94 results on '"Pedro Laborda"'
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2. Identification and characterization of a stem canker and twig dieback disease of pear caused by Neofusicoccum parvum in Chinese mainland
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Feng He, Jie Yang, Yancun Zhao, Pedro Laborda, Yifan Jia, Asma Safdar, Alex Machio Kange, Bingxin Li, Lan Zhou, Quan Zeng, Sally Brown, Zheng Qing Fu, and Fengquan Liu
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Pear ,Neofusicoccum parvum ,Pathogenicity ,Susceptibility ,Plant culture ,SB1-1110 - Abstract
Abstract Pear (Pyrus spp.) is one of the most consumed fruits in China, but the pear production has to confront the growing threat from fatal diseases. In this study, we report two incidences of stem canker and twig dieback disease on pear plants, which led to death of pear seedlings (approximately 10% of total plants) in Guangxi and Jiangsu provinces. Using a combination of morphological and molecular diagnoses, along with pathogenicity test, the causal agent of the disease in these two locations was identified to be the fungus Neofusicoccum parvum. However, the isolates were divided into two clades: CY-2 isolate and other four isolates including ZL-4, BM-9, BM-10 and BM-12 might split into two groups of N. parvum. Two representative isolates (CY-2 and ZL-4) were selected for further investigation. We observed that the optimal temperature for in vitro infection on pear trees of these two isolates was at round 25 °C. Both CY-2 and ZL-4 could infect different sand pear varieties and other horticultural plants in vitro, while CY-2 had a higher virulence on several pear varieties including Nanyue, Lvyun, Qiushui and Ningmenghuang. Furthermore, the efficacy of fungicides against these two isolates was evaluated, and carbendazim and flusilazole were found to be the most effective fungicides in inhibiting the growth of these fungal pathogens. Taken together, these findings redefine the N. parvum species and provide potential strategies for the future management of this disease.
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- 2022
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3. Novel chemical- and protein-mediated methods for glucosamine detection
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Linshu Chen, Pedro Laborda, Zhipeng Cai, Andrew Kevin Hagan, Aimin Lu, Josef Voglmeir, and Li Liu
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glucosamine detection ,fluorescence labeling ,protein engineering ,assay development ,directed evolution ,Food processing and manufacture ,TP368-456 - Abstract
We describe two novel approaches for the determination of glucosamine (GlcN). The first approach is based on the chemical derivatization of GlcN with the non-fluorophor 1,3-diphenyl-1,3-propanedione (DPPD), which results in a condensation product with interesting fluorescent properties. The obtained compound was isolated by silica-gel chromatography and its structure elucidated by NMR and mass spectrometry. The second approach is based on a previously undescribed sensitivity of the enzyme glucosamine-6-phosphate deaminase (GPDA) towards GlcN, which resulted in the precipitation of the enzyme. Using a rational enzyme engineering approach and both liquid-based and plate-based screening methods, mutational GPDA variants with significantly improved precipitation properties were identified and characterized. These novel glucosamine detection methods may be a useful addition to the repertoire of currently available glucosamine detection sensors.
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- 2022
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4. Antifungal Mechanism and Efficacy of Kojic Acid for the Control of Sclerotinia sclerotiorum in Soybean
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Gui-Yang Zhu, Xin-Chi Shi, Su-Yan Wang, Bo Wang, and Pedro Laborda
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kojic acid ,Sclerotinia sclerotiorum ,antifungal activity ,melanin biosynthesis ,soybean pathogens ,Plant culture ,SB1-1110 - Abstract
Sclerotinia stem rot, which is caused by the fungal pathogen Sclerotinia sclerotiorum, is a soybean disease that results in enormous economic losses worldwide. The control of S. sclerotiorum is a difficult task due to the pathogen’s wide host range and its persistent structures, called sclerotia. In addition, there is lack of soybean cultivars with medium to high levels of resistance to S. sclerotiorum. In this work, kojic acid (KA), a natural bioactive compound commonly used in cosmetic industry, was evaluated for the management of Sclerotinia stem rot. Interestingly, KA showed strong antifungal activity against S. sclerotiorum by inhibiting chitin and melanin syntheses and, subsequently, sclerotia formation. The antifungal activity of KA was not obviously affected by pH, but was reduced in the presence of metal ions. Treatment with KA reduced the content of virulence factor oxalic acid in S. sclerotiorum secretions. Preventive applications of 50 mM KA (7.1 mg/ml) completely inhibited S. sclerotiorum symptoms in soybean; whereas, in curative applications, the combination of KA with prochloraz and carbendazim improved the efficacy of these commercial fungicides. Taken together, the antifungal activity of KA against S. sclerotiorum was studied for the first time, revealing new insights on the potential application of KA for the control of Sclerotinia stem rot in soybean.
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- 2022
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5. Evaluation of suitable reference genes for normalization of quantitative real-time PCR analysis in rice plants under Xanthomonas oryzae pv. oryzae--infection and melatonin supplementation
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Xian Chen, Pedro Laborda, Yan Dong, and Fengquan Liu
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Rice ,Xanthomonas oryzae pv. oryzae ,Melatonin ,qRT-PCR ,Reference genes ,Nutrition. Foods and food supply ,TX341-641 ,Food processing and manufacture ,TP368-456 - Abstract
Abstract Exogenous melatonin (MT) was found to be an interesting tool for enhancing the resistance of rice to Xanthomonasoryzaepv. oryzae (Xoo)-caused bacterial blight (BB). However, the accurate comparison of the expression levels across samples was a challenging task. In this work, the stability of 10 common used housekeeping genes under Xoo-infection and MT supplementation in rice was analyzed using quantitative real-time PCR (qRT-PCR), and algorithms geNorm, NormFinder and BestKeeper. Our results indicated that most reference genes remained stable in Xoo-infected rice plants, while a number of reference genes were affected by MT supplementation. Among all studied genes, the transcript levels of 18S(18S ribosomal RNA) and UBC (Ubiquitin-conjugating enzyme E2) remained unaltered by Xoo infection, while UBC and UBQ5(Ubiquitin 5) were the most stable genes when examining simultaneous Xoo-infection and MT supplementation, demonstrating that UBC is a suitable reference gene for qRT-PCR data normalization in rice under Xoo-infection and MT supplementation.
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- 2020
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6. First method for dissolving zinc thiazole and re-evaluation of its antibacterial properties against rice bacterial blight disease
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Xian Chen, Lan Zhou, Pedro Laborda, Yancun Zhao, Kaihuai Li, and Fengquan Liu
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Zinc thiazole ,Solubility ,Antibacterial effect ,Rice bacterial blight ,Xanthomonas oryzae pv. oryzae ,Plant culture ,SB1-1110 - Abstract
Abstract Rice bacterial blight (BB), caused by Xanthomonas oryzae pv. oryzae (Xoo), is one of the most destructive diseases in rice-growing regions worldwide. Zinc thiazole is a novel bactericide and has been applied for BB control for 10 years. However, zinc thiazole is highly insoluble in water and in most organic solvents. In this work, we found for the first time that zinc thiazole can be dissolved in dimethyl sulfoxide (DMSO), and the solubility of zinc thiazole in DMSO is more than 20 mg/mL. Dissolved zinc thiazole at 25 μg/mL significantly inhibited the growth of Xoo by 58.81%. Interestingly, zinc thiazole at 25 μg/mL enhanced the cell division and altered the cell wall integrity of Xoo. The application of dissolved zinc thiazole at 100 μg/mL reduced the incidence of rice bacterial blight (BB) by providing 64.71% control efficacy, while zinc thiazole as suspension concentrate (SC) at 100 μg/mL only provided 43.42% control efficacy. Taken together, this study provides for the first time a method for dissolving zinc thiazole, and may help to better understand the antibacterial mechanism of zinc thiazole.
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- 2019
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7. Peel Diffusion and Antifungal Efficacy of Different Fungicides in Pear Fruit: Structure-Diffusion-Activity Relationships
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Gui-Yang Zhu, Ying Chen, Su-Yan Wang, Xin-Chi Shi, Daniela D. Herrera-Balandrano, Victor Polo, and Pedro Laborda
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fungicides ,plant fungal pathogens ,pear fruit ,antifungal activity ,peel diffusion ,postharvest diseases ,Biology (General) ,QH301-705.5 - Abstract
Fungal pathogens can invade not only the fruit peel but also the outer part of the fruit mesocarp, limiting the efficacy of fungicides. In this study, the relationships between fungicide structure, diffusion capacity and in vivo efficacy were evaluated for the first time. The diffusion capacity from pear peel to mesocarp of 11 antifungal compounds, including p-aminobenzoic acid, carbendazim, difenoconazole, dipicolinic acid, flusilazole, gentamicin, kojic acid, prochloraz, quinolinic acid, thiophanate methyl and thiram was screened. The obtained results indicated that size and especially polarity were negatively correlated with the diffusion capacity. Although some antifungal compounds, such as prochloraz and carbendazim, were completely degraded after a few days in peel and mesocarp, other compounds, such as p-aminobenzoic acid and kojic acid, showed high stability. When applying the antifungal compounds at the EC50 concentrations, it was observed that the compounds with high diffusion capacity showed higher in vivo antifungal activity against Alternaria alternata than compounds with low diffusion capacity. In contrast, there was no relationship between stability and in vivo efficacy. Collectively, the obtained results indicated that the diffusion capacity plays an important role in the efficacy of fungicides for the control of pear fruit diseases.
