3,553 results on '"Pereira, Francisco"'
Search Results
2. More Experts Than Galaxies: Conditionally-overlapping Experts With Biologically-Inspired Fixed Routing
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Shaier, Sagi, Pereira, Francisco, von der Wense, Katharina, Hunter, Lawrence E, and Jones, Matt
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Computer Science - Machine Learning - Abstract
The evolution of biological neural systems has led to both modularity and sparse coding, which enables efficiency in energy usage, and robustness across the diversity of tasks in the lifespan. In contrast, standard neural networks rely on dense, non-specialized architectures, where all model parameters are simultaneously updated to learn multiple tasks, leading to representation interference. Current sparse neural network approaches aim to alleviate this issue, but are often hindered by limitations such as 1) trainable gating functions that cause representation collapse; 2) non-overlapping experts that result in redundant computation and slow learning; and 3) reliance on explicit input or task IDs that impose significant constraints on flexibility and scalability. In this paper we propose Conditionally Overlapping Mixture of ExperTs (COMET), a general deep learning method that addresses these challenges by inducing a modular, sparse architecture with an exponential number of overlapping experts. COMET replaces the trainable gating function used in Sparse Mixture of Experts with a fixed, biologically inspired random projection applied to individual input representations. This design causes the degree of expert overlap to depend on input similarity, so that similar inputs tend to share more parameters. This facilitates positive knowledge transfer, resulting in faster learning and improved generalization. We demonstrate the effectiveness of COMET on a range of tasks, including image classification, language modeling, and regression, using several popular deep learning architectures.
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- 2024
3. Climate Adaptation with Reinforcement Learning: Experiments with Flooding and Transportation in Copenhagen
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Costa, Miguel, Petersen, Morten W., Vandervoort, Arthur, Drews, Martin, Morrissey, Karyn, and Pereira, Francisco C.
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Computer Science - Machine Learning - Abstract
Due to climate change the frequency and intensity of extreme rainfall events, which contribute to urban flooding, are expected to increase in many places. These floods can damage transport infrastructure and disrupt mobility, highlighting the need for cities to adapt to escalating risks. Reinforcement learning (RL) serves as a powerful tool for uncovering optimal adaptation strategies, determining how and where to deploy adaptation measures effectively, even under significant uncertainty. In this study, we leverage RL to identify the most effective timing and locations for implementing measures, aiming to reduce both direct and indirect impacts of flooding. Our framework integrates climate change projections of future rainfall events and floods, models city-wide motorized trips, and quantifies direct and indirect impacts on infrastructure and mobility. Preliminary results suggest that our RL-based approach can significantly enhance decision-making by prioritizing interventions in specific urban areas and identifying the optimal periods for their implementation.
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- 2024
4. Nonparametric causal inference for optogenetics: sequential excursion effects for dynamic regimes
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Loewinger, Gabriel, Levis, Alexander W., and Pereira, Francisco
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Statistics - Methodology ,Statistics - Applications - Abstract
Optogenetics is a powerful neuroscience technique for studying how neural circuit manipulation affects behavior. Standard analysis conventions discard information and severely limit the scope of the causal questions that can be probed. To address this gap, we 1) draw connections to the causal inference literature on sequentially randomized experiments, 2) propose a non-parametric framework for analyzing "open-loop" (static regime) optogenetics behavioral experiments, 3) derive extensions of history-restricted marginal structural models for dynamic treatment regimes with positivity violations for "closed-loop" designs, and 4) propose a taxonomy of identifiable causal effects that encompass a far richer collection of scientific questions compared to standard methods. From another view, our work extends "excursion effect" methods, popularized recently in the mobile health literature, to enable estimation of causal contrasts for treatment sequences in the presence of positivity violations. We describe sufficient conditions for identifiability of the proposed causal estimands, and provide asymptotic statistical guarantees for a proposed inverse probability-weighted estimator, a multiply-robust estimator (for two intervention timepoints), a framework for hypothesis testing, and a computationally scalable implementation. Finally, we apply our framework to data from a recent neuroscience study and show how it provides insight into causal effects of optogenetics on behavior that are obscured by standard analyses., Comment: 52 pages, 15 figures
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- 2024
5. Near-optimal decoding algorithm for color codes using Population Annealing
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Martínez-García, Fernando, Pereira, Francisco Revson F., and Parrado-Rodríguez, Pedro
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Quantum Physics - Abstract
The development and use of large-scale quantum computers relies on integrating quantum error-correcting (QEC) schemes into the quantum computing pipeline. A fundamental part of the QEC protocol is the decoding of the syndrome to identify a recovery operation with a high success rate. In this work, we implement a decoder that finds the recovery operation with the highest success probability by mapping the decoding problem to a spin system and using Population Annealing to estimate the free energy of the different error classes. We study the decoder performance on a 4.8.8 color code lattice under different noise models, including code capacity with bit-flip and depolarizing noise, and phenomenological noise, which considers noisy measurements, with performance reaching near-optimal thresholds. This decoding algorithm can be applied to a wide variety of stabilizer codes, including surface codes and quantum low-density parity-check (qLDPC) codes., Comment: 11 pages, 9 figures
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- 2024
6. Reliability and predictability of phenotype information from functional connectivity in large imaging datasets
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Dafflon, Jessica, Moraczewski, Dustin, Earl, Eric, Nielson, Dylan M., Loewinger, Gabriel, McClure, Patrick, Thomas, Adam G., and Pereira, Francisco
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Quantitative Biology - Neurons and Cognition - Abstract
One of the central objectives of contemporary neuroimaging research is to create predictive models that can disentangle the connection between patterns of functional connectivity across the entire brain and various behavioral traits. Previous studies have shown that models trained to predict behavioral features from the individual's functional connectivity have modest to poor performance. In this study, we trained models that predict observable individual traits (phenotypes) and their corresponding singular value decomposition (SVD) representations - herein referred to as latent phenotypes from resting state functional connectivity. For this task, we predicted phenotypes in two large neuroimaging datasets: the Human Connectome Project (HCP) and the Philadelphia Neurodevelopmental Cohort (PNC). We illustrate the importance of regressing out confounds, which could significantly influence phenotype prediction. Our findings reveal that both phenotypes and their corresponding latent phenotypes yield similar predictive performance. Interestingly, only the first five latent phenotypes were reliably identified, and using just these reliable phenotypes for predicting phenotypes yielded a similar performance to using all latent phenotypes. This suggests that the predictable information is present in the first latent phenotypes, allowing the remainder to be filtered out without any harm in performance. This study sheds light on the intricate relationship between functional connectivity and the predictability and reliability of phenotypic information, with potential implications for enhancing predictive modeling in the realm of neuroimaging research.
