210 results on '"Petroleomics"'
Search Results
2. Assessment of the effect of short-term weathering on the molecular-level chemical composition of crude oils in contact with aquatic environments.
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Carregosa, Jhonattas Carvalho, Castiblanco, Julian Eduardo Ballén, Santos, Tarcísio Martins, Prata, Paloma Santana, Santos, Jandyson Machado, and Wisniewski Jr, Alberto
- Subjects
CHEMICAL weathering ,PETROLEUM ,WEATHERING ,OIL spills ,NAPHTHENIC acids - Abstract
Multiple studies have focused on the effect of long-term weathering processes on oils after spill events, without considering the chemical compositional changes occurring shortly after the release of oil into the environment. Therefore, the present study provides a broad chemical characterization for understanding of the changes occurring in the chemical compositions of intermediate (°API = 27.0) and heavy (°API = 20.9) oils from the Sergipe-Alagoas basin submitted to two simulated situations, one under marine conditions and the other in a riverine environment. Samples of the oils were collected during the first 72 h of contact with the simulated environments, followed by evaluation of their chemical compositions. SARA fractionation was used to isolate the resins, which were characterized at the molecular level by UHRMS. The evaporation process was highlighted, with the GC-FID chromatographic profiles showing the disappearance of compounds from n-C
10 until n-C16 , as well as changes in the weathering indexes and pristane + n-C17 /phytane + n-C18 ratios for the crude oils submitted to the riverine conditions. Analysis of the resins fraction showed that basic polar compounds underwent little or no alterations during the early stages of weathering. The marine environment was shown to be much less oxidative than the riverine environment. For both environments, a feature highlighted was an increase of acidic oxygenated compounds with the increase of weathering, especially for the crude oil with °API = 27.0. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
- View/download PDF
3. Molecular Characterization of Hydrocarbons in Petroleum by Ultrahigh-Resolution Mass Spectrometry.
- Author
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Liu, Jikun, Wang, Litao, Chen, Fei, Hu, Wenya, Dong, Chenglong, Wang, Yinghao, and Han, Yehua
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MASS spectrometry , *PETROLEUM , *PETROLEUM products , *HYDROCARBONS , *IONS , *ORGANIC geochemistry - Abstract
The progress in ultrahigh-resolution mass spectrometry (UHRMS) and related technologies has significantly promoted the development of petroleomics. The study of petroleomics has greatly broadened our knowledge of the composition of petroleum at the molecular level, especially heavy fractions that cannot be analyzed by gas chromatography (GC)-based methods. To date, heteroatom-containing (O, N, S, and metal atoms) compounds in petroleum have been studied extensively by UHRMS. Nevertheless, the main components of petroleum, hydrocarbon compounds, have remained out of reach of petroleomics characterization for a long time because they are too difficult to be softly and efficiently ionized for UHRMS analysis. It is undoubtedly the case that petroleum hydrocarbons should not be the missing part of petroleomics characterization since they play important roles not only as feeding pools for various high value-added petroleum products but also as critical biomarkers for geochemistry studies. Here, the most recent breakthroughs in petroleomics characterization of hydrocarbon compounds using UHRMS rather than conventional methods have been reviewed. Innovations of soft ionization methods can transform non-polar hydrocarbon molecules into molecular ions or quasi-molecular ions that are reachable for UHRMS without fragmentation. The development of data processing methods has assisted the decoding of the complicated UHRMS data to visualize the molecular composition and structure of hydrocarbon compounds. These advances make it possible to see the whole picture of petroleum compositions, from light distillation fractions to heavy distillation fractions, and from small volatile molecules to large non-volatile ones. The applications of UHRMS-based methods for petroleomics characterization of hydrocarbon compounds in crude oils and various petroleum samples including fuel oil, slurry, and even asphaltene have made a great contribution to petrochemistry and geochemistry studies, especially in the fields of molecular refining and biomarker discovery. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
4. Automated filtering scripts based on accurate mass applied to comprehensive two-dimensional gas chromatography coupled to high resolution mass spectrometry for group-type analysis of naphthenic acids
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Naiara Mariana Fiori Monteiro Sampaio, Juliana Crucello, Iris Medeiros Junior, Rogerio Mesquita Carvalho, and Leandro Wang Hantao
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Environmental ,GCxGC ,Multidimensional chromatography ,Oil and gas industry ,Petroleomics ,Scripting ,Analytical chemistry ,QD71-142 - Abstract
In this work, it is reported the detailed evaluation of filtering scripts for comprehensive two-dimensional gas chromatography coupled with high-resolution mass spectrometry (GC×GC–HRMS). Automated scripts were built to perform group-type analysis of naphthenic acids (NAs) in complex mixtures, like produced water (PW) samples. The logical operations were based on high-resolution mass spectral information acquired by using electron ionization (EI) and chemical ionization in the positive mode (PCI). The most common derivatization methods were carefully evaluated for group-type analysis. The performance of the scripts was evaluated using the rank metric (RM), wherein the sum-normalized absolute difference was calculated for true positives versus false positives. The best performing approach for qualitative analysis was attained by combining the derivatization with N-tert-butyldimethylsilyl-N-methyltrifluoroacetamide (MTBSTFA) with EI due to the high intensity and characteristic pseudo-molecular ions (even-electron [M-57]+). The data obtained supported the development of selective scripts, exhibiting accuracy values above 98 % and 88 % for the reference and unknown PW samples, respectively. The retention pattern of GC×GC was also used as a discriminant parameter for ambiguous identification, highlighting the synergy between GC×GC and HRMS. The proposed scripts are an interesting alternative to profile 154 classes of MTBSTFA-derived NAs, which considerably reduced the time spent in manual data curation and annotation, while improving the reliability of the results. This is an important step to aid in the development of standard methods for the study and regulation of water-soluble compounds found in PW samples.
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- 2022
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5. Implications of microbial enhanced oil recovery and waterflooding for geochemical interpretation of recovered oils
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LUCIANA G.P. SODRÉ, LAERCIO L. MARTINS, LORRAINE LOUISE G.C. DE ARAUJO, DANIELLE M.M. FRANCO, BONIEK G. VAZ, WANDERSON ROMÃO, VALÉRIA M. MERZEL, and GEORGIANA F. DA CRUZ
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Biomarkers ,biosurfactant ,MEOR ,oil recovery ,petroleomics ,Science - Abstract
Abstract Biosurfactants and waterflooding have been widely reported thus far for enhancing oil production. Nevertheless, there is a lack of literature to explore enhanced oil recovered methods effects on its chemical composition. The aim of this work is to investigate the effects of a biosurfactant produced by Bacillus safensis and brine injection on the recovered petroleum composition, and their implications for geochemical interpretation. Original and oils recovered from displacement tests were analyzed by gas chromatography and ultra-high-resolution mass spectrometry, emphasizing saturated and aromatic biomarkers and basic and acidic polar compounds. Geochemical parameters based on some saturated compounds were subtly affected by the recovery methods, showing their reliable applicability in geochemical studies. Contrarily, parameters based on some aromatic compounds were more affected by biosurfactant flooding, mostly the low molecular weight compounds. Thus, these aromatic parameters should be applied with caution after such methods. The distribution of basic and acidic polar compounds can also be modified affecting the geochemical interpretation. In the case of the basic ones, the biosurfactant greatly influenced the N class species with favorable loss of lower aromaticity compounds. In addition to water solubilization, the compositional changes described in this study can be related to fractionation due to adsorption on reservoir rocks.
- Published
- 2022
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- View/download PDF
6. Molecular Characterization of Hydrocarbons in Petroleum by Ultrahigh-Resolution Mass Spectrometry
- Author
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Jikun Liu, Litao Wang, Fei Chen, Wenya Hu, Chenglong Dong, Yinghao Wang, and Yehua Han
- Subjects
petroleomics ,ultrahigh-resolution mass spectrometry ,petroleum hydrocarbon ,molecular characterization ,ionization method ,data processing ,Technology - Abstract
The progress in ultrahigh-resolution mass spectrometry (UHRMS) and related technologies has significantly promoted the development of petroleomics. The study of petroleomics has greatly broadened our knowledge of the composition of petroleum at the molecular level, especially heavy fractions that cannot be analyzed by gas chromatography (GC)-based methods. To date, heteroatom-containing (O, N, S, and metal atoms) compounds in petroleum have been studied extensively by UHRMS. Nevertheless, the main components of petroleum, hydrocarbon compounds, have remained out of reach of petroleomics characterization for a long time because they are too difficult to be softly and efficiently ionized for UHRMS analysis. It is undoubtedly the case that petroleum hydrocarbons should not be the missing part of petroleomics characterization since they play important roles not only as feeding pools for various high value-added petroleum products but also as critical biomarkers for geochemistry studies. Here, the most recent breakthroughs in petroleomics characterization of hydrocarbon compounds using UHRMS rather than conventional methods have been reviewed. Innovations of soft ionization methods can transform non-polar hydrocarbon molecules into molecular ions or quasi-molecular ions that are reachable for UHRMS without fragmentation. The development of data processing methods has assisted the decoding of the complicated UHRMS data to visualize the molecular composition and structure of hydrocarbon compounds. These advances make it possible to see the whole picture of petroleum compositions, from light distillation fractions to heavy distillation fractions, and from small volatile molecules to large non-volatile ones. The applications of UHRMS-based methods for petroleomics characterization of hydrocarbon compounds in crude oils and various petroleum samples including fuel oil, slurry, and even asphaltene have made a great contribution to petrochemistry and geochemistry studies, especially in the fields of molecular refining and biomarker discovery.
- Published
- 2023
- Full Text
- View/download PDF
7. Mass Spectrometry as a Crucial Analytical Basis for Omics Sciences.
- Author
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Zaikin, V. G. and Borisov, R. S.
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LIFE sciences , *GLYCOMICS , *PROTEOMICS , *PROBLEM solving , *GENOMICS - Abstract
This review is devoted to the consideration of mass spectrometric platforms as applied to omics sciences. The most significant attention is paid to omics related to life sciences (genomics, proteomics, meta-bolomics, lipidomics, glycomics, plantomics, etc.). Mass spectrometric approaches to solving the problems of petroleomics, polymeromics, foodomics, humeomics, and exosomics, related to inorganic sciences, are also discussed. The review comparatively presents the advantages of various principles of separation and mass spectral techniques, complementary derivatization, used to obtain large arrays of various structural and quantitative information in the mentioned omics sciences. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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8. AVALIAÇÃO DA EXTENSÃO DA BIODEGRADAÇÃO DE PETRÓLEOS BRASILEIROS COM ÊNFASE NOS N-ALQUILCICLOHEXANOS
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Laercio Lopes Martins, Georgiana Feitosa da Cruz, Lívia Carvalho Santos, Marcos Albieri Pudenzi, and Marcos Nogueira Eberlin
- Subjects
petroleum ,biodegradation ,n-alkylcyclohexanes ,GC-MS ,petroleomics ,Chemistry ,QD1-999 - Abstract
The n-alkylcyclohexanes are poorly evaluated in biodegradation studies of Brazilian petroleum samples. In this context, this work aimed to use the homologue series of alkylcyclohexanes to assess extend of biodegradation of 26 petroleum samples from five Brazilian sedimentary basins, analyzed by gas chromatography coupled to mass spectrometry. The n-alkylcyclohexanes compounds were detected in all samples, with a distribution similar to the n-alkane profile, in which their abundance decreasing with increasing of the biodegradation extent. Based on this, it was suggested the use of the new parameter H30/DC together with the H30/AC already proposed, calculated by the ratio between C30 hopane to the dodecyl-cyclohexane, to assess biodegradation level according Peter and Moldowan scale (PM scale). In addition, it was observed an increasing in the relative abundance of DBE 2 from class O2, analyzed by ESI(-) FT-ICR MS, mainly due to the formation of monocyclic acids with biodegradation, which correlates with the decrease of n-alkylcyclohexanes, a possible precursor of these acids.