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- 2022
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8. Antifungal Mechanism of Dipicolinic Acid and Its Efficacy for the Biocontrol of Pear Valsa Canker
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Xue-Ge Song, Ming-Hui Han, Feng He, Su-Yan Wang, Chao-Hui Li, Gui-Chun Wu, Zi-Gang Huang, Dong Liu, Feng-Quan Liu, Pedro Laborda, and Xin-Chi Shi
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Valsa canker ,dipicolinic acid ,fungal apoptosis ,Bacillus subtilis ,biological control ,Microbiology ,QR1-502 - Abstract
Valsa pyri is a fatal canker pathogen that causes significant reduction of crop yield in pear orchards. V. pyri invades the trunk phloem, and is difficult to control by chemical treatment. In this work, it was found for the first time that Bacillus subtilis-produced dipicolinic acid (DPA) exhibits antifungal activity against different canker pathogens, including Alteraria alternata, Botryosphaeria dothidea, Rhizoctonia solani, and V. pyri. Growth inhibition of V. pyri was observed at less than 5 mM concentration (pH = 5.6). DPA showed the highest antifungal activity at acidic pH values and in the presence of bivalent metals, such as zinc(II), cobalt(II), and copper(II). Measurement of mRNA expression levels and scanning electron microscope (SEM) observations revealed that DPA causes V. pyri apoptosis via inhibition of chitin biosynthesis and subsequent cell lysis. Interestingly, DPA showed high stability in the pear bark and was able to cross the pear tree bark into the phloem, protecting the internal phases of the pear trunk. In preventive applications, DPA reduced the canker symptoms of V. pyri on Cuigan pear trees by 90%. Taken together, an efficient strategy for the management of V. pyri-caused canker disease was developed using a novel antifungal agent, DPA, with strong antifungal activity and particular diffusion properties.
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- 2020
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9. LbDSF, the Lysobacter brunescens Quorum-Sensing System Diffusible Signaling Factor, Regulates Anti- Xanthomonas XSAC Biosynthesis, Colony Morphology, and Surface Motility
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Jun Ling, Runjie Zhu, Pedro Laborda, Tianping Jiang, Yifan Jia, Yangyang Zhao, and Fengquan Liu
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diffusible signaling factor ,anti-Xanthomonas compound ,colony morphology ,surface motility ,Lysobacter brunescens ,Microbiology ,QR1-502 - Abstract
Lysobacter species are emerging as novel sources of antibiotics, but the regulation of these antibiotics has not been thoroughly elucidated to date. In this work, we identified a small diffusible signaling factor (DSF) molecule (LbDSF) that regulates the biosynthesis of a novel Xanthomonas-specific antibiotic compound (XSAC) in Lysobacter brunescens OH23. LbDSF was isolated from the culture broth of L. brunescens OH23, and the chemical structure of the molecule was determined by NMR and MS. The LbDSF compound induced GUS expression in a reporter strain of Xanthomonas campestris pv. campestris FE58, which contained the gus gene under the control of a DSF-inducible engXCA promoter. LbDSF production was found to be linked to the enoyl-CoA hydratase RpfF and dependent on the two-component regulatory system RpfC (hybrid sensor histidine kinase)/RpfG (response regulator), and LbDSF production was increased 6.72 times in the ΔrpfC compared to wild-type OH23. LbDSF-regulated XSAC production was dramatically decreased in ΔrpfF, ΔrpfC, and ΔrpfG. Additionally, a significant reduction in surface motility and a number of changes in colony morphology was observed in the ΔrpfF, ΔrpfC, and ΔrpfG compared to the wild-type OH23. The exogenous LbDSF significantly increased XSAC production in wild-type OH23 and recovered the XSAC biosynthetic ability in ΔrpfF. Taken together, these results showed that LbDSF is a fatty-acid-derived DSF that positively regulates XSAC biosynthesis, cell morphology, and surface motility. Moreover, the RpfC/RpfG quorum-sensing signal transduction pathway mediates XSAC biosynthesis. These findings may facilitate antibiotic production through genetic engineering in Lysobacter spp.
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- 2019
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10. Pseudomonas putida Represses JA- and SA-Mediated Defense Pathways in Rice and Promotes an Alternative Defense Mechanism Possibly through ABA Signaling
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Rui Wang, Hai-Lin Wang, Rui-Ping Tang, Meng-Ying Sun, Tang-Min Chen, Xu-Chu Duan, Xiao-Feng Lu, Dong Liu, Xin-Chi Shi, Pedro Laborda, and Su-Yan Wang
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Oryza sativa ,plant growth-promoting rhizobacteria ,plant–rhizobacteria interaction ,plant defense ,abscisic acid ,Botany ,QK1-989 - Abstract
The signaling pathways induced by Pseudomonas putida in rice plants at the early plant–rhizobacteria interaction stages, with and without inoculation of Xanthomonas oryzae pv. oryzae, were studied. In the absence of pathogen, P. putida reduced ethylene (ET) production, and promoted root and stem elongation. Interestingly, gene OsHDA702, which plays an important role in root formation, was found significantly up-regulated in the presence of the rhizobacterium. Although X. oryzae pv. oryzae inoculation enhanced ET production in rice plants, P. putida treatment repressed ET-, jasmonic acid (JA)- and salicylic acid (SA)-mediated defense pathways, and induced the biosynthesis of abscisic acid (ABA), and the overexpression of OsHDA705 and some pathogenesis-related proteins (PRs), which in turn increased the susceptibility of the rice plants against the pathogen. Collectively, this is the first work on the defense signaling induced by plant growth-promoting rhizobacteria in plants at the early interaction stages, and suggests that rhizobacteria stimulate an alternative defense mechanism in plants based on ABA accumulation and OsHDA705 signaling.
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- 2020
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11. Melatonin Treatment Inhibits the Growth of Xanthomonas oryzae pv. oryzae
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Xian Chen, Cheng Sun, Pedro Laborda, Yancun Zhao, Ian Palmer, Zheng Qing Fu, Jingping Qiu, and Fengquan Liu
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melatonin ,Xanthomonas oryzae pv. oryzae ,antibacterial action ,growth ,transcriptome ,Microbiology ,QR1-502 - Abstract
Xanthomonas oryzae pv. oryzae (Xoo) causes rice bacterial blight (BB), one of the most widespread and destructive diseases in rice-growing regions worldwide. Melatonin enhances pathogen resistance by inducing plant innate immunity, but the direct effect of melatonin on plant pathogenic bacteria is poorly understood. In this study, we investigated the direct effects of melatonin on Xoo. Exogenous melatonin at 200 μg/mL significantly inhibited the proliferation of Xoo and reduced the mRNA expression of five genes involved in cell division. This concentration of melatonin also inhibited the motility and biofilm formation of Xoo. Notably, melatonin was observed to alter the length of Xoo cells. To provide deeper insights into the mechanisms underlying this antibacterial activity, we examined global gene expression changes in Xoo strain PXO99 in response to the application of 200 μg/mL melatonin using RNA sequencing (RNA-Seq). A wide range of differentially expressed genes (DEGs) related to catalytic activity and metal-binding activity were downregulated in Xoo cells in response to the melatonin treatment. In addition, DEGs responsible for carbohydrate and amino acid metabolism were also downregulated. These results suggest that the inhibitory mechanism of melatonin on Xoo proliferation may involve the regulation of cell division in combination with a reduction in the concentration or activity of enzymes involved in metabolism.
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- 2018
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12. Enzymatic Synthesis of Trideuterated Sialosides
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Zhi-P. Cai, Louis P. Conway, Ying Y. Huang, Wen J. Wang, Pedro Laborda, Ting Wang, Ai M. Lu, Hong L. Yao, Kun Huang, Sabine L. Flitsch, Li Liu, and Josef Voglmeir
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N-glycolylneuraminic acid ,isotope labeled carbohydrates ,sialic acid quantification ,sialic acid biosynthesis ,Organic chemistry ,QD241-441 - Abstract
Sialic acids are a family of acidic monosaccharides often found on the termini of cell surface proteins or lipid glycoconjugates of higher animals. Herein we describe the enzymatic synthesis of the two isotopically labeled sialic acid derivatives d3-X-Gal-α-2,3-Neu5Ac and d3-X-Gal-α-2,3-Neu5Gc. Using deuterium oxide as the reaction solvent, deuterium atoms could be successfully introduced during the enzymatic epimerization and aldol addition reactions when the sialosides were generated. NMR and mass spectrometric analyses confirmed that the resulting sialosides were indeed tri-deuterated. These compounds may be of interest as internal standards in liquid chromatography/mass spectrometric assays for biochemical or clinical studies of sialic acids. This was further exemplified by the use of this tri-deuterated sialosides as internal standards for the quantification of sialic acids in meat and egg samples.