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- 2024
7. Peregrine: ML-based Malicious Traffic Detection for Terabit Networks
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Amado, João Romeiras, Pereira, Francisco, Pissarra, David, Signorello, Salvatore, Correia, Miguel, and Ramos, Fernando M. V.
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Computer Science - Networking and Internet Architecture - Abstract
Malicious traffic detectors leveraging machine learning (ML), namely those incorporating deep learning techniques, exhibit impressive detection capabilities across multiple attacks. However, their effectiveness becomes compromised when deployed in networks handling Terabit-speed traffic. In practice, these systems require substantial traffic sampling to reconcile the high data plane packet rates with the comparatively slower processing speeds of ML detection. As sampling significantly reduces traffic observability, it fundamentally undermines their detection capability. We present Peregrine, an ML-based malicious traffic detector for Terabit networks. The key idea is to run the detection process partially in the network data plane. Specifically, we offload the detector's ML feature computation to a commodity switch. The Peregrine switch processes a diversity of features per-packet, at Tbps line rates - three orders of magnitude higher than the fastest detector - to feed the ML-based component in the control plane. Our offloading approach presents a distinct advantage. While, in practice, current systems sample raw traffic, in Peregrine sampling occurs after feature computation. This essential trait enables computing features over all traffic, significantly enhancing detection performance. The Peregrine detector is not only effective for Terabit networks, but it is also energy- and cost-efficient. Further, by shifting a compute-heavy component to the switch, it saves precious CPU cycles and improves detection throughput.
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- 2024
8. Brain morphometry and estimation of aging brain in subjects with congenital untreated isolated GH deficiency
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Villar-Gouy, Keila R., Salmon, Carlos Ernesto Garrido, Salvatori, Roberto, Kellner, Michael, Krauss, Miriam P. O., Rocha, Tâmara O., de Souza, Erick Almeida, Batista, Vanderlan O., Leal, Ângela C., Santos, Lucas B., Melo, Enaldo V., Oliveira-Santos, Alécia A., Oliveira, Carla R. P., Campos, Viviane C., Santos, Elenilde G., Santana, Nathalie O., Pereira, Francisco A., Amorim, Rivia S., Donato-Junior, José, Filho, José Augusto Soares Barreto, Santos, Antonio Carlos, and Aguiar-Oliveira, Manuel H.
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- 2024
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9. Analyzing the reporting error of public transport trips in the Danish national travel survey using smart card data
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Sfeir, Georges, Rodrigues, Filipe, Abou-Zeid, Maya, and Pereira, Francisco Camara
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- 2024
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10. Low-Weight High-Distance Error Correcting Fermionic Encodings
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Simkovic IV, Fedor, Leib, Martin, and Pereira, Francisco Revson F.
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Quantum Physics ,Condensed Matter - Strongly Correlated Electrons - Abstract
We perform an extended numerical search for practical fermion-to-qubit encodings with error correcting properties. Ideally, encodings should strike a balance between a number of the seemingly incompatible attributes, such as having a high minimum distance, low-weight fermionic logical operators, a small qubit to fermionic mode ratio and a simple qubit connectivity graph including ancilla qubits for the measurement of stabilizers. Our strategy consists of a three-step procedure in which we: first generate encodings with code distances up to $d\leq4$ by a brute-force enumeration technique; subsequently, we use these encodings as starting points and apply Clifford deformations to them which allows us to identify higher-distance codes with $d\leq7$; finally, we optimize the hardware connectivity graphs of resulting encodings in terms of the graph thickness and the number of connections per qubit. We report multiple promising high-distance encodings which significantly improve the weights of stabilizers and logical operators compared to previously reported alternatives.
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- 2024
11. Bayesian Active Learning for Censored Regression
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Hüttel, Frederik Boe, Riis, Christoffer, Rodrigues, Filipe, and Pereira, Francisco Câmara
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Computer Science - Machine Learning ,Statistics - Machine Learning - Abstract
Bayesian active learning is based on information theoretical approaches that focus on maximising the information that new observations provide to the model parameters. This is commonly done by maximising the Bayesian Active Learning by Disagreement (BALD) acquisitions function. However, we highlight that it is challenging to estimate BALD when the new data points are subject to censorship, where only clipped values of the targets are observed. To address this, we derive the entropy and the mutual information for censored distributions and derive the BALD objective for active learning in censored regression ($\mathcal{C}$-BALD). We propose a novel modelling approach to estimate the $\mathcal{C}$-BALD objective and use it for active learning in the censored setting. Across a wide range of datasets and models, we demonstrate that $\mathcal{C}$-BALD outperforms other Bayesian active learning methods in censored regression.
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- 2024
12. Interpretable factorization of clinical questionnaires to identify latent factors of psychopathology
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Lam, Ka Chun, Mahony, Bridget W, Raznahan, Armin, and Pereira, Francisco
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Computer Science - Machine Learning ,Mathematics - Numerical Analysis ,Statistics - Applications ,68 ,G.1.3 - Abstract
Psychiatry research seeks to understand the manifestations of psychopathology in behavior, as measured in questionnaire data, by identifying a small number of latent factors that explain them. While factor analysis is the traditional tool for this purpose, the resulting factors may not be interpretable, and may also be subject to confounding variables. Moreover, missing data are common, and explicit imputation is often required. To overcome these limitations, we introduce interpretability constrained questionnaire factorization (ICQF), a non-negative matrix factorization method with regularization tailored for questionnaire data. Our method aims to promote factor interpretability and solution stability. We provide an optimization procedure with theoretical convergence guarantees, and an automated procedure to detect latent dimensionality accurately. We validate these procedures using realistic synthetic data. We demonstrate the effectiveness of our method in a widely used general-purpose questionnaire, in two independent datasets (the Healthy Brain Network and Adolescent Brain Cognitive Development studies). Specifically, we show that ICQF improves interpretability, as defined by domain experts, while preserving diagnostic information across a range of disorders, and outperforms competing methods for smaller dataset sizes. This suggests that the regularization in our method matches domain characteristics. The python implementation for ICQF is available at \url{https://github.com/jefferykclam/ICQF}.
