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We present a detailed study of two partial Lyman limit systems (pLLSs) of neutral hydrogen column density $N_\mathrm{H\,I}\approx(1-3)\times10^{16}\,\mathrm{cm}^{-2}$ discovered at $z=0.5$ in the Cosmic Ultraviolet Baryon Survey (CUBS). Available far-ultraviolet spectra from the Hubble Space Telescope Cosmic Origins Spectrograph and optical echelle spectra from MIKE on the Magellan Telescopes enable a comprehensive ionization analysis of diffuse circumgalactic gas based on resolved kinematics and abundance ratios of atomic species spanning five different ionization stages. These data provide unambiguous evidence of kinematically aligned multi-phase gas that masquerades as a single-phase structure and can only be resolved by simultaneous accounting of the full range of observed ionic species. Both systems are resolved into multiple components with inferred $\alpha$-element abundance varying from $[\alpha/\text{H}]\approx\!{-0.8}$ to near solar and densities spanning over two decades from $\log n_\mathrm{H}\mathrm{cm}^{-3}\approx\!-2.2$ to $<-4.3$. Available deep galaxy survey data from the CUBS program taken with VLT/MUSE, Magellan/LDSS3-C and Magellan/IMACS reveal that the $z=0.47$ system is located 55 kpc from a star-forming galaxy with prominent Balmer absorption of stellar mass $M_\star\approx2\times10^{10}M_\odot$, while the $z=0.54$ system resides in an over-dense environment of 11 galaxies within 750 kpc in projected distance, with the most massive being a luminous red galaxy of $M_\star\approx2\times10^{11}M_\odot$ at 375 kpc. The study of these two pLLSs adds to an emerging picture of the complex, multiphase circumgalactic gas that varies in chemical abundances and density on small spatial scales in diverse galaxy environments. The inhomogeneous nature of metal enrichment and density revealed in observations must be taken into account in theoretical models of diffuse halo gas., Comment: Accepted for publication in MNRAS, 27 pages, 21 figures

(Abridged) We present a systematic investigation of physical conditions and elemental abundances in four optically thick Lyman-limit systems (LLSs) at $z=0.36-0.6$ discovered within the Cosmic Ultraviolet Baryon Survey (CUBS). CUBS LLSs exhibit multi-component kinematic structure and a complex mix of multiphase gas, with associated metal transitions from multiple ionization states that span several hundred km/s in line-of-sight velocity. Specifically, higher column density components (log N(HI)>16) in all four absorbers comprise dynamically cool gas with $\langle T \rangle =(2\pm1) \times10^4\,$K and modest non-thermal broadening of $5\pm3\,$ km/s. The high quality of the QSO absorption spectra allows us to infer the physical conditions of the gas, using a detailed ionization modeling that takes into account the resolved component structures of HI and metal transitions. The range of inferred gas densities indicates that these absorbers consist of spatially compact clouds with a median line-of-sight thickness of $160^{+140}_{-50}$ pc. While obtaining robust metallicity constraints for the low-density, highly ionized phase remains challenging due to the uncertain N(HI), we demonstrate that the cool-phase gas in LLSs has a median metallicity of $\mathrm{[\alpha/H]_{1/2}}=-0.7^{+0.1}_{-0.2}$, with a 16-84 percentile range of $\mathrm{[\alpha/H]}=(-1.3,-0.1)$. Furthermore, the wide range of inferred elemental abundance ratios ($\mathrm{[C/\alpha]}$, $\mathrm{[N/\alpha]}$, and $\mathrm{[Fe/\alpha]}$) indicate a diversity of chemical enrichment histories. Combining the absorption data with deep galaxy survey data characterizing the galaxy environment of these absorbers, we discuss the physical connection between star-forming regions in galaxies and diffuse gas associated with optically thick absorption systems in the $z<1$ circumgalactic medium., Comment: Accepted for publication in MNRAS after a minor revision. 18 pages, 11 figures, and a nine-page Appendix with four additional figures

We report the serendipitous detection of an H$_{2}$-bearing damped Lyman-$\alpha$ absorber at z = 0.576 in the spectrum of the QSO J0111-0316 in the Cosmic Ultraviolet Baryon Survey. Spectroscopic observations from HST-COS in the far-ultraviolet reveal a damped absorber with log[N(HI)/cm^-2] = 20.1 +/- 0.2 and log[N(H$_{2}$)/cm^-2] = 18.97 (-0.06, +0.05). The diffuse molecular gas is found in two velocity components separated by dv = 60 km/s, with >99.9% of the total H$_{2}$ column density concentrated in one component. At a metallicity of $\approx$ 50% of solar, there is evidence for Fe enhancement and dust depletion, with a dust-to-gas ratio $\kappa_{\text{O}} \approx$ 0.4. A galaxy redshift survey conducted with IMACS and LDSS-3C on Magellan reveals an overdensity of nine galaxies at projected distance d <= 600 proper kpc (pkpc) and line-of-sight velocity offset dv$_{g}$ <= 300 km/s from the absorber. The closest is a massive, early-type galaxy at d = 41 pkpc which contains $\approx$ 70% of the total stellar mass identified at d <= 310 pkpc of the H$_{2}$ absorber. The close proximity of the H$_{2}$-bearing gas to the quiescent galaxy and the Fe-enhanced chemical abundance pattern of the absorber suggest a physical connection, in contrast to a picture in which DLAs are primarily associated with gas-rich dwarfs. This case study illustrates that deep galaxy redshift surveys are needed to gain insight into the diverse environments that host dense and potentially star-forming gas., Comment: 19 pages, 6 figures. Accepted for publication in ApJ