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- 2019
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13. N-acetylglucosamine 2-Epimerase from Pedobacter heparinus: First Experimental Evidence of a Deprotonation/Reprotonation Mechanism
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Su-Yan Wang, Pedro Laborda, Ai-Min Lu, Xu-Chu Duan, Hong-Yu Ma, Li Liu, and Josef Voglmeir
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sialic acid metabolism ,N-acetylglucosamine 2-epimerase ,deprotonation/reprotonation mechanism ,Neu5Ac analogues ,synthesis of sialic acid analogues ,Chemical technology ,TP1-1185 ,Chemistry ,QD1-999 - Abstract
The control of cellular N-acetylmannosamine (ManNAc) levels has been postulated to be an effective way to modulate the decoration of cell surfaces with sialic acid. N-acetylglucosamine 2-epimerase catalyzes the interconversion of N-acetylglucosamine (GlcNAc) and ManNAc. Herein, we describe the cloning, expression, purification and biochemical characterization of an unstudied N-acetylglucosamine 2-epimerase from Pedobacter heparinus (PhGn2E). To further characterize the enzyme, several N-acylated glucosamine derivatives were chemically synthesized, and subsequently used to test the substrate specificity of PhGn2E. Furthermore, NMR studies of deuterium/hydrogen exchange at the anomeric hydroxy group and C-2 positions of the substrate in the reaction mixture confirmed for the first time the postulated epimerization reaction via ring-opening/enolate formation. Site-directed mutagenesis of key residues in the active site showed that Arg63 and Glu314 are directly involved in proton abstraction and re-incorporation onto the substrate. As all mechanistically relevant active site residues also occur in all mammalian isoforms, PhGn2E can serve as a model N-acetylglucosamine 2-epimerase for further elucidation of the active site mechanism in these enzymes.
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- 2016
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14. Influenza Neuraminidase Inhibitors: Synthetic Approaches, Derivatives and Biological Activity
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Pedro Laborda, Su-Yan Wang, and Josef Voglmeir
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influenza treatment ,neuraminidase inhibitors ,organic synthesis ,total synthesis ,sialic acid analogues ,Organic chemistry ,QD241-441 - Abstract
Despite being a common viral disease, influenza has very negative consequences, causing the death of around half a million people each year. A neuraminidase located on the surface of the virus plays an important role in viral reproduction by contributing to the release of viruses from infected host cells. The treatment of influenza is mainly based on the administration of neuraminidase inhibitors. The neuraminidase inhibitors zanamivir, laninamivir, oseltamivir and peramivir have been commercialized and have been demonstrated to be potent influenza viral neuraminidase inhibitors against most influenza strains. In order to create more potent neuraminidase inhibitors and fight against the surge in resistance resulting from naturally-occurring mutations, these anti-influenza drugs have been used as templates for the development of new neuraminidase inhibitors through structure-activity relationship studies. Here, we review the synthetic routes to these commercial drugs, the modifications which have been performed on these structures and the effects of these modifications on their inhibitory activity.
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- 2016
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15. Application of chitosan nanoparticles in quality and preservation of postharvest fruits and vegetables: A review
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Su‐Yan Wang, Daniela D. Herrera‐Balandrano, Yong‐Hui Jiang, Xin‐Chi Shi, Xin Chen, Feng‐Quan Liu, and Pedro Laborda
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Food Science - Published
- 2023
16. ACC deaminase-encoding Pseudomonas putida arrests seed germination: an alternative strategy for grass and weed control
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Di Zhou, Jia-Ling Zhao, Rui Wang, Hai-Lin Wang, Daniela D. Herrera-Balandrano, Tang-Min Chen, Xiao-Feng Lu, Xu-Chu Duan, Mahdi Shahriar, Xin-Chi Shi, Pedro Laborda, and Su-Yan Wang
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Soil Science ,Plant Science - Published
- 2022
17. Exogenous genistein enhances soybean resistance to Xanthomonas axonopodis pv. glycines
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Yun-Jiao, Zhang, Yi-Bo, Pang, Xin-Yi, Wang, Yong-Hui, Jiang, Daniela D, Herrera-Balandrano, Yan, Jin, Su-Yan, Wang, and Pedro, Laborda
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Insect Science ,Glycine ,Xanthomonas axonopodis ,Fabaceae ,Soybeans ,General Medicine ,Genistein ,Isoflavones ,Agronomy and Crop Science ,Disease Resistance ,Plant Diseases - Abstract
Xanthomonas axonopodis pv. glycines (Xag) is the causal agent of bacterial pustule disease and results in enormous losses in soybean production. Although isoflavones are known to be involved in soybean resistance against pathogen infection, the effects of exogenous isoflavones on soybean plants remain unexplored.Irrigation of soybean plants with isoflavone genistein inhibited plant growth for short periods, probably by inhibiting the tyrosine (brassinosteroids) kinase pathway, and increased disease resistance against Xag. The number of lesions was reduced by 59%-63% when applying 50 μg mlThe effects of exogenous genistein on soybean plants were examined for the first time, revealing new insights into the roles of isoflavones in soybean defense and demonstrating that irrigation with genistein can be a suitable method to induce disease resistance in soybean plants. © 2022 Society of Chemical Industry.
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- 2022
18. Metabolic and Transcriptional Analysis of Recombinant Saccharomyces Cerevisiae for Xylose Fermentation: A Feasible and Efficient Approach
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Pedro Laborda, Ting Wang, Yan Zhang, Xiangchen Wang, Xin-Chi Shi, Haibin Lv, and Tingting Duan
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Saccharomyces cerevisiae ,Health Informatics ,Xylose ,Pentose phosphate pathway ,Xylitol ,Pichia ,Candida tropicalis ,chemistry.chemical_compound ,Health Information Management ,Aldehyde Reductase ,Electrical and Electronic Engineering ,Pichia stipitis ,Candida ,biology ,D-Xylulose Reductase ,biology.organism_classification ,Computer Science Applications ,carbohydrates (lipids) ,chemistry ,Biochemistry ,Xylulokinase ,Fermentation - Abstract
Lignocellulose is an abundant xylose-containing biomass found in agricultural wastes, and has arisen as a suitable alternative to fossil fuels for the production of bioethanol. Although Saccharomyces cerevisiae has been thoroughly used for the production of bioethanol, its potential to utilize lignocellulose remains poorly understood. In this work, xylose-metabolic genes of Pichia stipitis and Candida tropicalis, under the control of different promoters, were introduced into S. cerevisiae. RNA-seq analysis was use to examine the response of S. cerevisiae metabolism to the introduction of xylose-metabolic genes. The use of the PGK1 promoter to drive xylitol dehydrogenase (XDH) expression, instead of the TEF1 promoter, improved xylose utilization in ?XR-pXDH? strain by overexpressing xylose reductase (XR) and XDH from C. tropicalis, enhancing the production of xylitol (13.66 ? 0.54 g/L after 6 days fermentation). Overexpression of xylulokinase and XR/XDH from P. stipitis remarkably decreased xylitol accumulation (1.13 ? 0.06 g/L and 0.89 ? 0.04 g/L xylitol, respectively) and increased ethanol production (196.14% and 148.50% increases during the xylose utilization stage, respectively), in comparison with the results of XR-pXDH. This result may be produced due to the enhanced xylose transport, Embden?Meyerhof and pentose phosphate pathways, as well as alleviated oxidative stress. The low xylose consumption rate in these recombinant strains comparing with P. stipitis and C. tropicalis may be explained by the insufficient supplementation of NADPH and NAD+. The results obtained in this work provide new insights on the potential utilization of xylose using bioengineered S. cerevisiae strains.