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- 2023
13. Deep Evidential Learning for Bayesian Quantile Regression
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Hüttel, Frederik Boe, Rodrigues, Filipe, and Pereira, Francisco Câmara
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Computer Science - Machine Learning ,Computer Science - Artificial Intelligence ,Statistics - Machine Learning - Abstract
It is desirable to have accurate uncertainty estimation from a single deterministic forward-pass model, as traditional methods for uncertainty quantification are computationally expensive. However, this is difficult because single forward-pass models do not sample weights during inference and often make assumptions about the target distribution, such as assuming it is Gaussian. This can be restrictive in regression tasks, where the mean and standard deviation are inadequate to model the target distribution accurately. This paper proposes a deep Bayesian quantile regression model that can estimate the quantiles of a continuous target distribution without the Gaussian assumption. The proposed method is based on evidential learning, which allows the model to capture aleatoric and epistemic uncertainty with a single deterministic forward-pass model. This makes the method efficient and scalable to large models and datasets. We demonstrate that the proposed method achieves calibrated uncertainties on non-Gaussian distributions, disentanglement of aleatoric and epistemic uncertainty, and robustness to out-of-distribution samples.
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- 2023
14. Applied metamodelling for ATM performance simulations
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Riis, Christoffer, Antunes, Francisco N., Bolić, Tatjana, Gurtner, Gérald, Cook, Andrew, Azevedo, Carlos Lima, and Pereira, Francisco Câmara
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Computer Science - Machine Learning - Abstract
The use of Air traffic management (ATM) simulators for planing and operations can be challenging due to their modelling complexity. This paper presents XALM (eXplainable Active Learning Metamodel), a three-step framework integrating active learning and SHAP (SHapley Additive exPlanations) values into simulation metamodels for supporting ATM decision-making. XALM efficiently uncovers hidden relationships among input and output variables in ATM simulators, those usually of interest in policy analysis. Our experiments show XALM's predictive performance comparable to the XGBoost metamodel with fewer simulations. Additionally, XALM exhibits superior explanatory capabilities compared to non-active learning metamodels. Using the `Mercury' (flight and passenger) ATM simulator, XALM is applied to a real-world scenario in Paris Charles de Gaulle airport, extending an arrival manager's range and scope by analysing six variables. This case study illustrates XALM's effectiveness in enhancing simulation interpretability and understanding variable interactions. By addressing computational challenges and improving explainability, XALM complements traditional simulation-based analyses. Lastly, we discuss two practical approaches for reducing the computational burden of the metamodelling further: we introduce a stopping criterion for active learning based on the inherent uncertainty of the metamodel, and we show how the simulations used for the metamodel can be reused across key performance indicators, thus decreasing the overall number of simulations needed.
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- 2023
15. Analyzing the Reporting Error of Public Transport Trips in the Danish National Travel Survey Using Smart Card Data
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Sfeir, Georges, Rodrigues, Filipe, Zeid, Maya Abou, and Pereira, Francisco Camara
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Statistics - Applications ,Economics - Econometrics ,Statistics - Other Statistics - Abstract
Household travel surveys have been used for decades to collect individuals and households' travel behavior. However, self-reported surveys are subject to recall bias, as respondents might struggle to recall and report their activities accurately. This study examines the time reporting error of public transit users in a nationwide household travel survey by matching, at the individual level, five consecutive years of data from two sources, namely the Danish National Travel Survey (TU) and the Danish Smart Card system (Rejsekort). Survey respondents are matched with travel cards from the Rejsekort data solely based on the respondents' declared spatiotemporal travel behavior. Approximately, 70% of the respondents were successfully matched with Rejsekort travel cards. The findings reveal a median time reporting error of 11.34 minutes, with an Interquartile Range of 28.14 minutes. Furthermore, a statistical analysis was performed to explore the relationships between the survey respondents' reporting error and their socio-economic and demographic characteristics. The results indicate that females and respondents with a fixed schedule are in general more accurate than males and respondents with a flexible schedule in reporting their times of travel. Moreover, trips reported during weekdays or via the internet displayed higher accuracies compared to trips reported during weekends and holidays or via telephone interviews. This disaggregated analysis provides valuable insights that could help in improving the design and analysis of travel surveys, as well accounting for reporting errors/biases in travel survey-based applications. Furthermore, it offers valuable insights underlying the psychology of travel recall by survey respondents., Comment: 38 pages, 18 figures, 12 tables
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- 2023
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16. Automatic Parallelization of Software Network Functions
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Pereira, Francisco, Ramos, Fernando M. V., and Pedrosa, Luis
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Computer Science - Networking and Internet Architecture - Abstract
Software network functions (NFs) trade-off flexibility and ease of deployment for an increased challenge of performance. The traditional way to increase NF performance is by distributing traffic to multiple CPU cores, but this poses a significant challenge: how to parallelize an NF without breaking its semantics? We propose Maestro, a tool that analyzes a sequential implementation of an NF and automatically generates an enhanced parallel version that carefully configures the NIC's Receive Side Scaling mechanism to distribute traffic across cores, while preserving semantics. When possible, Maestro orchestrates a shared-nothing architecture, with each core operating independently without shared memory coordination, maximizing performance. Otherwise, Maestro choreographs a fine-grained read-write locking mechanism that optimizes operation for typical Internet traffic. We parallelized 8 software NFs and show that they generally scale-up linearly until bottlenecked by PCIe when using small packets or by 100Gbps line-rate with typical Internet traffic. Maestro further outperforms modern hardware-based transactional memory mechanisms, even for challenging parallel-unfriendly workloads., Comment: 21 pages, 14 figures, to be published in NSDI24
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- 2023
17. Learning and Generalizing Polynomials in Simulation Metamodeling
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Hauch, Jesper, Riis, Christoffer, and Pereira, Francisco C.
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Computer Science - Machine Learning - Abstract
The ability to learn polynomials and generalize out-of-distribution is essential for simulation metamodels in many disciplines of engineering, where the time step updates are described by polynomials. While feed forward neural networks can fit any function, they cannot generalize out-of-distribution for higher-order polynomials. Therefore, this paper collects and proposes multiplicative neural network (MNN) architectures that are used as recursive building blocks for approximating higher-order polynomials. Our experiments show that MNNs are better than baseline models at generalizing, and their performance in validation is true to their performance in out-of-distribution tests. In addition to MNN architectures, a simulation metamodeling approach is proposed for simulations with polynomial time step updates. For these simulations, simulating a time interval can be performed in fewer steps by increasing the step size, which entails approximating higher-order polynomials. While our approach is compatible with any simulation with polynomial time step updates, a demonstration is shown for an epidemiology simulation model, which also shows the inductive bias in MNNs for learning and generalizing higher-order polynomials.