- Published
- 2019
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9. Systems Analysis of the Evolution of Views on Oil Systems: From Petroleum Chemistry to Petroinformatics.
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Safieva, R. Z. and Mishin, V. D.
- Subjects
PETROLEUM chemistry ,SYSTEM analysis ,MULTIVARIATE analysis ,CHEMOMETRICS ,DATA analysis ,PETROLEUM - Abstract
Essentially different approaches to studying oil systems (analytical, colloid-chemical, model, chemo-informational), regardless of the chronological periods of their development, are described. The analytical approach, being historically first, today, with the progress of petroleomics, becomes the source of digital data on the detailed chemical composition of oil systems, which is particularly important for the progress of the chemo-informational approach, petroinformatics. From the standpoint of systems analysis, specifically petroinformatics combines the achievements of all the other approaches, because the availability of the initial digital data on the detailed composition, obtained by petroleomics, on the parameters of the colloid-disperse structure, and on reference properties of a representative set of oil system samples gives grounds to expect that the use of chemometrics and mathematical methods of multivariate data analysis will allow reliable prediction of practically important reference properties of new oil system samples. An example of comparative processing of multivariate data for a limited sample of Russian crude oils using mathematical methods is presented. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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10. Fourier transform ion cyclotron resonance mass spectrometry for petroleomics
- Author
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Hauschild, Jennifer M. and Cartwright, Hugh
- Subjects
547.83 ,Physical Sciences ,Chemistry & allied sciences ,Computational chemistry ,Mass spectrometry ,Physical & theoretical chemistry ,mass spectrometry ,machine learning ,petroleomics ,artificial neural networks ,data modelling ,genetic algorithms - Abstract
The past two decades have witnessed tremendous advances in the field of high accuracy, high mass resolution data acquisition of complex samples such as crude oils and the human proteome. With the development of Fourier transform ion cyclotron resonance mass spectrometry, the rapidly growing field of petroleomics has emerged, whose goal is to process and analyse the large volumes of complex and often poorly understood data on crude oils generated by mass spectrometry. As global oil resources deplete, oil companies are increasingly moving towards the extraction and refining of the still plentiful reserves of heavy, carbon rich and highly contaminated crude oil. It is essential that the oil industry gather the maximum possible amount of information about the crude oil prior to setting up the drilling infrastructure, in order to reduce processing costs. This project describes how machine learning can be used as a novel way to extract critical information from complex mass spectra which will aid in the processing of crude oils. The thesis discusses the experimental methods involved in acquiring high accuracy mass spectral data for a large and key industry-standard set of crude oil samples. These data are subsequently analysed to identify possible links between the raw mass spectra and certain physical properties of the oils, such as pour point and sulphur content. Methods including artificial neural networks and self organising maps are described and the use of spectral clustering and pattern recognition to classify crude oils is investigated. The main focus of the research, the creation of an original simulated annealing genetic algorithm hybrid technique (SAGA), is discussed in detail and the successes of modelling a number of different datasets using all described methods are outlined. Despite the complexity of the underlying mass spectrometry data, which reflects the considerable chemical diversity of the samples themselves, the results show that physical properties can be modelled with varying degrees of success. When modelling pour point temperatures, the artificial neural network achieved an average prediction error of less than 10% while SAGA predicted the same values with an average accuracy of more than 85%. It did not prove possible to model any of the other properties with such statistical significance; however improvements to feature extraction and pre-processing of the spectral data as well as enhancement of the modelling techniques should yield more consistent and statistically reliable results. These should in due course lead to a comprehensive model which the oil industry can use to process crude oil data using rapid and cost effective analytical methods.
- Published
- 2012
11. Assessing raw materials as potential adsorbents to remove acidic compounds from Brazilian crude oils by ESI (-) FT-ICR MS
- Author
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GEIZILA A.P. ABIB, LAERCIO L. MARTINS, LORRAINE LOUISE G.C. DE ARAUJO, TATIANA V. ISIDORIO, MARCOS A. PUDENZI, VICTOR HUGO SANTOS, and GEORGIANA F. DA CRUZ
- Subjects
petroleum ,adsorbent ,polar compounds ,naphthenic acid ,ESI (-) FT-ICR MS ,petroleomics ,Science - Abstract
Abstract The presence of acidic compounds as naphthenic acids in crude oil causes several problems for the petroleum industry, including corrosion in both upstream and downstream production processes. Based on this scenario, the main objective of this work was to investigate the removal of the acidic compound from two Brazilian heavy oils by adsorption processes using six potential adsorbents: powdered shale, activated carbon, bentonite, silica gel, powdered sandstone and powdered wood. These raw materials were previously characterized by conventional and surface analysis techniques, which show that they offer a good surface area and thermal stability. To evaluate the removal efficiency at the molecular level, the crude oil samples and the filtered oils were analyzed by negative electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry [ESI (-) FTICR MS]. The O2 class, which is related to the relatively high acidity of the samples, was the most abundant in both crude oil samples, moreover, this class was more retained by adsorbents. Silica gel, activated carbon and bentonite were the best adsorbents of acidic compounds from the tested oils, in agreement with their markedly higher surface area and porous volume. Additionally, a chromatographic analysis was performed and showed no changes in the oil profile.
- Published
- 2020
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12. Unified multi-parameter predictive modeling of crude oil and its distilled fractions through Artificial Neural Networks.
- Author
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Teixeira, Carlos Alberto, de Oliveira, Amilton Moreira, Junior, Iris Medeiros, and Hantao, Leandro Wang
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ARTIFICIAL neural networks , *PETROLEUM , *PETROLEUM products , *PREDICTION models , *SULFUR compounds - Abstract
• Convenient automated analysis in 6 min using HRMS fingerprinting. • CI-HRMS-based stepwise assignment for precise composition analysis. • Single ANN model to estimate API gravity, sulfur, and nitrogen. • Unified model evaluated parameters in crude oil and distillates simultaneously. • Independent models with R2 0.86–0.97. This article proposes an alternative approach for assessing four quality parameters of petroleum and its main products, namely API gravity, total sulfur, nitrogen content, and basic nitrogen content. Such primary measures are determined experimentally using four ASTM protocols. The proposed method is based on the use of a chemical ionization Fourier transform Orbitrap® mass spectrometer (CI-HRMS) and a multivariate model that allows for the simultaneous assessment of a broad range of parameters, regardless of the volatility of the complex sample (crude oil, diesel, gas oil, naphtha, and kerosene). The composition assignment is performed stepwise based on the analysis of the monoisotopic masses and isotope patterns to generate chemically meaningful identifications. The predominant chemical composition consisted of classes of compounds containing sulfur, nitrogen, and oxygen. The analysis time was about 6 min, due to a fast automated analysis that uses fingerprinting information to predict the features of crude oil and its derivatives. The developed Artificial Neural Network (ANN) models are independent of the volatility of the sample and can be applied to both raw petroleum and its products. The ANN models afford acceptable predictions. The values of the global coefficient of determination (R2) ranged from 0.86 to 0.97, which were calculated between predicted and reference values – obtained from ASTM methods. The four quality parameters are estimated by convenient CI-HRMS method and such measurements are demonstrated to be a viable alternative to the classic ASTM methods otherwise only available by laborious and low sample throughput experimental techniques. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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13. Classification of produced water samples using class-oriented chemometrics and comprehensive two-dimensional gas chromatography coupled to mass spectrometry.
- Author
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Ballén Castiblanco, Julián Eduardo, Calvacanti Ferreira, Victor Hugo, Teixeira, Carlos Alberto, and Hantao, Leandro Wang
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OIL field brines , *WATER sampling , *CHEMOMETRICS , *MASS spectrometry , *WATER use , *GAS chromatography - Abstract
Produced water (PW) is a type of wastewater that arises during oil and gas production. Due to its potential environmental impact, PW is one of the most closely monitored forms of wastewater in the petroleum industry. The total oil and grease (TOG) content in the water is a crucial parameter for assessing the environmental impact of PW. Traditional methods for analyzing TOG in PW can be time-consuming and may not be compatible with green chemistry principles. In this study, an alternative method for classifying PW samples is proposed using a one-class classifier (OCC) model, which has proven useful for classification problems. To achieve this goal, headspace solid-phase microextraction (HS-SPME) combined with comprehensive two-dimensional gas chromatography (GC×GC) were employed to obtain TOG profiles from PW. A series of simulated PW samples containing TOG were generated using a mixture design comprising four petrochemicals at concentrations ranging from 10 mg L-1 to 50 mg L-1. The polydimethylsiloxane (PDMS) fiber showed the most representative extraction of analytes. The optimization of the HS-SPME method was performed using a Doehlert design with two variables, and the final conditions were set at 80 °C and 70 min for extraction temperature and time, respectively. A pixel-based data approach was used to implement data-driven soft independent modeling by class analogy (DD-SIMCA). Although DD-SIMCA is a developing area in GC×GC studies, the proposed model produced outstanding results with a sensitivity of 94.3 %, specificity of 95.0 %, and accuracy of 94.5 %, considering the complex and broad compositional range of the modeled mixtures. These findings demonstrated the effectiveness of the OCC model approach in classifying PW samples according to environmental regulations. [Display omitted] • Total oil and grease profiles can be utilized for the classification of produced water samples according to local resolution. • A Doehlert design with two variables is suitable for optimizing the HS-SPME method. • A pixel-based data approach, utilizing two-dimensional chromatograms for multivariate data processing. • One-class classifier models are appropriate for solving classification problems using chromatographic profiles. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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14. Petroleomics by design of experiments in ESI(±)FT-ICR MS analysis.
- Author
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Folli, Gabriely S., dos Santos, Lindamara, Zanoni, Madson P., Silvino Chinelatto Junior, Luiz, Romão, Wanderson, and Filgueiras, Paulo R.
