient solutions containing 0, 5, 25, 50, or 100 mg N/L. The biomass, photosynthetic rate, and mycorrhizal colonization rates of the seedlings were measured at 45 days (first appearance of primordia), 65 days (sporocarp appearance on the substrate surface), and 4 months after seedlings were transplanted. The numbers of primordia and sporocarps were recorded during the experimental period. Total carbon (C) and N content were determined in seedlings at 4 months after transplantation, and in L. japonica sporocarps. Both mycelial growth and sporocarp production reached their maximum at an N application concentration of 50 mg/L, suggesting that the most suitable N concentration for ECM fungal sporocarp formation can easily be estimated in vitro during mycelial growth. This finding may help determine the most suitable N conditions for increasing edible ECM fungus sporocarp production in natural forests. [ABSTRACT FROM AUTHOR]

This paper proposes a non-contact, online, rapid, and non-destructive measurement method of Pinus densiflora S.et Z. (Pinus densiflora) dimension lumber based on an algorithm of maximizing lumber recovery by minimizing the enclosure rectangle fitting area. The method takes the full influence of multiple factors, such as the difficulty in measuring large-size dimension lumber, conveying deflection, etc. into account. Image splicing, object and background segmentation, and lumber size measurements are carried out. Compared to other current algorithms, it can decrease the measurement errors and improve measurement efficiency. The problems of slow image segmentation, large-size lumber measurement, and conveying deflection are solved. Through measurement tests and error analysis, the measurement accuracy of the lumber size can reach 0.8 mm/m. This method meets the requirements of high-speed lumber production and lays the foundation for the development of a lumber detection and evaluation system. [ABSTRACT FROM AUTHOR]

A prediction model was developed for the wildfire fuel load of Korean red pine (Pinus densiflora) stands with susceptibility to forest fire based on the forest-growth model. Furthermore, a time-series analysis was performed on the variation in forest-fire fuel load according to forest management. National Forest Inventory stand data of 1434 plots for P. densiflora stands were used, and the final forest-fire fuel load prediction model was developed using the Weibull function and mortality model. The fit index of the diameter distribution model ranged from 0.58 (0th percentile) to 0.96 (50th percentile), and that of the mortality model was 0.68. The prediction of the stand growth variation after 20 years based on the growth data of managed and unmanaged stands indicated a mean stand density of 1518 trees per ha for unmanaged stands, and 885 trees per ha for managed stands. Regarding the variation in the available canopy fuel load distribution, the predicted annual increase was approximately 0.7 ton/ha for unmanaged stands and approximately 0.5 ton/ha for managed stands. These findings will contribute to setting fuel management criteria to prevent forest fire spread while providing the quantitative data of the characteristics of stand growth variation and the predicted wildfire fuel load. [ABSTRACT FROM AUTHOR]

Changes in stand biomass, stem density, mortality and recruitment were monitored from 2000 to 2016 at 5- or 6-year intervals of Mt. Geumsan (GMS). The GMS had 34 woody plant species and 2698 living stems (DBH ≥ 2 cm) ha−1 in 2016, with an increase in biomass from 233.80 ton ha−1 in 2000 to 282.15 ton ha−1 in 2016. The dominant species in the canopy layer was Quercus serrata, while Chamaecyparis obtusa was the dominant species in the subtree layer. During the 17 years, the biomass of Q. serrata increased from 156.35 to 198.40 ton ha−1, while the stem density of Q. serrata declined from 395 to 268 stems ha−1. In addition, the biomass of C. obtusa increased from 12.70 to 24.09 ton ha−1, and also the stem density of C. obtusa increased from 722 to 898 stems ha−1. The forest structure of GMS is expected to maintain dominance of Q. serrata, and C. obtusa is increasing. Therefore, GMS was a natural broad-leaved forest composed of Q. serrata, but natural broad-leaved species at the site are declining due to the regeneration and growth of C. obtusa, which is relatively shade-tolerant compared to other species.