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- 2023
18. Efeitos da campanha de vacinacao nas internacoes e mortalidade relacionados ao sarampo no Brasil na ultima decada/Effects of the vaccination campaign on hospitalization and mortality linked to measles in Brazil in the last decade
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Loureiro, Amanda Aparecida Ribeiro, Dutra, Hadassa Franca, Goncalves, Eduarda Berberth Dias, Pereira, Francisco Otavio Silveira, Argolo, Breno Mendes, da Fonseca, Raquel Maria, and Fofano, Gisele Aparecida
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- 2024
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19. Graph Reinforcement Learning for Network Control via Bi-Level Optimization
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Gammelli, Daniele, Harrison, James, Yang, Kaidi, Pavone, Marco, Rodrigues, Filipe, and Pereira, Francisco C.
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Computer Science - Machine Learning ,Electrical Engineering and Systems Science - Systems and Control ,Mathematics - Optimization and Control - Abstract
Optimization problems over dynamic networks have been extensively studied and widely used in the past decades to formulate numerous real-world problems. However, (1) traditional optimization-based approaches do not scale to large networks, and (2) the design of good heuristics or approximation algorithms often requires significant manual trial-and-error. In this work, we argue that data-driven strategies can automate this process and learn efficient algorithms without compromising optimality. To do so, we present network control problems through the lens of reinforcement learning and propose a graph network-based framework to handle a broad class of problems. Instead of naively computing actions over high-dimensional graph elements, e.g., edges, we propose a bi-level formulation where we (1) specify a desired next state via RL, and (2) solve a convex program to best achieve it, leading to drastically improved scalability and performance. We further highlight a collection of desirable features to system designers, investigate design decisions, and present experiments on real-world control problems showing the utility, scalability, and flexibility of our framework., Comment: 9 pages, 4 figures
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- 2023
20. Learning to Control Autonomous Fleets from Observation via Offline Reinforcement Learning
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Schmidt, Carolin, Gammelli, Daniele, Pereira, Francisco Camara, and Rodrigues, Filipe
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Electrical Engineering and Systems Science - Systems and Control ,Computer Science - Machine Learning ,Computer Science - Robotics - Abstract
Autonomous Mobility-on-Demand (AMoD) systems are an evolving mode of transportation in which a centrally coordinated fleet of self-driving vehicles dynamically serves travel requests. The control of these systems is typically formulated as a large network optimization problem, and reinforcement learning (RL) has recently emerged as a promising approach to solve the open challenges in this space. Recent centralized RL approaches focus on learning from online data, ignoring the per-sample-cost of interactions within real-world transportation systems. To address these limitations, we propose to formalize the control of AMoD systems through the lens of offline reinforcement learning and learn effective control strategies using solely offline data, which is readily available to current mobility operators. We further investigate design decisions and provide empirical evidence based on data from real-world mobility systems showing how offline learning allows to recover AMoD control policies that (i) exhibit performance on par with online methods, (ii) allow for sample-efficient online fine-tuning and (iii) eliminate the need for complex simulation environments. Crucially, this paper demonstrates that offline RL is a promising paradigm for the application of RL-based solutions within economically-critical systems, such as mobility systems.
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- 2023
21. Attitudes and Latent Class Choice Models using Machine learning
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Lahoz, Lorena Torres, Pereira, Francisco Camara, Sfeir, Georges, Arkoudi, Ioanna, Monteiro, Mayara Moraes, and Azevedo, Carlos Lima
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Economics - Econometrics ,Computer Science - Machine Learning - Abstract
Latent Class Choice Models (LCCM) are extensions of discrete choice models (DCMs) that capture unobserved heterogeneity in the choice process by segmenting the population based on the assumption of preference similarities. We present a method of efficiently incorporating attitudinal indicators in the specification of LCCM, by introducing Artificial Neural Networks (ANN) to formulate latent variables constructs. This formulation overcomes structural equations in its capability of exploring the relationship between the attitudinal indicators and the decision choice, given the Machine Learning (ML) flexibility and power in capturing unobserved and complex behavioural features, such as attitudes and beliefs. All of this while still maintaining the consistency of the theoretical assumptions presented in the Generalized Random Utility model and the interpretability of the estimated parameters. We test our proposed framework for estimating a Car-Sharing (CS) service subscription choice with stated preference data from Copenhagen, Denmark. The results show that our proposed approach provides a complete and realistic segmentation, which helps design better policies., Comment: 25 pages, 8 figures
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- 2023
22. Mind the Gap: Modelling Difference Between Censored and Uncensored Electric Vehicle Charging Demand
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Hüttel, Frederik Boe, Rodrigues, Filipe, and Pereira, Francisco Câmara
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Computer Science - Artificial Intelligence ,Computer Science - Machine Learning - Abstract
Electric vehicle charging demand models, with charging records as input, will inherently be biased toward the supply of available chargers. These models often fail to account for demand lost from occupied charging stations and competitors. The lost demand suggests that the actual demand is likely higher than the charging records reflect, i.e., the true demand is latent (unobserved), and the observations are censored. As a result, machine learning models that rely on these observed records for forecasting charging demand may be limited in their application in future infrastructure expansion and supply management, as they do not estimate the true demand for charging. We propose using censorship-aware models to model charging demand to address this limitation. These models incorporate censorship in their loss functions and learn the true latent demand distribution from observed charging records. We study how occupied charging stations and competing services censor demand using GPS trajectories from cars in Copenhagen, Denmark. We find that censorship occurs up to $61\%$ of the time in some areas of the city. We use the observed charging demand from our study to estimate the true demand and find that censorship-aware models provide better prediction and uncertainty estimation of actual demand than censorship-unaware models. We suggest that future charging models based on charging records should account for censoring to expand the application areas of machine learning models in supply management and infrastructure expansion.
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- 2023
23. An Augmented Reality Intelligent Guide for the Automotive Industry
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Pereira, Francisco, Patrício, Manuel, Lopes, Rui Pedro, Leitão, Paulo, Kacprzyk, Janusz, Series Editor, Gomide, Fernando, Advisory Editor, Kaynak, Okyay, Advisory Editor, Liu, Derong, Advisory Editor, Pedrycz, Witold, Advisory Editor, Polycarpou, Marios M., Advisory Editor, Rudas, Imre J., Advisory Editor, Wang, Jun, Advisory Editor, Thiede, Sebastian, editor, and Lutters, Eric, editor
- Published
- 2024
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24. Single-Drop Microextraction
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Pena-Pereira, Francisco, de la Calle, Inmaculada, Romero, Vanesa, Lavilla, Isela, Bendicho, Carlos, Potyrailo, Radislav A., Series Editor, Rodríguez-Delgado, Miguel Ángel, editor, Socas-Rodríguez, Bárbara, editor, and Herrera-Herrera, Antonio V., editor
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- 2024
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25. Testing for context-dependent changes in neural encoding in naturalistic experiments
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Chen, Yenho, Harris, Carl W., Ma, Xiaoyu, Li, Zheng, Pereira, Francisco, and Zheng, Charles Y.