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- 2022
19. Dipicolinic acid enhances kiwifruit resistance to Botrytis cinerea by promoting phenolics accumulation
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Su‐Yan Wang, Yi‐Bo Pang, Yuan Tao, Xin‐Chi Shi, Yun‐Jiao Zhang, Yan‐Xia Wang, Yong‐Hui Jiang, Xin‐Yu Ji, Bing‐Lin Wang, Daniela D. Herrera‐Balandrano, and Pedro Laborda
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Insect Science ,General Medicine ,Agronomy and Crop Science - Published
- 2023
20. Occurrence of isoflavones in soybean sprouts and strategies to enhance their content: A review
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Su‐Yan Wang, Yun‐Jiao Zhang, Gui‐Yang Zhu, Xin‐Chi Shi, Xin Chen, Daniela D. Herrera‐Balandrano, Feng‐Quan Liu, and Pedro Laborda
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Glucosides ,Seeds ,Soybeans ,Isoflavones ,Antioxidants ,Food Science - Abstract
Sprouting is a common strategy to enhance the nutritional value of seeds. Here, all the reports regarding the occurrence of isoflavones in soybean sprouts have been covered for the first time. Isoflavones were detected with concentrations ranging from 1 × 10
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- 2022
21. First Report of Penicillium oxalicum Causing Leaf Blight on Maize in China
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Jiaxin Han, Shiling Zhang, Xinchi Shi, Daniela D. Herrera-Balandrano, Suyan Wang, and Pedro Laborda
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Plant Science ,Agronomy and Crop Science - Abstract
In August 2022, two-month-old maize plants (Zea mays cv. ‘Zihei’; “Chinese purple corn”) exhibited irregular lesions on leaves and leaf blight symptoms (Figure 1). Although the lesions were yellow at the early infection stages, they turned brown during the pathogen advancement and culminated in leaf blight. Nearly 60% of plants from a non-commercial maize field (0.2 ha) in south-eastern Jiangsu (Nantong municipality, China; 120.54º E, 31.58º N) exhibited brown lesions, and about 4% of the diseased plants showed advanced leaf blight symptoms. The disease resulted in approximately a 9% yield loss compared to previous years when no disease symptoms were observed. Thirty small leaf pieces, approximately 0.3 cm2 in size and showing disease symptoms, were surface sterilized in 1.5% NaOCl for 1 min and washed twice with sterile ddH2O. The pathogen was cultured on PDA medium in the dark at 25 ºC, with grayish colonies observed after 5 days. Morphological analysis showed the presence of round/oval conidia (8.81 ± 0.50 μm diameter; n = 86) and branched conidiophores, which was consistent with the morphology of Penicillium spp. (Visagie et al. 2014). Nine representative isolates were obtained from different leaf pieces via single spore isolation, and the internal transcribed spacer (ITS), β-tubulin (TUB2) and calmodulin (CMD) genes were amplified using ITS1/ITS4, BT2a/BT2b and CMD5/CMD6 primers, respectively. The obtained ITS (OP954496-OP954497 and OP942428-OP942434), TUB2 (OP966781-OP966784 and OQ025045-OQ025049) and CMD (OQ078664-OQ078672) sequences were submitted in GenBank. Two isolates belonged to the P. citrinum species, while seven of the isolates belonged to the P. oxalicum species. A blast search revealed that the obtained P. citrinum ITS and CMD sequences had 99.39% and 100% homology to the ex-type strain P. citrinum NRRL 1841; GenBank numbers: AF033422 and GU944638 (Peterson & Horn 2009). Additionally, the obtained P. oxalicum ITS and CMD sequences had 99.82-100% and 94.64-95.49% homology to the ex-type strain P. oxalicum NRRL 787; GenBank numbers: AF033438 and KF296367 (Visagie et al. 2015). A molecular phylogenetic tree was constructed using MEGA7 to confirm the identity of the pathogen (Figure 2). To confirm pathogenicity, 3-week-old healthy ‘Zihei’ plants were used. The leaves were sprayed with aqueous solutions (sterilized ddH2O) that contained 1 × 106 spores/mL of each isolate. For the control experiment, sterilized ddH2O was used. After 5 days in a growth chamber at 25 ºC and 70% relative humidity, yellow lesions were observed. The number of lesions was higher when inoculating with P. oxalicum than when inoculating with P. citrinum. This result, together with the higher occurrence of P. oxalicum isolates, suggests that P. oxalicum is the main species causing the disease symptoms. The pathogen was recovered from the infected plants, and its identity was confirmed by ITS sequencing and morphological analysis. As far as we know, this is the first report of P. citrinum and P. oxalicum causing maize leaf blight worldwide. These species have previously been associated with maize kernels, as a source of mycotoxins posing relevant hazards to human health (Keller et al. 2013; Yang et al. 2020). P. citrinum was recently identified as the causal agent of green mold on Dictyophora rubrovalvata in China (Qin et al. 2022), while P. oxalicum was reported to cause citrus rot, pineapple leaf spot, and blue mold on Gastrodia elata, Astralagus membranaceus and muskmelon (Tang et al. 2020; Wu et al. 2022; Zheng et al. 2022). China is one of the world’s largest producers of maize, harvesting more than 171 million tons in 2021. This report will help to better understand the pathogens that affect China’s maize production.
- Published
- 2023
22. Molecular Cloning and Characterization of a Serotonin N-Acetyltransferase Gene, xoSNAT3, from Xanthomonas oryzae pv. oryzae
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Xian Chen, Yancun Zhao, Pedro Laborda, Yong Yang, and Fengquan Liu
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melatonin biosynthesis ,xoSNAT3 ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Xoo ,serotonin N-acetyltransferase ,Oryza sativa - Abstract
Rice bacterial blight (BB), caused by Xanthomonas oryzae pv. oryzae (Xoo), is one of the top ten bacterial plant diseases worldwide. Serotonin N-acetyltransferase (SNAT) is one of the key rate-limiting enzymes in melatonin (MT) biosynthesis. However, its function in pathogenic bacteria remains unclear. In this study, a Xoo SNAT protein (xoSNAT3) that showed 27.39% homology with sheep SNAT was identified from a collection of 24 members of GCN5-related N-acetyltransferase (GNAT) superfamily in Xoo. This xoSNAT3 could be induced by MT. In tobacco-based transient expression system, xoSNAT3 was found localized on mitochondria. In vitro studies indicated that xoSNAT3 showed the optima enzymatic activity at 50 °C. The recombinant enzyme showed Km and Vmax values of 709.98 μM and 2.21 nmol/min/mg protein, respectively. Mutant △xoSNAT3 showed greater impaired MT biosynthesis than the wild-type strain. Additionally, △xoSNAT3 showed 14.06% less virulence and 26.07% less biofilm formation. Collectively, our results indicated that xoSNAT3 services as a SNAT involved in MT biosynthesis and pathogenicity in Xoo.
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- 2023
- Full Text
- View/download PDF
23. Application of surface-enhanced Raman spectroscopy using silver and gold nanoparticles for the detection of pesticides in fruit and fruit juice
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Yun-Jiao Zhang, Xin-Chi Shi, Yi-Dong Zhou, Pedro Laborda, Fengquan Liu, Da-Yong Jin, Su-Yan Wang, and Gui-Yang Zhu
- Subjects
Detection limit ,Chromatography ,Pesticide residue ,Chemistry ,Surface-enhanced Raman spectroscopy ,Pesticide ,Silver nanoparticle ,symbols.namesake ,Colloidal gold ,symbols ,Sample preparation ,Raman spectroscopy ,Food Science ,Biotechnology - Abstract
Background Pesticide residues are known to cause serious problems to human health. Although the detection of pesticides in fruit and fruit juice has been traditionally attempted using chromatographic techniques, surface-enhanced Raman spectroscopy (SERS) has recently arisen as a suitable alternative for the detection of organic compounds in biological matrices. Scope and approach All reported methods for the detection of pesticides in fruit and fruit juice, based on SERS enhanced with gold and silver nanoparticles, are covered for the first time. The detection parameters obtained using different experimental conditions are compared throughout the manuscript. The achievements and limitations of this technique for the detection of pesticides in fruit and fruit juice are discussed. Key findings and conclusions A variety of sample preparation steps, scaffolds for the deposition of nanoparticles, nanoparticles with different shapes and decorations, and metal combinations were screened across the reports. The decoration of the nanoparticles with organic structures, such as mercaptooctanone and polyvinyl alcohol, and combinations with WO3, WS2 and MoS2 provided high sensitivity and stability. The developed methods were used for the detection and quantification of numerous pesticides in different matrices and showed similar limits of detection in comparison with traditional chromatographic methods. Interestingly, SERS allowed the detection of cations and organometallic structures that are difficult to detect with other techniques. In contrast with traditional methods, methods based on Raman spectroscopy allow the detection of only one or a few pesticides simultaneously, and the simultaneous quantification of several pesticides requires the introduction of a preliminary separation step.