The genus Laccaria (Hydnangiaceae, Agaricales) plays an important role in forest ecosystems as an ectomycorrhizal fungus, contributing to nutrient cycles through symbiosis with many types of trees. Though understanding Laccaria diversity and distribution patterns, as well as its association with host plants, is fundamental to constructing a balanced plant diversity and conducting effective forest management, previous studies have not been effective in accurately investigating, as they relied heavily on specimen collection alone. To investigate the true diversity and distribution pattern of Laccaria species and determine their host types, we used four different approaches: specimen-based analysis, open database search (ODS), NGS analysis, and species-specific PCR (SSP). As a result, 14 Laccaria species have been confirmed in Korea. Results regarding the species distribution pattern were different between specimen-based analysis and SSP. However, when both were integrated, the exact distribution pattern of each Laccaria species was determined. In addition, the SSP revealed that many Laccaria species have a wide range of host types. This study shows that using these four different approaches is useful in determining the diversity, distribution, and host of ECM fungi. Furthermore, results obtained for Laccaria will serve as a baseline to help understand the role of ECM fungi in forest management in response to climate change.

Abstract The aim of this study is to identify the active compounds of the essential oil extracted from the Pinus densiflora (Sieb. et Zucc.) wood using the hydrodistillation method and evaluate their anti-inflammatory activity. The chemical composition of the oil was identified by GC–MS analysis, and its anti-inflammatory activity was assessed by investigating its effect on the expression of interleukin-4 (IL-4), interleukin-13 (IL-13), and β-hexosaminidase in lipopolysaccharide (LPS)-stimulated RBL-2H3 cells. Treatment of the LPS-stimulated RBL-2H3 cells with the oil and its fractions downregulated the production of pro-inflammatory cytokines such as IL-4 and IL-13 and further attenuated the secretion of β-hexosaminidase out of the cells to a significant level. Among the five obtained fractions, fraction E exhibited the best anti-inflammatory activity, and its main constituent, longifolene, was considered as the active compound. Moreover, the inhibitory effect of longifolene on the expression levels of IL-4 and IL-13 and the β-hexosaminidase secretion was similar to that of the P. densiflora wood oil, indicating longifolene as the active constituent of the P. densiflora wood oil with immunosuppressive effects on inflammation.

The correlation between climate change and pine tree dieback must be understood to implement a proactive forest management system. In this study, an ensemble model combining random forest, the generalized boosting model, and the generalized linear model was used to analyze the topographical and environmental characteristics of pine trees suffering from dieback in the Wangpicheon Ecosystem and Landscape Conservation Area, and the areas in which pine trees are at risk of dieback were evaluated to promote efficient pine forest management. The results showed that pine trees suffering from dieback in the conservation area were mainly located on ridges, were age class 6 or older, or were in areas with a low topographic wetness index south of the conservation area. An evaluation of the risk of dieback among pine trees was performed based on the results of two ensemble models. An area of 365 ha accounting for 6.8% of the total area was identified as requiring “caution” with respect to the risk of dieback of coniferous forests and mixed forests. The developed methodology is expected to provide valuable information for the implementation of an appropriate management system for the protection of pine and mixed forests from the negative effects of climate change.

