69 results on '"Perttu Lantto"'
Search Results
2. Chemical shift extremum of 129Xe(aq) reveals details of hydrophobic solvation
- Author
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Petri Peuravaara, Jouni Karjalainen, Jianfeng Zhu, Jiří Mareš, Perttu Lantto, and Juha Vaara
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Medicine ,Science - Abstract
Abstract The 129Xe chemical shift in an aqueous solution exhibits a non-monotonic temperature dependence, featuring a maximum at 311 K. This is in contrast to most liquids, where the monotonic decrease of the shift follows that of liquid density. In particular, the shift maximum in water occurs at a higher temperature than that of the maximum density. We replicate this behaviour qualitatively via a molecular dynamics simulation and computing the 129Xe chemical shift for snapshots of the simulation trajectory. We also construct a semianalytical model, in which the Xe atom occupies a cavity constituted by a spherical water shell, consisting of an even distribution of solvent molecules. The temperature dependence of the shift is seen to result from a product of the decreasing local water density and an increasing term corresponding to the energetics of the Xe-H2O collisions. The latter moves the chemical shift maximum up in temperature, as compared to the density maximum. In water, the computed temperature of the shift maximum is found to be sensitive to both the details of the binary chemical shift function and the coordination number. This work suggests that, material parameters allowing, the maximum should be exhibited by other liquids, too.
- Published
- 2018
- Full Text
- View/download PDF
3. Tuning Nuclear Quadrupole Resonance: A Novel Approach for the Design of Frequency-Selective MRI Contrast Agents
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Christian Gösweiner, Perttu Lantto, Roland Fischer, Carina Sampl, Evrim Umut, Per-Olof Westlund, Danuta Kruk, Markus Bödenler, Stefan Spirk, Andreas Petrovič, and Hermann Scharfetter
- Subjects
Physics ,QC1-999 - Abstract
The interaction between water protons and suitable quadrupolar nuclei (QN) can lead to quadrupole relaxation enhancement (QRE) of proton spins, provided the resonance condition between both spin transitions is fulfilled. This effect could be utilized as a frequency selective mechanism in novel, responsive T_{1} shortening contrast agents (CAs) for magnetic resonance imaging (MRI). In particular, the proposed contrast mechanism depends on the applied external flux density—a property that can be exploited by special field-cycling MRI scanners. For the design of efficient CA molecules, exhibiting narrow and pronounced peaks in the proton T_{1} relaxation dispersion, the nuclear quadrupole resonance (NQR) properties, as well as the spin dynamics of the system QN-^{1}H, have to be well understood and characterized for the compounds in question. In particular, the energy-level structure of the QN is a central determinant for the static flux densities at which the contrast enhancement appears. The energy levels depend both on the QN and the electronic environment, i.e., the chemical bonding structure in the CA molecule. In this work, the NQR properties of a family of promising organometallic compounds containing ^{209}Bi as QN have been characterized. Important factors like temperature, chemical structure, and chemical environment have been considered by NQR spectroscopy and ab initio quantum chemistry calculations. The investigated Bi-aryl compounds turned out to fulfill several crucial requirements: NQR transition frequency range applicable to clinical 1.5- and 3 T MRI systems, low temperature dependency, low toxicity, and tunability in frequency by chemical modification.
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- 2018
- Full Text
- View/download PDF
4. Unexpected NMR shieldings of sp- and sp2-hybridized carbon atoms in graphyne systems
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Petr Štěpánek and Perttu Lantto
- Subjects
General Physics and Astronomy ,Physical and Theoretical Chemistry - Abstract
The NMR chemical shifts of carbon in different graphynes strongly depend on the structure, challenging common rules for chemical shifts in organic molecules.
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- 2022
5. Encapsulation of xenon by bridged resorcinarene cages with high 129Xe NMR chemical shift and efficient exchange dynamics
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Sanna Komulainen, P. U. Ashvin Iresh Fernando, Jiří Mareš, Anne Selent, Roya Khalili, Paul T. Cesana, Andreas Ebeling, Anu M. Kantola, Ngong Kodiah Beyeh, Kari Rissanen, Brenton DeBoef, Perttu Lantto, and Ville-Veikko Telkki
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General Engineering ,General Physics and Astronomy ,ksenon ,General Chemistry ,biosensors ,laskennallinen kemia ,biosensorit ,aliphatically bridged resorcinarenes ,molecular dynamic simulations ,General Energy ,129Xe HyperCEST MRI ,supramolekulaarinen kemia ,piperazine-bridged resorcinarenes ,General Materials Science ,molekyylidynamiikka ,129Xe NMR ,supermolecules ,first principal modeling ,functionalized cages - Abstract
Functionalized cages encapsulating xenon atoms enable highly sensitive, background-free molecular imaging through a technique known as HyperCEST 129Xe MRI. Here, we introduce a class of potential biosensor cage structures based on two resorcinarene macrocycles bridged either by aliphatic carbon chains or piperazines. First-principles-based modeling predicts a high chemical shift (about 345 ppm) outside the typical experimental observation window for 129Xe encapsulated by the aliphatically bridged cage and two 129Xe resonances for the piperazine-bridged cages corresponding to single and double loading. Based on the computational predictions as well as 129Xe chemical exchange saturation transfer (CEST) and T2 relaxation nuclear magnetic resonance experiments, we confirm Xe encapsulation in the aliphatically bridged and double encapsulation in the piperazine-bridged resorcinarene in methanol. The cages show fast Xe exchange rates (12,000–49,000 s−1), resulting in a high CEST response regardless of the relatively low binding constant (0.09–3 M−1). peerReviewed
- Published
- 2023
6. Bi(III) Complexes Containing Dithiocarbamate Ligands: Synthesis, Structure Elucidation by X‐ray Diffraction, Solid‐State 13 C/ 15 N NMR, and DFT Calculations
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Perttu Lantto, Vasantha Gowda, Anna-Carin Larsson, Oleg N. Antzutkin, and Bipul Sarma
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Diffraction ,chemistry.chemical_classification ,Materials science ,010405 organic chemistry ,Solid-state ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,010402 general chemistry ,01 natural sciences ,3. Good health ,0104 chemical sciences ,Condensed Matter::Materials Science ,Crystallography ,chemistry ,Density functional calculation ,X-ray crystallography ,Density functional theory ,Physics::Chemical Physics ,Dithiocarbamate ,Spectroscopy - Abstract
We report on syntheses, characterisation by nuclear magnetic resonance (NMR) spectroscopy, X‐ray diffraction (XRD) measurements, and density functional theory (DFT) calculations of electronic/molec ...
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- 2020
7. Local structures of rare earth phosphate minerals by NMR
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Roya Khalili, Anna-Carin Larsson, Ville-Veikko Telkki, Perttu Lantto, and Anu M. Kantola
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Inorganic Chemistry ,Rare earth phosphate structure ,Materials Chemistry ,Ceramics and Composites ,Surface hydration ,Physical and Theoretical Chemistry ,DFT calculations ,Condensed Matter Physics ,31P solid state NMR ,Electronic, Optical and Magnetic Materials - Abstract
31P solid state NMR studies combined with DFT calculations were conducted over a chosen series of rare earth element phosphates (REEPO4s), selected on the basis of the size and magnetic properties of REEs (La, Sm, Lu and Yb). PXRD analysis revealed the presence of rhabdophane (La, Sm), monazite (La) and xenotime (Lu, Yb) phases of these phosphate compounds. The direct excitation and cross-polarization 31P NMR studies together with calculations confirmed the PXRD results for the abovementioned bulk structures, but also revealed presence of several local phosphorus environments on surfaces. NMR is sensitive to the atomic level local interactions, and we were able to show that the combination of experimental and theoretical NMR methods can provide information unavailable with other methods. Due to the distinct coordination of the water molecules to crystal surfaces with different Miller plane cleavages, we were able to identify from the NMR spectra the surface structures of the studied minerals. This adds to the knowledge of the bulk structures of REE phosphates and provides preliminary data for studies on coordination of various ligands on REE phosphate surfaces. This combination of experimental and computational methods can further be used for studies on surface chemistry, important for applications in catalysis and extraction of REEs from the minerals.
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- 2022
8. Hyper-CEST NMR of metal organic polyhedral cages reveals hidden diastereomers with diverse guest exchange kinetics
- Author
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Jabadurai Jayapaul, Sanna Komulainen, Vladimir V. Zhivonitko, Jiří Mareš, Chandan Giri, Kari Rissanen, Perttu Lantto, Ville-Veikko Telkki, and Leif Schröder
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Multidisciplinary ,Magnetic Resonance Spectroscopy ,Chemical physics ,Physics ,General Physics and Astronomy ,General Chemistry ,Self-assembly ,organometalliyhdisteet ,Magnetic Resonance Imaging ,General Biochemistry, Genetics and Molecular Biology ,Kinetics ,nanorakenteet ,Organometallic chemistry ,Metals ,supramolekulaarinen kemia ,NMR-spektroskopia ,Solution-state NMR ,Molecular self-assembly - Abstract
Guest capture and release are important properties of self-assembling nanostructures. Over time, a significant fraction of guests might engage in short-lived states with different symmetry and stereoselectivity and transit frequently between multiple environments, thereby escaping common spectroscopy techniques. Here, we investigate the cavity of an iron-based metal organic polyhedron (Fe-MOP) using spin-hyperpolarized 129Xe Chemical Exchange Saturation Transfer (hyper-CEST) NMR. We report strong signals unknown from previous studies that persist under different perturbations. On-the-fly delivery of hyperpolarized gas yields CEST signatures that reflect different Xe exchange kinetics from multiple environments. Dilute pools with ~ 104-fold lower spin numbers than reported for directly detected hyperpolarized nuclei are readily detected due to efficient guest turnover. The system is further probed by instantaneous and medium timescale perturbations. Computational modeling indicates that these signals originate likely from Xe bound to three Fe-MOP diastereomers (T, C3, S4). The symmetry thus induces steric effects with aperture size changes that tunes selective spin manipulation as it is employed in CEST MRI agents and, potentially, impacts other processes occurring on the millisecond time scale.
- Published
- 2021
9. Direct magnetic-field dependence of NMR chemical shift
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Ivo Heinmaa, Anu M. Kantola, Juha Vaara, Jukka Jokisaari, and Perttu Lantto
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Materials science ,010304 chemical physics ,Field (physics) ,Chemical shift ,General Physics and Astronomy ,010402 general chemistry ,7. Clean energy ,01 natural sciences ,0104 chemical sciences ,Magnetic field ,Atomic orbital ,0103 physical sciences ,Electromagnetic shielding ,Diamagnetism ,Physical and Theoretical Chemistry ,Atomic physics ,Excitation ,Order of magnitude - Abstract
Nuclear shielding and chemical shift are considered independent of the magnetic-field strength. Ramsey proposed on theoretical grounds in 1970 that this may not be valid for heavy nuclei. Here we present experimental evidence for the direct field dependence of shielding, using 59Co shielding in Co(acac)3 [tris(acetylacetonate)cobalt(III)] as an example. We carry out NMR experiments in four field strengths for this low-spin diamagnetic Co(III) complex, which features a very large and negative nuclear shielding constant of the central Co nucleus. This is due to a magnetically accessible, low-energy eg ← t2g orbital excitation of the d6 system. The experiments result in temperature-dependent magnetic-field dependence of −5.7 to −5.2 ppb T−2 of the 59Co shielding constant, arising from the direct modification of the electron cloud of the complex by the field. First-principles multiconfigurational non-linear response theory calculations verify the sign and order of magnitude of the experimental results.