We present initial results from the Cosmic Ultraviolet Baryon Survey (CUBS). CUBS is designed to map diffuse baryonic structures at redshift z<~1 using absorption-line spectroscopy of 15 UV-bright QSOs with matching deep galaxy survey data. CUBS QSOs are selected based on their NUV brightness to avoid biases against the presence of intervening Lyman Limit Systems (LLSs) at zabs<1. We report five new LLSs of log N(HI)/cm^-2 >~ 17.2 over a total redshift survey pathlength of dz=9.3, and a number density of n(z)=0.43 (-0.18, +0.26). Considering all absorbers with log N(HI)/cm^-2 > 16.5 leads to n(z)=1.08 (-0.25, +0.31) at z<1. All LLSs exhibit a multi-component structure and associated metal transitions from multiple ionization states such as CII, CIII, MgII, SiII, SiIII, and OVI absorption. Differential chemical enrichment levels as well as ionization states are directly observed across individual components in three LLSs. We present deep galaxy survey data obtained using the VLT-MUSE integral field spectrograph and the Magellan Telescopes, reaching sensitivities necessary for detecting galaxies fainter than 0.1L* at d<~300 physical kpc (pkpc) in all five fields. A diverse range of galaxy properties is seen around these LLSs, from a low-mass dwarf galaxy pair, a co-rotating gaseous halo/disk, a star-forming galaxy, a massive quiescent galaxy, to a galaxy group. The closest galaxies have projected distances ranging from d=15 to 72 pkpc and intrinsic luminosities from ~0.01L* to ~3L*. Our study shows that LLSs originate in a variety of galaxy environments and trace gaseous structures with a broad range of metallicities., Comment: 26 pages, 14 figures, MNRAS in press

To establish the connection between galaxies and UV-detected absorption systems in the local universe, a deep ($g\leq20$) and wide ($\sim20^{\prime}$ radius) galaxy redshift survey is presented around 47 sight lines to UV-bright AGN observed by the Cosmic Origins Spectrograph (COS). Specific COS science team papers have used this survey to connect absorbers to galaxies, groups of galaxies, and large-scale structures, including voids. Here we present the technical details of the survey and the basic measurements required for its use, including redshifts for individual galaxies and uncertainties determined collectively by spectral class (emission-line, absorption-line, and composite spectra) and completeness for each sight line as a function of impact parameter and magnitude. For most of these sight lines the design criteria of $>90$% completeness over a $>1$ Mpc region down to $\lesssim0.1\,L^*$ luminosities at $z\leq0.1$ allows a plausible association between low-$z$ absorbers and individual galaxies. Ly$\alpha$ covering fractions are computed to approximate the star-forming and passive galaxy populations using the spectral classes above. In agreement with previous results, the covering fraction of star-forming galaxies with $L\geq0.3\,L^*$ is consistent with unity inside one virial radius and declines slowly to $>50$% at 4 virial radii. On the other hand, passive galaxies have lower covering fractions ($\sim60$%) and a shallower decline with impact parameter, suggesting that their gaseous halos are patchy but have a larger scale-length than star-forming galaxies. All spectra obtained by this project are made available electronically for individual measurement and use., Comment: Accepted by ApJS: 31 pages, 8 figures, 56 tables. The full version of Table 6 can be found at http://casa.colorado.edu/~keeney/documents/galaxy_redshifts.txt [edited to fix broken link], and the individual galaxy spectra can be downloaded from https://archive.stsci.edu/prepds/igm-gal/

We present basic data and modeling for a survey of the cool, photo-ionized Circum-Galactic Medium (CGM) of low-redshift galaxies using far-UV QSO absorption line probes. This survey consists of "targeted" and "serendipitous" CGM subsamples, originally described in Stocke et al. (2013, Paper 1). The targeted subsample probes low-luminosity, late-type galaxies at $z<0.02$ with small impact parameters ($\langle\rho\rangle = 71$ kpc), and the serendipitous subsample probes higher luminosity galaxies at $z\lesssim0.2$ with larger impact parameters ($\langle\rho\rangle = 222$ kpc). HST and FUSE UV spectroscopy of the absorbers and basic data for the associated galaxies, derived from ground-based imaging and spectroscopy, are presented. We find broad agreement with the COS-Halos results, but our sample shows no evidence for changing ionization parameter or hydrogen density with distance from the CGM host galaxy, probably because the COS-Halos survey probes the CGM at smaller impact parameters. We find at least two passive galaxies with H I and metal-line absorption, confirming the intriguing COS-Halos result that galaxies sometimes have cool gas halos despite no on-going star formation. Using a new methodology for fitting H I absorption complexes, we confirm the CGM cool gas mass of Paper 1, but this value is significantly smaller than found by the COS-Halos survey. We trace much of this difference to the specific values of the low-$z$ meta-galactic ionization rate assumed. After accounting for this difference, a best-value for the CGM cool gas mass is found by combining the results of both surveys to obtain $\log{(M/M_{\odot})}=10.5\pm0.3$, or ~30% of the total baryon reservoir of an $L \geq L^*$, star-forming galaxy., Comment: 51 pages, 20 figures, 11 tables, accepted for publication in the Astrophysical Journal Supplement Series