With allelopathic composts, potential merits for preventing initial weed infestations have been observed in crop transplantation. However, previous studies have rarely investigated whether high temperatures, generated during composting, decrease allelopathic ability. This study evaluated the thermal allelopathic effect of two coniferous plants (Pinus densiflora and P. koraiensis) on Brassica napus germination and seedling growth using their characterized allelochemical destinations. The 90 °C dry treatment of P. densiflora extract exhibited stronger inhibitory effect on germination than its 30 °C dry treatment. In a range from 0.25 to 1 mg mL−1, the germination rate was decreased to 38.1 and 64.3% of control with P. densiflora extract dried at 90 and 30 °C, respectively. However, P. koraiensis showed potent inhibition of the germination process with no statistical difference in inhibitory effects regardless of the dry temperature. Regarding B. napus seedling root growth, the allelopathic effects of aqueous extracts of both conifers were not reduced with the 90 °C treatment, but it was lost in seedling shoot growth. GC-MS/MS confirmed that high temperature treatment drastically decreased volatile contents to 53.2% in P. densiflora, resulting in reduced allelopathic abilities. However, a relatively lower decrease to 83.1% in volatiles of P. koraiensis accounts for less loss of the root-specific inhibitory effect on B. napus seedlings even after 90 °C treatment. Foliar tissues of both conifers with species-specific thermal resistance have potentially valuable functions regarding allelopathic use in horticultural compost processing ingredients, demonstrating their weed control ability during the early cultivation season where crops are transplanted in the facilitated area. [ABSTRACT FROM AUTHOR]

The chemical and physical properties of steam-exploded pine chips were analyzed by varying the temperature (190 °C to 230 °C) and time (1.5 min to 20.0 min) of steam explosion at the same severity factor (Ro), i.e., 4.0. Then, their potential as a dietary fiber source was evaluated. Overall, the chemical properties, e.g., solid recovery, cellulose, hemicellulose, and total dietary fiber content, showed a tendency to decrease as the temperature increased as well as an increasing lignin content. The physical properties, e.g., water-holding capacity, oil-holding capacity, and swelling capacity, showed decreased values in pine chips subjected to steam explosion at a temperature of 210 °C or greater. The chemical and physical properties of the steam-exploded pine chips, which were subjected to steam explosion at different temperatures and times at the selected Ro) considerably changed, starting at a temperature of 200 °C for 11.5 min. Even with the same severity factor, the steam-exploded pine chips at a temperature of 200 °C for 11.5 min showed the greatest improvement in the physical properties, i.e., water holding capacity (8.3 g/g), oil holding capacity (6.8 g/g), and swelling capacity (4.9 mL/g). [ABSTRACT FROM AUTHOR]

Pinus densiflora is an important evergreen coniferous species with both economic and ecological value. It is an endemic species in East Asia. Global climate warming greatly interferes with species survival. This study explored the impact of climate change on the distribution of this species and the relationship between its geographical distribution and climate demand, so as to provide a theoretical basis for the protection of P. densiflora under the background of global warming. This research used 565 valid data points and 19 typical climatic environmental factors distributed in China, Japan, and South Korea. The potential distribution area of P. densiflora in East Asia under the last glacial maximum (LGM), mid-Holocene, the current situation and two scenarios (RCP 2.6 and RCP 8.5) in the future (2050s and 2070s) was simulated by the MaxEnt model. The species distribution model toolbox in ArcGIS software was used to analyze the potential distribution range and change of P. densiflora. The contribution rates, jackknife test and environmental variable response curves were used to assess the importance of key climate factors. The area under the receiver-operating characteristic curve (AUC) was used to evaluate model accuracy. The MaxEnt model had an excellent simulation effect (AUC = 0.982). The forecast showed that the Korean Peninsula and Japan were highly suitable areas for P. densiflora, and the area had little change. Moreover, during the LGM, there was no large-scale retreat to the south, and it was likely to survive in situ in mountain shelters. The results suggested that Japan may be the origin of P. densiflora rather than the Shandong Peninsula of China. The distribution area of P. densiflora in the mid-Holocene and future scenarios was reduced compared with the current distribution, and the reduction of future distribution was greater, indicating that climate warming will have certain negative impacts on the distribution of P. densiflora in the future. The precipitation of the warmest quarter (Bio18), temperature seasonality (Bio4), mean annual temperature (Bio1) and mean temperature of the wettest quarter (Bio8) had the greatest impact on the distribution area of P. densiflora. [ABSTRACT FROM AUTHOR]