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Statistics - Machine Learning ,Computer Science - Machine Learning - Abstract
We propose a decoding-based approach to detect context effects on neural codes in longitudinal neural recording data. The approach is agnostic to how information is encoded in neural activity, and can control for a variety of possible confounding factors present in the data. We demonstrate our approach by determining whether it is possible to decode location encoding from prefrontal cortex in the mouse and, further, testing whether the encoding changes due to task engagement., Comment: 39 pages, 13 figures
- Published
- 2022
26. Determining Causality in Travel Mode Choice
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Chauhan, Rishabh Singh, Riis, Christoffer, Adhikari, Shishir, Derrible, Sybil, Zheleva, Elena, Choudhury, Charisma F., and Pereira, Francisco Camara
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Statistics - Applications - Abstract
This article presents one of the pioneering studies on causal modeling in travel mode choice decision-making using causal discovery algorithms. These models are a major advancement from conventional correlation-based techniques. We propose a novel methodology that combines causal discovery with structural equation modeling (SEM). This modeling approach overcomes some of the limitations of SEM by combining the strengths of both causal discovery and SEM. Causal discovery algorithms determine causal graphs from observational data and domain knowledge, and SEMs estimate direct causal effects and test the performance of causal discovery algorithms. In this study, we test four causal discovery algorithms: Peter-Clark (PC), Fast Causal Inference (FCI), Fast Greedy Equivalence Search (FGES), and Direct Linear Non-Gaussian Acyclic Models (DirectLiNGAM). The results show that DirectLiNGAM based SEM model best captures causality in mode choice behavior. It passes several goodness-of-fit tests, including Root Mean Square Error of Approximation (RMSEA) and Goodness-of-Fit Index (GFI), and it achieves the lowest Bayesian Information Criterion (BIC) value. The analyses are conducted on data collected from the 2017 National Household Travel Survey in the New York Metropolitan area.
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- 2022
27. Representation learning of rare temporal conditions for travel time prediction
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Petersen, Niklas, Rodrigues, Filipe, and Pereira, Francisco
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Statistics - Machine Learning ,Computer Science - Machine Learning - Abstract
Predicting travel time under rare temporal conditions (e.g., public holidays, school vacation period, etc.) constitutes a challenge due to the limitation of historical data. If at all available, historical data often form a heterogeneous time series due to high probability of other changes over long periods of time (e.g., road works, introduced traffic calming initiatives, etc.). This is especially prominent in cities and suburban areas. We present a vector-space model for encoding rare temporal conditions, that allows coherent representation learning across different temporal conditions. We show increased performance for travel time prediction over different baselines when utilizing the vector-space encoding for representing the temporal setting.
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- 2022
28. ESCOLA MODERNA E CONTEMPORÂNEA
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Silva, Amanda Tássila Gomes, primary, Santos, Antônia Maria do Carmo, additional, Medeiros, Camila Maria Resende, additional, Oliveira, Danilo Santana de, additional, Sousa, Francisco Josielson R. de, additional, Pereira, Francisco das Chagas Dias, additional, Santos, Gleiciane de Souza, additional, Cunha, Joyce Belchior Carvalho, additional, and Sousa, Maciel Costa, additional
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- 2024
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29. Bayesian Active Learning with Fully Bayesian Gaussian Processes
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Riis, Christoffer, Antunes, Francisco, Hüttel, Frederik Boe, Azevedo, Carlos Lima, and Pereira, Francisco Câmara
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Computer Science - Machine Learning - Abstract
The bias-variance trade-off is a well-known problem in machine learning that only gets more pronounced the less available data there is. In active learning, where labeled data is scarce or difficult to obtain, neglecting this trade-off can cause inefficient and non-optimal querying, leading to unnecessary data labeling. In this paper, we focus on active learning with Gaussian Processes (GPs). For the GP, the bias-variance trade-off is made by optimization of the two hyperparameters: the length scale and noise-term. Considering that the optimal mode of the joint posterior of the hyperparameters is equivalent to the optimal bias-variance trade-off, we approximate this joint posterior and utilize it to design two new acquisition functions. The first one is a Bayesian variant of Query-by-Committee (B-QBC), and the second is an extension that explicitly minimizes the predictive variance through a Query by Mixture of Gaussian Processes (QB-MGP) formulation. Across six simulators, we empirically show that B-QBC, on average, achieves the best marginal likelihood, whereas QB-MGP achieves the best predictive performance. We show that incorporating the bias-variance trade-off in the acquisition functions mitigates unnecessary and expensive data labeling., Comment: In Proceedings of Advances in Neural Information Processing Systems 35 (NeurIPS 2022)
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- 2022
30. Open vs Closed-ended questions in attitudinal surveys -- comparing, combining, and interpreting using natural language processing
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Baburajan, Vishnu, Silva, João de Abreu e, and Pereira, Francisco Camara
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Economics - General Economics ,Computer Science - Computation and Language ,Computer Science - Machine Learning - Abstract
To improve the traveling experience, researchers have been analyzing the role of attitudes in travel behavior modeling. Although most researchers use closed-ended surveys, the appropriate method to measure attitudes is debatable. Topic Modeling could significantly reduce the time to extract information from open-ended responses and eliminate subjective bias, thereby alleviating analyst concerns. Our research uses Topic Modeling to extract information from open-ended questions and compare its performance with closed-ended responses. Furthermore, some respondents might prefer answering questions using their preferred questionnaire type. So, we propose a modeling framework that allows respondents to use their preferred questionnaire type to answer the survey and enable analysts to use the modeling frameworks of their choice to predict behavior. We demonstrate this using a dataset collected from the USA that measures the intention to use Autonomous Vehicles for commute trips. Respondents were presented with alternative questionnaire versions (open- and closed- ended). Since our objective was also to compare the performance of alternative questionnaire versions, the survey was designed to eliminate influences resulting from statements, behavioral framework, and the choice experiment. Results indicate the suitability of using Topic Modeling to extract information from open-ended responses; however, the models estimated using the closed-ended questions perform better compared to them. Besides, the proposed model performs better compared to the models used currently. Furthermore, our proposed framework will allow respondents to choose the questionnaire type to answer, which could be particularly beneficial to them when using voice-based surveys.