- Published
- 2021
24. Mode of action and efficacy of quinolinic acid for the control of <scp> Ceratocystis fimbriata </scp> on sweet potato
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Su-Yan Wang, Pablo Laborda, Fengquan Liu, Dong-Jing Yang, Yi-Dong Zhou, Xin-Chi Shi, Pedro Laborda, Chen Ying, Xian Chen, Hai-Lin Wang, and Rui Wang
- Subjects
0106 biological sciences ,Ergosterol ,biology ,Carbendazim ,Lanosterol ,General Medicine ,Quinolinic Acid ,biology.organism_classification ,01 natural sciences ,Ceratocystis ,Spore ,Microbiology ,Fungicide ,010602 entomology ,chemistry.chemical_compound ,Ascomycota ,chemistry ,Insect Science ,Ceratocystis fimbriata ,Ipomoea batatas ,Mode of action ,Agronomy and Crop Science ,Mycelium ,Plant Diseases ,010606 plant biology & botany - Abstract
Background Ceratocystis fimbriata is a hazardous fungal pathogen able to cause black rot disease on sweet potato. The management of C. fimbriata strongly relies on the use of toxic fungicides, and there is a lack of efficient alternative strategies. Results The antifungal properties of quinolinic acid (QA) were studied for the first time, indicating that QA shows selective antifungal activity against C. fimbriata. QA inhibited completely the mycelial growth of C. fimbriata at less than 0.8 mg mL-1 concentration (pH 4), and was able to produce alterations in the fungal cell wall, and to impede spore agglutination and mycelium formation. QA significantly reduced the concentration of ergosterol, and was able to associate to iron (II), suggesting that QA may be a lanosterol 14-α demethylase inhibitor. In preventive applications, QA reduced the disease incidence of C. fimbriata on sweet potato by 75%, achieving higher control efficacy in comparison with commercial fungicides prochloraz and carbendazim. Conclusions The first selective antifungal agent against C. fimbriata was discovered in this work, and showed suitable antifungal properties for the management of black rot disease. © 2021 Society of Chemical Industry.
- Published
- 2021
25. Identification of New Fusarium sulawense Strains Causing Soybean Pod Blight in China and Their Control Using Carbendazim, Dipicolinic Acid and Kojic Acid
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Qing Sun, Shi-Ling Zhang, Yong-Jing Xie, Mei-Ting Xu, Daniela D. Herrera-Balandrano, Xin Chen, Su-Yan Wang, Xin-Chi Shi, and Pedro Laborda
- Subjects
Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Fusarium species ,soybean diseases ,carbendazim ,antifungal activity ,causal agent ,mycotoxins - Abstract
Soybean plants are highly susceptible to Fusarium species, which significantly reduce soybean production and quality. Several Fusarium species have been reported to synthesize mycotoxins, such as trichothecene, which have been related to major human diseases. In November 2021, soybean pods in Nantong municipality, China, showed black necrotic lesions during the harvest stage. The disease incidence reached 69%. The pathogen was identified as Fusarium sulawense via morphological analysis and sequencing of ITS, EF1-α and RPB2 genes. A PCR assay with primers targeting the trichothecene biosynthesis genes suggested that the three isolates could synthesize trichothecenes. The effectiveness of fungicide carbendazim and natural metabolites dipicolinic acid and kojic acid was screened for the management of F. sulawense on postharvest soybean pods. The highest efficacy was obtained when combining 3.8 mg/mL carbendazim and 0.84 mg/mL dipicolinic acid (curative efficacy: 49.1% lesion length inhibition; preventive efficacy: 82.7% lesion length inhibition), or 1.9 mg/mL carbendazim and 0.71 mg/mL kojic acid (preventive efficacy: 84.9% lesion length inhibition). Collectively, this report will lead to a better understanding of the safety hazards found in soybean products in China and reveals the application of dipicolinic and kojic acids to reduce the use of carbendazim.
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- 2022
- Full Text
- View/download PDF
26. Identification of New
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Qing, Sun, Shi-Ling, Zhang, Yong-Jing, Xie, Mei-Ting, Xu, Daniela D, Herrera-Balandrano, Xin, Chen, Su-Yan, Wang, Xin-Chi, Shi, and Pedro, Laborda
- Subjects
Fusarium ,Pyrones ,Humans ,Benzimidazoles ,Carbamates ,Soybeans ,Picolinic Acids ,Triticum - Abstract
Soybean plants are highly susceptible to
- Published
- 2022
27. Occurrence of aflatoxins in water and decontamination strategies: A review
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Su-Yan Wang, Daniela D. Herrera-Balandrano, Xin-Chi Shi, Xin Chen, Feng-Quan Liu, and Pedro Laborda
- Subjects
Environmental Engineering ,Ecological Modeling ,Pollution ,Waste Management and Disposal ,Water Science and Technology ,Civil and Structural Engineering - Published
- 2023
28. First Report of
- Author
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Yongjing, Xie, Qing, Sun, Shiling, Zhang, Xinchi, Shi, Daniela D, Herrera-Balandrano, Suyan, Wang, and Pedro, Laborda
- Abstract
In June 2021, leaf blight symptoms were detected on garlic plants (Allium sativum) in southeastern Jiangsu (Nantong municipality; 120.61° E, 33.25° N) in China. Two-month-old garlic plants exhibited leaf tip die back and light brown lesions in new and old leaves (Figure 1). The symptoms were observed in 40% of the plants in a 60-square-meters commercial field surrounded by rice fields, and were similar to those reported for Botrytis porri, Septoria allii and Stemphylium eturmiunum causing leaf blight on garlic (Dumin et al. 2021; Park et al. 2013; Zhang et al. 2009). Six samples of symptomatic tissue collected in Nantong municipality, approximately 1 cm2 in size, were sterilized in 2% NaOCl for 15 min and washed twice with sterile ddH2O. The pathogen was isolated from all collected samples on PDA medium, containing 50 µg/mL chloramphenicol, at 26°C. Pink colonies with orange pigmentation were observed after 7 days. Internal transcribed spacer (ITS), elongation factor 1-α (EF1-α), RNA polymerase II largest subunit (RPB1) and RNA polymerase II second largest subunit (RPB2) genes were amplified using ITS1/ITS4, EF1-728F/EF1-986R, RPB1-R8/RPB1-F5 and fRPB2-7CF/fRPB2-11aR primers, respectively. A total of 17 isolates were obtained, with nine of the isolates sharing the same sequences (strain NJC21), six of the isolates sharing the same sequences (strain NJC22), and the other two isolates showing different sequences (strains NJC23 and NJC24). The obtained sequences were submitted in GenBank under accession numbers OL655398-OL655401 (ITS), and OL741712-OL741723 (EF1-α, RPB1, RPB2). The obtained ITS sequences shared99% homology to the ITS gene from F. acuminatum IBE000006 (EF531232), the EF1-α sequences shared 99% homology to the EF1-α gene from F. acuminatum F1514 (LC469785), the RPB1 sequences shared99% homology to the RPB1 gene from F. acuminatum JW 289003 (MZ921675), and the RPB2 sequences shared 100% homology to the RPB2 gene from F. acuminatum NL19-077002 (MZ921813) or 100% homology to the RPB2 gene from F. acuminatum MD1 (MW164629). A phylogenetic tree was constructed using MEGA7 with related Fusarium strains (Figure 2). Microscope observations after incubation in potato-sucrose-agar (PSA) medium showed the presence of oval microconidia, fusiform macroconidia, septate mycelium and chlamydospores, and agree with the morphology of F. acuminatum (Marek et al. 2013). The pathogenicity was screened with two-week-old wounded and non-wounded garlic plants using a 1 × 106 spores/mL solution (20 µL). Sterile ddH2O was used in the control experiment. The inoculated plants were incubated at 26°C and 60% relative humidity for 3 days, detecting similar lesions compared to those observed in the field. The pathogen was recovered from 5 different lesions, from different plants, and its identity was confirmed by sequence analysis. Recently, F. acuminatum was reported to cause garlic bulb rot in Serbia (Ignjatov et al. 2017). Although F. acuminatum is well known as a causal agent of root rot (Li et al. 2021; Tang et al. 2021), F. acuminatum has also been found causing leaf blight on onion (Parkunan et al. 2013) and muskmelon (Yu et al. 2021). This is the first report of F. acuminatum causing leaf blight on garlic, demonstrating the host and tissue promiscuity of this pathogen. China is the largest producer of garlic in the world with nearly 20 million tons harvested in 2020. This report will help to better understand the pathogens that are affecting garlic production in China.