The concentration of atmospheric CO2 is increasing largely owing to human activities. Although it is well established that elevated CO2 (eCO2) stimulates plant growth and primary productivity, the effect of eCO2 on soil microbial communities remains poorly understood. In this study, we aimed to examine the effects of eCO2 on the taxonomical diversity, composition, and structure of rhizosphere microbial communities of Korean red pine (Pinus densiflora) through next-generation sequencing (NGS) of 16S rRNA genes. Three bacterial phyla, Proteobacteria, Acidobacteria, and Actinobacteria, were found to be dominant in all samples. Species richness estimates (Chao1 and ACE) and diversity indices (Shannon and Simpson) for the three sampling chambers were the highest from the eCO2 (approximately 1.4× ambient, ≈ 560 ppm). These findings suggested that elevated atmospheric CO2 affected the bacterial community composition in the rhizosphere of Korean red pine (Pinus densiflora).

Many plant roots associate with fungi to form mycorrhizae; tree roots especially associate with ectomycorrhizal fungi, such as Tricholoma species. Tricholoma matsutake is an economically important fungus in Asian countries and usually inhabits forests primarily composed of Pinus densiflora (Japanese red pine). In this study, to understand the mycorrhizal association between T. matsutake and P. densiflora , genes specifically expressed in mycorrhiza compared with those expressed in mycelia and fruiting bodies were identified by RNA-seq. This revealed that genes for chromatin, proteasomes, signal transduction, pheromones, cell surface receptors, cytoskeleton, RNA processing and transporters from T. matsutake were highly expressed in mycorrhiza. It also identified 35 mycorrhiza-induced small secreted proteins (MiSSPs) that were highly expressed in mycorrhiza. Meanwhile, genes for proteases, defence-related proteins, cell-wall degradation, signal transduction, pinene synthesis, plant hormones and transporters from P. densiflora were highly expressed in mycorrhiza. These genes may be involved in mycorrhizal formation and maintenance. A MiSSP, 1460819, was highly expressed in mycorrhiza, and this expression was maintained for 24 months. These results provide insight into the mycorrhizal association between T. matsutake and P. densiflora. [ABSTRACT FROM AUTHOR]

In this study, we isolated endophytic fungi from the conifer leaves of Pinus densiflora inhabiting Mt. Gyehwasan in Korea. We identified the isolated fungal strains based on their morphological characteristics and phylogenetic analysis using DNA sequences of the internal transcribed spacer, small subunit rDNA, large subunit rDNA, and β-tubulin region. In the process of this study, we confirmed two endophytic fungi that have not been recorded previously in Korea, Lophiostoma macrostomum and Pestalotiopsis lespedezae. In this report, we described the morphological characteristics of these fungal strains and the results of their molecular analysis.

The study of population genetic structure and historical dynamics of species with disjunct distribution can reveal the mechanisms through with they were formed. Pinus densiflora is an essential tree species with ecological and economic value, and its natural distribution shows a disjunct pattern. Using transcriptome-level SNP data from 220 samples representing 32 naturally-distributed populations in East Asia, we investigated Pinus densiflora genetic diversity and structure, divergence time, and ancestral distribution. We identified five subpopulations which diverged approximately 2.02–1.49 million years ago, and found relatively low genetic differentiation among the three large subpopulations (SL, JH, and JK). Northeast China is the most likely origin, and its current distribution is the result of dispersal and vicariance events. It migrated southwest through the Liaodong Peninsula to the Shandong Peninsula and southeast through the Korean Peninsula to Japan. These results provide a basis for the conservation and management of P. densiflora in the future and the evolutionary study of species with similar life histories.