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- 2020
10. Chemical shift extremum of 129Xe(aq) reveals details of hydrophobic solvation
- Author
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Jiří Mareš, Perttu Lantto, Juha Vaara, Jouni Karjalainen, Jianfeng Zhu, and Petri Peuravaara
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Work (thermodynamics) ,Multidisciplinary ,Materials science ,Aqueous solution ,010304 chemical physics ,Coordination number ,Science ,Solvation ,010402 general chemistry ,01 natural sciences ,Article ,0104 chemical sciences ,Molecular dynamics ,Chemical physics ,0103 physical sciences ,Atom ,Maximum density ,Molecule ,Medicine - Abstract
The 129Xe chemical shift in an aqueous solution exhibits a non-monotonic temperature dependence, featuring a maximum at 311 K. This is in contrast to most liquids, where the monotonic decrease of the shift follows that of liquid density. In particular, the shift maximum in water occurs at a higher temperature than that of the maximum density. We replicate this behaviour qualitatively via a molecular dynamics simulation and computing the 129Xe chemical shift for snapshots of the simulation trajectory. We also construct a semianalytical model, in which the Xe atom occupies a cavity constituted by a spherical water shell, consisting of an even distribution of solvent molecules. The temperature dependence of the shift is seen to result from a product of the decreasing local water density and an increasing term corresponding to the energetics of the Xe-H2O collisions. The latter moves the chemical shift maximum up in temperature, as compared to the density maximum. In water, the computed temperature of the shift maximum is found to be sensitive to both the details of the binary chemical shift function and the coordination number. This work suggests that, material parameters allowing, the maximum should be exhibited by other liquids, too.
- Published
- 2018
11. Structural insights into the polymorphism of bismuth(III) di-n-butyldithiocarbamate by X-ray diffraction, solid-state (13C/15N) CP-MAS NMR and DFT calculations
- Author
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Vasantha Gowda, Perttu Lantto, Risto S. Laitinen, Dinu Iuga, Bipul Sarma, Oleg N. Antzutkin, Anna-Carin Larsson, and Alexander V. Ivanov
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chemistry.chemical_classification ,010405 organic chemistry ,Supramolecular chemistry ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Bismuth ,Inorganic Chemistry ,NMR spectra database ,Crystallography ,chemistry ,X-ray crystallography ,Materials Chemistry ,Molecule ,Density functional theory ,Physical and Theoretical Chemistry ,Dithiocarbamate ,Conformational isomerism - Abstract
Two crystalline polymorphs of a binuclear tris(di-n-butyldithiocarbamato)bismuth(III) complex, I and II, with an empirical formula of [Bi{S2CN(n-C4H9)2}3] were synthesised and characterised by X-ray diffraction (XRD), solid-state NMR and density functional theory (DFT) calculations. At the supramolecular level, these mononuclear molecular units interact in pairs via secondary Bi⋯S bonds, yielding binuclear formations of [Bi2{S2CN(n-C4H9)2}6]. The polymorph I ( P 1 ¯ ) contains two isomeric non-centrosymmetric binuclear molecules of [Bi2{S2CN(n-C4H9)2}6], which are related to each other as conformers, therefore having four structurally inequivalent bismuth atoms and twelve inequivalent dithiocarbamate ligands. In contrast, the structurally simpler polymorph II ( P 2 1 / n ) exists as a single molecular form of the corresponding centrosymmetric binuclear formation, comprising two structurally equivalent bismuth atoms and three structurally different dithiocarbamate groups. The polymorphs I and II were found to be interconvertible by altering the solvent system during the recrystallisation process. Sun et al. (2012) has reported a crystalline form of the title compound which resembles, but is not identical with, polymorph II. Experimental solid-state 13C and 15N cross-polarisation (CP) magic-angle-spinning (MAS) NMR spectra of both polymorphs I and II were in accord with the direct structural data on these complexes. Assignments of the resonance lines in the solid-state 13C and 15N NMR spectra were assisted by chemical shift calculations of the crystals using periodic DFT.
- Published
- 2017
12. Clathrate Structure Determination by Combining Crystal Structure Prediction with Computational and Experimental 129Xe NMR Spectroscopy
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Peter J. Bygrave, Jonas Nyman, Jukka Jokisaari, Marek Ilczyszyn, Juho Roukala, Raija Oilunkaniemi, Risto S. Laitinen, Marcin Selent, Perttu Lantto, and Graeme M. Day
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Computational Chemistry | Hot Paper ,Clathrate hydrate ,chemistry.chemical_element ,Crystal structure ,010402 general chemistry ,01 natural sciences ,Catalysis ,crystal structure prediction ,Nuclear magnetic resonance ,Xenon ,Tensor ,density functional theory ,Full Paper ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,Full Papers ,first principles modelling ,computational chemistry ,0104 chemical sciences ,Crystal structure prediction ,NMR spectra database ,Chemical physics ,Xe NMR spectroscopy ,Density functional theory - Abstract
An approach is presented for the structure determination of clathrates using NMR spectroscopy of enclathrated xenon to select from a set of predicted crystal structures. Crystal structure prediction methods have been used to generate an ensemble of putative structures of o‐ and m‐fluorophenol, whose previously unknown clathrate structures have been studied by 129Xe NMR spectroscopy. The high sensitivity of the 129Xe chemical shift tensor to the chemical environment and shape of the crystalline cavity makes it ideal as a probe for porous materials. The experimental powder NMR spectra can be used to directly confirm or reject hypothetical crystal structures generated by computational prediction, whose chemical shift tensors have been simulated using density functional theory. For each fluorophenol isomer one predicted crystal structure was found, whose measured and computed chemical shift tensors agree within experimental and computational error margins and these are thus proposed as the true fluorophenol xenon clathrate structures.
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- 2017
13. Ratcheting rotation or speedy spinning: EPR and dynamics of Sc3C2@C80
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Perttu Lantto, Juha Vaara, Juho Roukala, Stefan Taubert, and Michal Straka
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Fullerene ,chemistry.chemical_element ,Trimer ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,7. Clean energy ,Molecular physics ,Catalysis ,law.invention ,Molecular dynamics ,law ,Quantum mechanics ,Atom ,Physics::Atomic and Molecular Clusters ,Materials Chemistry ,Endohedral fullerene ,Scandium ,Electron paramagnetic resonance ,Hyperfine structure ,Metals and Alloys ,General Chemistry ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry ,Ceramics and Composites ,0210 nano-technology - Abstract
Besides their technological applications, endohedral fullerenes provide ideal conditions for investigating molecular dynamics in restricted geometries. A representative of this class of systems, Sc3C2@C80 displays complex intramolecular dynamics. The motion of the 45Sc trimer has a remarkable effect on its electron paramagnetic resonance (EPR) spectrum, which changes from a symmetric 22-peak pattern at high temperature to a single broad lineshape at low temperature. The scandium trimer consists of two equivalent and one inequivalent metal atom, due to the carbon dimer rocking through the Sc3 triangle. We demonstrate through first-principles molecular dynamics (MD), EPR parameter tensor averaging, and spectral modelling that, at high temperatures, three-dimensional movement of the enclosed Sc3C2 moiety takes place, which renders the metal centers equivalent and their magnetic parameters effectively isotropic. In contrast, at low temperatures the dynamics becomes restricted to two dimensions within the equatorial belt of the Ih symmetric C80 host fullerene. This restores the inequivalence of the scandium centers and causes their anisotropic hyperfine couplings to broaden the experimental spectrum.
- Published
- 2017
14. Orienting spins in dually doped monolayer MoS2: from one-sided to double-sided doping
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Marko Huttula, Perttu Lantto, Jarkko Vähäkangas, Juha Vaara, and Wei Cao
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Materials science ,Spins ,Condensed matter physics ,Doping ,Metals and Alloys ,02 engineering and technology ,General Chemistry ,Electron ,021001 nanoscience & nanotechnology ,01 natural sciences ,Catalysis ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Condensed Matter::Materials Science ,Impurity ,One sided ,Magnet ,0103 physical sciences ,Monolayer ,Materials Chemistry ,Ceramics and Composites ,Slab ,Condensed Matter::Strongly Correlated Electrons ,010306 general physics ,0210 nano-technology - Abstract
Electron spins of the doped monolayer MoS2 were aligned by placing two magnetic impurities at sulfur vacancies, both on the same side and different sides of the slab. Origins of the calculated magnetisms are beyond most conventional physical models, yet interactions of single-molecule magnets are tentatively proposed.
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- 2017
15. Inside information on xenon adsorption in porous organic cages by NMR
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Daniel Holden, Muhammad Asadullah Javed, Tom Hasell, Linjiang Chen, Sanna Komulainen, Perttu Lantto, Juho Roukala, Andrew I. Cooper, Vladimir V. Zhivonitko, and Ville-Veikko Telkki
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Chemistry ,Diffusion ,Analytical chemistry ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Spectral line ,0104 chemical sciences ,Crystal ,Adsorption ,Xenon ,0210 nano-technology ,Cage ,Porosity ,Saturation (chemistry) - Abstract
In-depth experimental and computational 129Xe NMR analysis of extraordinarily efficient adsorption of xenon in a porous organic cage., A solid porous molecular crystal formed from an organic cage, CC3, has unprecedented performance for the separation of rare gases. Here, xenon was used as an internal reporter providing extraordinarily versatile information about the gas adsorption phenomena in the cage and window cavities of the material. 129Xe NMR measurements combined with state-of-the-art quantum chemical calculations allowed the determination of the occupancies of the cavities, binding constants, thermodynamic parameters as well as the exchange rates of Xe between the cavities. Chemical exchange saturation transfer (CEST) experiments revealed a minor window cavity site with a significantly lower exchange rate than other sites. Diffusion measurements showed significantly reduced mobility of xenon with loading. 129Xe spectra also revealed that the cage cavity sites are preferred at lower loading levels, due to more favourable binding, whereas window sites come to dominate closer to saturation because of their greater prevalence.