The relative abundances of atomic and molecular species in planet-forming disks around young stars provide important constraints on photochemical disk models and provide a baseline for calculating disk masses from measurements of trace species. A knowledge of absolute abundances, those relative to molecular hydrogen (H2), are challenging because of the weak rovibrational transition ladder of H$_{2}$ and the inability to spatially resolve different emission components within the circumstellar environment. To address both of these issues, we present new contemporaneous measurements of CO and H2 absorption through the "warm molecular layer" of the protoplanetary disk around the Classical T Tauri Star RW Aurigae A. We use a newly commissioned observing mode of the Hubble Space Telescope-Cosmic Origins Spectrograph to detect warm H2 absorption in this region for the first time. An analysis of the emission and absorption spectrum of RW Aur shows components from the accretion region near the stellar photosphere, the molecular disk, and several outflow components. The warm H2 and CO absorption lines are consistent with a disk origin. We model the 1092-1117A spectrum of RW Aur to derive log10 N(H2)~=~19.90$^{+0.33}_{-0.22}$ at T$_{rot}$(H2) ~=~440~+/-~39 K. The CO $A$~--~$X$ bands observed from 1410-1520A are best fit by log10 N(CO)~=~16.1~$^{+0.3}_{-0.5}$ at T$_{rot}$(CO) ~=~200$^{+650}_{-125}$ K. Combining direct measurements of the HI, H2, and CO column densities, we find a molecular fraction in the warm disk surface of $f_{H2}$~>=~0.47 and derive a molecular abundance ratio of CO/H2~=~1.6$^{+4.7}_{-1.3}$~x~10$^{-4}$, both consistent with canonical interstellar dense cloud values., Comment: ApJ - accepted. 13 pages, 8 figures

We use high-quality, medium-resolution {\it Hubble Space Telescope}/Cosmic Origins Spectrograph (\HST/COS) observations of 82 UV-bright AGN at redshifts $z_{AGN}<0.85$ to construct the largest survey of the low-redshift intergalactic medium (IGM) to date: 5343 individual extragalactic absorption lines in HI and 25 different metal-ion species grouped into 2610 distinct redshift systems at $z_{abs}<0.75$ covering total redshift pathlengths $\Delta z_{HI}=21.7$ and $\Delta z_{OVI}=14.5$. Our semi-automated line-finding and measurement technique renders the catalog as objectively-defined as possible. The cumulative column-density distribution of HI systems can be parametrized $dN(>N)/dz=C_{14}(N/10^{14} cm^{-2})^{-(\beta-1)}$, with $C_{14}=25\pm1$ and $\beta=1.65\pm0.02$. This distribution is seen to evolve both in amplitude, $C_{14}\sim(1+z)^{2.0\pm0.1}$, and slope $\beta(z)=1.73-0.26 z$ for $z<0.47$. We observe metal lines in 427 systems, and find that the fraction of IGM absorbers detected in metals is strongly dependent on N_{HI}. The distribution of OVI absorbers appear to evolve in the same sense as the Lya forest. We calculate contributions to $\Omega_b$ from different components of the low-$z$ IGM and determine the Lya decrement as a function of redshift. IGM absorbers are analyzed via a two-point correlation function (TPCF) in velocity space. We find substantial clustering of \HI\ absorbers on scales of $\Delta v=50-300$ km/s with no significant clustering at $\Delta v>1000$ km/s. Splitting the sample into strong and weak absorbers, we see that most of the clustering occurs in strong, $N_{HI}>10^{13.5} cm^{-2}$, metal-bearing IGM systems. The full catalog of absorption lines and fully-reduced spectra is available via MAST as a high-level science product at http://archive.stsci.edu/prepds/igm/., Comment: This is the accepted version (v3) of the paper. Previous versions (July 2015 and Feb. 2014) should be replaced by this one. In particular, please note that the associated MAST high-level-science product has been updated to reflect the of the final state of the paper. It is available at: http://archive.stsci.edu/prepds/igm/

The Circumgalactic Medium (CGM) of late-type galaxies is characterized using UV spectroscopy of 11 targeted QSO/galaxy pairs at z < 0.02 with the Hubble Space Telescope Cosmic Origins Spectrograph and ~60 serendipitous absorber/galaxy pairs at z < 0.2 with the Space Telescope Imaging Spectrograph. CGM warm cloud properties are derived, including volume filling factors of 3-5%, cloud sizes of 0.1-30 kpc, masses of 10-1e8 solar masses and metallicities of 0.1-1 times solar. Almost all warm CGM clouds within 0.5 virial radii are metal-bearing and many have velocities consistent with being bound, "galactic fountain" clouds. For galaxies with L > 0.1 L*, the total mass in these warm CGM clouds approaches 1e10 solar masses, ~10-15% of the total baryons in massive spirals and comparable to the baryons in their parent galaxy disks. This leaves >50% of massive spiral-galaxy baryons "missing". Dwarfs (<0.1 L*) have smaller area covering factors and warm CGM masses (<5% baryon fraction), suggesting that many of their warm clouds escape. Constant warm cloud internal pressures as a function of impact parameter ($P/k ~ 10 cm^{-3} K) support the inference that previous COS detections of broad, shallow O VI and Ly-alpha absorptions are of an extensive (~400-600 kpc), hot (T ~ 1e6 K) intra-cloud gas which is very massive (>1e11 solar masses). While the warm CGM clouds cannot account for all the "missing baryons" in spirals, the hot intra-group gas can, and could account for ~20% of the cosmic baryon census at z ~ 0 if this hot gas is ubiquitous among spiral groups., Comment: 34 pages, 14 figures, 8 tables; accepted for publication in ApJ