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CYCLOTRON resonance , *EXPERIMENTAL design , *CHEMICAL formulas , *PETROLEUM , *MASS spectrometry - Abstract
[Display omitted] • Plackett-Burman and full designs of experiments are used to obtain optimized spectral acquisition for petroleomics by ESI(±)FT-ICR MS; • Spectral profiles of FT-ICR MS are analyzed using a global desirability based on 12 responses; • Optimizing ESI(±) parameters reduced assays from 2,048 to 27; • Concentration and flow rate are the experimental parameters; • Collision voltage and time of flight are the most significant for ESI(-). The Fourier Transform Ion Cyclotron Resonance mass spectrometer (FT-ICR MS) is an efficient and widely used analytical instrument for characterizing complex organic mixtures at the molecular level. The Electrospray ionization (ESI) source is commonly used for identifying heteroatomic compounds (N, O, S) in crude oil. The high complexity of the sample provides a wealth of information, and therefore, processing and visualization programs are used to facilitate data interpretation. Several experimental configurations of parameters exist for the acquisition of ESI(+)FT-ICR MS and ESI(-)FT-ICR MS of crude oils. In this context, the design of experiments can help obtain optimal test conditions. The objective of this work was to identify the most significant experimental parameters among the 11 available (concentration, skimmer, time of flight (TOF), flow rate, ion accumulation time (IAT), accumulated scans (scans), dry temperature, capillary, dry gas, nebulizer, and collision voltage (CV)) for the acquisition of ESI(±)FT-ICR MS in Petroleomics using design of experiments by Plackett Burman and full design. Global desirability was used as a response parameter obtained from MS data (resolution, signal-to-noise ratio, signal-to-charge ratio signal with highest absolute intensity, total signals, low mass error, and high mass error). Additionally, responses from the mass spectra processing program were also used (the number of molecular formulas, molecular formulas of the majority class, average error, assignment percentage, amount of DBE in the plot of DBE versus carbon number (CN), and the relationship between the number of zero intensities and the number of DBE values in the plot of DBE versus CN). The study found that concentration and flow rate were the most significant experimental parameters for ESI(+), while for ESI(-), TOF and CV were the most significant experimental parameters. Lower concentration (0.1–0.5 mg/mL) and higher flowrate (5–6 µL/min) improved the desirability by ESI(+), higher values of CV (50 V) improved the desirability by ESI(-) for crude oil analysis. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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- View/download PDF
15. Even carbon number predominance observed in C50-C110 n-alkanes and monocyclic alkanes in the highly mature source rock.
- Author
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Dong, Chenglong, Wu, Jia, Liu, Jikun, Zhang, Weilai, Grimay, Sara, Fang, Peng, Tao, Xiaowan, Zhu, Guangyou, and Han, Yehua
- Subjects
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CARBON , *INFORMATION resources , *ALKANES - Abstract
• An unexpected wide range of alkanes from source rocks was first reported. • n-alkanes and monocyclic alkanes showed extraordinary carbon-numbered predominance. • The fresh discoveries were based on the development of HPLC-HRMS method. Carbon number predominance of n-alkanes and monocyclic alkanes reveals essential geological information such as biological source, sediment maturity, and paleoenvironmental conditions. The carbon number range of the special distribution pattern is reported to lower than C 40 , prominantly in the range of C 24 -C 34. Generally, this special distribution pattern fades away with the increase of maturity. However, these well-accepted beliefs are challenged by our investigations. In this work, C 10 -C 125 n-alkanes and monocyclic alkanes were identified for the first time in the highly mature source rock of Well Luntan-1 in Tarim Basin (China). Both series exhibited significant even carbon number predominance observed in C 50 and C 110 , but there was no carbon - number predominance observed before C 50. The similar distribution patterns of n-alkanes and monocyclic alkanes indicated that they might have the same biological precursors. The discovery of higher alkanes with ultra-long carbon chains and their extraordinary display of carbon number predominance provided us with a new perspective, which may open up the era of macromolecular biomarkers exploration. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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16. Direct inlet probe – High-resolution time-of-flight mass spectrometry as fast technique for the chemical description of complex high-boiling samples.
- Author
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Käfer, Uwe, Gröger, Thomas, Rüger, Christopher P., Czech, Hendryk, Saraji-Bozorgzad, Mohammad, Wilharm, Thomas, and Zimmermann, Ralf
- Subjects
- *
ELECTROSPRAY ionization mass spectrometry , *TIME-of-flight mass spectrometry , *MASS spectrometry , *ELECTRON impact ionization , *CHEMICAL properties , *ATMOSPHERIC ionization - Abstract
Comprehensive chemical investigation of non-volatile complex mixtures, without extensive sample pretreatment, remains challenging due to the high number of constituents with different chemical properties. In past years, direct high-resolution mass spectrometry established itself as powerful technique for the detailed molecular description of ultra-complex mixtures, but was mainly used with atmospheric pressure ionization. In this study, we present a direct inlet approach with vacuum ionization and high-resolution time-of-flight mass spectrometry. Exemplary, the non-volatile fractions of crude oil were directly inserted into the ion source and volatilized under reduced pressure conditions. An applied temperature gradient enabled thermal pre-separation, according to volatility, prior to electron ionization and mass spectrometric detection. With exact mass information, peaks were assigned to elemental compositions and grouped into component classes. Moreover, the application of supervised and unsupervised statistical tools allowed differentiation of the samples on a molecular level and the identification and attribution of significant chemical features. Image 1 • Direct analysis of petroleum vacuum residues. • Thermal preseparation of non-volatile substances before mass spectrometric detection. • Discrimination of six bitumen samples according to their molecular fingerprint. • Unsupervised classification to material type and origin. • Identification of molecular markers. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
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17. "-Omics" workflow for paleolimnological and geological archives: A review.
- Author
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Bell, Madison and Blais, Jules M.
- Abstract
"-Omics" is a powerful screening method with applications in molecular biology, toxicology, wildlife biology, natural product discovery, and many other fields. Genomics, proteomics, metabolomics, and lipidomics are common examples included under the "-omics" umbrella. This screening method uses combinations of untargeted, semi-targeted, and targeted analyses paired with data mining to facilitate researchers' understanding of the genome, proteins, and small organic molecules in biological systems. Recently, however, the use of "-omics" has expanded into the fields of geology, specifically petrology, and paleolimnology. Specifically, untargeted analyses stand to transform these fields as petroleomics, and sediment-"omics" become more prevalent. "-Omics" facilitates the visualization of small molecule profiles from environmental matrices (i.e. oil and sediment). Small molecule profiles can provide improved understanding of small molecules distributions throughout the environment, and how those compositions can change depending on conditions (i.e. climate change, weathering, etc.). "-Omics" also facilities discovery of next-generation biomarkers that can be used for oil source identification and as proxies for reconstructing past environmental changes. Untargeted analyses paired with data mining and multivariate statistical analyses represents a powerful suite of tools for hypothesis generation, and new method development for environmental reconstructions. Here we present an introduction to "-omics" methodology, technical terms, and examples of applications to paleolimnology and petrology. The purpose of this review is to highlight the important considerations at each step in the "-omics" workflow to produce high quality and statistically powerful data for petrological and paleolimnological applications. Unlabelled Image • "-Omics" workflow with examples relevant to sediment, soil and oil samples. • Highlight practical considerations for each step in the "-omics" workflow. • Establish quality control and standard practices for environmental "-omics". • Focus on production of reliable and statistically powerful "-omics" data. • Overview of common univariate and multivariate statistical analyses. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
18. Geochemical assessment of oils from the Mero Field, Santos Basin, Brazil.
- Author
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Rocha, Ygor dos Santos, Pereira, Rosana Cardoso Lopes, and Mendonça Filho, João Graciano
- Subjects
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PETROLEUM , *CARBON isotopes , *ANALYTICAL geochemistry , *HEAVY oil - Abstract
Highlights • Petroleomics of crude oils recovered from the Mero Field, Santos Basin, Brazil. • The samples were generated under a thermal condition related to the peak of the oil window (0.7–0.9%Ro). • The samples were generated by a source-rock deposited in a lacustrine environment. • ESI FT-ICR MS is a trustworthy way to achieve a geochemical assessment. Abstract Three crude oils recovered from three different wells of the Mero Field in the pre-salt of the Santos Basin were selected for detailed geochemical analysis. The samples were analyzed using a 7.2 T LTQ FT-ICR MS instrument by negative electrospray ionization (–ESI), focusing on the polar compounds, i.e., nitrogen-, sulfur-, and oxygen-containing compounds (NSO). Additionally, a combination of traditional geochemical methods including GC-FID, GC-MS, and carbon isotopic composition (whole oil and n -alkanes) were used to assess the samples. Through this work, it was demonstrated that –ESI FT-ICR MS is a reliable method for assessing crude oil composition and providing information about the origin and thermal maturity of the samples. Results showed that the dominant heteroatom classes are N 1 , O 2 , N 1 O 1 , and O 1. Due to the similarity of double bound equivalent (DBE), which means number of unsaturation present in an organic molecule, and carbon number distributions for the N 1 class species it is possible to suggest that Mero's filling history had an oil charge representing the peak of the oil window (0.7–0.9 %Ro) and that the oils were generated by a source rock deposited in a lacustrine environment. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
19. Mass Spectrometry as a Crucial Analytical Basis for Omics Sciences
- Author
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V. G. Zaikin and R. S. Borisov
- Subjects
omics sciences ,polymeromics ,plantomics ,Reviews ,metabolomics ,Analytical Chemistry ,glycomics ,proteomics ,foodomics ,genomics ,humeomics ,chromatography ,lipidomics ,petroleomics ,mass spectrometry - Abstract
This review is devoted to the consideration of mass spectrometric platforms as applied to omics sciences. The most significant attention is paid to omics related to life sciences (genomics, proteomics, meta-bolomics, lipidomics, glycomics, plantomics, etc.). Mass spectrometric approaches to solving the problems of petroleomics, polymeromics, foodomics, humeomics, and exosomics, related to inorganic sciences, are also discussed. The review comparatively presents the advantages of various principles of separation and mass spectral techniques, complementary derivatization, used to obtain large arrays of various structural and quantitative information in the mentioned omics sciences.
- Published
- 2021
20. Comparing the Intermediate Precision in Petroleomics by Ultrahigh-Resolution Mass Spectrometry
- Author
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Bruno Quirino Araújo, Paulo R. Filgueiras, Lindamara M. Souza, Wanderson Romão, Gabriely S. Folli, and Boniek G. Vaz
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Fuel Technology ,Materials science ,Ultrahigh resolution ,General Chemical Engineering ,Analytical chemistry ,Energy Engineering and Power Technology ,Petroleomics ,Mass spectrometry - Published
- 2021
21. Applications of High Performance Liquid Chromatography in the Petroleomic Analysis of Crude Oil: A Mini-Review
- Author
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Nicole E. Heshka
- Subjects
Fuel Technology ,Chromatography ,Chemistry ,General Chemical Engineering ,Analytical technique ,Energy Engineering and Power Technology ,Petroleomics ,Crude oil ,High-performance liquid chromatography ,Mini review - Abstract
High performance liquid chromatography (HPLC) is a well established analytical technique in the study of crude oil, and it has recently become more integrated within the field of petroleomics as a ...
- Published
- 2021
22. Geochemical characterization of lacustrine and marine oils from off-shore Brazilian sedimentary basins using negative-ion electrospray Fourier transform ion cyclotron resonance mass spectrometry (ESI FTICR-MS).