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- 2017
16. NMR relaxation and modelling study of the dynamics of SF
- Author
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Pär, Håkansson, Muhammad Asadullah, Javed, Sanna, Komulainen, Linjiang, Chen, Daniel, Holden, Tom, Hasell, Andrew, Cooper, Perttu, Lantto, and Ville-Veikko, Telkki
- Abstract
The porous solid formed from organic CC3 cage molecules has exceptional performance for rare gas separation. NMR spectroscopy provides a way to reveal the dynamical details by using experimental relaxation and diffusion measurements. Here, we investigated T
- Published
- 2019
17. Structure Elucidation of an Yttrium Diethyldithiocarbamato‐Phenanthroline Complex by X‐ray Crystallography, Solid‐State NMR, and ab‐initio Quantum Chemical Calculations
- Author
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Vasantha Gowda, Anna-Carin Larsson, Bipul Sarma, Perttu Lantto, Oleg N. Antzutkin, Ville-Veikko Telkki, and Sven Öberg
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Quantum chemical ,010405 organic chemistry ,Phenanthroline ,Ab initio ,chemistry.chemical_element ,Yttrium ,Electronic structure ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,3. Good health ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,Solid-state nuclear magnetic resonance ,X-ray crystallography ,Analysis method - Abstract
We present a structural analysis method for molecular and electronic structure of yttrium diethyldithiocarbamato-phenanthroline complex {[Y(S2CNR2)3PHEN] with R = C2H5 and PHEN = 1,10-phenanthrolin ...
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- 2016
18. DFT calculations in the assignment of solid-state NMR and crystal structure elucidation of a lanthanum(<scp>iii</scp>) complex with dithiocarbamate and phenanthroline
- Author
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Perttu Lantto, Vasantha Gowda, Ville-Veikko Telkki, Risto S. Laitinen, Anna-Carin Larsson, and Oleg N. Antzutkin
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chemistry.chemical_classification ,010304 chemical physics ,Chemistry ,Chemical shift ,Crystal structure ,Triclinic crystal system ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,NMR spectra database ,Crystallography ,Solid-state nuclear magnetic resonance ,0103 physical sciences ,Density functional theory ,Dithiocarbamate ,Natural bond orbital - Abstract
The molecular, crystal, and electronic structures as well as spectroscopic properties of a mononuclear heteroleptic lanthanum(iii) complex with diethyldithiocarbamate and 1,10-phenanthroline ligands (3 : 1) were studied by solid-state 13C and 15N cross-polarisation (CP) magic-angle-spinning (MAS) NMR, X-ray diffraction (XRD), and first principles density functional theory (DFT) calculations. A substantially different powder XRD pattern and 13C and 15N CP-MAS NMR spectra indicated that the title compound is not isostructural to the previously reported analogous rare earth complexes with the space group P21/n. Both 13C and 15N CP-MAS NMR revealed the presence of six structurally different dithiocarbamate groups in the asymmetric unit cell, implying a non-centrosymmetric packing arrangement of molecules. This was supported by single-crystal X-ray crystallography showing that the title compound crystallised in the triclinic space group P1[combining macron]. In addition, the crystal structure also revealed that one of the dithiocarbamate ligands has a conformational disorder. NMR chemical shift calculations employing the periodic gauge including projector augmented wave (GIPAW) approach supported the assignment of the experimental 13C and 15N NMR spectra. However, the best correspondences were obtained with the structure where the atomic positions in the X-ray unit cell were optimised at the DFT level. The roles of the scalar and spin-orbit relativistic effects on NMR shielding were investigated using the zeroth-order regular approximation (ZORA) method with the outcome that already the scalar relativistic level qualitatively reproduces the experimental chemical shifts. The electronic properties of the complex were evaluated based on the results of the natural bond orbital (NBO) and topology of the electron density analyses. Overall, we apply a multidisciplinary approach acquiring comprehensive information about the solid-state structure and the metal-ligand bonding of the heteroleptic lanthanum complex.
- Published
- 2016
19. Tuning Nuclear Quadrupole Resonance: A Novel Approach for the Design of Frequency-Selective MRI Contrast Agents
- Author
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Perttu Lantto, Christian Gösweiner, Markus Bödenler, Danuta Kruk, Stefan Spirk, Evrim Umut, Hermann Scharfetter, Per-Olof Westlund, Roland Fischer, Andreas Petrovic, and Carina Sampl
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Medical Physics ,Proton ,media_common.quotation_subject ,QC1-999 ,Nuclear Theory ,General Physics and Astronomy ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Nuclear magnetic resonance ,Contrast (vision) ,Fysik ,Physics::Atomic Physics ,Nuclear Experiment ,Spin (physics) ,media_common ,Physics ,Chemical Physics ,Spins ,Relaxation (NMR) ,Resonance ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Quadrupole ,Physical Sciences ,Interdisciplinary Physics ,Physics::Accelerator Physics ,Condensed Matter::Strongly Correlated Electrons ,0210 nano-technology ,Nuclear quadrupole resonance - Abstract
The interaction between water protons and suitable quadrupolar nuclei (QN) can lead to quadrupole relaxation enhancement (QRE) of proton spins, provided the resonance condition between both spin transitions is fulfilled. This effect could be utilized as a frequency selective mechanism in novel, responsive T1 shortening contrast agents (CAs) for magnetic resonance imaging (MRI). In particular, the proposed contrast mechanism depends on the applied external flux density—a property that can be exploited by special field-cycling MRI scanners. For the design of efficient CA molecules, exhibiting narrow and pronounced peaks in the proton T1 relaxation dispersion, the nuclear quadrupole resonance (NQR) properties, as well as the spin dynamics of the system QN−1H, have to be well understood and characterized for the compounds in question. In particular, the energy-level structure of the QN is a central determinant for the static flux densities at which the contrast enhancement appears. The energy levels depend both on the QN and the electronic environment, i.e., the chemical bonding structure in the CA molecule. In this work, the NQR properties of a family of promising organometallic compounds containing 209Bi as QN have been characterized. Important factors like temperature, chemical structure, and chemical environment have been considered by NQR spectroscopy and abinitio quantum chemistry calculations. The investigated Bi-aryl compounds turned out to fulfill several crucial requirements: NQR transition frequency range applicable to clinical 1.5- and 3T MRI systems, low temperature dependency, low toxicity, and tunability in frequency by chemical modification.
- Published
- 2018
20. Spin Doublet Point Defects in Graphenes: Predictions for ESR and NMR Spectral Parameters
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Jiří Mareš, Perttu Lantto, Juha Vaara, and Jarkko Vähäkangas
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Condensed matter physics ,Magnetic moment ,Graphene ,Magnetism ,Computer Science Applications ,law.invention ,Condensed Matter::Materials Science ,Paramagnetism ,chemistry.chemical_compound ,chemistry ,law ,Physics::Atomic and Molecular Clusters ,Graphane ,Condensed Matter::Strongly Correlated Electrons ,Density functional theory ,Physics::Chemical Physics ,Physical and Theoretical Chemistry ,Fluorographene ,Electron paramagnetic resonance - Abstract
An adatom on a graphene surface may carry a magnetic moment causing spin-half paramagnetism. This theoretically predicted phenomenon has recently also been experimentally verified. The measurements of defect-induced magnetism are mainly based on magnetometric techniques where artifacts such as environmental magnetic impurities are hard to rule out. Spectroscopic methods such as electron spin resonance (ESR) and paramagnetic nuclear magnetic resonance (pNMR) are conventionally used in the development of magnetic materials, e.g., to study paramagnetic centers. The present density functional theory study demonstrates with calculations of the ESR g-tensor and the hyperfine coupling tensors, as well as the pNMR shielding tensor, that these spectroscopies can be used to identify the paramagnetic centers in graphenes. The studied defects are hydrogen and fluorine adatoms on sp(2)-hybridized graphene, as well as hydrogen and fluorine vacancies in the sp(3)-hybridized graphane and fluorographene, respectively. The directly measurable ESR and pNMR parameters give insight into the electronic and atomic structures of these defects and may contribute to understanding carbon-based magnetism via the characterization of the defect centers. We show that missing hydrogen and fluorine atoms in the functionalized graphane and fluorographene, respectively, constitute sp(2)-defect centers, in which the magnetic resonance parameters are greatly enhanced. Slowly decaying adatom-induced magnetic resonance parameters with the distance from the sp(3)-defect, are found in pure graphene.
- Published
- 2015
21. Encapsulation of Xenon by a Self-Assembled Fe4L6 Metallosupramolecular Cage
- Author
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Ville-Veikko Telkki, Perttu Lantto, Chandan Giri, Kari Rissanen, Juho Roukala, and Jianfeng Zhu
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Xenon ,010405 organic chemistry ,Chemistry ,Chemical exchange ,chemistry.chemical_element ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Binding constant ,Catalysis ,0104 chemical sciences ,Self assembled ,Colloid and Surface Chemistry ,13. Climate action ,Computational chemistry ,Saturation transfer ,Chemical physics ,metallosupramolecular cages ,molecular encapsulation ,Cage ,Relativistic quantum chemistry ,Signal amplification ,ta116 - Abstract
We report (129)Xe NMR experiments showing that a Fe4L6 metallosupramolecular cage can encapsulate xenon in water with a binding constant of 16 M(-1). The observations pave the way for exploiting metallosupramolecular cages as economical means to extract rare gases as well as (129)Xe NMR-based bio-, pH, and temperature sensors. Xe in the Fe4L6 cage has an unusual chemical shift downfield from free Xe in water. The exchange rate between the encapsulated and free Xe was determined to be about 10 Hz, potentially allowing signal amplification via chemical exchange saturation transfer. Computational treatment showed that dynamical effects of Xe motion as well as relativistic effects have significant contributions to the chemical shift of Xe in the cage and enabled the replication of the observed linear temperature dependence of the shift.
- Published
- 2015
22. Xenon NMR of liquid crystals confined to cylindrical nanocavities: a simulation study
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Perttu Lantto, Michal Straka, Juha Vaara, and Jouni Karjalainen
- Subjects
Phase transition ,Chemistry ,Analytical chemistry ,General Physics and Astronomy ,chemistry.chemical_element ,Thermotropic crystal ,Molecular physics ,Xenon ,Liquid crystal ,Phase (matter) ,Electromagnetic shielding ,Physical and Theoretical Chemistry ,Anisotropy ,Cavity wall - Abstract
Applications of liquid crystals (LCs), such as smart windows and the ubiquitous display devices, are based on controlling the orientational and translational order in a small volume of LC medium. Hence, understanding the effects of confinement to the liquid crystal phase behaviour is essential. The NMR shielding of (129)Xe atoms dissolved in LCs constitutes a very sensitive probe to the details of LC environment. Linking the experimental results to microscopic phenomena calls for molecular simulations. In this work, the NMR shielding of atomic (129)Xe dissolved in a uniaxial thermotropic LC confined to nanosized cylindrical cavities is computed from coarse-grained (CG) isobaric Monte Carlo (MC) simulations with a quantum-chemically (QC) pre-parameterised pairwise-additive model for the Xe nuclear shielding tensor. We report the results for the (129)Xe nuclear shielding and its connection to the structure and order of the LC appropriate to two different cavity sizes, as well as a comparison to the results of bulk (non-confined) simulations. We find that the confinement changes the LC phase structure dramatically and gives rise to the coexistence of varying degrees of LC order, which is reflected in the Xe shielding. Furthermore, we qualitatively reproduce the behaviour of the mean (129)Xe chemical shift with respect to temperature for atomic Xe dissolved in LC confined to controlled-pore glass materials. In the small-radius cavity the nematic - paranematic phase transition is revealed only by the anisotropic component of the (129)Xe nuclear shielding. In the larger cavity, the nematic - paranematic - isotropic transition is clearly seen in the Xe shielding. The simulated (129)Xe NMR shielding is insensitive to the smectic-A - nematic transition, since in the smectic-A phase, the Xe atoms largely occupy the imperfect layer structure near the cavity walls. The direct contribution of the cavity wall to (129)Xe nuclear shielding is dependent on the cavity size but independent of temperature. Our results show that the combination of CG simulations and a QC pre-parameterised (129)Xe NMR shielding allows efficient studies of the phase behaviour and structure of complex systems containing thousands of molecules, and brings us closer to the simulation of NMR experiments.