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- 2022
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31. VICE: Variational Interpretable Concept Embeddings
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Muttenthaler, Lukas, Zheng, Charles Y., McClure, Patrick, Vandermeulen, Robert A., Hebart, Martin N., and Pereira, Francisco
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Computer Science - Machine Learning ,Statistics - Applications ,Statistics - Machine Learning - Abstract
A central goal in the cognitive sciences is the development of numerical models for mental representations of object concepts. This paper introduces Variational Interpretable Concept Embeddings (VICE), an approximate Bayesian method for embedding object concepts in a vector space using data collected from humans in a triplet odd-one-out task. VICE uses variational inference to obtain sparse, non-negative representations of object concepts with uncertainty estimates for the embedding values. These estimates are used to automatically select the dimensions that best explain the data. We derive a PAC learning bound for VICE that can be used to estimate generalization performance or determine a sufficient sample size for experimental design. VICE rivals or outperforms its predecessor, SPoSE, at predicting human behavior in the triplet odd-one-out task. Furthermore, VICE's object representations are more reproducible and consistent across random initializations, highlighting the unique advantage of using VICE for deriving interpretable embeddings from human behavior., Comment: Accepted at NeurIPS 2022
- Published
- 2022
32. Transfer learning for cross-modal demand prediction of bike-share and public transit
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Hua, Mingzhuang, Pereira, Francisco Camara, Jiang, Yu, and Chen, Xuewu
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Computer Science - Machine Learning ,Statistics - Machine Learning - Abstract
The urban transportation system is a combination of multiple transport modes, and the interdependencies across those modes exist. This means that the travel demand across different travel modes could be correlated as one mode may receive demand from or create demand for another mode, not to mention natural correlations between different demand time series due to general demand flow patterns across the network. It is expectable that cross-modal ripple effects become more prevalent, with Mobility as a Service. Therefore, by propagating demand data across modes, a better demand prediction could be obtained. To this end, this study explores various machine learning models and transfer learning strategies for cross-modal demand prediction. The trip data of bike-share, metro, and taxi are processed as the station-level passenger flows, and then the proposed prediction method is tested in the large-scale case studies of Nanjing and Chicago. The results suggest that prediction models with transfer learning perform better than unimodal prediction models. Furthermore, stacked Long Short-Term Memory model performs particularly well in cross-modal demand prediction. These results verify our combined method's forecasting improvement over existing benchmarks and demonstrate the good transferability for cross-modal demand prediction in multiple cities., Comment: 27 pages, 4 figures
- Published
- 2022
33. Balance sheet expansionary policies in the euro area: Macroeconomic impacts and a vulnerable versus non-vulnerable comparison
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Gomes-Pereira, Francisco
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- 2024
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34. Development of GC–MS coupled to GC–FID method for the quantification of cannabis terpenes and terpenoids: Application to the analysis of five commercial varieties of medicinal cannabis
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Pereira Francisco, Victor, Cerny, Muriel, Valentin, Romain, Milone-Delacourt, Franck, Paillard, Alexandra, and Alignan, Marion
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- 2024
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35. Explainable active learning metamodeling for simulations: Method and experiments for ATM performance assessment
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Riis, Christoffer, Antunes, Francisco, Bolić, Tatjana, Gurtner, Gérald, Cook, Andrew, Azevedo, Carlos Lima, and Pereira, Francisco Câmara
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- 2024
- Full Text
- View/download PDF
36. Large Scale Passenger Detection with Smartphone/Bus Implicit Interaction and Multisensory Unsupervised Cause-effect Learning
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Servizi, Valentino, Persson, Dan R., Pereira, Francisco C., Villadsen, Hannah, Bækgaard, Per, Rich, Jeppe, and Nielsen, Otto A.
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Computer Science - Machine Learning ,Computer Science - Human-Computer Interaction - Abstract
Intelligent Transportation Systems (ITS) underpin the concept of Mobility as a Service (MaaS), which requires universal and seamless users' access across multiple public and private transportation systems while allowing operators' proportional revenue sharing. Current user sensing technologies such as Walk-in/Walk-out (WIWO) and Check-in/Check-out (CICO) have limited scalability for large-scale deployments. These limitations prevent ITS from supporting analysis, optimization, calculation of revenue sharing, and control of MaaS comfort, safety, and efficiency. We focus on the concept of implicit Be-in/Be-out (BIBO) smartphone-sensing and classification. To close the gap and enhance smartphones towards MaaS, we developed a proprietary smartphone-sensing platform collecting contemporary Bluetooth Low Energy (BLE) signals from BLE devices installed on buses and Global Positioning System (GPS) locations of both buses and smartphones. To enable the training of a model based on GPS features against the BLE pseudo-label, we propose the Cause-Effect Multitask Wasserstein Autoencoder (CEMWA). CEMWA combines and extends several frameworks around Wasserstein autoencoders and neural networks. As a dimensionality reduction tool, CEMWA obtains an auto-validated representation of a latent space describing users' smartphones within the transport system. This representation allows BIBO clustering via DBSCAN. We perform an ablation study of CEMWA's alternative architectures and benchmark against the best available supervised methods. We analyze performance's sensitivity to label quality. Under the na\"ive assumption of accurate ground truth, XGBoost outperforms CEMWA. Although XGBoost and Random Forest prove to be tolerant to label noise, CEMWA is agnostic to label noise by design and provides the best performance with an 88\% F1 score., Comment: 20 pages, 13 figures, 3 tables
- Published
- 2022
37. 'Is not the truth the truth?': Analyzing the Impact of User Validations for Bus In/Out Detection in Smartphone-based Surveys
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Servizi., Valentino, Persson, Dan R., Pereira, Francisco C., Villadsen, Hannah, Bækgaard, Per, Peled, Inon, and Nielsen, Otto A.