- Author
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Rocha, Ygor dos Santos, Pereira, Rosana Cardoso Lopes, and Mendonça Filho, João Graciano
- Subjects
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PETROLEUM geology , *KEROGEN , *GEOCHEMISTRY , *WATERSHEDS , *BIOLOGICAL tags - Abstract
Highlights • Petroleomic was applied to 69 off-shore Brazilian crude oils samples. • Kerogen type plays an important control on NSO compounds. • Clear separation based on polar species found in marine and lacustrine oils. • Negative ESI FTICR-MS can be used to perform geochemical assessment in crude oils. Abstract Lacustrine and marine crude oils from different off-shore Brazilian basins were analyzed using a 7.2 Tesla LTQ FTICR-MS instrument. The samples were analyzed via electrospray ionization in the negative ion mode focusing on the polar compounds, i.e., nitrogen-, sulfur-, and oxygen-containing (NSO) compounds. We also employed a combination of other geochemical methods, such as GC-FID and GC-MS analyses, to characterize and assess the depositional environments of the different oil families. The results indicate that lacustrine oils tend to be enriched in Nx compounds, while marine oils show preference for Ox compounds. The dominant heteroatomic classes in crude oils are N1, followed by O1, O2, and N1O1 with remarkable differences in their distributions between marine and lacustrine, strongly suggesting the control by the kerogen type of the heteroatomic compounds found in these crude oils. Considerable differences in the DBE distribution of the main classes analyzed between the crude oils allowed an efficient geochemical characterization regarding their origin. The use of negative ESI FTICR-MS as a geochemistry tool can provide additional information beyond that obtained with currently employed geochemical methods, resulting in the full comprehension of crude oil composition. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
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23. Molecular characterization of sulfur-containing compounds in petroleum.
- Author
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Han, Yehua, Zhang, Yanfen, Xu, Chunming, and Hsu, Chang Samuel
- Subjects
- *
SULFUR content of petroleum , *PETROLEUM products , *PROCESS control systems , *PETROLEUM refining , *ANALYTICAL geochemistry , *GAS chromatography/Mass spectrometry (GC-MS) - Abstract
Sulfur-containing compounds (SCCs) are the most abundant heteroatom compounds in petroleum. The characterization of SCCs in crude oils and petroleum products has great importance not only for the downstream refining process control/optimization and environmental compliance but also for upstream geochemical studies for exploration and production. In recent years, a variety of methods to analyze SCCs have been developed and practiced where chromatography and mass spectrometry have played major roles. This review summarizes the analytical strategy and some of the most important and promising technologies, from sample pretreatment to molecular level characterization. For the convenience of discussions and practical applications, we divide the petroleum mixtures containing sulfur components into gas chromatography (GC)-amenable and nonvolatile fractions. For the former, gas chromatography (GC) and comprehensive two-dimensional gas chromatography (GC × GC) utilizing sulfur-selective detectors or mass spectrometry (GC–MS) are predominant analytical techniques. For the latter, molecular characterization is much more difficult and challenging. High performance liquid chromatography (HPLC) or direct liquid infusion and its combination with mass spectrometry (LC–MS), especially ultra-high resolution mass spectrometry, such as Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS) and Orbitrap MS, associated with various atmospheric ionization techniques are the most practical approaches. Some ionization techniques are underutilized, such as atmospheric pressure chemical ionization (APCI). The use of surface desorption ionization techniques, direct electrospray ionization (DSEI) and desorption atmospheric chemical ionization (DAPCI), for the molecular characterization of insoluble kerogens that has been characterized by X-ray near edge structure spectroscopy (XANES) and X-ray photoelectron spectroscopy (XPS) remain to be explored. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
24. Negative electrospray Fourier transform ion cyclotron resonance mass spectrometry determination of the effects on the distribution of acids and nitrogen-containing compounds in the simulated thermal evolution of a Type-I source rock.
- Author
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Rocha, Ygor dos Santos, Pereira, Rosana Cardoso Lopes, and Mendonça Filho, João G.
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CYCLOTRON resonance , *NITROGEN compounds , *DECARBOXYLATION , *SULFUR compounds , *CONDENSATION - Abstract
The thermal maturity level impact on polar compounds was analyzed for a suite of hydrous pyrolysis (HP) products using a 7.2 Tesla LTQ FTICR-MS instrument. The sample suite was analyzed via electrospray ionization in the negative ion mode focusing on the polar compounds, i.e., nitrogen-, sulfur-, and oxygen-containing (NSO) compounds. The HP experiments were performed under isothermal conditions for 2 h at eleven different temperatures (300, 310, 320, 325, 330, 340, 345, 350, 355, 360 and 365 °C) to simulate the full range of thermal levels starting at early bitumen generation to maximum oil generation. The maturity suite samples consist of one immature bitumen (original sample), eleven expelled oil samples and eight residual bitumen samples. In general, O x compounds are destroyed by decarboxylation and dehydration with increasing maturity; sulfur compounds decrease; the aromaticity and degree of condensation increase; and steranoic and hopanoic acids decrease. Additionally, we investigated fluid retention properties comparing the carbon number distribution between the expelled oil and residual bitumen samples from each experiment. The maturity related changes of the acidic O 2 compounds in the expelled oil samples led us to create several regressions that we propose as new maturity parameters covering the full range of oil generation. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
25. Fractionation of asphaltenes in n-hexane and on adsorption onto CaCO3 and characterization by ESI(+)FT-ICR MS: Part I.
- Author
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Pinto, Fernanda Endringer, Barros, Eliane V., Tose, Lilian V., Souza, Lindamara M., Terra, Luciana A., Poppi, Ronei J., Vaz, Boniek G., Vasconcelos, Gessica, Subramanian, Sreedhar, Simon, Sébastien, Sjöblom, Johan, and Romão, Wanderson
- Subjects
- *
ASPHALTENE , *POLYMER fractionation , *HEXANE , *CALCIUM carbonate , *ADSORPTION (Chemistry) , *NUCLEAR magnetic resonance , *AROMATICITY - Abstract
Two methods of asphaltenes fractionation have been employed to facilitate the characterization of their respective subfractions. The methods are based on step-wise precipitation with different n -hexane/crude oil ratios, and on adsorption onto CaCO 3 . Three subfractions were produced for each method, being named of 3.5 V, 3.5–6 V, and 6–40 V (for the first method); and non-adsorbed (bulk), adsorbed, and irreversibly adsorbed (for the second method). The fractions were characterized by elementary analysis, nuclear magnetic resonance of proton ( 1 H NMR) and by positive ion-mode electrospray Fourier transform ion cyclotron resonance mass spectrometry (ESI(+)FT-ICR MS). The elemental analysis, described in previous work, revealed that the C/H ratio for whole asphaltene and its sub-fractions varied between a narrow range (0.83–0.88) which means they present similar aromaticity or unsaturation. Furthermore, the elemental analysis corroborates with the 1 H NMR analysis suggesting that subfraction 6–40 V presented a more aromatic profile than of remaining subfractions, while for the fractionation using CaCO 3 , this behavior was observed for the adsorbed subfraction. However, a more detailed molecular information was obtained from ESI(+)-FT-ICR MS data, showing that polar compounds species with lower carbon numbers were mainly found for the irreversibly adsorbed subfraction. Besides, the double bond equivalent (DBE) distribution is an important tool to associate the chemical information with solubility parameters, in which, a narrower DBE distribution was observed for irreversibly adsorbed (for fractionation onto CaCO 3 ) and subfraction 3.5 V (fractionation in n -hexane) samples, indicating that they are less soluble in hydrocarbons. Also, solubility parameters ( δ) were calculated from ESI(+)FT-ICR MS data, where the results indicate that subfractions produced in n -hexane have a lower tendency to precipitate in hydrocarbons in relation to subfractions produced onto CaCO 3 . [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
26. Revealing the chemical characterization of asphaltenes fractions produced by N-methylpyrrolidone using FTIR, molecular fluorescence, 1H NMR, and ESI(±)FT-ICR MS.
- Author
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Carvalho, Verônica V., Vasconcelos, Géssica A., Tose, Lilian V., Santos, Heloa, Cardoso, Felipe M.R., Fleming, Felipe, Romão, Wanderson, and Vaz, Boniek G.
- Subjects
- *
ASPHALTENE analysis , *PYRROLIDINONES , *FOURIER transform infrared spectroscopy , *FLUORESCENCE , *NUCLEAR magnetic resonance , *AROMATIC compounds , *ELECTROSPRAY ionization mass spectrometry - Abstract
Heavy oil fractions studies are of great importance for the oil industry, receiving particular attention in recent decades due to interest in obtaining compounds with higher added value derived from heavy oil fractions. Moreover, these studies also aim to offer solutions to problems caused by these fractions during all oil processing steps. Asphaltenes placed in n-methylpyrrolidone (NMP) produce two fractions with distinct characteristics, soluble and insoluble in NMP (called NS and NI, respectively). In previously studies it was suggested that the NI fraction presents low content of aromatic compounds, opening a new debate on the composition of asphaltene as is widely discussed in the literature. Here, we show the deep characterization of three set of asphaltenes fractions obtained in NMP using Fourier transform ion cyclotron resonance mass spectrometry coupled to positive and negative-ions mode electrospray ionization (ESI(±)-FT-ICR MS), Fourier transform infrared spectroscopy (FTIR), molecular fluorescence and p roton nuclear magnetic resonance ( 1 H NMR) spectroscopy. FTIR, 1 H NMR and molecular fluorescence demonstrated differences among asphaltene fractions studied, in which, NS fractions exhibited a more polar and aromatic character. On the other hand, NI fractions showed nonpolar profile, being proved by the presence of high amounts of alkyl and naphthenic hydrocarbons showing high abundance of alkyl and naphthenic hydrocarbon related compounds. ESI(±)FT-ICR MS data corroborate the FTIR, 1 H NMR and molecular fluorescence data, which show NS fractions with a high proportion of heteroatomic species and higher aromaticity (higher DBE values) compared with NI fractions. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
27. Systems Analysis of the Evolution of Views on Oil Systems: From Petroleum Chemistry to Petroinformatics
- Author
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R. Z. Safieva and V. D. Mishin
- Subjects
Structure (mathematical logic) ,Computer science ,General Chemical Engineering ,Digital data ,Energy Engineering and Power Technology ,Petroleomics ,Sample (statistics) ,General Chemistry ,Petroleum chemistry ,Set (abstract data type) ,Chemometrics ,Fuel Technology ,Systems analysis ,Geochemistry and Petrology ,Biochemical engineering - Abstract
Essentially different approaches to studying oil systems (analytical, colloid-chemical, model, chemo-informational), regardless of the chronological periods of their development, are described. The analytical approach, being historically first, today, with the progress of petroleomics, becomes the source of digital data on the detailed chemical composition of oil systems, which is particularly important for the progress of the chemo-informational approach, petroinformatics. From the standpoint of systems analysis, specifically petroinformatics combines the achievements of all the other approaches, because the availability of the initial digital data on the detailed composition, obtained by petroleomics, on the parameters of the colloid-disperse structure, and on reference properties of a representative set of oil system samples gives grounds to expect that the use of chemometrics and mathematical methods of multivariate data analysis will allow reliable prediction of practically important reference properties of new oil system samples. An example of comparative processing of multivariate data for a limited sample of Russian crude oils using mathematical methods is presented.