- Published
- 2015
23. Ratcheting rotation or speedy spinning: EPR and dynamics of Sc
- Author
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Juho, Roukala, Michal, Straka, Stefan, Taubert, Juha, Vaara, and Perttu, Lantto
- Abstract
Besides their technological applications, endohedral fullerenes provide ideal conditions for investigating molecular dynamics in restricted geometries. A representative of this class of systems, Sc
- Published
- 2017
24. Electron and nuclear spin polarization in Rb-Xe spin-exchange optical hyperpolarization
- Author
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Matti Hanni, Juha Vaara, Perttu Lantto, Michal Repiský, Jiří Mareš, and Brian Saam
- Subjects
Spin polarization ,Optical pumping ,Electron ,010402 general chemistry ,01 natural sciences ,law.invention ,Nuclear magnetic resonance ,law ,0103 physical sciences ,Fine & hyperfine structure ,Hyperpolarization (physics) ,010306 general physics ,Electron paramagnetic resonance ,Spin (physics) ,Physics ,Number density ,VDP::Mathematics and natural science: 400::Chemistry: 440 ,Polarization (waves) ,0104 chemical sciences ,VDP::Matematikk og Naturvitenskap: 400::Kjemi: 440 ,Interatomic & molecular potentials ,Potential energy surfaces ,Atomic physics ,Nuclear & electron resonance - Abstract
Source at https://doi.org/10.1103/PhysRevA.95.032509. Spin-exchange optical hyperpolarization of 129Xe gas enhances the signal-to-noise ratio in nuclear magnetic resonance experiments. The governing parameter of the Rb-Xe spin-exchange process, the so-called enhancement factor, was recently reevaluated experimentally. However, the underlying hyperfine coupling and atomic interaction potential as functions of the internuclear distance of the open-shell Rb-Xe dimer have not been accurately determined to date. We present a piecewise approximation based on first-principles calculations of these parameters contributing to the NMR and EPR frequency shifts in the low-density Rb-Xe gas mixture of relevance to hyperpolarization experiments. Both Rb electron and 129Xe nuclear spin polarizations are estimated based on a combination of electronic-structure calculations, observed frequency shifts, and an estimate of the Rb number density. Finally, an expression for the enhancement factor in terms of modern electronic-structure theory is obtained.
- Published
- 2017
25. Faraday Rotation in Graphene Quantum Dots: Interplay of Size, Perimeter Type, and Functionalization
- Author
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Perttu Lantto, Juha Vaara, and Jarkko Vähäkangas
- Subjects
Materials science ,Verdet constant ,Condensed matter physics ,Graphene ,Polarization (waves) ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,law.invention ,symbols.namesake ,General Energy ,Zigzag ,Quantum dot ,law ,Faraday effect ,symbols ,Physical and Theoretical Chemistry ,Optical rotation ,Faraday cage - Abstract
Nanometer-sized graphene systems have optical properties that can be tuned in the visible range to enable new optoelectronic device applications. For such purposes it is of critical importance to fundamentally understand the behavior that is specific for the size, shape, and composition of the system. Recently, graphene has gained attention due to its capability to rotate the plane of polarization of linearly polarized light up to 6 degrees at 7 T magnetic field, which is a massive rotation for a single sheet of atoms. We present a computational study that contributes to understanding of this Faraday optical rotation (FOR) for graphene quantum dots (GQDs) of different size, perimeter structure, and composition. Based on first-principles calculations we predict FOR characterized by the Verdet constant, for a systematically growing series of hexagonal GQDs in the visible frequency range. We show evidence for the independence of FOR of the type of the perimeter, zigzag or armchair, in these hexagonal GQDs. I...
- Published
- 2014
- Full Text
- View/download PDF
26. Fully Relativistic Calculations of Faraday and Nuclear Spin-Induced Optical Rotation in Xenon
- Author
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Juha Vaara, Perttu Lantto, and Suvi Ikäläinen
- Subjects
Physics ,010304 chemical physics ,Verdet constant ,Nuclear Theory ,Hartree–Fock method ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Computer Science Applications ,Magnetic field ,symbols.namesake ,Coupled cluster ,Theory of relativity ,Quantum electrodynamics ,Quantum mechanics ,0103 physical sciences ,Faraday effect ,symbols ,Physical and Theoretical Chemistry ,Optical rotation ,Relativistic quantum chemistry - Abstract
Nuclear spin-induced optical rotation (NSOR) arising from the Faraday effect may constitute an advantageous novel method for the detection of nuclear magnetization. We present first-principles nonrelativistic and relativistic, two- and four-component, basis-set limit calculations of this phenomenon for xenon. It is observed that only by utilization of relativistic methods may one qualitatively reproduce experimental liquid-state NSOR data. Relativistic effects lower the results by 50% as compared to nonrelativistic values. Indeed, relativistic Hartree-Fock calculations at the four-component or exact two-component (X2C) level account for the discrepancy between experimental results and earlier nonrelativistic theory. The nuclear magnetic shielding constant of traditional nuclear magnetic resonance as well as the Verdet constant parametrizing optical rotation due to an external magnetic field were also calculated. A comparison between results obtained using Hartree-Fock and density-functional theory methods at relativistic and nonrelativistic levels, as well as coupled cluster methods at the nonrelativistic level, was carried out. Completeness-optimized basis sets were employed throughout, for the first time in fully relativistic calculations. Full relativity decreases the Verdet constant by 4%. X2C theory decreases the absolute value of NSOR by 10-20% as compared to the four-component data, while for Verdet constants, the results are only slightly smaller than the fully relativistic values. For both properties, two-component calculations decrease the computational time by roughly 90%. Density-functional methods yield substantially larger values of NSOR than the Hartree-Fock theory or experiments. Intermolecular interactions are found to decrease NSOR and, hence, compensate for the electron correlation effect.
- Published
- 2011
- Full Text
- View/download PDF
27. NMR Shielding Constants in PH3, Absolute Shielding Scale, and the Nuclear Magnetic Moment of 31P
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Karol Jackowski, Perttu Lantto, Michał Jaszuński, Małgorzata Olejniczak, and Włodzimierz Makulski
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Magnetic Resonance Spectroscopy ,010304 chemical physics ,Magnetic moment ,Hydrogen ,Phosphines ,010405 organic chemistry ,Chemistry ,Nuclear Theory ,Ab initio ,Analytical chemistry ,Phosphorus Isotopes ,Resonance ,chemistry.chemical_element ,7. Clean energy ,01 natural sciences ,0104 chemical sciences ,0103 physical sciences ,Electromagnetic shielding ,Nuclear magnetic moment ,Quantum Theory ,Density functional theory ,Physics::Atomic Physics ,Physical and Theoretical Chemistry ,Perturbation theory ,Atomic physics - Abstract
Ab initio values of the absolute shielding constants of phosphorus and hydrogen in PH(3) were determined, and their accuracy is discussed. In particular, we analyzed the relativistic corrections to nuclear magnetic resonance (NMR) shielding constants, comparing the constants computed using the four-component Dirac-Hartree-Fock approach, the four-component density functional theory (DFT), and the Breit-Pauli perturbation theory (BPPT) with nonrelativistic Hartree-Fock or DFT reference functions. For the equilibrium geometry, we obtained σ(P) = 624.309 ppm and σ(H) = 29.761 ppm. Resonance frequencies of both nuclei were measured in gas-phase NMR experiments, and the results were extrapolated to zero density to provide the frequency ratio for an isolated PH(3) molecule. This ratio, together with the computed shielding constants, was used to determine a new value of the nuclear magnetic dipole moment of (31)P: μ(P) = 1.1309246(50) μ(N).
- Published
- 2011
28. Nuclear Magnetic Resonance Chemical Shifts and Quadrupole Couplings for Different Hydrogen-Bonding Cases Occurring in Liquid Water: A Computational Study
- Author
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Juha Vaara, Teemu S. Pennanen, and Atte J. Sillanpää, and Perttu Lantto
- Subjects
010304 chemical physics ,Carbon-13 NMR satellite ,Chemistry ,Nuclear magnetic resonance crystallography ,Nuclear magnetic resonance spectroscopy ,Carbon-13 NMR ,010402 general chemistry ,J-coupling ,01 natural sciences ,0104 chemical sciences ,Nuclear magnetic resonance ,Solid-state nuclear magnetic resonance ,13. Climate action ,0103 physical sciences ,Proton NMR ,Physical and Theoretical Chemistry ,Two-dimensional nuclear magnetic resonance spectroscopy - Abstract
Nuclear magnetic resonance (NMR) parameters are determined theoretically for the oxygen and hydrogen/deuterium nuclei of differently hydrogen-bonded water molecules in liquid water at 300 K. The parameters are the chemical shift, the shielding anisotropy, the asymmetry parameter of shielding, the nuclear quadrupole coupling constant, and the asymmetry parameter of the nuclear quadrupole coupling. We sample instantaneous configurations from a Car-Parrinello molecular dynamics simulation and feed nuclear coordinates into a quantum chemical program for the calculation of NMR parameters using density-functional theory with the three-parameter hybrid exchange-correlation (B3LYP) functional. In the subsequent analysis, molecules are divided into groups according to the number of hydrogen bonds they possess, and the full average NMR tensors are calculated separately for each group. The classification of the hydrogen-bonding cases is performed using a simple distance-based criterion. The analysis reveals in detail how the NMR tensors evolve as the environment changes gradually from gas to liquid upon increasing the number of hydrogen bonds to the molecule of interest. Liquid-state distributions of the instantaneous values of the NMR properties show a wide range of values for each hydrogen-bonding species with significant overlap between the different cases. Our study shows how local changes in the environment, along with classical thermal averaging, affect the NMR parameters in liquid water. For example, a broken or alternatively extra hydrogen bond induces major changes in the NMR tensors, and the effect is more pronounced for hydrogen or deuterium than for oxygen. The data sheds light on the usefulness of NMR experiments in investigating the local coordination of liquid water.