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- 2022
29. Biocontrol Ability of the
- Author
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Su-Yan, Wang, Daniela D, Herrera-Balandrano, Yan-Xia, Wang, Xin-Chi, Shi, Xin, Chen, Yan, Jin, Feng-Quan, Liu, and Pedro, Laborda
- Subjects
Antifungal Agents ,Mycoses ,Bacillus amyloliquefaciens ,Humans ,Bacillus ,Plant Diseases - Abstract
The
- Published
- 2022
30. Antibacterial mechanism of <scp>Biochanin A</scp> and its efficacy for the control of Xanthomonas axonopodis <scp>pv.</scp> glycines in soybean
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Kai-Xuan Hu, Pablo Laborda, Xin-Chi Shi, Guichun Wu, Su-Yan Wang, Fengquan Liu, Dong Xu, and Pedro Laborda
- Subjects
0106 biological sciences ,Xanthomonas ,Glycine ,Genistein ,01 natural sciences ,Biochanin A ,chemistry.chemical_compound ,Rutin ,Minimum inhibitory concentration ,Isoflavonoid ,Food science ,Pathogen ,Plant Diseases ,Biofilm ,food and beverages ,General Medicine ,Anti-Bacterial Agents ,010602 entomology ,chemistry ,Insect Science ,Xanthomonas axonopodis ,Soybeans ,Antibacterial activity ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
BACKGROUND Xanthomonas axonopodis pv. glycines (Xag) is a hazardous pathogen able to cause bacterial pustule disease in soybean, reducing crop yield and quality. Although flavonoids rutin and genistein are known to play an important role in soybean defence, soybean is only able to produce Biochanin A in low concentration. RESULTS In this work, Biochanin A was found to produce higher antibacterial activity against Xag in comparison with genistein (minimum inhibitory concentration
- Published
- 2020
31. Exogenous Melatonin Enhances Rice Plant Resistance Against Xanthomonas oryzae pv. oryzae
- Author
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Fengquan Liu, Pedro Laborda, and Xian Chen
- Subjects
0106 biological sciences ,0301 basic medicine ,biology ,food and beverages ,Plant Science ,biology.organism_classification ,Nitrate reductase ,01 natural sciences ,Nitric oxide ,Microbiology ,Melatonin ,Nitric oxide synthase ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Xanthomonas oryzae ,chemistry ,Xanthomonas oryzae pv. oryzae ,biology.protein ,medicine ,Agronomy and Crop Science ,Salicylic acid ,010606 plant biology & botany ,Peroxidase ,medicine.drug - Abstract
Rice bacterial blight (BB), caused by Xanthomonas oryzae pv. oryzae, is one of the most serious diseases of rice. In this study we found that exogenous melatonin can increase rice resistance to BB. Treatment of rice plants with exogenous melatonin (20 µg/ml) increased nitrate reductase, nitric oxide synthase, and peroxidase activity, enabling high intracellular concentrations of melatonin, nitric oxide, and H2O2. The expression of NPR1, a key regulator in the salicylic acid signaling pathway, was upregulated more than 10-fold when the plants were challenged with melatonin. Similarly, the messenger RNA level of PDF1.2, a jasmonic acid–induced defense marker, was 15 times higher in the treated plants than in the control plants. Moreover, three pathogenesis-related proteins, PR1b, PR8a, and PR9, were upregulated 20-fold in the presence of melatonin. The application of melatonin (100 µg/ml) to soil-grown rice reduced the incidence of BB by 86.21%. Taken together, these results not only provide a better understanding of melatonin-mediated innate immunity to X. oryzae pv. oryzae in rice but also represent a promising cultivation strategy to protect rice against X. oryzae pv. oryzae infection.
- Published
- 2020
32. Lysobacter gummosus OH17 induces systemic resistance in Oryza sativa ‘Nipponbare’
- Author
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Xian Chen, Jun Ling, Su-Yan Wang, Fengquan Liu, Guichun Wu, Xiao-Feng Lu, Kaihuai Li, and Pedro Laborda
- Subjects
0106 biological sciences ,0301 basic medicine ,Oryza sativa ,biology ,Jasmonic acid ,fungi ,food and beverages ,Plant Science ,Horticulture ,Plant disease resistance ,biology.organism_classification ,01 natural sciences ,Japonica ,Rhizoctonia solani ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Xanthomonas oryzae ,chemistry ,Botany ,Genetics ,Blight ,Agronomy and Crop Science ,Gene ,010606 plant biology & botany - Abstract
Although rice is one of the most cultivated, consumed, and essential crops worldwide, it is highly susceptible to a wide range of bacterial and fungal pathogens that significantly reduce the production and quality of rice. Recently, our research group reported that the plant growth‐promoting rhizobacterium Lysobacter gummosus OH17 was able to enhance the ethylene levels in Oryza sativa ‘Nipponbare’ plants at the late interaction stages. In this work, L. gummosus OH17 was found to be capable of inducing the overexpression of relevant genes of the jasmonic acid and ethylene transduction pathways in Nipponbare plants, such as OsACC, OsACO, OsERF3, and OsLOX, which resulted in the up‐regulation of a number of pathogenesis‐related proteins. The observed metabolic effects enhanced the disease resistance of rice against the three most devastating rice pathogens: Magnaporthe oryzae causing rice blast, Rhizoctonia solani causing rice sheath blight, and Xanthomonas oryzae pv. oryzae causing bacterial leaf blight. Furthermore, it was shown that L. gummosus OH17 also enhanced ethylene production levels in other O. sativa varieties from both the japonica and indica subspecies. Here, we report for the first time the metabolic alterations produced by plant growth‐promoting rhizobacterium L. gummosus OH17 at the late interaction stages and how these alterations induce systemic resistance.
- Published
- 2020
33. An Enzymatic N‐Acylation Step Enables the Biocatalytic Synthesis of Unnatural Sialosides
- Author
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Pedro Laborda, Yong‐Mei Lyu, Fabio Parmeggiani, Ai‐Min Lu, Wen‐Jiao Wang, Ying‐Ying Huang, Kun Huang, Juan Guo, Li Liu, Sabine L. Flitsch, and Josef Voglmeir
- Subjects
010405 organic chemistry ,General Medicine ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences - Published
- 2020
34. Non-Aflatoxigenic Kojic Acid-Producing Aspergillus Flavus NJC04 Reduces the Symptoms of Sclerotinia Sclerotiorum in Soybean
- Author
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Gui-Yang Zhu, Xin-Chi Shi, Daniela D. Herrera-Balandrano, Su-Yan Wang, and Pedro Laborda
- Subjects
History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
35. Kojic acid induces resistance against Colletotrichum brevisporum and enhances antioxidant properties of postharvest papaya
- Author
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Yan-Xia Wang, Su-Yan Wang, Trust Beta, Mahdi Shahriar, Pedro Laborda, and Daniela D. Herrera-Balandrano
- Subjects
Food Science ,Biotechnology - Published
- 2023
36. Effect of exogenous melatonin on the isoflavone content and antioxidant properties of soybean sprouts
- Author
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Si-Qi Wu, Yan-Xia Wang, Trust Beta, Su-Yan Wang, Gerardo Mendez-Zamora, Pedro Laborda, and Daniela D. Herrera-Balandrano
- Subjects
Food Science - Published
- 2023
37. First Report of
- Author
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Tangmin, Chen, Yongjing, Xie, Qing, Sun, Xinchi, Shi, Suyan, Wang, and Pedro, Laborda
- Abstract
In November 2020, leaf sheath on maize (
- Published
- 2021
38. Antifungal Metabolite p-Aminobenzoic Acid (pABA): Mechanism of Action and Efficacy for the Biocontrol of Pear Bitter Rot Disease
- Author
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Fengquan Liu, Feng He, Pedro Laborda, Jun Ling, Bao Tang, Yangyang Zhao, and Chaohui Li
- Subjects
0106 biological sciences ,Metabolite ,Biological pest control ,Lysobacter ,01 natural sciences ,Microbiology ,Pyrus ,chemistry.chemical_compound ,Colletotrichum ,medicine ,Mode of action ,Pathogen ,Plant Diseases ,PEAR ,biology ,Inoculation ,010401 analytical chemistry ,food and beverages ,General Chemistry ,biology.organism_classification ,Fungicides, Industrial ,0104 chemical sciences ,chemistry ,Mechanism of action ,Fruit ,medicine.symptom ,General Agricultural and Biological Sciences ,4-Aminobenzoic Acid ,010606 plant biology & botany - Abstract
Colletotrichum fructicola, a fungal pathogen that causes bitter rot disease in pears, has recently emerged in Eastern Asia and caused enormous economic losses and crop penalties. For this reason, new strategies for the management of bitter rot disease are greatly needed and can have a great impact on the field. In this regard, our research group recently reported that p-aminobenzoic acid (pABA), which was found in the secretions of rhizobacterium Lysobacter antibioticus OH13, showed a broad spectrum of antifungal activities. Following this project, the antifungal mode of action of pABA has been elucidated in this work indicating that pABA affects the fungal cell cycle of C. fructicola by inhibiting septation during cell division. pABA stability and diffusion screening revealed that pABA degrades after 15 days and is able to cross the pear skin into the external parts of the mesocarp. In vivo studies demonstrated that pABA shows high curative ability against the infection of C. fructicola in pears. To show the efficacy of OH13 for the biocontrol of bitter rot disease, cultures of OH13 containing 379.4 mg/L pABA were sprayed on inoculated pears, significantly reducing the symptoms of the pathogen.