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Computer Science - Human-Computer Interaction ,Computer Science - Machine Learning - Abstract
Passenger flow allows the study of users' behavior through the public network and assists in designing new facilities and services. This flow is observed through interactions between passengers and infrastructure. For this task, Bluetooth technology and smartphones represent the ideal solution. The latter component allows users' identification, authentication, and billing, while the former allows short-range implicit interactions, device-to-device. To assess the potential of such a use case, we need to verify how robust Bluetooth signal and related machine learning (ML) classifiers are against the noise of realistic contexts. Therefore, we model binary passenger states with respect to a public vehicle, where one can either be-in or be-out (BIBO). The BIBO label identifies a fundamental building block of continuously-valued passenger flow. This paper describes the Human-Computer interaction experimental setting in a semi-controlled environment, which involves: two autonomous vehicles operating on two routes, serving three bus stops and eighteen users, as well as a proprietary smartphone-Bluetooth sensing platform. The resulting dataset includes multiple sensors' measurements of the same event and two ground-truth levels, the first being validation by participants, the second by three video-cameras surveilling buses and track. We performed a Monte-Carlo simulation of labels-flip to emulate human errors in the labeling process, as is known to happen in smartphone surveys; next we used such flipped labels for supervised training of ML classifiers. The impact of errors on model performance bias can be large. Results show ML tolerance to label flips caused by human or machine errors up to 30%., Comment: 22 pages, 11 figures, 4 tables, 3 algorithms
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- 2022
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38. Graph Meta-Reinforcement Learning for Transferable Autonomous Mobility-on-Demand
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Gammelli, Daniele, Yang, Kaidi, Harrison, James, Rodrigues, Filipe, Pereira, Francisco C., and Pavone, Marco
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Electrical Engineering and Systems Science - Systems and Control - Abstract
Autonomous Mobility-on-Demand (AMoD) systems represent an attractive alternative to existing transportation paradigms, currently challenged by urbanization and increasing travel needs. By centrally controlling a fleet of self-driving vehicles, these systems provide mobility service to customers and are currently starting to be deployed in a number of cities around the world. Current learning-based approaches for controlling AMoD systems are limited to the single-city scenario, whereby the service operator is allowed to take an unlimited amount of operational decisions within the same transportation system. However, real-world system operators can hardly afford to fully re-train AMoD controllers for every city they operate in, as this could result in a high number of poor-quality decisions during training, making the single-city strategy a potentially impractical solution. To address these limitations, we propose to formalize the multi-city AMoD problem through the lens of meta-reinforcement learning (meta-RL) and devise an actor-critic algorithm based on recurrent graph neural networks. In our approach, AMoD controllers are explicitly trained such that a small amount of experience within a new city will produce good system performance. Empirically, we show how control policies learned through meta-RL are able to achieve near-optimal performance on unseen cities by learning rapidly adaptable policies, thus making them more robust not only to novel environments, but also to distribution shifts common in real-world operations, such as special events, unexpected congestion, and dynamic pricing schemes., Comment: 11 pages, 4 figures
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- 2022
39. Unboxing the graph: Neural Relational Inference for Mobility Prediction
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Tygesen, Mathias Niemann, Pereira, Francisco C., and Rodrigues, Filipe
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Computer Science - Machine Learning - Abstract
Predicting the supply and demand of transport systems is vital for efficient traffic management, control, optimization, and planning. For example, predicting where from/to and when people intend to travel by taxi can support fleet managers to distribute resources; better predicting traffic speeds/congestion allows for pro-active control measures or for users to better choose their paths. Making spatio-temporal predictions is known to be a hard task, but recently Graph Neural Networks (GNNs) have been widely applied on non-euclidean spatial data. However, most GNN models require a predefined graph, and so far, researchers rely on heuristics to generate this graph for the model to use. In this paper, we use Neural Relational Inference to learn the optimal graph for the model. Our approach has several advantages: 1) a Variational Auto Encoder structure allows for the graph to be dynamically determined by the data, potentially changing through time; 2) the encoder structure allows the use of external data in the generation of the graph; 3) it is possible to place Bayesian priors on the generated graphs to encode domain knowledge. We conduct experiments on two datasets, namely the NYC Yellow Taxi and the PEMS road traffic datasets. In both datasets, we outperform benchmarks and show performance comparable to state-of-the-art. Furthermore, we do an in-depth analysis of the learned graphs, providing insights on what kinds of connections GNNs use for spatio-temporal predictions in the transport domain.
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- 2022
40. Function and form of the shoulder in congenital and untreated growth hormone deficiency
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Santos, Jr, Hertz T., Silva-Albuquerque, Victor M., Salvatori, Roberto, Melo, Enaldo V., Oliveira-Santos, Alécia A., Oliveira, Carla R. P., Campos, Viviane C., Barros-Oliveira, Cynthia S., Menezes, Nelmo V., Santos, Elenilde G., Pereira, Francisco A., Santana, Nathalie O., Batista, Vanderlan O., Villar-Gouy, Keila R., Oliveira-Neto, Luiz A., and Aguiar-Oliveira, Manuel H.
- Published
- 2023
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41. Dehydrin Client Proteins Identified Using Phage Display Affinity Selected Libraries Processed With Paired-End Phage Sequencing
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Unêda-Trevisoli, Sandra Helena, Dirk, Lynnette M.A., Carlos Bezerra Pereira, Francisco Elder, Chakrabarti, Manohar, Hao, Guijie, Campbell, James M., Bassetti Nayakwadi, Sai Deepshikha, Morrison, Ashley, Joshi, Sanjay, Perry, Sharyn E., Sharma, Vijyesh, Mensah, Caleb, Willard, Barbara, de Lorenzo, Laura, Afroza, Baseerat, Hunt, Arthur G., Kawashima, Tomokazu, Vaillancourt, Lisa, Pinheiro, Daniel Guariz, and Downie, A. Bruce
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- 2024
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- View/download PDF
42. Error Probability Mitigation in Quantum Reading using Classical Codes
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Pereira, Francisco Revson Fernandes and Mancini, Stefano
- Subjects
Quantum Physics ,Computer Science - Information Theory - Abstract
A general framework describing the statistical discrimination of an ensemble of quantum channels is given by the name of quantum reading. Several tools can be applied in quantum reading to reduce the error probability in distinguishing the ensemble of channels. Classical and quantum codes can be envisioned for this goal. The aim of this paper is to present a simple but fruitful protocol for this task using classical error-correcting codes. Three families of codes are considered: Reed-Solomon codes, BCH codes, and Reed-Muller codes. In conjunction to the use of codes, we also analyze the role of the receiver. In particular, heterodyne and Dolinar receivers are taken in consideration. The encoding and measurement schemes are connected by the probing step. As probe we consider coherent states. In such simple manner, interesting results are obtained. As we show, for any fixed rate and code, there is a threshold under which using codes surpass optimal and sophisticated schemes. However, there are codes and receiver schemes giving lower thresholds. BCH codes in conjunction with Dolinar receiver turn out to be the optimal strategy for error mitigation in the quantum reading task.