- Published
- 2006
29. NMR Spectroscopy Investigation of the Cooperative Nature of the Internal Rotational Motions in Acetophenone
- Author
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Giuseppe Pileio, Giuseppina De Luca, Perttu Lantto, and Marcello Longeri
- Subjects
Coupling ,Chemistry ,Nuclear magnetic resonance spectroscopy ,Molecular physics ,Atomic and Molecular Physics, and Optics ,Nuclear magnetic resonance ,Liquid crystal ,Proton NMR ,Molecule ,Density functional theory ,Tensor ,Physics::Chemical Physics ,Physical and Theoretical Chemistry ,Conformational isomerism - Abstract
The proton NMR spectrum of the doubly enriched acetophenone-carbonyl,methyl-13C2 isotopomer dissolved in a liquid-crystalline solvent (LXNMR) was analyzed to yield a data set of 19 dipolar couplings. The presence of so many couplings, and in particular the dependence of some of them on the acetyl carbons enabled the investigation of the structure of the acetyl moiety and of possible cooperative motions about the aryl-carbonyl and carbonyl-methyl bonds. Methodological aspects, and approximations relating to the application of the vibrational correction procedure in the presence of large-amplitude torsional motions, are discussed. Results show that it is possible to discriminate between a continuous and a discrete conformer distribution about the angle phi(1) but not among a few proposed continuous shapes of U(iso)({phi}). In this study, the use of dipolar couplings with a non-negligible contribution from the indirect spin-spin coupling tensor J, (D(C8C9) in our case), for structural determination is extended from rigid to flexible molecules. The 1/2J(aniso)(C8C9) contribution was derived theoretically using the density functional theory linear response (DFT-LR) first-principles calculation of the J(C8C9) spin-spin coupling tensor.
- Published
- 2005
30. Calculation of binary magnetic properties and potential energy curve in xenon dimer: Second virial coefficient of 129Xe nuclear shielding
- Author
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Matti Hanni, Perttu Lantto, Jukka Jokisaari, Nino Runeberg, and Juha Vaara
- Subjects
Chemistry ,General Physics and Astronomy ,chemistry.chemical_element ,Interatomic potential ,Rotational–vibrational spectroscopy ,Potential energy ,Xenon ,Virial coefficient ,Ab initio quantum chemistry methods ,Quadrupole ,Physics::Atomic and Molecular Clusters ,Physical and Theoretical Chemistry ,Atomic physics ,Ground state - Abstract
Quantum chemical calculations of the nuclear shielding tensor, the nuclear quadrupole coupling tensor, and the spin-rotation tensor are reported for the Xe dimer using ab initio quantum chemical methods. The binary chemical shift delta, the anisotropy of the shielding tensor Delta sigma, the nuclear quadrupole coupling tensor component along the internuclear axis chi( parallel ), and the spin-rotation constant C( perpendicular ) are presented as a function of internuclear distance. The basis set superposition error is approximately corrected for by using the counterpoise correction (CP) method. Electron correlation effects are systematically studied via the Hartree-Fock, complete active space self-consistent field, second-order Møller-Plesset many-body perturbation, and coupled-cluster singles and doubles (CCSD) theories, the last one without and with noniterative triples, at the nonrelativistic all-electron level. We also report a high-quality theoretical interatomic potential for the Xe dimer, gained using the relativistic effective potential/core polarization potential scheme. These calculations used valence basis set of cc-pVQZ quality supplemented with a set of midbond functions. The second virial coefficient of Xe nuclear shielding, which is probably the experimentally best-characterized intermolecular interaction effect in nuclear magnetic resonance spectroscopy, is computed as a function of temperature, and compared to experiment and earlier theoretical results. The best results for the second virial coefficient, obtained using the CCSD(CP) binary chemical shift curve and either our best theoretical potential or the empirical potentials from the literature, are in good agreement with experiment. Zero-point vibrational corrections of delta, Delta sigma, chi (parallel), and C (perpendicular) in the nu=0, J=0 rovibrational ground state of the xenon dimer are also reported.
- Published
- 2004
31. Perturbationalab initiocalculations of relativistic contributions to nuclear magnetic resonance shielding tensors
- Author
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Juha Vaara, Perttu Lantto, Pekka Manninen, and Kenneth Ruud
- Subjects
Physics ,Nuclear Theory ,General Physics and Astronomy ,symbols.namesake ,Nuclear magnetic resonance ,Pauli exclusion principle ,Ab initio quantum chemistry methods ,Quantum electrodynamics ,Electromagnetic shielding ,symbols ,Tensor ,Complete active space ,Physical and Theoretical Chemistry ,Relativistic quantum chemistry ,Wave function ,Hamiltonian (quantum mechanics) - Abstract
We present perturbational ab initio calculations of the leading-order one-electron relativistic contributions to the nuclear magnetic resonance shielding tensor based on the Pauli Hamiltonian. The scalar relativistic and spin–orbit interaction effects, including both relativistic corrections to the wave function (“passive” relativistic effects) and relativistic magnetic perturbation operators (“active” effects), are considered for H2X (X=O, S, Se, Te, Po), HX (X=F, Cl, Br, I, At), and noble gas (Ne, Ar, Kr, Xe, Rn) systems. The perturbational corrections are calculated using linear and quadratic response theory applied to nonrelativistic reference states. We use the uncorrelated self-consistent field as well as correlated, multiconfigurational complete active space self-consistent field models. Results for the 1H and heavy-atom shielding constants and anisotropies are compared with Dirac–Hartree–Fock and quasirelativistic data.
- Published
- 2003
32. Spin–spin coupling tensors by density-functional linear response theory
- Author
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Juha Vaara, Trygve Helgaker, and Perttu Lantto
- Subjects
Coupling constant ,Coupling ,Condensed matter physics ,Chemistry ,Ab initio ,General Physics and Astronomy ,Molecular physics ,Hybrid functional ,Ab initio quantum chemistry methods ,Condensed Matter::Strongly Correlated Electrons ,Density functional theory ,Physics::Chemical Physics ,Physical and Theoretical Chemistry ,Local-density approximation ,Spin-½ - Abstract
Density-functional theory (DFT) calculations of indirect nuclear magnetic resonance spin–spin coupling tensors J, with the anisotropic but symmetric parts being the particular concern, are carried out for a series of molecules with the linear response (LR) method. For the first time, the anisotropic components of J are reported for a hybrid functional. Spin–spin tensors calculated using the local density approximation (LDA), the gradient-corrected Becke–Lee–Yang–Parr (BLYP) functional, and the hybrid three-parameter BLYP (B3LYP) functional are compared with previous ab initio multiconfiguration self-consistent-field (MCSCF) LR results and experimental data. In general, the B3LYP functional provides reasonable accuracy not only for the isotropic coupling constants but also for the anisotropic components of J, with the results improving in the sequence LDA→BLYP→B3LYP. Error cancellation often improves the total DFT spin–spin coupling when the magnitude of the paramagnetic spin–orbit contribution is overesti...
- Published
- 2002
33. Relativistic Spin−Orbit Coupling Effects on Secondary Isotope Shifts of13C Nuclear Shielding in CX2(X = O, S, Se, Te)
- Author
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Ville-Veikko Telkki, Anu M. Kantola, Jukka Jokisaari, Juha Vaara, Bernd Schimmelpfennig, Perttu Lantto, and Kenneth Ruud
- Subjects
Field (physics) ,Isotope ,Chemistry ,Ab initio ,General Chemistry ,Rotational–vibrational spectroscopy ,Spin–orbit interaction ,Carbon-13 NMR ,Biochemistry ,Catalysis ,Colloid and Surface Chemistry ,Nuclear magnetic resonance ,Kinetic isotope effect ,Electromagnetic shielding ,Physics::Atomic Physics ,Atomic physics - Abstract
Rovibrational corrections, temperature dependence, and secondary isotope shifts of the 13C nuclear shielding in CX2 (X = O, S, Se, Te) are calculated taking into account the relativistic spin−orbit (SO) interaction. The SO effect is considered for the first time for the secondary isotope shifts. The nuclear shielding hypersurface in terms of nuclear displacements is calculated by using a density-functional theory method. Ab initio multiconfiguration self-consistent field calculations are done at the equilibrium geometry for comparison. 13C NMR measurements are carried out for CS2. The calculated results are compared with both present and earlier experimental data on CO2, CS2, and CSe2. The heavy-atom SO effects on the rovibrational corrections of 13C shielding are shown to be significant. For CSe2 and CTe2, reliable prediction of secondary isotope effects and their temperature dependence requires the inclusion of the SO corrections. In particular, earlier discrepancies of theory and experiment for CSe2 ar...
- Published
- 2002
34. Inside Back Cover: Clathrate Structure Determination by Combining Crystal Structure Prediction with Computational and Experimental 129 Xe NMR Spectroscopy (Chem. Eur. J. 22/2017)
- Author
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Perttu Lantto, Risto S. Laitinen, Graeme M. Day, Marcin Selent, Marek Ilczyszyn, Jukka Jokisaari, Juho Roukala, Raija Oilunkaniemi, Jonas Nyman, and Peter J. Bygrave
- Subjects
Chemistry ,Organic Chemistry ,Clathrate hydrate ,Structure (category theory) ,02 engineering and technology ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Crystal structure prediction ,Chemical physics ,Physical chemistry ,Density functional theory ,Cover (algebra) ,0210 nano-technology - Published
- 2017
35. Effect of correlating core orbitals in calculations of nuclear spin–spin couplings
- Author
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Perttu Lantto and Juha Vaara
- Subjects
Electronic correlation ,Atomic orbital ,Ab initio quantum chemistry methods ,Chemistry ,General Physics and Astronomy ,Molecular orbital theory ,Molecular orbital ,Physical and Theoretical Chemistry ,Atomic physics ,Wave function ,Electric field gradient ,Basis set - Abstract
Electron correlation effects on nuclear spin–spin coupling tensors arising from core-valence interaction were investigated with ab initio calculations based on multiconfigurational self-consistent field (MCSCF) reference states, an adequate basis set, and large restricted active spaces. Calculations of first and second-row hydrides were performed to examine the effect of including the core and semicore orbitals in the active molecular orbital space. The effects of using a multireference wave function instead of a single-reference one, as well as different numbers of electrons in the virtual orbitals, were considered. In second-row hydrides, the inclusion of semicore orbitals is found to be necessary for accurate calculations of spin–spin couplings involving the heavy nucleus. A smaller but nonnegligible effect is observed also for the hydrogen–hydrogen coupling. Comparison is made with nuclear shielding and electric field gradient, for which the effect is considerably smaller. Recommendations for wave fun...