- Published
- 2019
39. Improving the production of a novel antifungal alteramide B in Lysobacter enzymogenes OH11 by strengthening metabolic flux and precursor supply
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Cheng Sun, Bao Tang, Yancun Zhao, Fengquan Liu, Pedro Laborda, and Xu Gaoge
- Subjects
0106 biological sciences ,Antifungal ,Antifungal Agents ,Environmental Engineering ,medicine.drug_class ,Lactams, Macrocyclic ,Bioengineering ,010501 environmental sciences ,01 natural sciences ,Tryptic soy broth ,chemistry.chemical_compound ,Biosynthesis ,010608 biotechnology ,Lysobacter enzymogenes ,medicine ,Food science ,Waste Management and Disposal ,0105 earth and related environmental sciences ,Strain (chemistry) ,Renewable Energy, Sustainability and the Environment ,Chemistry ,General Medicine ,Biopesticide ,Lysobacter ,Active compound ,Flux (metabolism) - Abstract
Lysobacter enzymogenes OH11 is currently considered to be a novel biocontrol agent for various plant fungi diseases. At present, only heat-stable antifungal factor (HSAF) has been isolated and identified in culture, although other active compounds also showed antifungal activity. In the present study, a novel active compound, alteramide B (ATB), which exhibits broad-spectrum antagonistic activity against phytopathogenic fungi and oomycetes, was isolated. The genes responsible for ATB biosynthesis were also determined. In addition, a strain producing ATB with minimal HSAF production was successfully generated by redirecting metabolic flux, namely L. enzymogenes OH57. Furthermore, ATB production increased to 893.32 ± 15.57 mg/L through medium optimization and precursor supply strategy, which was 24.36-fold higher than that of 10% tryptic soy broth (36.67 ± 1.63 mg/L). Taken together, this study indicates ATB has great development value as a biopesticide because of its bioactivity and high production.
- Published
- 2019
40. Biocontrol of Colletotrichum brevisporum in soybean using a new genistein-producing Paecilomyces strain
- Author
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Yun-Jiao Zhang, Daniela D. Herrera-Balandrano, Xin-Chi Shi, Su-Yan Wang, and Pedro Laborda
- Subjects
Insect Science ,Agronomy and Crop Science - Published
- 2022
41. Evaluation of chitosan coatings enriched with turmeric and green tea extracts on postharvest preservation of strawberries
- Author
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Chun Yang, Jia-Hao Lu, Mei-Ting Xu, Xin-Chi Shi, Zhi-Wei Song, Tang-Min Chen, Daniela D. Herrera-Balandrano, Yun-Jiao Zhang, Pedro Laborda, Mahdi Shahriar, and Su-Yan Wang
- Subjects
Food Science - Published
- 2022
42. First Report of
- Author
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Tangmin, Chen, Xinchi, Shi, Suyan, Wang, and Pedro, Laborda
- Abstract
In September 2020, widespread stem canker on soybean (
- Published
- 2020
43. Chromatographic Methods for Detection and Quantification of Carbendazim in Food
- Author
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Xin-Chi Shi, Fengquan Liu, Pedro Laborda, and Su-Yan Wang
- Subjects
0106 biological sciences ,Meat ,Food Contamination ,01 natural sciences ,Micellar electrokinetic chromatography ,chemistry.chemical_compound ,Vegetables ,Animals ,Humans ,Detection limit ,Residue (complex analysis) ,Chromatography ,Pesticide residue ,Carbendazim ,010401 analytical chemistry ,Extraction (chemistry) ,Pesticide Residues ,General Chemistry ,Thin-layer chromatography ,0104 chemical sciences ,Fungicides, Industrial ,chemistry ,Fruit ,Supercritical fluid chromatography ,Benzimidazoles ,Carbamates ,General Agricultural and Biological Sciences ,010606 plant biology & botany ,Chromatography, Liquid - Abstract
Carbendazim (CBZ), which is a fungicide widely used for the management of plant diseases, has been detected in a number of food products. The negative effects of CBZ to human health have stimulated the reduction of the maximum residue limits (MRLs), and subsequently the development of reliable and sensitive detection methods. Here, we are reviewing for the first time all reported chromatographic methods for the detection and quantification of CBZ in food. Several techniques, including liquid chromatography (LC), thin layer chromatography (TLC), micellar electrokinetic chromatography (MEKC), and supercritical fluid chromatography (SFC), were used for the separation and detection of CBZ, showing diverse characteristics and sensitivity. Some methods allowed the specific determination of CBZ, whereas other methods were successfully applied for the simultaneous quantification of a huge number of pesticides. Most reported methods showed limits of detection (LOD) and quantification (LOQ) lower than the MRLs. Relevant efforts in the field have been directed toward the simplification and optimization of the extraction steps prior to the chromatographic separation to increase the recovery and reduce the matrix effects. In this Review, the matrices, extraction procedures, and separation and detection parameters are detailed and compared in order to provide new insights on the development of new reliable methods for the detection of CBZ in food.
- Published
- 2020
44. First Report of
- Author
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Xinchi, Shi, Suyan, Wang, Xuchu, Duan, Xing, Gao, Xinyu, Zhu, and Pedro, Laborda
- Abstract
In March 2020, widespread anthracnose was observed on soybean (Glycine max) in southeastern Jiangsu (Nantong municipality; 120.53° E, 31.58° N) in China. Plants exhibited irregular brown necrotic lesions in stem and leaves, and pronounced wilting. The symptoms were detected in one soybean field, 0.42 ha, surrounded by healthy wheat fields. Approximately 65% of the soybean plants showed the disease symptoms, and crop yield was reduced by 28-35% with respect the yield achieved in previous years, when no symptoms were observed. The symptoms were consistent with those previously reported for anthracnose on soybean caused by Colletotrichum chlorophyti, C. cliviae and C. gloeosporioides (Barbieri et al. 2017; Mahmodi et al. 2013; Yang et al. 2012). Diseased, 3-week old plants were collected. Small pieces, approximately 1 cm2 in size, of symptomatic tissue were surface sterilized in 1.5% NaOCl for 1 min, and washed twice with sterile ddH2O. The pathogen was isolated and cultured on potato dextrose agar (Song et al. 2020), containing chloramphenicol (50 µg/mL), under darkness at 28 °C for 3 days. Sequence of internal transcribed spacer (ITS), actin (ACT), β-tubulin (TUB2) and glyceraldehyde 3-phosphate dehydrogenase (GAP/spanDH) genes was performed as reported by Yang et al. (2015). Sequences were submitted to GenBank under accession numbers MT361074 (ITS) and MT415548-MT415550 (ACT, TUB2 and GAPDH). Blast search revealed that the amplified sequences had 100% (ITS; C. brevisporum TCHD, MH883805), 97.66% (ACT; C. brevisporum S38, KY986905), 99.06% (TUB2; C. brevisporum PF-2, KY705061) and 100% (GAPDH; C. brevisporum LJTJ27, KP823797) matches to multiple C. brevisporum strains, whereas all reported C. chlorophyti, C. cliviae and C. gloeosporioides strains showed no similarity to at least 2 of the studied genes. Molecular phylogenetic tree constructed using MEGA7 confirmed the identity of the pathogen. ACT and ITS sequences were blasted separately in Muscle (https://www.ebi.ac.uk/Tools/msa/muscle/) and then combined together to make the phylogenetic tree. The evolutionary history was inferred by using the Maximum Likelihood method based on the Tamura 3-parameter model, and the tree with the highest log likelihood (-1749.2186) is shown in Figure 1. The Colletotrichum strains previously found causing anthracnoseon soybean, and other relevant strains used in taxonomic analyses were included in the phylogenetic tree. Microscope observations showed the presence of 15-µm-long cylindrical conidia and septate mycelium, and agree with those reported for the morphology of C. brevisporum by Damm et al. (2019). To confirm pathogenicity, the mycelia from a 2 day-old culture on PDA was collected and suspended in sterile ddH2O (≈ 106 cells/mL) to prepare the inoculum. The pathogen was sprayed-inoculated on stem and leaves of healthy soybean plants. In control plants, sterile ddH2O was used. Inoculated plants were maintained in growth chamber at 28 °C and 50% relative humidity. Typical anthracnose symptoms were obsered 20 days after inoculation (Figure 2). C. brevisporum was reported to produce anthracnose on pumpkin, papaya, mulberry, coffee, passion fruit and pepper in China (Liu et al. 2017; Liu et al. 2019; Xue et al. 2019). Here, we report for the first time C. brevisporum causing anthracnose on soybean, an economically-relevant crop in China.