We present the most sensitive ultraviolet observations of Supernova 1987A to date. Imaging spectroscopy from the Hubble Space Telescope-Cosmic Origins Spectrograph shows many narrow (dv \sim 300 km/s) emission lines from the circumstellar ring, broad (dv \sim 10 -- 20 x 10^3 km/s) emission lines from the reverse shock, and ultraviolet continuum emission. The high signal-to-noise (> 40 per resolution element) broad LyA emission is excited by soft X-ray and EUV heating of mostly neutral gas in the circumstellar ring and outer supernova debris. The ultraviolet continuum at \lambda > 1350A can be explained by HI 2-photon emission from the same region. We confirm our earlier, tentative detection of NV \lambda 1240 emission from the reverse shock and we present the first detections of broad HeII \lambda1640, CIV \lambda1550, and NIV] \lambda1486 emission lines from the reverse shock. The helium abundance in the high-velocity material is He/H = 0.14 +/- 0.06. The NV/H-alpha line ratio requires partial ion-electron equilibration (T_{e}/T_{p} \approx 0.14 - 0.35). We find that the N/C abundance ratio in the gas crossing the reverse shock is significantly higher than that in the circumstellar ring, a result that may be attributed to chemical stratification in the outer envelope of the supernova progenitor. The N/C abundance ratio may have been stratified prior to the ring expulsion, or this result may indicate continued CNO processing in the progenitor subsequent to the expulsion of the circumstellar ring., Comment: 12 pages, 8 figures. ApJ - accepted

The Cosmic Origins Spectrograph (COS) is a moderate-resolution spectrograph with unprecedented sensitivity that was installed into the Hubble Space Telescope (HST) in May 2009, during HST Servicing Mission 4 (STS-125). We present the design philosophy and summarize the key characteristics of the instrument that will be of interest to potential observers. For faint targets, with flux F_lambda ~ 1.0E10-14 ergs/s/cm2/Angstrom, COS can achieve comparable signal to noise (when compared to STIS echelle modes) in 1-2% of the observing time. This has led to a significant increase in the total data volume and data quality available to the community. For example, in the first 20 months of science operation (September 2009 - June 2011) the cumulative redshift pathlength of extragalactic sight lines sampled by COS is 9 times that sampled at moderate resolution in 19 previous years of Hubble observations. COS programs have observed 214 distinct lines of sight suitable for study of the intergalactic medium as of June 2011. COS has measured, for the first time with high reliability, broad Lya absorbers and Ne VIII in the intergalactic medium, and observed the HeII reionization epoch along multiple sightlines. COS has detected the first CO emission and absorption in the UV spectra of low-mass circumstellar disks at the epoch of giant planet formation, and detected multiple ionization states of metals in extra-solar planetary atmospheres. In the coming years, COS will continue its census of intergalactic gas, probe galactic and cosmic structure, and explore physics in our solar system and Galaxy., Comment: 17 pages, 15 figures

Thermally-broadened Lya absorbers (BLAs) offer an alternate method to using highly-ionized metal absorbers (OVI, OVII, etc.) to probe the warm-hot intergalactic medium (WHIM, T=10^5-10^7 K). Until now, WHIM surveys via BLAs have been no less ambiguous than those via far-UV and X-ray metal-ion probes. Detecting these weak, broad features requires background sources with a well-characterized far-UV continuum and data of very high quality. However, a recent HST/COS observation of the z=0.03 blazar Mrk421 allows us to perform a metal-independent search for WHIM gas with unprecedented precision. The data have high signal-to-noise (S/N~50 per ~20 km/s resolution element) and the smooth, power-law blazar spectrum allows a fully-parametric continuum model. We analyze the Mrk421 sight line for BLA absorbers, particularly for counterparts to the proposed OVII WHIM systems reported by Nicastro et al. (2005a,b) based on Chandra/LETG observations. We derive the Lya profiles predicted by the X-ray observations. The signal-to-noise ratio of the COS data is high (S/N~25 per pixel), but much higher S/N can be obtained by binning the data to widths characteristic of the expected BLA profiles. With this technique, we are sensitive to WHIM gas over a large (N_H, T) parameter range in the Mrk421 sight line. We rule out the claimed Nicastro et al. OVII detections at their nominal temperatures (T~1-2x10^6 K) and metallicities (Z=0.1 Z_sun) at >2 sigma level. However, WHIM gas at higher temperatures and/or higher metallicities is consistent with our COS non-detections., Comment: ApJ submitted, 6.5 pages, 3 figures in ApJ format

The far-ultraviolet (FUV) channel of the Cosmic Origins Spectrograph (COS) is designed to operate between 1130{\AA} and 1850{\AA}, limited at shorter wavelengths by the reflectivity of the MgF2 protected aluminum reflective surfaces on the Optical Telescope Assembly and on the COS FUV diffraction gratings. However, because the detector for the FUV channel is windowless, it was recognized early in the design phase that there was the possibility that COS would retain some sensitivity at shorter wavelengths due to the first surface reflection from the MgF2 coated optics. Preflight testing of the flight spare G140L grating revealed ~5% efficiency at 1066{\AA}, and early on-orbit observations verified that the COS G140L/1230 mode was sensitive down to at least the Lyman limit with 10-20 cm^2 effective area between 912{\AA} and 1070{\AA}, and rising rapidly to over 1000 cm2 beyond 1150{\AA}. Following this initial work we explored the possibility of using the G130M grating out of band to provide coverage down to 900{\AA}. We present calibration results and ray trace simulations for these observing modes and explore additional configurations that have the potential to increase spectroscopic resolution, signal to noise, and observational efficiency below 1130{\AA}., Comment: 6 pages, 5 figures. To appear in 2010 HST Calibration Workshop Proceedings