- Published
- 2001
36. Characteristic spectral patterns in the carbon-13 nuclear magnetic resonance spectra of hexagonal and crenellated graphene fragments
- Author
-
Juha Vaara, Jarkko Vähäkangas, Perttu Lantto, and Nergiz Özcan
- Subjects
Materials science ,Graphene ,Chemical shift ,Nuclear magnetic resonance spectroscopy ,Carbon-13 NMR ,Atomic and Molecular Physics, and Optics ,law.invention ,chemistry.chemical_compound ,Nuclear magnetic resonance ,chemistry ,law ,Quantum dot ,Graphane ,Physical and Theoretical Chemistry ,Fluorographene ,Graphene nanoribbons - Abstract
Nuclear magnetic resonance (NMR) spectroscopy is an important molecular characterisation method that may aid the synthesis and production of graphenes, especially the molecular-scale graphene nanoislands that have gathered significant attention due to their potential electronic and optical applications. Herein, carbon-13 NMR chemical shifts were calculated using density functional theory methods for finite, increasing-size fragments of graphene, hydrogenated graphene (graphane) and fluorinated graphene (fluorographene). Both concentric hexagon-shaped (zigzag boundary) and crenellated (armchair) fragments were investigated to gain information on the effect of different types of flake boundaries. Convergence trends of the (13)C chemical shift with respect to increasing fragment size and the boundary effects were found and rationalised in terms of low-lying electronically excited states. The results predict characteristic behaviour in the (13)C NMR spectra. Particular attention was paid to the features of the signals arising from the central carbon atoms of the fragments, for graphene and crenellated graphene on the one hand and graphane and fluorographene on the other hand, to aid the interpretation of the overall spectral characteristics. In graphene, the central nuclei become more shielded as the system size increases whereas the opposite behaviour is observed for graphane and fluorographene. The (13)C signals from some of the perimeter nuclei of the crenellated fragments obtain smaller and larger chemical shift values than central nuclei for graphene and graphane/fluorographene, respectively. The diameter of the graphenic quantum dots with zigzag boundary correlates well with the predicted carbon-13 chemical shift range, thus enabling estimation of the size of the system by NMR spectroscopy. The results provide data of predictive quality for future NMR analysis of the graphene nanoflake materials.
- Published
- 2013
37. Spin-Spin Coupling Tensors in Fluoromethanes
- Author
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Juha Vaara, Jaakko Kaski, Jukka Jokisaari, and Perttu Lantto
- Subjects
Coupling constant ,Coupling ,Chemistry ,Organic Chemistry ,Ab initio ,General Chemistry ,Molecular physics ,Catalysis ,Nuclear magnetic resonance ,Ab initio quantum chemistry methods ,Molecular vibration ,Tensor ,Magnetic dipole–dipole interaction ,Spin-½ - Abstract
All spin-spin coupling tensors J of the fluoromethanes CH3F, CH2F2, and CHF3 are obtained theoretically by multiconfiguration self-consistent field linear response (MCSCF LR) ab initio calculations. Furthermore the principal values and the orientation of the principal axis systems of each theoretical J tensor are specified. Experimental liquid crystal NMR (LC NMR) data on the tensorial properties of the CF spin spin coupling in CH3F and CH2F2, and the FF spin-spin coupling in CHF3 are also reported. In the analysis of the experiments, the contributions from molecular vibrations, as well as that of the correlation of vibrational and rotational motion to the experimental anisotropic couplings, D(exp), are taken into account. The information of the anisotropic indirect coupling, 1/2J(aniso), is detected as the difference between D(exp) and the calculated dipolar coupling, D(calc). The extracted indirect contributions, 1/2J(aniso), are in fair agreement with the ab initio results. All relative (experimental and theoretical) CF and FF indirect contributions, 1/2J(aniso)/D(exp), are negative and under 1.7% in magnitude, when the observed molecular orientations are used. Therefore, in the one bond CF couplings and in the two bond FF couplings, the indirect contribution can normally be ignored without introducing serious error to the determination of molecular orientation and/or structure. However, a more accurate method is to partially correct for the indirect contribution by utilising the transferability of the spin-spin coupling tensors in related molecules. This is due to the fact that even small contributions may be significant, if the order parameter of the internuclear direction is negligibly small, leading to dominating indirect contributions. The very good agreement of the experimental values with the calculated coupling constants and the reasonable agreement in the anisotropic properties, which are experimentally much more difficult to define, indicates that the MCSCF LR method is capable of producing reliable J tensors for these systems, contrary to the case of density-functional theory.
- Published
- 2000
38. Experimental and Theoretical Study of the Spin−Spin Coupling Tensors in Methylsilane
- Author
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Jyrki Schroderus, Juha Vaara, Tapio T. Rantala, Perttu Lantto, Jaakko Kaski, and Jukka Jokisaari
- Subjects
Chemistry ,Anharmonicity ,Ab initio ,J-coupling ,Molecular physics ,chemistry.chemical_compound ,Nuclear magnetic resonance ,Molecular geometry ,Liquid crystal ,Physics::Chemical Physics ,Physical and Theoretical Chemistry ,Anisotropy ,Quantum ,Methylsilane - Abstract
The experimental and theoretical 13C−29Si spin−spin coupling tensors, 1JCSi, are reported for methylsilane, 13CH329SiH3. The experiments are performed by applying the liquid crystal NMR (LC NMR) method. The data obtained by dissolving CH3SiH3 in nematic phases of two LC's is analyzed by taking into account harmonic and anharmonic vibrations, internal rotation, and solvent-induced anisotropic deformation of the molecule. The necessary parameters describing the relaxation of the molecular geometry during the internal rotation, as well as the harmonic force field, are produced theoretically with semiempirical (AM1 and PM3) and ab initio (MP2) calculations. A quantum mechanical approach has been taken to treat the effects arising from internal rotation. All the J tensors are determined theoretically by ab initio MCSCF linear response calculations. The theoretical and experimental J coupling anisotropies, Δ1JCSi = −59.3 Hz and −89 ± 10 Hz, respectively, are in fair mutual agreement. These results indicate that...
- Published
- 1999
39. Experimental and Theoretical ab Initio Study of the 13C−13C Spin−Spin Coupling and 1H and 13C Shielding Tensors in Ethane, Ethene, and Ethyne
- Author
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Jukka Jokisaari, Perttu Lantto, Juha Vaara, and Jaakko Kaski
- Subjects
Coupling ,Chemistry ,Inorganic chemistry ,Ab initio ,General Chemistry ,Carbon-13 NMR ,Biochemistry ,Molecular physics ,Catalysis ,Spectral line ,Colloid and Surface Chemistry ,Ab initio quantum chemistry methods ,Molecule ,Physics::Chemical Physics ,Spin (physics) ,Anisotropy - Abstract
Experimentally and theoretically (ab initio) determined CC spin−spin coupling tensors and 1H and 13C nuclear shielding tensors are reported for ethane (13C2H6), ethene (13C2H4), and ethyne (13C2H2). The experimental anisotropies of the CC coupling tensors, ΔJCC, for all these molecules, and also the combination JCC,xx − JCC,yy for ethene, were derived from sets of anisotropic couplings (Dexp) analyzed from the 1H and 13C NMR spectra of molecules partially oriented in liquid−crystalline environments. Both harmonic vibrations and structural deformations arising from the correlation of vibrational and reorientational motions were taken into account in the D couplings. The ab initio calculations of all the J tensors were performed using MCSCF linear response theory. The best calculated and experimental ΔJCC values (along with JCC,xx − JCC,yy for ethene) are found to be in good mutual agreement. Together with earlier work on the nJCC tensors in benzene, this study shows that the indirect contribution, 1/2JCCan...
- Published
- 1998
40. Nuclear magnetic resonance predictions for graphenes: concentric finite models and extrapolation to large systems
- Author
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Perttu Lantto, Jarkko Vähäkangas, Suvi Ikäläinen, and Juha Vaara
- Subjects
Models, Molecular ,Magnetic Resonance Spectroscopy ,General Physics and Astronomy ,02 engineering and technology ,01 natural sciences ,7. Clean energy ,law.invention ,chemistry.chemical_compound ,Nuclear magnetic resonance ,law ,0103 physical sciences ,Graphane ,Physical and Theoretical Chemistry ,Fluorographene ,Anisotropy ,Coupling ,010304 chemical physics ,Condensed matter physics ,Chemistry ,Graphene ,Chemical shift ,Reference Standards ,021001 nanoscience & nanotechnology ,Electromagnetic shielding ,Quadrupole ,Quantum Theory ,Graphite ,0210 nano-technology - Abstract
Nuclear magnetic resonance (NMR) data for graphenes are mainly lacking in the literature. We provide quantitative first-principles quantum-chemical calculations of NMR chemical shifts and shielding anisotropies as well as spin-spin couplings and anisotropies for increasingly large, hexagon-like fragments of graphene, hydrogenated graphene (graphane) and fluorinated graphene (fluorographene). Due to the rapid convergence of finite molecular model results, the parameter values in the innermost region of large flakes of these materials approach the bulk limit. For nuclear shieldings in the finite band-gap graphane and fluorographene systems, as well as deuterium quadrupole couplings in graphane, these limiting values are verified by periodic gauge-including projector augmented wave (PAW) calculations at corresponding theoretical levels. The periodic PAW wave method was used for all systems to obtain periodic structures. A quantum-chemical cluster approach was used with novel completeness-optimised basis sets to calculate both the shielding and coupling tensors for planar carbon nanoflakes of increasing size. The geometry of the innermost part of the nanoflakes as well as the nuclear shieldings converge toward the periodic counterparts. The cluster method allows the calculation of the spin-spin coupling tensors of all the graphenes and--in contrast to the periodic approach--all the NMR properties for the zero-band-gap graphene itself. The obtained parameters provide a plausible starting point for experimental NMR investigations of graphenes.
- Published
- 2013
- Full Text
- View/download PDF
41. Nuclear spin optical rotation and Faraday effect in gaseous and liquid water
- Author
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Perttu Lantto, Teemu S. Pennanen, Juha Vaara, and Suvi Ikäläinen
- Subjects
010304 chemical physics ,Condensed matter physics ,Verdet constant ,Chemistry ,General Physics and Astronomy ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,law.invention ,Magnetic field ,symbols.namesake ,Magnetization ,law ,Polarizability ,Electric field ,0103 physical sciences ,Faraday effect ,symbols ,Physical and Theoretical Chemistry ,Atomic physics ,Optical rotation ,Faraday rotator - Abstract
Nuclear spin optical rotation (NSOR) of linearly polarized light, due to the nuclear spins through the Faraday effect, provides a novel probe of molecular structure and could pave the way to optical detection of nuclear magnetization. We determine computationally the effects of the liquid medium on NSOR and the Verdet constant of Faraday rotation (arising from an external magnetic field) in water, using the recently developed theory applied on a first-principles molecular dynamics trajectory. The gas-to-liquid shifts of the relevant antisymmetric polarizability and, hence, NSOR magnitude are found to be -14% and -29% for (1)H and (17)O nuclei, respectively. On the other hand, medium effects both enhance the local electric field in water and, via bulk magnetization, the local magnetic field. Together these two effects partially cancel the solvation influence on the single-molecular property. We find a good agreement for the hydrogen NSOR with a recent pioneering experiment on H(2)O(l).