- Published
- 2021
28. Extraction and fractionation of basic nitrogen compounds in vacuum residue by solid-phase extraction and characterization by ultra-high resolution mass spectrometry.
- Author
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Vasconcelos, Géssica A., Pereira, Rosana C.l., Santos, Carla De F., Carvalho, Veronica V., Tose, Lilian V., Romão, Wanderson, and Vaz, Boniek G.
- Subjects
- *
NITROGEN compounds , *SOLID phase extraction , *ELECTROSPRAY ionization mass spectrometry , *MASS spectrometers , *CYCLOTRON resonance - Abstract
A method to fractionate and separate nitrogen compounds according to their carbon number is presented here. Typical Brazilian vacuum residue was submitted to solid-phase extraction using a strong cation exchanger to fractionate the basic nitrogen compounds according to their molecular weight. The method described in this paper extended vacuum residue characterization by gradually removing the most basic species that suppress the ionization of compounds with higher mass (and thus less efficiently ionized). Approximately 1393 peaks were assigned when untreated vacuum residue was directly infused into a positive-ion electrospray ionization (ESI(+)) mass spectrometer coupled to Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS). In contrast, more than 3500 different nitrogenous elemental compositions were attributed after fractionation. Nitrogen compounds with carbon numbers up to C 100 were detected. Also, new classes (NO, N 2 O, and NOS) of nitrogen compounds were detected after the fractionation. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
29. High performance separation of quaternary amines using microchip non-aqueous electrophoresis coupled with contactless conductivity detection.
- Author
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Moreira, Roger Cardoso, Lopes, Marilia Sousa, Medeiros Junior, Iris, and Coltro, Wendell K.T.
- Subjects
- *
AMINES , *MICROCHIP electrophoresis , *ELECTRODES , *ELECTRIC potential , *ACETONITRILE , *METHANOL - Abstract
This study describes the development of an analytical methodology for the separation of quaternary amines using non-aqueous microchip electrophoresis (NAME) coupled with capacitively coupled contactless conductivity detection (C 4 D). All experiments were performed using a commercial microchip electrophoresis system consisting of a C 4 D detector, a high-voltage sequencer and a microfluidic platform to assemble a glass microchip with integrated sensing electrodes. The detection parameters were optimized and the best response was reached applying a 700-kHz sinusoidal wave with 14 V pp excitation voltage. The running electrolyte composition was optimized aiming to achieve the best analytical performance. The mixture containing methanol and acetonitrile at the proportion of 90:10 (v:v) as well as sodium deoxycholate provided separations of ten quaternary amines with high efficiency and baseline resolution. The separation efficiencies ranged from 8.7 × 10 4 to 3.0 × 10 5 plates/m. The proposed methodology provided linear response in the concentration range between 50 and 1000 μmol/L and limits of detection between 2 and 27 μmol/L. The analytical feasibility of the proposed methodology was tested in the determination of quaternary amines in corrosion inhibitor samples often used for coating oil pipelines. Five quaternary amines (dodecyltrimethylammonium chloride, tetradecyltrimetylammonium bromide, cetyltrimethylammonium bromide, tetraoctylammonium bromide and tetradodecylammonium bromide) were successfully detected at concentration levels from 0.07 to 6.45 mol/L. The accuracy of the developed methodology was investigated and the achieved recovery values varied from 85 to 122%. Based on the reported data, NAME-C 4 D devices exhibited great potential to provide high performance separations of hydrophobic compounds. The developed methodology can be useful for the analysis of species that usually present strong adsorption on the channel inner walls. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
30. Prediction of Surface Tension of Heavy Oil Based on Principle of Corresponding States Combined with Detailed Composition and Molecular Structure Analysis
- Author
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Masaki Kubo, Eita Shoji, Takao Tsukada, Keita Katano, Yuichi Mukawa, Koshiro Yamagiwa, and Shogo Teratani
- Subjects
Surface tension ,General Energy ,Materials science ,Petroleomics ,Thermodynamics ,Molecule ,Composition (combinatorics) ,Theorem of corresponding states - Published
- 2020
31. Petroleomics: Tools, Challenges, and Developments
- Author
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Diana Catalina Palacio Lozano, Hugh E. Jones, Mary J. Thomas, and Mark P. Barrow
- Subjects
Data processing ,business.industry ,010401 analytical chemistry ,Petroleomics ,Sample (statistics) ,010501 environmental sciences ,01 natural sciences ,Data science ,0104 chemical sciences ,Analytical Chemistry ,Visualization ,Characterization (materials science) ,Software ,Instrumentation (computer programming) ,Experimental methods ,business ,0105 earth and related environmental sciences - Abstract
The detailed molecular characterization of petroleum-related samples by mass spectrometry, often referred to as petroleomics, continues to present significant analytical challenges. As a result, petroleomics continues to be a driving force for the development of new ultrahigh resolution instrumentation, experimental methods, and data analysis procedures. Recent advances in ionization, resolving power, mass accuracy, and the use of separation methods, have allowed for record levels of compositional detail to be obtained for petroleum-related samples. To address the growing size and complexity of the data generated, vital software tools for data processing, analysis, and visualization continue to be developed. The insights gained impact upon the fields of energy and environmental science and the petrochemical industry, among others. In addition to advancing the understanding of one of nature's most complex mixtures, advances in petroleomics methodologies are being adapted for the study of other sample types, resulting in direct benefits to other fields.
- Published
- 2020
32. Prospect of Petroleomics as a Tool for Changing Refining Technologies
- Author
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Yoshiyuki Toyooka, Koichi Sato, Kazuhiro Inamura, Tsutomu Nakamura, Keita Katano, Toshiaki Hayasaka, Yuuki Takahashi, and Koji Tsuji
- Subjects
Fuel Technology ,Materials science ,Refining ,business.industry ,Energy Engineering and Power Technology ,Petroleomics ,Process engineering ,business ,Reaction modeling - Published
- 2020
33. Quantitative Molecular Composition of Heavy Petroleum Fractions: A Case Study of Fluid Catalytic Cracking Decant Oil
- Author
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Suoqi Zhao, Chunming Xu, Quan Shi, Yahe Zhang, Keng H. Chung, and Haidong Li
- Subjects
chemistry.chemical_classification ,Chromatography ,Molecular composition ,General Chemical Engineering ,Energy Engineering and Power Technology ,Petroleomics ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Mass spectrometry ,Fluid catalytic cracking ,complex mixtures ,Characterization (materials science) ,chemistry.chemical_compound ,Fuel Technology ,020401 chemical engineering ,chemistry ,Petroleum ,0204 chemical engineering ,0210 nano-technology ,Aromatic hydrocarbon - Abstract
High-resolution mass spectrometry enables molecular characterization of heavy petroleum fractions for petroleomics research. However, results from mass spectrometry are usually not quantitative. Th...
- Published
- 2020
34. Mass spectrometric characteristics and preliminary figures of merit for polyaromatic hydrocarbons via the liquid sampling-atmospheric pressure glow discharge microplasma
- Author
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R. Kenneth Marcus, Tyler J. Williams, and Jacob R. Bills
- Subjects
Glow discharge ,Chemistry ,010401 analytical chemistry ,Analytical chemistry ,Petroleomics ,Atmospheric-pressure chemical ionization ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Analytical Chemistry ,Ion ,Radical ion ,Penning ionization ,Ionization ,Spectroscopy ,Electron ionization - Abstract
The liquid sampling-atmospheric pressure glow discharge (LS-APGD) has been demonstrated as a combined atomic and molecular (CAM) ionization source, through the analysis of elemental species, small polar molecules, and proteins. Operation using 2% HNO3 as the electrolytic carrier solution is employed for elemental analysis, while simply changing to a MeOH : H2O solution results in mass spectra reflecting the protonation of polar molecular species. In an effort to expand the already diverse sampling capabilities of the LS-APGD, the determination of low-polarity polyaromatic hydrocarbons (PAHs) was investigated. These molecules contain none of the common polar sites for protonation, typically undergoing ionization via charge transfer or electron ionization, forming radical cations. While LS-APGD ionization is believed to involve both electron and Penning ionization, as well as solvent-derived gas phase proton transfer reactions, it was expected that a radical cation formation would be the sole product for PAHs. Interestingly, both radical cation and protonated molecular ions were observed for each of the PAHs studied, suggesting concurrent electron/Penning ionization and atmospheric pressure chemical ionization (APCI). In order to assess the potential analytical utility of the approach, preliminary detection limits of as low as 270 pg mL−1 (5.4 pg, absolute) have been realized. The addition of PAH species to the microplasma's analyte portfolio expands the concept of CAM ionization, finding utility in diverse fields, including environmental analysis and petroleomics.
- Published
- 2020
35. Petroleomics at the National High Magnetic Field Laboratory: A Pictorial History
- Author
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Pierre Giusti, Carlos Afonso, Ryan P. Rodgers, Sebastien Tessier, Brice Bouyssiere, Institut des sciences analytiques et de physico-chimie pour l'environnement et les materiaux (IPREM), and Université de Pau et des Pays de l'Adour (UPPA)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
General Chemical Engineering ,010401 analytical chemistry ,Energy Engineering and Power Technology ,Petroleomics ,02 engineering and technology ,Geophysics ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Fuel Technology ,[CHIM.ANAL]Chemical Sciences/Analytical chemistry ,0210 nano-technology ,High magnetic field ,Geology ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2021
36. Review on atmospheric pressure ionization sources for gas chromatography-mass spectrometry. Part II: Current applications.
- Author
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Ayala-Cabrera, Juan F., Montero, Lidia, Meckelmann, Sven W., Uteschil, Florian, and Schmitz, Oliver J.
