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Cropping systems in semiarid regions have frequently relied on continuous tillage and irrigation, but declining groundwater resources have prompted a greater focus on conservation practices to improve soil health and water storage. We compared soil health responses from cotton production systems in semiarid, coarse-textured soils with different crop management strategies under high or low irrigation levels. Management systems included continuous cotton with conventional tillage (CCCT) compared to no-till cotton with a rye cover crop (NTCR) and no-till cotton with a wheat-fallow rotation (NTCW), including high or low irrigation zones within each system. Samples were collected annually from two bulk soil depths (0–10 cm and 10–20 cm) and root-associated soils 7 years after systems were established and continued for 2 years. We found that cropping system, but not irrigation level, altered soil microbial communities and other soil health indicators. Despite variation between study years and sampling zones, the conservation systems had greater soil microbial community size via ester-linked fatty acid methyl ester (EL-FAME or FAME) analysis, extracellular enzyme activities, and soil organic matter than the CCCT system. The NTCW system also had greater arbuscular mycorrhizal fungi FAME abundance. Our study suggests that no-till and conservation strategies such as cover cropping and rotation can improve biological soil health indicators in these sandy semiarid soils even with limited irrigation. [ABSTRACT FROM AUTHOR]