- Published
- 2012
42. Exploring new 129Xe chemical shift ranges in HXeY compounds: hydrogen more relativistic than xenon
- Author
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Sebastian Riedel, Stanislav Standara, Juha Vaara, Perttu Lantto, and Michal Straka
- Subjects
010304 chemical physics ,Hydrogen ,Chemical shift ,Matrix isolation ,Ab initio ,General Physics and Astronomy ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Xenon ,chemistry ,Oxidation state ,0103 physical sciences ,Atom ,Physical chemistry ,Physical and Theoretical Chemistry ,Relativistic quantum chemistry - Abstract
Among rare gases, xenon features an unusually broad nuclear magnetic resonance (NMR) chemical shift range in its compounds and as a non-bonded Xe atom introduced into different environments. In this work we show that (129)Xe NMR chemical shifts in the recently prepared, matrix-isolated xenon compounds appear in new, so far unexplored (129)Xe chemical shift ranges. State-of-the-art theoretical predictions of NMR chemical shifts in compounds of general formula HXeY (Y = H, F, Cl, Br, I, -CN, -NC, -CCH, -CCCCH, -CCCN, -CCXeH, -OXeH, -OH, -SH) as well as in the recently prepared ClXeCN and ClXeNC species are reported. The bonding situation of Xe in the studied compounds is rather different from the previously characterized cases as Xe appears in the electronic state corresponding to a situation with a low formal oxidation state, between I and II in these compounds. Accordingly, the predicted (129)Xe chemical shifts occur in new NMR ranges for this nucleus: ca. 500-1000 ppm (wrt Xe gas) for HXeY species and ca. 1100-1600 ppm for ClXeCN and ClXeNC. These new ranges fall between those corresponding to the weakly-bonded Xe(0) atom in guest-host systems (δ300 ppm) and in the hitherto characterized Xe molecules (δ2000 ppm). The importance of relativistic effects is discussed. Relativistic effects only slightly modulate the (129)Xe chemical shift that is obtained already at the nonrelativistic CCSD(T) level. In contrast, spin-orbit-induced shielding effects on the (1)H chemical shifts of the H1 atom directly bonded to the Xe center largely overwhelm the nonrelativistic deshielding effects. This leads to an overall negative (1)H chemical shift in the range between -5 and -25 ppm (wrt CH(4)). Thus, the relativistic effects induced by the heavy Xe atom appear considerably more important for the chemical shift of the neighbouring, light hydrogen atom than that of the Xe nucleus itself. The predicted NMR parameters facilitate an unambiguous experimental identification of these novel compounds.
- Published
- 2012
- Full Text
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43. Relativistic effects on group-12 metal nuclear shieldings
- Author
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Juha Vaara, Gustavo A. Aucar, Juho Roukala, Perttu Lantto, and Alejandro Fabián Maldonado
- Subjects
Física Atómica, Molecular y Química ,Work (thermodynamics) ,BPPT METHOD ,Ciencias Físicas ,General Physics and Astronomy ,POLARIZATION PROPAGATOR ,010402 general chemistry ,01 natural sciences ,Ion ,Metal ,Theory of relativity ,0103 physical sciences ,Physical and Theoretical Chemistry ,010304 chemical physics ,Chemistry ,Chemical shift ,RELATIVISTIC EFFECTS ,NMR ,0104 chemical sciences ,visual_art ,Electromagnetic shielding ,visual_art.visual_art_medium ,Perturbation theory (quantum mechanics) ,Atomic physics ,Relativistic quantum chemistry ,CIENCIAS NATURALES Y EXACTAS - Abstract
The leading-order perturbation theory approach to relativistic effects on the nuclear magnetic shielding provides an economic method for obtaining the chemical shifts in heavy-element containing systems. The method features detailed analysis potential in terms of the different physical mechanisms affecting the shielding tensors of heavy nuclei. The perturbative nature, however, results in an increasing error with increasingly heavy elements in the system. In this work, we investigate the performance of the Breit-Pauli perturbation theory (BPPT) against fully relativistic four-component theory in computing the nuclear shielding constants as well as the chemical shifts with respect to corresponding atomic ions of group-12 metals, M = Zn, Cd, and Hg, in dimethyl M(CH3)2 and aqueous M(H2O) 62+ complexes. It is shown that five out of the total of sixteen BPPT correction terms are responsible for most of the relativistic corrections for the chemical shift of studied metals. The relativity is important already for Cd and BPPT is proven to work well up to Hg for the chemical shift, as calibrated with the fully relativistic method. Fil: Roukala, Juho. University of Oulu; Finlandia Fil: Maldonado, Alejandro Fabián. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Modelado e Innovación Tecnológica. Universidad Nacional del Nordeste. Facultad de Ciencias Exactas Naturales y Agrimensura. Instituto de Modelado e Innovación Tecnológica; Argentina Fil: Vaara, Juha. University of Oulu; Finlandia Fil: Aucar, Gustavo Adolfo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Modelado e Innovación Tecnológica. Universidad Nacional del Nordeste. Facultad de Ciencias Exactas Naturales y Agrimensura. Instituto de Modelado e Innovación Tecnológica; Argentina Fil: Lanto, Perttu. University of Oulu; Finlandia
- Published
- 2011
44. Carbon and proton shielding tensors in methyl halides
- Author
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Juha Vaara, Perttu Lantto, Jukka Jokisaari, and Anu M. Kantola
- Subjects
010405 organic chemistry ,Chemistry ,Anharmonicity ,Ab initio ,General Physics and Astronomy ,Rotational–vibrational spectroscopy ,010402 general chemistry ,01 natural sciences ,7. Clean energy ,Molecular physics ,0104 chemical sciences ,13. Climate action ,Computational chemistry ,Ab initio quantum chemistry methods ,Electromagnetic shielding ,Physics::Atomic and Molecular Clusters ,Shielding effect ,Density functional theory ,Physics::Atomic Physics ,Physical and Theoretical Chemistry ,Relativistic quantum chemistry - Abstract
The series of methyl halides, CH(3)X (X = F, Cl, Br, and I), is prototypic for demonstrating the s.c. normal halogen dependence of light-atom nuclear magnetic resonance shielding constants in the presence of halogen atoms of varying electronegativity. We report a systematic experimental and first-principles theoretical study of the (13)C and (1)H shielding tensors in this series. The experimental shielding constants were obtained from gas-phase NMR experiments and the anisotropies were determined using liquid crystal NMR spectroscopy. After taking into account rovibrational effects and solute-solvent interactions, this provided the currently best experimental estimates for the full shielding tensors. Quantum chemical calculations were carried out at ab initio and density functional theory levels, involving relativistic corrections taken into account at the leading-order Breit-Pauli perturbation level. Anharmonic and harmonic vibrational corrections were performed. The main trends of the shielding constants and anisotropies of the nearby light (13)C and (1)H nuclei as functions of the halogen mass, were confirmed to be mainly due to relativistic spin-orbit effects. For carbon, also the scalar relativistic effects are important for quantitative results. Thermal averaging at 300 K decreases the magnitude of all the parameters but exhibits partial cancellation between the nonrelativistic and smaller relativistic rovibrational averages. For the shielding anisotropy, the relativistic terms add to the negative rovibrational effect. Overall, the current experimental and theoretical results are in excellent agreement for all the shielding parameters, setting a standard for further investigations of normal halogen dependence.
- Published
- 2010
45. Laser-induced nuclear magnetic resonance splitting in hydrocarbons
- Author
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Juha Vaara, Suvi Ikäläinen, Pekka Manninen, and Perttu Lantto
- Subjects
010304 chemical physics ,Chemistry ,Ab initio ,General Physics and Astronomy ,Resonance ,010402 general chemistry ,7. Clean energy ,01 natural sciences ,Coronene ,0104 chemical sciences ,chemistry.chemical_compound ,Nuclear magnetic resonance ,Polarizability ,Ab initio quantum chemistry methods ,0103 physical sciences ,Physics::Atomic and Molecular Clusters ,Density functional theory ,Physical and Theoretical Chemistry ,Atomic physics ,Hyperfine structure ,Excitation - Abstract
Irradiation of matter with circularly polarized light (CPL) shifts all nuclear magnetic resonance (NMR) lines. The phenomenon arises from the second-order interaction of the electron cloud with the optical field, combined with the orbital hyperfine interaction. The shift occurs in opposite directions for right and left CPL, and rapid switching between them will split the resonance lines into two. We present ab initio and density functional theory predictions of laser-induced NMR splittings for hydrocarbon systems with different sizes: ethene, benzene, coronene, fullerene, and circumcoronene. Due to the computationally challenging nature of the effect, traditional basis sets could not be used for the larger systems. A novel method for generating basis sets, mathematical completeness optimization, was employed. As expected, the magnitude of the spectral splitting increases with the laser beam frequency and polarizability of the system. Massive amplification of the effect is also observed close to the optical excitation energies. A much larger laser-induced splitting is found for the largest of the present molecules than for the previously investigated noble gas atoms or small molecules. The laser intensity required for experimental detection of the effect is discussed.
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- 2008
46. Toward calculations of the 129Xe chemical shift in Xe@C60 at experimental conditions: relativity, correlation, and dynamics
- Author
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Michal Straka, Juha Vaara, and Perttu Lantto
- Subjects
Physics ,Theory of relativity ,Electronic correlation ,Quantum dynamics ,Quantum mechanics ,Atom ,Physics::Atomic and Molecular Clusters ,Density functional theory ,Physical and Theoretical Chemistry ,Atomic physics ,Perturbation theory ,Wave function ,Relativistic quantum chemistry - Abstract
We calculate the 129Xe chemical shift in endohedral Xe@C60 with systematic inclusion of the contributing physical effects to model the real experimental conditions. These are relativistic effects, electron correlation, the temperature-dependent dynamics, and solvent effects. The ultimate task is to obtain the right result for the right reason and to develop a physically justified methodological model for calculations and simulations of endohedral Xe fullerenes and other confined Xe systems. We use the smaller Xe...C6H6 model to calibrate density functional theory approaches against accurate correlated wave function methods. Relativistic effects as well as the coupling of relativity and electron correlation are evaluated using the leading-order Breit-Pauli perturbation theory. The dynamic effects are treated in two ways. In the first approximation, quantum dynamics of the Xe atom in a rigid cage takes advantage of the centrosymmetric potential for Xe within the thermally accessible distance range from the center of the cage. This reduces the problem of obtaining the solution of a diatomic rovibrational problem. In the second approach, first-principles classical molecular dynamics on the density functional potential energy hypersurface is used to produce the dynamical trajectory for the whole system, including the dynamic cage. Snapshots from the trajectory are used for calculations of the dynamic contribution to the absorption 129Xe chemical shift. The calculated nonrelativistic Xe shift is found to be highly sensitive to the optimized molecular structure and to the choice of the exchange-correlation functional. Relativistic and dynamic effects are significant and represent each about 10% of the nonrelativistic static shift at the minimum structure. While the role of the Xe dynamics inside of the rigid cage is negligible, the cage dynamics turns out to be responsible for most of the dynamical correction to the 129Xe shift. Solvent effects evaluated with a polarized continuum model are found to be very small.