We have used the Hubble/STIS and FUSE archives of ultraviolet spectra of bright AGN to identify intergalactic Lya absorbers in nearby (z < 0.1) voids. From a parent sample of 651 Lya absorbers, we identified 61 void absorbers located more than 1.4/h_70 Mpc from the nearest L* or brighter galaxy. Searching for metal absorption in high-quality (S/N > 10) spectra at the location of three diagnostic metal lines (O VI 1032, C IV 1548, Si III 1206), we detected no metal lines in any individual absorber, or in any group of absorbers using pixel co-addition techniques. The best limits on metal-line absorption in voids were set using four strong Lya absorbers with N(H I) > 10^{14} cm^-2, with 3-sigma equivalent-width limits ranging from 8 mA (O VI), 7-15 mA (C IV), and 4-10 mA (Si III). Photoionization modeling yields metallicity limits Z < 10^{-1.8+/-0.4} Z_sun, from non-detections of C IV and O VI, some 6 times lower than those seen in Lya and OVI absorbers at z < 0.1. Although the void Lya absorbers could be pristine material, considerably deeper spectra are required to rule out a universal metallicity floor produced by bursts of early star formation, with no subsequent star formation in the voids. The most consistent conclusion derived from these low-z results, and similar searches at z = 3-5, is that galaxy filaments have increased their mean IGM metallicity by factors of 30-100 since z = 3., Comment: Accepted for ApJ, 8 pages including Fig 1a,b

We detect high-velocity absorbing gas using Hubble Space Telescope and Far Ultraviolet Spectroscopic Explorer medium resolution spectroscopy along two high-latitude AGN sight lines (Mrk 1383 and PKS 2005-489) above and below the Galactic Center (GC). These absorptions are most straightforwardly interpreted as a wind emanating from the GC which does not escape from the Galaxy's gravitational potential. Spectra of four comparison B stars are used to identify and remove foreground velocity components from the absorption-line profiles of O VI, N V, C II, C III, C IV, Si II, Si III, and Si IV. Two high-velocity (HV) absorption components are detected along each AGN sight line, three redshifted and one blueshifted. Assuming that the four HV features trace a large-scale Galactic wind emanating from the GC, the blueshifted absorber is falling toward the GC at a velocity of 250 +/- 20 km/s, which can be explained by "Galactic fountain" material that originated in a bound Galactic wind. The other three absorbers represent outflowing material; the largest derived outflow velocity is +250 +/- 20 km/s, which is only 45% of the velocity necessary for the absorber to escape from its current position in the Galactic gravitational potential. All four HV absorbers are found to reach the same maximum height above the Galactic plane (|z_max| = 12 +/- 1 kpc), implying that they were all ejected from the GC with the same initial velocity. The derived metallicity limits of >10-20% Solar are lower than expected for material recently ejected from the GC unless these absorbers also contain significant amounts of hotter gas in unseen ionization stages., Comment: 39 pages, 3 figures, ApJ accepted

We combine a FUSE sample of OVI absorbers (z < 0.15) with a database of 1.07 million galaxy redshifts to explore the relationship between absorbers and galaxy environments. All 37 absorbers with N(OVI) > 10^{13.2} cm^-2 lie within 800 h_70^-1 kpc of the nearest galaxy, with no compelling evidence for OVI absorbers in voids. The OVI absorbers often appear to be associated with environments of individual galaxies. Gas with 10 +/- 5% of solar metallicity (OVI and CIII) has a median spread in distance of 350-500 kpc around L* galaxies and 200-270 kpc around 0.1 L* galaxies (ranges reflect uncertain metallicities of gas undetected in Lya absorption). In order to match the OVI line frequency, dN/dz = 20 for N(OVI) > 10^{13.2} cm^-2, galaxies with L < 0.1 L* must contribute to the cross section. The Lya absorbers with N(HI) > 10^{13.2} cm^-2 cover ~50% of the surface area of typical galaxy filaments. Two-thirds of these show OVI and/or CIII absorption, corresponding to a 33-50% covering factor at 0.1 Z_sun and suggesting that metals are spread to a maximum distance of 800 kpc, within typical galaxy supercluster filaments. Approximately 50% of the OVI absorbers have associated Lya line pairs with separations Delta V = 50-200 km/s. These pairs could represent shocks at the speeds necessary to create copious OVI, located within 100 kpc of the nearest galaxy and accounting for much of the two-point correlation function of low-z Lya forest absorbers., Comment: 14 pages, 2 figs, submitted to ApJ