- Subjects
- *
CHEMICAL ionization mass spectrometry , *ATMOSPHERIC ionization , *ATMOSPHERIC pressure , *MASS spectrometry , *GAS chromatography/Mass spectrometry (GC-MS) , *DRUG analysis , *ELECTRON impact ionization , *FOOD chemistry - Abstract
The application of atmospheric pressure ionization (API) sources in gas chromatography-mass spectrometry (GC-MS) determinations is becoming more popular since they have shown great capabilities to sort out the main drawbacks of vacuum ionization techniques like electron ionization (EI) and chemical ionization (CI). The development of new API techniques and set-ups have grown in the last decades, opening the field of GC-MS to new applications and facing some of the major issues in current analytical methodologies such as the requirement of a compromise between sensitivity and selectivity. Thus, this review is mainly focused on the use of GC-API-MS in different application fields such as food analysis (food safety and food metabolomics), environmental analysis, clinical analysis, drug and pharmaceutical analysis, and petroleomics, among others. The methodologies have been critically reviewed to compare the performance of different API sources and approaches, highlighting the main contributions to overcoming some of the major limitations of the current methodologies as well as the new perspectives that GC-API-MS might open in the different fields. [Display omitted] • GC-API-MS couplings have increased in many analytical fields. • GC-APCI is the most used coupling, especially in food safety and environmental analysis. • GC-APLI shows a great impact in petroleomics to detect aromatic compounds. • GC-API has overcome many analytical issues in clinical and drug analysis. • API and EI data combination is preferred in GC-MS non-targeted applications. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
37. Temporal chemical composition changes in water below a crude oil slick irradiated with natural sunlight.
- Author
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Roman-Hubers, Alina T., Aeppli, Christoph, Dodds, James N., Baker, Erin S., McFarlin, Kelly M., Letinski, Daniel J., Zhao, Lin, Mitchell, Douglas A., Parkerton, Thomas F., Prince, Roger C., Nedwed, Tim, and Rusyn, Ivan
- Subjects
COMPOSITION of water ,DISSOLVED organic matter ,PETROLEUM ,POLYCYCLIC aromatic hydrocarbons ,OIL spills ,HYDROCARBON analysis ,PETROLEUM chemicals - Abstract
Photooxidation can alter the environmental fate and effects of spilled oil. To better understand this process, oil slicks were generated on seawater mesocosms and exposed to sunlight for 8 days. The molecular composition of seawater under irradiated and non-irradiated oil slicks was characterized using ion mobility spectrometry-mass spectrometry and polyaromatic hydrocarbons analyses. Biomimetic extraction was performed to quantify neutral and ionized constituents. Results show that seawater underneath irradiated oil showed significantly higher amounts of hydrocarbons with oxygen- and sulfur-containing by-products peaking by day 4–6; however, concentrations of dissolved organic carbon were similar. Biomimetic extraction indicated toxic units in irradiated mesocosms increased, mainly due to ionized components, but remained <1, suggesting limited potential for ecotoxicity. Because the experimental design mimicked important aspects of natural conditions (freshly collected seawater, natural sunlight, and relevant oil thickness and concentrations), this study improves our understanding of the effects of photooxidation during a marine oil spill. • The composition of water beneath photooxidized oil slick is not well understood. • Untargeted analysis characterized the composition of photooxidized by-products. • Sunlight increased aqueous exposures to hydrocarbons and degradation-products. • Biomimetic extraction indicated toxic units of constituents in water increased. • Even so, toxic units remained <1 indicating low potential for acute aquatic toxicity. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
38. Discriminating Brazilian crude oils using comprehensive two-dimensional gas chromatography–mass spectrometry and multiway principal component analysis.
- Author
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Prata, Paloma S., Alexandrino, Guilherme L., Mogollón, Noroska Gabriela S., and Augusto, Fabio
- Subjects
- *
PETROLEUM , *DISCRIMINATION (Sociology) , *GAS chromatography/Mass spectrometry (GC-MS) , *MULTIPLE correspondence analysis (Statistics) , *QUANTITATIVE research , *PHENANTHRENE derivatives - Abstract
The geochemical characterization of petroleum is an essential task to develop new strategies and technologies when analyzing the commercial potential of crude oils for exploitation. Due to the chemical complexity of these samples, the use of modern analytical techniques along with multivariate exploratory data analysis approaches is an interesting strategy to extract relevant geochemical characteristics about the oils. In this work, important geochemical information obtained from crude oils from different production basins were obtained analyzing the maltene fraction of the oils by comprehensive two-dimensional gas chromatography coupled to quadrupole mass spectrometry (GC × GC–QMS), and performing multiway principal component analysis (MPCA) of the chromatographic data. The results showed that four MPC explained 93.57% of the data variance, expressing mainly the differences on the profiles of the saturated hydrocarbon fraction of the oils (C 13 -C 18 and C 19 -C 30 n -alkanes and the pristane/phytane ratio). The MPC1 grouped the samples severely biodegraded oils, while the type of the depositional paleoenvironments of the oils and its oxidation conditions (as well as their thermal maturity) could be inferred analysing others relevant MPC. Additionally, considerations about the source of the oil samples was also possible based on the overall distribution of relevant biomarkers such as the phenanthrene derivatives, tri-, tetra- and pentacyclic terpanes. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
39. Extended characterization of petroleum aromatics using off-line LC-GC-MS
- Author
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Huynh, Khoa, Jensen, Annette E., Sundberg, Jonas, Huynh, Khoa, Jensen, Annette E., and Sundberg, Jonas
- Abstract
Characterization of crude oil remains a challenge for analytical chemists. With the development of multi-dimensional chromatography and high-resolution mass spectrometry, an impressive number of compounds can be identified in a single sample. However, the large diversity in structure and abundance makes it difficult to obtain full compound coverage. Sample preparation methods such as solid-phase extraction and SARA-type separations are used to fractionate oil into compound classes. However, the molecular diversity within each fraction is still highly complex. Thus, in the routine analysis, only a small part of the chemical space is typically characterized. Obtaining a more detailed composition of crude oil is important for production, processing and environmental aspects. We have developed a highresolution fractionation method for isolation and preconcentration of trace aromatics, including oxygenated and nitrogen-containing species. The method is based on semipreparative liquid chromatography. This yields high selectivity and efficiency with separation based on aromaticity, ring size and connectivity. By the separation of the more abundant aromatics, i.e., monoaromatics and naphthalenes, trace species were isolated and enriched. This enabled the identification of features not detectable by routine methods. We demonstrate the applicability by fractionation and subsequent GC-MS analysis of 14 crude oils sourced from the North Sea. The number of tentatively identified compounds increased by approximately 60 to 150% compared to solidphase extraction and GC × GC-MS. Furthermore, the method was used to successfully identify an extended set of heteroatom-containing aromatics (e.g., amines, ketones). The method is not intended to replace traditional sample preparation techniques or multi-dimensional chromatography but acts as a complementary tool. An in-depth comparison to routine characterization techniques is presented concerning advantages and disadvantages.
- Published
- 2021
40. Effect study of the secondary oil migration distance on the composition of the nitrogenous compounds by FT-ICR MS
- Author
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Brito, Talita Pinheiro de, Vaz, Boniek Gontijo, Cruz, Georgiana Feitosa da, and Severino, Vanessa Gisele Pasqualotto
- Subjects
Compostos nitrogenados ,Petroleomics ,Mass spectrometry ,Espectrometria de massas ,Secondary oil migration ,Migração secundária do petróleo ,FT-ICR MS ,QUIMICA::FISICO-QUIMICA [CIENCIAS EXATAS E DA TERRA] ,Nitrogenous compounds ,Óleo cru ,Petroleômica ,Crude oil - Abstract
O petróleo bruto é uma mistura complexa de compostos contendo uma variedade de espécies orgânicas, com os hidrocarbonetos constituindo a fração mais abundante dessa matriz e uma menor quantidade de constituintes polares e alguns metais. Dentre os constituintes polares, os compostos nitrogenados têm sido amplamente utilizados em estudos geoquímicos. A distância percorrida pelo óleo cru desde a cozinha de geração até o reservatório se apresenta como um parâmetro importante na busca por novas acumulações de petróleo. Para esse tipo de informação, marcadores moleculares confiáveis e diagnósticos do processo são desejáveis para estimar a distância migrada pelo petróleo. No presente trabalho, a espectrometria de massas de ressonância ciclotrônica de íons com transformada de Fourier acoplada ao electrospray no modo negativo foi empregada na caracterização química de compostos nitrogenados em quatorze amostras de petróleo de três campos produtores diferentes (C, H e G). As classes de compostos heteroatômicos detectadas nas amostras foram N, N2, NO, NO2, NS, O e O2. Verificou-se que a massa molecular média (MMM) para cada valor de DBE (double bond equivalent) de compostos nitrogenados pode ser usada como um indicador da distância de migração de petróleo. Além disso, uma correlação da abundância relativa de três intervalos de átomos de carbono de alquilcarbazóis (C12-C20, C21-C29, C30+) e benzocarbazóis (C16-C20, C21-C29, C30+) revelaram o enriquecimento ou esgotamento dessas espécies com base em seus graus de alquilação, estando associado à polaridade dessas espécies e ao seu fracionamento químico ao longo da migração do petróleo. Finalmente, as razões C31+/C30- calculadas entre a abundância relativa de carbazóis e benzocarbazóis divididos por dois grupos de números de átomos de carbono mostraram um potencial para estimar a distância de migração de óleo conforme seus valores se tornam mais altos em amostras de petróleo coletadas mais distantes da cozinha de geração. Os resultados obtidos indicam a potencialidade da utilização como novos parâmetros de acesso à distância de migração secundária do petróleo. Crude oil is a complex mixture containing a variety of organic species, with hydrocarbons constituting the most abundant fraction of this matrix, and a small number of polar constituents and some metals. Among the polar constituents, nitrogenous compounds have been widely used in geochemical studies. The distance traveled by the crude oil from the source kitchen to the reservoir is an important parameter in the search for new oil accumulations. For this type of information, reliable and robust molecular markers are desirable to estimate the distance migrated by crude oil. In the present work, Fourier transform ion cyclotron resonance mass spectrometry coupled to the electrospray in negative mode was used in the chemical characterization of nitrogenous compounds in 14 oil samples from three different Brazilian fields (C, H and G). Heteroatomic compounds classes detected in the samples were N, N2, NO, NO2, NS, O, and O2. It was found that the average molecular mass (AMM) for each DBE value of nitrogen compounds (N) can be used as an indicator of oil migration distance within a Brazilian basin. Moreover, a correlation of relative abundance of three carbon atom ranges of alkyl-carbazoles (C12-C20, C21-C29, C30+) and benzocarbazoles (C16-C20, C21-C29, C30+) revealed enrichment or depletion of these species based on their degree of alkylation which can be associated to the polarity of these species and consequently to their chemical fractionation along the petroleum migration. Finally, ratios (C31+/C30-) calculated between of relative abundance of carbazoles and benzocarbazoles divided by two groups of carbon atom numbers show a potential to estimate oil migration distance as their values become higher in petroleum samples collected furthest from the source kitchen. The results obtained indicating the potentiality of using it as new parameters to access secondary migration crude oil distance. Outro
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- 2021
41. Novas abordagens em petroleômica por FT-MS empregadas em óleos brutos com diferentes características físico-químicas
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Santos, Jandyson Machado, 1988, Eberlin, Marcos Nogueira, 1959, Wisniewski Junior, Alberto, Moraes, Luiz Alberto Beraldo de, Bastos, Wagner Leonel, Bottoli, Carla Beatriz Grespan, Jardim, Isabel Cristina Sales Fontes, Universidade Estadual de Campinas. Instituto de Química, Programa de Pós-Graduação em Química, and UNIVERSIDADE ESTADUAL DE CAMPINAS
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Petróleo ,Geoquímica orgânica ,Petroleomics ,Mass spectrometry ,Fotoionização ,Petroleômica ,Oil ,Espectrometria de massa ,Photoionization ,Organic geochemistry - Abstract