- Published
- 2008
47. (129)Xe chemical shift by the perturbational relativistic method: xenon fluorides
- Author
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Perttu Lantto and Juha Vaara
- Subjects
Zeeman effect ,Fermi contact interaction ,010304 chemical physics ,Condensed matter physics ,Chemical shift ,General Physics and Astronomy ,chemistry.chemical_element ,010402 general chemistry ,7. Clean energy ,01 natural sciences ,0104 chemical sciences ,symbols.namesake ,Xenon ,chemistry ,0103 physical sciences ,Electromagnetic shielding ,symbols ,Physical and Theoretical Chemistry ,Perturbation theory ,Atomic physics ,Wave function ,Hyperfine structure - Abstract
(129)Xe nuclear shielding tensor is calculated at the leading-order, one-electron Breit-Pauli perturbation theory (BPPT) level for the xenon fluorides XeF(+), XeF(2), XeF(3) (+), and XeF(4) that cover the large nuclear magnetic resonance chemical shift range of this nucleus. BPPT is found to improve the shift range and relative shifts as compared to the nonrelativistic (NR) theory. While the full BPPT expansion consists of 16 relativistic terms, 5 of them are responsible for the entire chemical shift and shielding anisotropy. The remaining terms are practically isotropic, corelike contributions that are significant for the absolute shielding constant but cancel for the relative chemical shifts. The five principal terms are due to the spin-orbit-modified wave function allowing the Fermi contact and spin-dipole hyperfine interactions to be coupled to the orbital Zeeman interaction, as well as three distinct scalar relativistic modifications of the NR paramagnetic shielding: wave function change due to mass-velocity and Darwin interactions and the relativistic modification of the orbital hyperfine interaction. A very good agreement with the experimental shifts is obtained for XeF(2) and the particularly challenging XeF(+) species when both the NR and the five main relativistic terms are calculated at electron-correlated ab initio levels of theory. The performance of density-functional theory (DFT) with different pure and hybrid exchange-correlation functionals (with increasing exact exchange admixture) is tested against the ab initio data for each individual contribution. It is shown that DFT has difficulties in the description of paramagnetic shielding, already and especially in the NR contribution, which causes a large discrepancy of DFT results with experiment for xenon fluorides. In contrast, the DFT errors for the relativistic terms cancel out to the extent that a fairly good approximation of the total relativistic shift and anisotropy contributions may be obtained. A combination of high-level ab initio NR calculation with hybrid DFT estimates of the five main BPPT terms is proposed for reasonable estimates of xenon chemical shift in molecules. For the difficult cases such as the present XeF(+) and XeF(3) (+) cations, correlated ab initio calculations are unavoidable throughout. None of the other currently available relativistic methods, either at the fully relativistic or a variationally stable quasirelativistic levels of theory, surpasses the quality of the present approach for Xe shifts in these systems.
- Published
- 2007
48. Relativistic effects in the intermolecular interaction-induced nuclear magnetic resonance parameters of xenon dimer
- Author
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Hans Jørgen Aagaard Jensen, Miroslav Iliaš, Juha Vaara, Matti Hanni, and Perttu Lantto
- Subjects
Theory of relativity ,Nuclear magnetic resonance ,Electronic correlation ,Atomic orbital ,Chemistry ,Intermolecular force ,Quadrupole ,General Physics and Astronomy ,Density functional theory ,Physical and Theoretical Chemistry ,Atomic physics ,Relativistic quantum chemistry ,Potential energy - Abstract
Relativistic effects on the 129Xe nuclear magnetic resonance shielding and 131Xe nuclear quadrupole coupling (NQC) tensors are examined in the weakly bound Xe2 system at different levels of theory including the relativistic four-component Dirac-Hartree-Fock (DHF) method. The intermolecular interaction-induced binary chemical shift d, the anisotropy of the shielding tensor ?s, and the NQC constant along the internuclear axis ?ll are calculated as a function of the internuclear distance. DHF shielding calculations are carried out using gauge-including atomic orbitals. For comparison, the full leading-order one-electron Breit-Pauli perturbation theory (BPPT) is applied using a common gauge origin. Electron correlation effects are studied at the nonrelativistic (NR) coupled-cluster singles and doubles with perturbational triples [CCSD(T)] level of theory. The fully relativistic second-order Møller-Plesset many-body perturbation (DMP2) theory is used to examine the cross coupling between correlation and relativity on NQC. The same is investigated for d and ?s by BPPT with a density functional theory model. A semiquantitative agreement between the BPPT and DHF binary property curves is obtained for d and ?s in Xe2. For these properties, the currently most complete theoretical description is obtained by a piecewise approximation where the uncorrelated relativistic DHF results obtained close to the basis-set limit are corrected, on the one hand, for NR correlation effects and, on the other hand, for the BPPT-based cross coupling of relativity and correlation. For ?ll, the fully relativistic DMP2 results obtain a correction for NR correlation effects beyond MP2. The computed temperature dependence of the second virial coefficient of the 129Xe nuclear shielding is compared to experiment in Xe gas. Our best results, obtained with the piecewise approximation for the binary chemical shift combined with the previously published state of the art theoretical potential energy curve for Xe2, are in excellent agreement with the experiment for the first time. © 2007 American Institute of Physics. [DOI: 10.1063/1.2777143]
- Published
- 2007
49. Relativistic heavy-atom effects on heavy-atom nuclear shieldings
- Author
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Perttu Lantto, Sergio S. Gomez, Gustavo A. Aucar, Juha Vaara, and Rodolfo H. Romero
- Subjects
Fermi contact interaction ,Atomic orbital ,Chemistry ,Chemical shift ,Atom ,Principal quantum number ,General Physics and Astronomy ,Physical and Theoretical Chemistry ,Atomic physics ,Valence electron ,Relativistic quantum chemistry ,Hyperfine structure - Abstract
The principal relativistic heavy-atom effects on the nuclear magnetic resonance (NMR) shielding tensor of the heavy atom itself (HAHA effects) are calculated using ab initio methods at the level of the Breit-Pauli Hamiltonian. This is the first systematic study of the main HAHA effects on nuclear shielding and chemical shift by perturbational relativistic approach. The dependence of the HAHA effects on the chemical environment of the heavy atom is investigated for the closed-shell X(2+), X(4+), XH(2), and XH(3) (-) (X=Si-Pb) as well as X(3+), XH(3), and XF(3) (X=P-Bi) systems. Fully relativistic Dirac-Hartree-Fock calculations are carried out for comparison. It is necessary in the Breit-Pauli approach to include the second-order magnetic-field-dependent spin-orbit (SO) shielding contribution as it is the larger SO term in XH(3) (-), XH(3), and XF(3), and is equally large in XH(2) as the conventional, third-order field-independent spin-orbit contribution. Considering the chemical shift, the third-order SO mechanism contributes two-thirds of the difference of approximately 1500 ppm between BiH(3) and BiF(3). The second-order SO mechanism and the numerically largest relativistic effect, which arises from the cross-term contribution of the Fermi contact hyperfine interaction and the relativistically modified spin-Zeeman interaction (FC/SZ-KE), are isotropic and practically independent of electron correlation effects as well as the chemical environment of the heavy atom. The third-order SO terms depend on these factors and contribute both to heavy-atom shielding anisotropy and NMR chemical shifts. While a qualitative picture of heavy-atom chemical shifts is already obtained at the nonrelativistic level of theory, reliable shifts may be expected after including the third-order SO contributions only, especially when calculations are carried out at correlated level. The FC/SZ-KE contribution to shielding is almost completely produced in the s orbitals of the heavy atom, with values diminishing with the principal quantum number. The relative contributions converge to universal fractions for the core and subvalence ns shells. The valence shell contribution is negligible, which explains the HAHA characteristics of the FC/SZ-KE term. Although the nonrelativistic theory gives correct chemical shift trends in present systems, the third-order SO-I terms are necessary for more reliable predictions. All of the presently considered relativistic corrections provide significant HAHA contributions to absolute shielding in heavy atoms.
- Published
- 2006
50. Calculations of nuclear quadrupole coupling in noble gas-noble metal fluorides: interplay of relativistic and electron correlation effects
- Author
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Perttu Lantto and Juha Vaara
- Subjects
Coupling constant ,Electronic correlation ,Chemistry ,Nuclear Theory ,General Physics and Astronomy ,Noble gas ,engineering.material ,Ab initio quantum chemistry methods ,Quadrupole ,Physics::Atomic and Molecular Clusters ,engineering ,Noble metal ,Physical and Theoretical Chemistry ,Atomic physics ,Relativistic quantum chemistry ,Electric field gradient - Abstract
The nuclear quadrupole coupling constants (NQCCs) of noble gas and noble metal nuclei in the recently found noble gas-noble metal fluorides (NgMF, where Ng=Ar,Kr,Xe and M=Cu,Ag,Au) are obtained theoretically by high-level ab initio calculations, where both relativistic and electron correlation effects are included, and compared to experimental results. Fully relativistic four-component Dirac-Hartree-Fock (DHF) calculations are carried out at the basis set limit for electric field gradient that couples with the electric quadrupole moment of the nucleus, and uncorrelated relativistic effects are extracted by comparing DHF results to nonrelativistic (NR) HF calculations. Electron correlation effects are investigated both at fully relativistic second-order Moller-Plesset (DMP2) and at NR MP2 levels of theory, as well as at the NR coupled-cluster singles and doubles with perturbational triples [CCSD(T)] level. The validity of the approximation where relativistic effects, on the one hand, and nonrelativistically obtained correlation effects, on the other hand, are evaluated separately and assumed to be additive, is investigated by comparison with the DMP2 results. Inclusion of relativistic effects is shown to be necessary for obtaining the correct NQCC trends as the nucleus of interest and/or its neighbors become heavier. Electron correlation treatment is needed for approaching quantitative agreement with the experimental NQCCs. The assumption of additive electron correlation and relativistic effects, corresponding to the NR correlation treatment added on top of relativistic DHF data, gives qualitatively correct noble gas NQCCs. For noble metal NQCCs, correlation treatment at the relativistic level of theory is mandatory for reaching agreement with experimental results. Current work also confirms the experimental trends of NQCCs, which have been taken as an indication of nearly covalent interaction between noble gas and noble metal in the heaviest present systems, especially in XeAuF.
- Published
- 2006
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