We describe our surveys of low column density Lyman-alpha absorbers [N(HI) = 10^(12.5-16.0) cm^-2], which show that the warm photoionized IGM contains 30% of all baryons at z < 0.1. This fraction is consistent with cosmological simulations, which also predict that an additional 20-40% of the baryons reside in hotter 10^(5-7) K gas, the warm-hot IGM (WHIM). The observed line density of Lya absorbers, dN/dz = 170 for N(HI) > 10^(12.8) cm^-2, is dominated by low-N(HI) systems that exhibit slower redshift evolution than those with N(HI) >10^(14). HST/FUSE surveys of OVI absorbers, together with recent detections of O VII with Chandra and XMM/Newton, suggest that 20-70% of all baryons could reside in the WHIM, depending on its assumed abundance (O/H = 10% solar). At the highest column densities, N(HI) > 10^(20.3), the damped Lya systems are often identified with gas-rich disks of galaxies over a large range in luminosities (0.03-1 L*) and morphologies. Lyman-limit systems [N(HI) = 10^(17.3-20.3)] appear to be associated with bound, bright (0.1-0.3 L*) galaxy halos. The Lya absorbers with N(HI) = 10^(13-16) cm^-2 are associated with filaments of large-scale structure in the galaxy distribution, although some may arise in unbound winds from dwarf galaxies. Our discovery that ~20% of low-z Lya absorbers reside in galaxy voids suggests that a substantial fraction of baryons may be entirely unrelated to galaxies. In the future, Hubble (and FUSE) can provide a census of the local baryons and the distribution of heavy elements in the IGM. These studies can be conducted quite efficiently if NASA can install the Cosmic Origins Spectrograph (COS) on Hubble, allowing an order-of-magnitude improvement in throughput and a comparable increase in our ability to study the IGM., Comment: Replaced with updates, 25 pages, 5 figs, Proceedings STScI May 2004 Symp ("Planets to Cosmology")

We present HST STIS/G140M spectra of 15 extragalactic targets, which we combine with GHRS/G160M data to examine the statistical properties of the low-z Ly-alpha forest. We evaluate the physical properties of these Ly-alpha absorbers and compare them to their high-z counterparts. We determine that the warm, photoionized IGM contains 29+/-4% of the total baryon inventory at z = 0. We derive the distribution in column density, N_HI^(1.65+/-0.07) for 12.5 < log [N_HI] < 14.5, breaking to a flatter slope above log [N_HI] > 14.5. The slowing of the number density evolution of high-W Ly-alpha clouds is not as great as previously measured, and the break to slower evolution may occur later than previously suggested (z~1.0 rather than 1.6). We find a 7.2sigma excess in the two-point correlation function (TPCF) of Ly-alpha absorbers for velocity separations less than 260 km/s, which is exclusively due to the higher column density clouds. From our previous result that higher column density Ly-alpha clouds cluster more strongly with galaxies, this TPCF suggests a physical difference between the higher and lower column density clouds in our sample., Comment: 71 pages, 6 tables, 26 EPS figures, to appear in ApJ Supplement

We have conducted pointed redshift surveys for galaxies in the direction of bright AGN whose HST far-UV spectra contain nearby (cz <~ 30,000 kms), low column density (12.5 <= log N_{HI} (cm s^{-2}) <= 14.5) Ly-alpha forest absorption systems. Here we present results for four lines-of-sight which contain nearby (cz <~ 3000 kms) Ly-alpha absorbers in galaxy voids. Although our data go quite deep (-13 <= M_{B}(limit) <= -14) out to impact parameters of 100-250 h_{70}^{-1} kpc, these absorbers remain isolated and thus appear to be truly intergalactic, rather than part of galaxies or their halos. Since we and others have discovered no galaxies in voids, the only baryons detected in the voids are in the Ly-alpha ``clouds''. Using a photoionization model for these clouds, the total baryonic content of the voids is 4.5% +/- 1.5% of the mean baryon density., Comment: 5 pages, 1 figure, accepted for publication in Astrophysical Journal Letters

In this paper, we use large-angle, nearby galaxy redshift surveys to investigate the relationship between the 81 low-redshift Lya absorbers in our HST/GHRS survey and galaxies, superclusters, and voids. In a subsample of 46 Lya absorbers located in regions where the February 8, 2000 CfA catalog is complete down to at least L* galaxies, the nearest galaxy neighbors range from 100kpc to >10 Mpc. Of these 46 absorbers, 8 are found in galaxy voids. After correcting for pathlength and sensitivity, we find that 22+-8% of the Lya absorbers lie in voids, which requires that at least some low-column density absorbers are not extended halos of individual bright galaxies. The number density of these clouds yields a baryon fraction of 4.5+-1.5% in voids. The stronger Lya absorbers (10^{13.2-15.4} cm^-2) cluster with galaxies more weakly than galaxies cluster with each other, while the weaker absorbers (10^{12.4-13.2} cm^-2) are more randomly distributed. The median distance from a low-z Lya absorber in our sample to its nearest galaxy neighbor (~500 kpc) is twice the median distance between bright galaxies in the same survey volume. This makes any purposed "association" between these Lya absorbers and individual galaxies problematic. The suggested correlation between Lya absorber equivalent width (W) and nearest-galaxy impact parameter does not extend to W<200mA, or to impact parameters >200kpc. Instead, we find statistical support for the contention that absorbers align with large-scale filaments of galaxies. While some strong (W>400mA) Lya absorbers may be gas in the extended gaseous halos of individual galaxies, much of the local Lya "forest" appears to be associated with the large-scale structures of galaxies and some with voids., Comment: 56 pages, 13 .eps figures, 5 tables, accepted to ApJ

We present HST GHRS and STIS observations of five QSOs that probe the prominent high-velocity cloud (HVC) Complex C, covering 10% of the northern sky. Based upon a single sightline measurement (Mrk 290), a metallicity [S/H]=-1.05+/-0.12 has been associated with Complex C by Wakker et al. (1999a,b). When coupled with its inferred distance (5