Orientadores: Marcos Nogueira Eberlin, Alberto Wisniewski Junior Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Química Resumo: O estudo de óleos brutos com características físico-químicas intrínsecas, como por exemplo, elevada acidez, severo processo de emulsificação, densidade elevada, °API baixo, e elevada quantidade de gás e água de produção, tem apresentado os maiores desafios quando se busca a compreensão química à nível molecular dessa complexa matriz por técnicas analíticas, não sendo diferente para o campo da petroleômica, que tem utilizado técnicas de altíssima resolução e exatidão em espectrometria de massas visando o estudo de óleos brutos e seus derivados. No primeiro capítulo dessa tese, o trabalho descreve o estudo de óleos brutos com diferentes características físico-químicas no âmbito da petroleômica a partir de novas estratégias empregando APPI FT-ICR MS otimizado por planejamentos experimentais. Também foi realizado de forma inédita, o estudo de um óleo bruto contaminado a partir da técnica de IM-MS, sendo possível a resolução, separação e identificação de seus contaminantes e aditivos. No segundo capítulo, foi realizado o estudo de óleos brutos com diferentes °API e suas frações SARA a partir da técnica de FT-ICR MS em combinação com múltiplas técnicas de ionização, com ênfase na caracterização abrangente das frações de resinas e asfaltenos. Além disso, uma adaptação no fracionamento SARA foi proposta, e correlações entre os dados obtidos a nível molecular via FT-ICR MS e os valores de °API de diferentes óleos brutos e suas respectivas frações SARA foram investigadas. Os resultados mostraram que é possível correlacionar os dados à nível molecular e os diferentes °API independentemente se a análise é realizada no óleo bruto individual ou em suas frações de resinas e asfaltenos, e ainda, independente da técnica de ionização utilizada. O pré-fracionamento SARA e análises por FT-ICR MS utilizando diferentes técnicas de ionização, permitiu a caracterização das frações individuais, proporcionando uma redução da complexidade da amostra e uma caracterização química mais completa e seletiva dos componentes presentes no óleo bruto Abstract: The study of crude oils with intrinsic physicochemical characteristics, such as high acidity, severe emulsification process, high density, low API gravity, and high amount of gas and water production, has presented the greatest challenges when one aims to understand at the molecular level this complex mixture using analytical techniques. It has not been different for the field called petroleomics, which has used techniques with ultra-high resolution and mass accuracy in mass spectrometry for the study of crude oils and their derivatives. In the first chapter of this thesis, it is describes the study of crude oils with different physicochemical characteristics in the scope of petroleomics from new strategies employing APPI FT-ICR MS technique which was optimized by experimental design. We also have performed a study of a contaminated crude oil using the IM-MS technique, being possible to resolve, separate and identify their contaminants and additives. In the second chapter, the study of crude oils with different API gravities and their SARA fractions was done using FT-ICR MS technique in combination with multiple ionization techniques, with emphasis on the comprehensive characterization of resin and asphaltene fractions. In addition, an adaptation in the SARA fractionation was applied, and correlations between the data obtained at the molecular level via FT-ICR MS and the API gravities of different crude oils and their respective SARA fractions were investigated. The results showed that it is possible to correlate the data at the molecular level and the API gravities regardless of whether the analysis is performed on individual crude oil or their resin and asphaltenes fractions, and also, regardless of the employed ionization technique. The SARA fractionation and FT-ICR MS analysis using different ionization techniques allowed the characterization of the individual fractions, providing a reduction of the sample complexity and a more complete and selective chemical characterization of the components present in crude oils Doutorado Química Analítica Doutor em Ciências FAPESP 2013/19161-4 CNPQ PETROBRAS
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- 2021
42. Mass Spectrometry in Petroleum Chemistry (Petroleomics) (Review)
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Larisa N. Kulikova, Vladimir G. Zaikin, and Roman S. Borisov
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Field (physics) ,Petroleum engineering ,010405 organic chemistry ,General Chemical Engineering ,Oil refinery ,Energy Engineering and Power Technology ,Petroleomics ,General Chemistry ,Petroleum chemistry ,010402 general chemistry ,Mass spectrometry ,01 natural sciences ,0104 chemical sciences ,Fuel Technology ,Geochemistry and Petrology ,Ionization ,Environmental science - Abstract
The review discusses the achievements of the last 5 years in the field of using mass spectrometry for the analysis of crude oils and some oil refining products. The presented materials are systematized according to properties of the analyzed compounds and ionization techniques used. The capabilities and disadvantages of existing approaches are discussed.
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- 2019
43. AVALIAÇÃO DA EXTENSÃO DA BIODEGRADAÇÃO DE PETRÓLEOS BRASILEIROS COM ÊNFASE NOS N-ALQUILCICLOHEXANOS
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Georgiana Feitosa da Cruz, Laercio Lopes Martins, Marcos A. Pudenzi, Lívia Carvalho Santos, and Marcos N. Eberlin
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petroleum ,lcsh:Chemistry ,lcsh:QD1-999 ,General Chemistry ,GC-MS ,biodegradation ,petroleomics ,n-alkylcyclohexanes - Abstract
The n-alkylcyclohexanes are poorly evaluated in biodegradation studies of Brazilian petroleum samples. In this context, this work aimed to use the homologue series of alkylcyclohexanes to assess extend of biodegradation of 26 petroleum samples from five Brazilian sedimentary basins, analyzed by gas chromatography coupled to mass spectrometry. The n-alkylcyclohexanes compounds were detected in all samples, with a distribution similar to the n-alkane profile, in which their abundance decreasing with increasing of the biodegradation extent. Based on this, it was suggested the use of the new parameter H30/DC together with the H30/AC already proposed, calculated by the ratio between C30 hopane to the dodecyl-cyclohexane, to assess biodegradation level according Peter and Moldowan scale (PM scale). In addition, it was observed an increasing in the relative abundance of DBE 2 from class O2, analyzed by ESI(-) FT-ICR MS, mainly due to the formation of monocyclic acids with biodegradation, which correlates with the decrease of n-alkylcyclohexanes, a possible precursor of these acids.
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- 2019
44. Modeling the molecular composition of vacuum residue from oil sand bitumen
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Anton Alvarez-Majmutov, Rafal Gieleciak, and Jinwen Chen
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Residue (complex analysis) ,Materials science ,020209 energy ,General Chemical Engineering ,Organic Chemistry ,Energy Engineering and Power Technology ,Petroleomics ,Thermodynamics ,Fraction (chemistry) ,02 engineering and technology ,chemistry.chemical_compound ,Cracking ,Fuel Technology ,020401 chemical engineering ,chemistry ,Asphalt ,0202 electrical engineering, electronic engineering, information engineering ,Petroleum ,Oil sands ,0204 chemical engineering ,Asphaltene - Abstract
Vacuum residue is the most diverse and structurally complex fraction of petroleum. In this work, we develop a representation of the molecular composition of this petroleum fraction. The underlying assumption is that vacuum residue is a continuum in molecular structure that can be described using probability distribution functions. The structural definition of SARA classes (saturates, aromatics, resins, and asphaltenes) is formulated in consistency with recent findings in petroleomics and the chemistry of thermal cracking or conversion. Island- and archipelago-type structures are considered in the representation of resins and asphaltenes. The systematic assembly of residue molecules is executed using stochastic algorithms. The model is implemented with good results in simulating a vacuum residue from oil sand bitumen. The simulation allows visualization of detailed molecular distributions in vacuum residue and its SARA fractions. The model also gives acceptable predictions for the properties of the maltene and asphaltene fractions of the residue sample.
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- 2019
45. Mass-Remainder Analysis (MARA): An Improved Method for Elemental Composition Assignment in Petroleomics
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Tibor Nagy, Miklós Zsuga, Ákos Kuki, Miklós Nagy, and Sándor Kéki
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Spectrometry, Mass, Electrospray Ionization ,Resolution (mass spectrometry) ,Chemistry ,010401 analytical chemistry ,Analytical chemistry ,Petroleomics ,010402 general chemistry ,01 natural sciences ,Fourier transform ion cyclotron resonance ,0104 chemical sciences ,Analytical Chemistry ,Mass ,Petroleum ,Mass spectrum ,Monoisotopic mass ,Remainder ,Chemical composition - Abstract
Data processing and visualization methods have an important role in the mass spectrometric study of crude oils and other natural samples. The recently invented data mining procedure, Mass-Remainder Analysis (MARA), was further developed for use in petroleomics. MARA is based on the calculation of the remainder after dividing by the exact mass of a base unit, in petroleomics by the mass of the CH2 group. The two key steps in the MARA algorithm are the separation of the monoisotopic peaks from the other isotopic peaks and the subsequent intensity correction. The effectiveness of our MARA method was demonstrated on the analysis of lubricating mineral oil and crude oil samples by ultra-high-resolution Fourier transform ion cyclotron resonance mass spectrometry experiments. MARA is able to handle a huge portion of the overlapped peaks even in a moderate resolution mass spectrum. With use of MARA, effective chemical composition assignment and visual representation were achieved for complex mass spectra recorded...
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- 2019
46. Profiling organic acids in produced water samples using vacuum-assisted sorbent extraction and gas chromatography coupled to Fourier transform Orbitrap mass spectrometry.
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Crucello, Juliana, Medeiros Junior, Iris, Mesquita de Carvalho, Rogerio, and Wang Hantao, Leandro
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- *
OIL field brines , *ORGANIC acids , *GAS well drilling , *MASS spectrometry , *GAS chromatography , *LIQUID-liquid extraction - Abstract
[Display omitted] • Vacuum assisted extraction was used to extract naphthenic acids from produced water. • Microwave assisted methylation of acids was performed in-sample. • Group-type analysis was performed by using the accurate mass and isotope patterns. In this article, we describe the preliminary findings obtained with headspace vacuum-assisted sorbent extraction (VASE) as an alternative for sample preparation in the analysis of organic acids in produced water (PW). VASE is a headspace technique that combines the use of high-capacity sorbent traps and low-pressure conditions. Method development included extraction parameters and thermal desorption conditions. Multivariate optimization using design of experiments (DOE) was performed for variable screening and method optimization. A microwave-assisted derivatization protocol was proposed to convert the organic acids into its corresponding methyl esters (ME). The reaction was conducted in-sample prior to VASE extraction, and had the advantage of dismissing the use of organic solvents. The isolated fraction was analyzed by gas chromatography coupled to high resolution mass spectrometry (GC-HRMS). Quantitative analysis exhibited a linear range from 1 to 100 µg L-1. The reported detection limits ranged from 0.001 to 0.070 µg L-1 using the model acids. The method was successfully applied for qualitative analysis of PW samples. It was possible to detect important classes, such as hydrocarbons, oxygen- and nitrogen- containing compounds. Several NAs species with different double-bond equivalent (DBE) values and carbon numbers could be found in both samples. The greenness of the analytical method was also evaluated, exhibiting better environmental metrics when compared with traditional liquid–liquid extraction. [ABSTRACT FROM AUTHOR]
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- 2022
- Full Text
- View/download PDF
47. From High- to Super-resolution Mass Spectrometry
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Yury O. Tsybin
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Extended bottom-up proteomics ,Filter diagonalization method (fdm) ,Fourier transform mass spectrometry (ftms) ,Middle-down proteomics ,Petroleomics ,Resolution ,Chemistry ,QD1-999 - Abstract
High-resolution mass spectrometry (MS) is indispensable for the molecular-level analysis of biological and environmental samples with great intra- and inter-molecular complexity. Here, we summarize developments in Fourier transform mass spectrometry (FTMS), the flagship of high-resolution MS techniques, accomplished in our laboratory. Particularly, we describe the recent and envisioned progress in structural analysis of: i) isolated large proteins and their simple mixtures, with a focus on monoclonal antibodies, via top–down, middle–down, and extended bottom–up mass spectrometry; ii) complex protein mixtures and proteomes via extended bottom–up proteomics; and iii) crude oil fractions and similar complex molecular mixtures. Despite the unequivocal success in molecular structural analysis, the demonstrated results clearly indicate that the compromise between MS acquisition speed (throughput) and achievable resolution level inhibits further advances of MS applications in the areas related to life, environmental, and material sciences. To further advance beyond state-of-the-art FTMS capabilities in these areas, we present the technique of super-resolution mass spectrometry that has been pioneered by our laboratory.