- Published
- 2021
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43. Combining Discrete Choice Models and Neural Networks through Embeddings: Formulation, Interpretability and Performance
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Arkoudi, Ioanna, Azevedo, Carlos Lima, and Pereira, Francisco C.
- Subjects
Statistics - Machine Learning ,Computer Science - Machine Learning ,Economics - Econometrics ,Statistics - Methodology - Abstract
This study proposes a novel approach that combines theory and data-driven choice models using Artificial Neural Networks (ANNs). In particular, we use continuous vector representations, called embeddings, for encoding categorical or discrete explanatory variables with a special focus on interpretability and model transparency. Although embedding representations within the logit framework have been conceptualized by Pereira (2019), their dimensions do not have an absolute definitive meaning, hence offering limited behavioral insights in this earlier work. The novelty of our work lies in enforcing interpretability to the embedding vectors by formally associating each of their dimensions to a choice alternative. Thus, our approach brings benefits much beyond a simple parsimonious representation improvement over dummy encoding, as it provides behaviorally meaningful outputs that can be used in travel demand analysis and policy decisions. Additionally, in contrast to previously suggested ANN-based Discrete Choice Models (DCMs) that either sacrifice interpretability for performance or are only partially interpretable, our models preserve interpretability of the utility coefficients for all the input variables despite being based on ANN principles. The proposed models were tested on two real world datasets and evaluated against benchmark and baseline models that use dummy-encoding. The results of the experiments indicate that our models deliver state-of-the-art predictive performance, outperforming existing ANN-based models while drastically reducing the number of required network parameters.
- Published
- 2021
44. Determining causality in travel mode choice
- Author
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Chauhan, Rishabh Singh, Riis, Christoffer, Adhikari, Shishir, Derrible, Sybil, Zheleva, Elena, Choudhury, Charisma F., and Pereira, Francisco Câmara
- Published
- 2024
- Full Text
- View/download PDF
45. The twelve goals of circular analytical chemistry
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Psillakis, Elefteria and Pena-Pereira, Francisco
- Published
- 2024
- Full Text
- View/download PDF
46. Stabilizer codes for open quantum systems
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Pereira, Francisco Revson F., Mancini, Stefano, and La Guardia, Giuliano G.
- Published
- 2023
- Full Text
- View/download PDF
47. IMPACTOS DO USO DE AGROTÓXICO: UM ESTUDO SOBRE A PERCEPÇÃO DE UMA DADA COMUNIDADE RURAL DE MILAGRES - CE
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Santos, Maria Macineide dos, primary, Cruz, Alan Belizário, additional, Rodrigues, Joice Layanne Guimarães, additional, Pereira, Francisco Diego, additional, Pereira, Maria Edilania da Silva Serafim, additional, Santos, Marcos Aurélio Figueiredo dos, additional, Araújo, Nara Juliana Santos, additional, Leandro, Cícero dos Santos, additional, Souza, Jeovane Henrique de, additional, Silva, José Thyálisson da Costa, additional, Oliveira, Bruna Almeida de, additional, and Almeida-Bezerra, José Weverton, additional
- Published
- 2023
- Full Text
- View/download PDF
48. APLICAÇÃO DO MODELO OUTCOME PRESENT STATE-TEST NO CUIDADO EM PACIENTE COM FRATURA EXPOSTA DE TORNOZELO E INFECÇÃO EM LESÃO NO CALCÂNEO
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Sousa, Eduarda Nicolly dos Santos, primary, Lima, Isadora Christina da Cruz, additional, Sousa, Paloma Santos Alencar, additional, Costa, Camila de Sousa, additional, Freitas, Amanda Mendes de, additional, Santos, Luis Eduardo Soares dos, additional, Silva, Antonia Fabiana Rodrigues da, additional, and Pereira, Francisco Gilberto Fernandes, additional
- Published
- 2023
- Full Text
- View/download PDF
49. Predictive and Prescriptive Performance of Bike-Sharing Demand Forecasts for Inventory Management
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Gammelli, Daniele, Wang, Yihua, Prak, Dennis, Rodrigues, Filipe, Minner, Stefan, and Pereira, Francisco Camara
- Subjects
Mathematics - Optimization and Control ,Computer Science - Machine Learning - Abstract
Bike-sharing systems are a rapidly developing mode of transportation and provide an efficient alternative to passive, motorized personal mobility. The asymmetric nature of bike demand causes the need for rebalancing bike stations, which is typically done during night time. To determine the optimal starting inventory level of a station for a given day, a User Dissatisfaction Function (UDF) models user pickups and returns as non-homogeneous Poisson processes with piece-wise linear rates. In this paper, we devise a deep generative model directly applicable in the UDF by introducing a variational Poisson recurrent neural network model (VP-RNN) to forecast future pickup and return rates. We empirically evaluate our approach against both traditional and learning-based forecasting methods on real trip travel data from the city of New York, USA, and show how our model outperforms benchmarks in terms of system efficiency and demand satisfaction. By explicitly focusing on the combination of decision-making algorithms with learning-based forecasting methods, we highlight a number of shortcomings in literature. Crucially, we show how more accurate predictions do not necessarily translate into better inventory decisions. By providing insights into the interplay between forecasts, model assumptions, and decisions, we point out that forecasts and decision models should be carefully evaluated and harmonized to optimally control shared mobility systems., Comment: 28 pages, 6 figures
- Published
- 2021
50. Stabilizer codes for Open Quantum Systems
- Author
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Pereira, Francisco Revson F., Mancini, Stefano, and La Guardia, Giuliano G.
- Subjects
Quantum Physics ,Computer Science - Information Theory - Abstract
The Lindblad master equation describes the evolution of a large variety of open quantum systems. An important property of some open quantum systems is the existence of decoherence-free subspaces. A quantum state from a decoherence-free subspace will evolve unitarily. However, there is no procedural and optimal method for constructing a decoherence-free subspace. In this paper, we develop tools for constructing decoherence-free stabilizer codes for open quantum systems governed by Lindblad master equation. This is done by pursuing an extension of the stabilizer formalism beyond the celebrated group structure of Pauli error operators. We then show how to utilize decoherence-free stabilizer codes in quantum metrology in order to attain the Heisenberg limit scaling with low computational complexity.
- Published
- 2021
- Full Text
- View/download PDF
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