Detecting HI using redshifted Ly-alpha absorption lines is 1e6 times more sensitive than using the 21cm emission line. We review recent discoveries of HI Ly-alpha absorbers made with the Hubble Space Telescope (HST) which have allowed us a first glimpse at gas in local intergalactic space between us and the ``Great Wall''. Despite its mere 2.4m aperture, HST can detect absorbers with column densities as low as those found using Keck at high-z (log N(HI)=12.5 1/cm**2). New results that will be discussed include: the evolution of absorbers with redshift, the location of absorbers relative to galaxies (including the two-point correlation function for absorbers), the metallicity of absorbers far from galaxies, and the discovery of hot 1e5-1e6 K (shock-heated?) absorbers. The unique ability of VLA HI observations in discovering the nearest galaxies to these absorbers is stressed., Comment: 9 pages, LaTeX (newpasp, included), 3 figures, also available at http://casa.colorado.edu/~bgibson/publications.html, to appear in Gas & Galaxy Evolution (ASP Conf. Series), eds. J.E. Hibbard, M.P. Rupen & J.H. van Gorkom (2001, in press)

We report on the first metallicity determination for gas in the Magellanic Stream, using archival HST GHRS data for the background targets Fairall 9, III Zw 2, and NGC 7469. For Fairall 9, using two subsequent HST revisits and new Parkes Multibeam Narrowband observations, we have unequivocally detected the MSI HI component of the Stream (near its head) in SII1250,1253 yielding a metallicity of [SII/H]=-0.55+/-0.06(r)+/-0.2(s), consistent with either an SMC or LMC origin and with the earlier upper limit set by Lu et al. (1994). We also detect the saturated SiII1260 line, but set only a lower limit of [SiII/H]>-1.5. We present serendipitous detections of the Stream, seen in MgII2796,2803 absorption with column densities of (0.5-1)x10^13 cm^-2 toward the Seyfert galaxies III Zw 2 and NGC 7469. These latter sightlines probe gas near the tip of the Stream (80 deg down-Stream of Fairall 9). For III Zw 2, the lack of an accurate HI column density and the uncertain MgIII ionization correction limits the degree to which we can constrain [Mg/H]; a lower limit of [MgII/HI]>-1.3 was found. For NGC 7469, an accurate HI column density determination exists, but the extant FOS spectrum limits the quality of the MgII column density determination, and we conclude that [MgII/HI]>-1.5. Ionization corrections associated with MgIII and HII suggest that the corresponding [Mg/H] may range lower by 0.3-1.0 dex. However, an upward revision of 0.5-1.0 dex would be expected under the assumption that the Stream exhibits a dust depletion pattern similar to that seen in the Magellanic Clouds. Remaining uncertainties do not allow us to differentiate between an LMC versus SMC origin to the Stream gas., Comment: 30 pages, 8 figures, LaTeX (aaspp4), also available at http://casa.colorado.edu/~bgibson/publications.html, accepted for publication in The Astronomical Journal

In Paper I of this series (astro-ph/9911117) we described observations of 15 extragalactic targets taken with the Hubble Space Telescope GHRS/G160M grating for studies of the low-z Lya forest. We reported the detection of 110 Lya absorbers at significance level >3 sigma in the redshift range z=0.002-0.069, over a total pathlength of 116,000 km/s. In this second paper, we evaluate the physical properties of these Lya absorbers and compare them to their high-z counterparts. The distribution of Doppler parameters is similar to that at high redshift, with mean b = 35.0 +- 16.6 km/s. The true Doppler parameter may be somewhat lower, owing to component blends and non-thermal velocities. The distribution of equivalent widths exhibits a significant break at W~133mA, with an increasing number of weak absorbers (10mA-100mA). Adopting a curve of growth with b = 25 +- 5km/s and applying a sensitivity correction as a function of equivalent width and wavelength, we derive the distribution in column density, Nh^{-1.72+-0.06} for Nh<10^14 cm^-2. We find no redshift evolution in the sample at z<0.07, but we do see a significant decline in dN/dz compared to values at z>1.6. A 3 sigma signal in the two-point correlation function of Lya absorbers for velocity separations Delta v <150 km/s is consistent with results at high-z. Applying a photoionization correction, we find that the low-z Lya forest may contain ~20% of the total number of baryons, with closure parameter Omega_lya = (0.008+-0.001), for a standard absorber size and ionizing radiation field. Some of these clouds appear to be primordial matter, owing to the lack of detected metals in a composite spectrum. Our data suggest that a fraction of the absorbers are associated with gas in galaxy associations (filaments), while a second population is distributed more uniformly., Comment: 59 pages, 22 figures, 7 tables, ApJ accepted, scheduled to appear Dec 1, 2000. Changes to the GHRS linelist (astro-ph/9911117) are reflected in this revison