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- 2014
- Full Text
- View/download PDF
48. Petroleômica
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Pereira, Rosana Cardoso Lopes, 1959, Eberlin, Marcos Nogueira, 1959, Santos Neto, Eugenio Vaz dos, Penteado, Henrique Luiz de Barros, Scofield, Arthur de Lemos, Marsaioli, Anita Jocelyne, Arruda, Marco Aurelio Zezzi, Universidade Estadual de Campinas. Instituto de Química, Programa de Pós-Graduação em Química, and UNIVERSIDADE ESTADUAL DE CAMPINAS
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Petróleo ,Petroleomics ,Petroleum ,FT-ICR MS ,Naphthenic acids ,Ácidos naftênicos ,Petroleômica ,Óleo cru ,Crude oil - Abstract
Orientadores: Marcos Nogueira Eberlin, Eugenio Vaz dos Santos Neto Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Química Resumo: Este trabalho consistiu na aplicação de tecnologia que se encontra hoje na vanguarda do conhecimento: a Petroleômica via ESI FT-ICR MS, com o objetivo de caracterizar as mais diversas classes de compostos polares ácidos presentes em amostras representativas de óleos de bacias brasileiras. O propósito ambicioso foi o de focalizar aspectos relacionados à toda cadeia de valor da indústria do petróleo, desde a geração do óleo até o seu refino, visando contribuir para novos estudos de interesse às atividades de upstream e downstream da PETROBRAS e, principalmente, fomentar a integração dos conhecimentos das diferentes áreas, o que contribuirá para ganhos de produtividade da empresa. A técnica ESI FT-ICR-MS mostrou-se uma técnica rápida e adequada para acompanhar as alterações verificadas na composição de amostras de petróleo, fornecendo subsídios a partir de uma caracterização única, para estudos diversos, abrangendo toda a cadeia de valor da indústria do petróleo. As alterações composicionais de óleos e extratos obtidos em experimentos de maturação artificial por hidropirólise de matéria orgânica dos tipos I e III foram avaliadas, evidenciando o potencial da técnica para utilização em estudos cinéticos. O estudo de biodegradação utilizando trinta amostras de óleos da Bacia Potiguar evidenciou que a técnica é sensível as variações de composição dos compostos polares que ocorrem em função do processo de biodegradação, e as amostras puderam ser agrupadas de acordo com o grau de biodegradação através da utilização de ferramentas quimiométricas (PCA). A partir dos dados de caracterização obtidos por ESI FT-ICR MS, foi possível agregar informações úteis para o entendimento de comportamentos diferenciados frente à tendência de formação de emulsão/gel durante a produção e frente à corrosão durante o refino Abstract: This work focuses on the application of a technology that is cutting edge: Petroleomics by ESI FT-ICR MS with the goal of characterizing the large variety of acidic polar compound classes present in representative petroleum samples from Brazilian basins. The ambitious proposal was to focus on aspects related to the whole petroleum industry chain, since crude oil generation up to its processing in refinery units, to contribute to state-of-the-art studies of interest to upstream and downstream activities in PETROBRAS and mostly to encourage the knowledge integration, i.e. to form or blend the information into a whole, to UNITE, accessing high levels of productivity. The ESI FT-ICR MS technique exhibits characteristics like fast response, resolution, selectivity and sensibility, which make it suitable to monitor the changes in composition of petroleum samples and because of its unique and comprehensive characterization attained, to help different studies in the whole petroleum industry chain. The compositional alteration observed in extracts and oils during artificial maturation experiments by hydrouspyrolysis of organic matter types I and III were evaluated showing the potential of the technique to kinetic studies. Biodegradation studies were performed on 30 petroleum samples from Potiguar Basin and the results showed that the technique is sensitive to the variations on the composition of the polar compounds that occur as a result of the biodegradation process, and additionally, that the samples can be grouped according to their biodegradation level by the use of chimiometric tools (PCA). Also from the characterization data from ESI FT-ICR MS analysis it was shown that very useful information can be provided to better understand the differences in the rheological and corrosion behaviors of petroleum samples Doutorado Química Analítica Doutora em Ciências
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- 2021
49. Caracterização de óleos vegetais e petróleo por espectrometria de massas em condições ambiente e com alta exatidão e resolução
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Simas, Rosineide Costa, Eberlin, Marcos Nogueira, 1959, Sabino, Adão Aparecido, Santos Neto, Eugenio Vaz dos, Koike, Luzia, Cadore, Solange, Universidade Estadual de Campinas. Instituto de Química, Programa de Pós-Graduação em Ciências, and UNIVERSIDADE ESTADUAL DE CAMPINAS
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Petroleomics ,Ambient ionization ,Polar compounds ,Triglicerídeos ,Triacylglycerols ,Ionização ambiente ,Compostos polares ,Petroleômica - Abstract
Orientador: Marcos Nogueira Eberlin Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Química Resumo: A caracterização química de óleos de forma rápida, eficiente e com mínimo preparo de amostras é um desafio para a química analítica moderna. Este estudo abrangeu a caracterização química de 15 amostras de óleos vegetais e 6 amostras de petróleo, e demonstrou a versatilidade da técnica de espectrometria de massas (MS) nesta área. A caracterização de óleos vegetais foi feita por uma técnica de ionização ambiente desenvolvida no Brasil, denominada Easy Ambient Sonic-Spray Ionization (EASI) e utilizando como analisador de massas um equipamento monoquadrupolar, que possui resolução unitária. Foi obtido, para os óleos vegetais, a sua composição de triacilglicerídeos (TAG), ácidos graxos livres e hidroperóxidos utilizando apenas uma gota de óleo e nenhum preparo de amostra. A análise direta de óleos vegetais possibilitou ainda propor um método quantitativo por EASI-MS para determinação do teor de triacilglicerídeos, que demonstrou concordância com os métodos de referência. Já a caracterização do petróleo empregou a altíssima exatidão e resolução da espectrometria de massas por ressonância ciclotrônica de íons com transformada de Fourier, Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) com as técnicas de ionização EASI e Electrospray (ESI). O presente trabalho representou ainda a primeira tese de doutorado no Brasil em petroleômica, descrevendo um método de análise que dispensa uma série de procedimentos analíticos dispendiosos e demorados, de maneira a conferir um alto grau de refinamento e desempenho à análise de petróleo. Foram estudados os compostos polares do petróleo que contêm os heteroátomos nitrogênio (N), enxofre (S) e oxigênio (O) na sua composição, sendo possível caracterizá-los por distribuição em porcentagem de classes de heteroátomos, número de carbonos e insaturações por double bond equivalents (DBE). Foi apresentada uma proposta de estudo de precisão para a metodologia de petroleômica-MS por meio da estimativa de repetitividade e reprodutibilidade, além do estudo comparativo de eficiência das técnicas de ionização ESI e EASI Abstract: The chemical characterization of oils in a fast way and with minimal sample preparation is a challenge for modern analytical chemistry. The present study comprised the chemistry characterization of 15 vegetal oil samples and 6 samples of petroleum, demonstrating the versatility of the mass spectrometry (MS) technique in this area. Vegetal oils characterization was performed by an ambient ionization technique developed in Brazil, named Easy Ambient Sonic-Spray Ionization (EASI), and using a monoquadrupole mass analyzer with unitary resolution. EASI-MS detected for vegetable oils the composition of triacylglycerols (TAG), free fat acids and hydroperoxides using only one drop of oil and without sample preparation. The direct analysis provided by EASI-MS allowed us to propose also a quantitative method based on EASI MS data to determine the level of triacylglycerols of the vegetal oils. This method was in agreement with reference methods. For petroleum characterization, we used ultra-high accuracy and resolution of the Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) with EASI and electrospray (ESI) ionization. The present work describes results from the first doctorate thesis in Brazil dealing with petroleomic MS, a method of analysis that precludes a series of expensive and time-consuming analytical procedures and that can confer a high degree of refinement and performance to petroleum analysis. We have studied polar components of the petroleum containing nitrogen (N), sulphur (S) and oxygen (O) as heteroatoms in their composition. These components were classified according to the percentage distribution of heteroatoms, carbon number and unsaturations, as well as double bond equivalent (DBE). The study also evaluated precision for petroleomic MS via estimations of repeatability and reproducibility. The efficiencies of ESI and EASI for the petroleum analysis were also compared Doutorado Química Analítica Doutor em Ciências
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- 2021
50. Profiling naphthenic acids in produced water using hollow fiber liquid-phase microextraction combined with gas chromatography coupled to Fourier transform Orbitrap mass spectrometry
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Nathália de Aguiar Porto, Juliana Crucello, Rogério M. Carvalho, Iris Medeiros Junior, Roselaine Facanali, and Leandro Wang Hantao
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Chemical ionization ,Chromatography ,Fourier Analysis ,Chemistry ,Liquid Phase Microextraction ,Organic Chemistry ,Carboxylic Acids ,Petroleomics ,Water ,General Medicine ,Orbitrap ,Mass spectrometry ,Biochemistry ,Gas Chromatography-Mass Spectrometry ,Mass Spectrometry ,Analytical Chemistry ,law.invention ,chemistry.chemical_compound ,law ,Sample preparation ,Gas chromatography ,Monoisotopic mass ,Derivatization - Abstract
In this study, we describe the development of an analytical method to profile naphthenic acids (NAs) from produced water (PW). The NAs were isolated by hollow fiber liquid-phase microextraction (HF-LPME). A microwave-assisted methylation method was used to convert the free acids into its corresponding naphthenic methyl esters (NAMEs). The best reaction conditions were ascertained using central composite design. The optimized sample preparation method exhibited an improved analytical eco-scale value (80 vs. 61) compared to conventional liquid-liquid extraction. Although the primary goal was qualitative analysis of NAMEs (e.g., group-type separation) in produced water, the quantitative performance was also evaluated for future investigations. The instrumental detection and quantification limits were 0.10 ng mL−1 and 0.16 ng mL−1, respectively, using full spectrum data acquisition. The accuracy and precision of the proposed method ranged from 90.4 to 96.6 % and 3.3 to 13.1 %, respectively, using matrix-matched working solutions (0.1, 0.5, and 1.0 µg mL−1). The monoisotopic masses of the adduct ions ([M+H]+) and its corresponding fine isotopic patterns were used to determine the elemental composition of the NAMEs in the PW samples. Qualitative analysis indicated the O2 class as the predominant class in all samples with carbon numbers ranging from C5 to C19 and double bond equivalent (DBE) values of 1 to 8. Additional classes of polar compounds, i.e., O3, O4 and nitrogen-containing classes, are reported for the first time by gas chromatography coupled to Fourier transform Orbitrap mass spectrometry and chemical ionization.
- Published
- 2021
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