Physiological response and transcriptome changes were observed to investigate the effects on the growth, metabolism and genetic changes of Pinus densiflora grown for a long time in an environment with an elevated atmospheric CO2 concentration. Pine trees were grown at ambient (400 ppm) and elevated (560 ppm and 720 ppm) CO2 concentrations for 10 years in open-top chambers. The content of nonstructural carbohydrates was significantly increased in elevated CO2. It was notable that the contents of chlorophylls significantly decreased at an elevated CO2. The activities of antioxidants were significantly increased at an elevated CO2 concentration of 720 ppm. We analyzed the differences in the transcriptomes of Pinus densiflora at ambient and elevated CO2 concentrations and elucidated the functions of the differentially expressed genes (DEGs). RNA-Seq analysis identified 2415 and 4462 DEGs between an ambient and elevated CO2 concentrations of 560 ppm and 720 ppm, respectively. Genes related to glycolysis/gluconeogenesis and starch/sucrose metabolism were unchanged or decreased at an elevated CO2 concentration of 560 ppm and tended to increase at an elevated CO2 concentration of 720 ppm. It was confirmed that the expression levels of genes related to photosynthesis and antioxidants were increased at an elevated CO2 concentration of 720 ppm.

This study investigates whether red pine ( Pinus densiflora Sieb. et Zucc.) bark extract (PBE) can alleviate diabetes and abnormal apoptosis signaling pathways in the hippocampus of streptozotocin (STZ)-induced diabetic Sprague-Dawley (SD) rats. Two dosages of PBE (15 and 30 mg/kg of body weight/day) were administered orally to STZ-induced diabetic SD rats for 20 days. Blood glucose level and body weight were measured once per week. After 20 days of oral administration of PBE, the rat hippocampus was collected, and the production of Akt, p -Akt, GSK-3β, p -GSK-3β, tau, p -tau, Bax, and Bcl-2 proteins were determined by western blot analysis. A decrease in blood glucose level and recovery of body weight were observed in PBE-treated diabetic rats. In the Akt/GSK-3β/tau signaling pathway, PBE inhibited diabetes-induced Akt inactivation, GSK-3β inactivation, and tau hyperphosphorylation. The protein production ratio of Bax/Bcl-2 was restored to the control group level. These results suggest that PBE, rich in phenolic compounds, can be used as a functional food ingredient to ameliorate neuronal apoptosis in diabetes mellitus.

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This paper proposes a non-contact, online, rapid, and non-destructive measurement method of Pinus densiflora S.et Z. (Pinus densiflora) dimension lumber based on an algorithm of maximizing lumber recovery by minimizing the enclosure rectangle fitting area. The method takes the full influence of multiple factors, such as the difficulty in measuring large-size dimension lumber, conveying deflection, etc. into account. Image splicing, object and background segmentation, and lumber size measurements are carried out. Compared to other current algorithms, it can decrease the measurement errors and improve measurement efficiency. The problems of slow image segmentation, large-size lumber measurement, and conveying deflection are solved. Through measurement tests and error analysis, the measurement accuracy of the lumber size can reach 0.8 mm/m. This method meets the requirements of high-speed lumber production and lays the foundation for the development of a lumber detection and evaluation system.

The aim of this study is to identify the active compounds of the essential oil extracted from the Pinus densiflora (Sieb. et Zucc.) wood using the hydrodistillation method and evaluate their anti-inflammatory activity. The chemical composition of the oil was identified by GC–MS analysis, and its anti-inflammatory activity was assessed by investigating its effect on the expression of interleukin-4 (IL-4), interleukin-13 (IL-13), and β-hexosaminidase in lipopolysaccharide (LPS)-stimulated RBL-2H3 cells. Treatment of the LPS-stimulated RBL-2H3 cells with the oil and its fractions downregulated the production of pro-inflammatory cytokines such as IL-4 and IL-13 and further attenuated the secretion of β-hexosaminidase out of the cells to a significant level. Among the five obtained fractions, fraction E exhibited the best anti-inflammatory activity, and its main constituent, longifolene, was considered as the active compound. Moreover, the inhibitory effect of longifolene on the expression levels of IL-4 and IL-13 and the β-hexosaminidase secretion was similar to that of the P. densiflora wood oil, indicating longifolene as the active constituent of the P. densiflora wood oil with immunosuppressive effects on inflammation. [ABSTRACT FROM AUTHOR]