We present the target selection, observations, and data reduction and analysis process for a program aimed at discovering numerous, weak (equivalent width < 100 mA) Lya absorption lines in the local Universe (0.003 < z < 0.069). The purpose of this program is to study the physical conditions of the local intergalactic medium, including absorber distributions in Doppler width and H I column density, absorber number density and evolution with redshift, line-of-sight two-point correlation function, and the baryonic content and metallicity. By making use of large-angle, nearby galaxy redshift surveys, we will investigate the relationship (if any) between these Lya absorbers and galaxies, superclusters and voids. In Paper I, we present high resolution (~19 km/s) spectroscopic observations of 15 very bright (V < 14.5) AGN targets made with the Goddard High Resolution Spectrograph (GHRS) aboard the Hubble Space Telescope (HST). We find 81 definite (> 4 sigma) and 30 possible (3-4 sigma) Lya absorption lines in these spectra, which probe a total pathlength of 116,000 km/s (delta z ~ 0.4) at very low redshift (z < 0.069) and column density (12.5< Log[Nh] < 14.5). We found numerous metal lines arising in the Milky Way halo, including absorption from 14 distinct high velocity clouds and numerous absorptions intrinsic to the target AGN. Here, we describe the details of the target selection, HST observations, and spectral reduction and analysis. We present reduced spectra and absorption line lists and ``pie diagrams'' showing the known galaxy distributions in the direction of each target. In Papers II and III, we use the data presented here to determine the basic physical characteristics of the low-z Lya forest and to investigate the relationship of the absorbers to the local galaxy distribution., Comment: 98 pages, 10 tables, 35 figures, To Appear in ApJS (Sep 2000) The continuum fits near Ly-alpha emission features are greatly improved, resulting in changes to the line lists and tables

The low-redshift Ly-alpha forest of absorption lines provides a probe of large-scale baryonic structures in the intergalactic medium, some of which may be remnants of physical conditions set up during the epoch of galaxy formation. We discuss our recent Hubble Space Telescope (HST) observations and interpretation of low-z Ly-alpha clouds toward nearby Seyferts and QSOs, including their frequency, space density, estimated mass, association with galaxies, and contribution to Omega-baryon. Our HST/GHRS detections of 70 Ly-alpha absorbers with N_HI > 10^12.6 cm-2 along 11 sightlines covering pathlength Delta(cz) = 114,000 km/s show f(>N_HI) ~ N_HI^{-0.63 +- 0.04} and a line frequency dN/dz = 200 +- 40 for N_HI > 10^12.6 cm-2 (one every 1500 km/s of redshift). A group of strong absorbers toward PKS 2155-304 may be associated with gas (400-800) h_75^-1 kpc from 4 large galaxies, with low metallicity (< 0.003 solar) and D/H < 2 x 10^-4. At low-z, we derive a metagalactic ionizing radiation field from AGN of J_0 = 1.3^{+0.8 -0.5} x 10^-23 ergs/cm2/s/Hz/sr and a Ly-alpha-forest baryon density Omega-baryon = (0.008 +- 0.004) h_75^-1 [J_-23 N_14 b_100]^{1/2} For clouds of characteristic size b = (100 kpc)b_100., Comment: 5 figures

We report observations from the Hubble Space Telescope (HST) and the VLA on the galactic environment, metallicity, and D/H in strong low-redshift Lya absorption systems toward the bright BL Lac object PKS 2155-304. GHRS/G160M spectra at 20 km/s resolution show 14 Lya absorbers, 6 clustered at cz = 16,100-18,500 km/s. ORFEUS claimed LyC absorption at z = 0.056 with N(HI) = (2-5)x10^16 cm^-2, while our Lya data suggest N(HI) = (3-10)x10^14 cm^-2. Higher columns are possible if the Lya line core at 17,000 +/- 50 km/s contains narrow HI components. We identify the Lya cluster with a group of five HI galaxies offset by 400-800 kpc from the sightline. The two strongest absorption features cover the same velocity range as the HI emission in the two galaxies closest to the line of sight. If the Lya is associated with these galaxies, they must have huge halos of highly turbulent, mostly ionized gas. The Lya absorption could also arise from an extended sheet of intragroup gas, or from smaller primordial clouds and halos of dwarf galaxies. We see no absorption from SiIII 1206, CIV 1548, or DI Lya. Photoionization models yield limits of (Si/H) < 0.003 solar, (C/H) < 0.005 solar, (D/H) < 2.8x10^-4 (4 sigma) if N(HI) = 2x10^16 cm^-2. The limits increase to 0.023 solar and D/H < 2.8x10^-3 if N(HI) = 2x10^15 cm^-2. The data suggest that the IGM in this group has not been enriched to the levels suggested by X-ray studies of intracluster gas and that these absorbers could be primordial gas clouds., Comment: 34 pages LATEX, 8 figures (.ps), accepted for Astron. J. Vol. 116, Nov. 1998

The Cosmic Origins Spectrograph (COS) is a moderate-resolution spectrograph with unprecedented sensitivity that was installed into the Hubble Space Telescope (HST) in May 2009, during HST Servicing Mission 4 (STS-125). We present the design philosophy and summarize the key characteristics of the instrument that will be of interest to potential observers. For faint targets, with flux F(sub lambda) approximates 1.0 X 10(exp -14) ergs/s/cm2/Angstrom, COS can achieve comparable signal to noise (when compared to STIS echelle modes) in 1-2% of the observing time. This has led to a significant increase in the total data volume and data quality available to the community. For example, in the first 20 months of science operation (September 2009 - June 2011) the cumulative redshift pathlength of extragalactic sight lines sampled by COS is 9 times that sampled at moderate resolution in 19 previous years of Hubble observations. COS programs have observed 214 distinct lines of sight suitable for study of the intergalactic medium as of June 2011. COS has measured, for the first time with high reliability, broad Lya absorbers and Ne VIII in the intergalactic medium, and observed the HeII reionization epoch along multiple sightlines. COS has detected the first CO emission and absorption in the UV spectra of low-mass circumstellar disks at the epoch of giant planet formation, and detected multiple ionization states of metals in extra-solar planetary atmospheres. In the coming years, COS will continue its census of intergalactic gas, probe galactic and cosmic structure, and explore physics in our solar system and Galaxy.