- Published
- 2020
45. Exogenous Melatonin Enhances Rice Plant Resistance Against
- Author
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Xian, Chen, Pedro, Laborda, and Fengquan, Liu
- Subjects
Xanthomonas ,Oryza ,Hydrogen Peroxide ,Melatonin ,Plant Diseases - Abstract
Rice bacterial blight (BB), caused by
- Published
- 2020
46. An Enzymatic N-Acylation Step Enables the Biocatalytic Synthesis of Unnatural Sialosides
- Author
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Juan Guo, Li Liu, Pedro Laborda, Kun Huang, Wen‐Jiao Wang, Josef Voglmeir, Ying‐Ying Huang, Fabio Parmeggiani, Yong-Mei Lyu, Ai-Min Lu, and Sabine L. Flitsch
- Subjects
Glycosylation ,glycosylation ,Acylation ,Carboxylic Acids ,Molecular Conformation ,Stereoisomerism ,Chitin ,010402 general chemistry ,01 natural sciences ,Catalysis ,Sugar acids ,Amidohydrolases ,chemistry.chemical_compound ,Glucosamine ,Manchester Institute of Biotechnology ,Glycosides ,chemistry.chemical_classification ,010405 organic chemistry ,fungi ,Sugar Acids ,General Chemistry ,ResearchInstitutes_Networks_Beacons/manchester_institute_of_biotechnology ,Combinatorial chemistry ,Amides ,0104 chemical sciences ,enzymatic synthesis ,Enzyme ,chemistry ,Biocatalysis ,chitin de-N-acetylases ,unnatural sialosides - Abstract
Reversible and chemoselective: Chitin is one of the most abundant and cheaply available biopolymers in Nature. Chitin has become a valuable starting material for many biotechnological products through manipulation of its N ‐acetyl functionality, which can be cleaved under mild conditions using the enzyme family of de‐ N ‐acetylases. However, the chemo‐selective enzymatic re‐acylation of glucosamine derivatives, which can introduce new stable functionalities into chitin derivatives, is much less explored. Here we describe an acylase (CmCDA from Cyclobacterium marinum ) that catalyzes the N ‐acylation of glycosamine with a range of carboxylic acids under physiological reaction conditions. This biocatalyst closes an important gap in allowing for the conversion of chitin to complex glycosides, such as C5‐modified sialosides, through the use of highly selective enzyme cascades.
- Published
- 2020
47. Melatonin treatments reduce the pathogenicity and inhibit the growth of Xanthomonas oryzae pv. oryzicola
- Author
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Y. Zhao, Y. He, Fengquan Liu, C. Sun, Pedro Laborda, C. Li, and Xian Chen
- Subjects
0106 biological sciences ,0301 basic medicine ,Plant Science ,Horticulture ,Biology ,Pathogenicity ,biology.organism_classification ,01 natural sciences ,Microbiology ,Melatonin ,03 medical and health sciences ,030104 developmental biology ,Xanthomonas oryzae ,Genetics ,medicine ,Agronomy and Crop Science ,010606 plant biology & botany ,medicine.drug - Published
- 2018
48. First Report of Epicoccum sorghinum Causing Leaf Sheath and Leaf Spot on Maize in China
- Author
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Pedro Laborda, Xin-Chi Shi, Yongjing Xie, Qing Sun, Su-Yan Wang, and Tangmin Chen
- Subjects
0106 biological sciences ,0301 basic medicine ,biology ,Inoculation ,Brassica ,food and beverages ,Plant Science ,030108 mycology & parasitology ,biology.organism_classification ,01 natural sciences ,Spore ,Conidium ,Crop ,03 medical and health sciences ,Horticulture ,Curvularia ,Leaf spot ,Pycnidium ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
In November 2020, leaf sheath on maize (Zea mays) was detected in southeastern Jiangsu (Nantong municipality; 120.54° E, 31.58° N) in China. Physiologically mature plants, 13 weeks of cultivation (at the harvest stage), exhibited red-brown lesions in stem and leaves, and dried-up stem (Figure 1). The symptoms were observed on approximately 95% of the maize plants in a 0.8 ha maize field surrounded by old sorghum fields and the crop yield was decreased by 70-85% with respect previous years, when no disease symptoms were detected. Small pieces, approximately 0.3 cm2 in size, of symptomatic tissue were surface sterilized in 1.5% NaOCl for 1 min, and washed twice with sterile ddH2O. The pathogen was isolated (one isolate was obtained) and cultured on PDA medium, containing chloramphenicol (50 µg/mL), under darkness at 26 oC for 3 days. Amplification of internal transcribed spacer (ITS), large subunit (LSU), actin (ACT) and β-tubulin (TUB2) genes was performed using ITS1/ITS4, LR0R/LR7, ACT512F/ACT783R and T1/Bt2b primers, respectively (Ma et al. 2021). Sequences were submitted to GenBank under accession numbers MW800180 (ITS), MW800361 (LSU), MW845677 (ACT) and MW892439 (TUB2). Blast search revealed that the ITS sequence had 100% (492/492 bp) homology with E. sorghinum LY-D-1-1, MT604999, LSU had 98% (1075/1091 bp) homology with E. sorghinum GZDS2018BXT010, MK516207, ACT had 96% (214/222 bp) homology with E. sorghinum M3, MK044832, and TUB2 had 99% (498/499 bp) homology with E. sorghinum BJ-F1, MF987525. Molecular phylogenetic tree was constructed using MEGA7 to confirm the identity of the pathogen. The evolutionary history was inferred by using the Maximum Likelihood method based on the Tamura 3-parameter model, and the tree with the highest likelihood (-1774.9882) is shown in Figure 2. Bipolaris, Curvularia and Fusarium spp. found causing leaf spot on maize were included in the phylogenetic tree (Liu et al. 2021; Reyes Gaige et al. 2020; Chang et al. 2016). To confirm pathogenicity, a sterilized spatula was used to make wounds (3 mm diameter, 1 mm depth) on the stem and leaves of 2-week old maize plants. A solution containing 1 × 108 spores/mL (20 µL) was injected in the wound, whereas sterilized ddH2O was used in the control experiment. Inoculated plants were maintained in a growth chamber at 28 °C and 60% relative humidity for 3 days, observing fast-growing necrotic lesions in both stem and leaves. The pathogen was recovered from the infected plants and its identity was confirmed by morphological and sequence analyses. Microscope observations indicated the presence of chlamydospores, oval conidia (3 × 5 µm) and round pycnidia (60-100 µm diameter), and agree with those previously reported for the morphology of E. sorghinum (Bao et al. 2019). During last 2 years, E. sorghinum was reported to cause leaf spot on a number of relevant agricultural crops in China, including taro, Brassica parachinensis, tea, rice and wheat (Du et al. 2020; Li et al. 2020; Liu et al. 2020a, 2020b), confirming the expansion and host promiscuity of this pathogen. The pathogen was also reported to cause leaf spot on maize in Brazil in 2004 (Do Amaral et al. 2004); however, this is the first report of E. sorghinum causing leaf sheath and leaf spot on maize in China. Maize an important agricultural crop in China with more than 168 million tons produced in 2019. The observed yield loss and disease incidence of the isolated strain suggest that E. sorghinum may be a threat to maize production in China.
- Published
- 2021
49. Application of melatonin for the control of food-borne Bacillus species in cherry tomatoes
- Author
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Yi-Dong Zhou, Xin-Chi Shi, Xin-Xiao Zhu, Mahdi Shahriar, Peng-Fei Sha, Su-Yan Wang, Gui-Yang Zhu, and Pedro Laborda
- Subjects
Food poisoning ,biology ,Biofilm ,Bacillus ,Oxidative phosphorylation ,Horticulture ,medicine.disease ,biology.organism_classification ,Melatonin ,Cereus ,medicine ,Postharvest ,Food science ,Agronomy and Crop Science ,hormones, hormone substitutes, and hormone antagonists ,Bacteria ,Food Science ,medicine.drug - Abstract
Food-borne Bacillus species are often associated with postharvest fruit and vegetables, and are a common cause of food poisoning. In this work, melatonin was found to inhibit the growth of food-borne Bacillus species, including B. cereus, B. licheniformis and B. subtilis, on cherry tomatoes. This result was attributed to two complementary effects. On one side, melatonin showed antibacterial activity to B. subtilis, inhibiting cell division and oxidative phosphorylation, and reducing swimming motility and biofilm formation. On the other side, melatonin enhanced the antioxidant capacity of cherry tomatoes, and induced the biosynthesis of phenolics and ethylene, and the overexpression of pathogenesis-related genes PT16 and PR1b1. The defence response was only observed in the presence of both B. subtilis and melatonin, but not in the single treatments. Although melatonin was known to induce disease resistance in fruit in the presence of necrotrophic pathogens, this is the first report of melatonin inducing fruit defence after treatment with a non-necrotrophic bacterium. Collectively, the application of melatonin for the control of food-borne Bacillus pathogens was explored for the first time, revealing a new potential application of melatonin in postharvest products.
- Published
- 2021
50. Enhanced spoVF operon increases host attachment and biocontrol ability of Bacillus subtilis for the management of Ceratocystis fimbriata in sweet potato
- Author
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Ting Wang, Xiangchen Wang, Ming-Hui Han, Su-Yan Wang, Pedro Laborda, Xue-Ge Song, Dong-Jing Yang, and Xin-Chi Shi
- Subjects
Metabolic pathway ,biology ,Operon ,Insect Science ,Mutant ,Biofilm ,Ceratocystis fimbriata ,Bacillus subtilis ,biology.organism_classification ,Agronomy and Crop Science ,Pathogen ,Bacteria ,Microbiology - Abstract
Bacillus subtilis is a ubiquitous environmental bacterium commonly used for the biological control of fungal plant diseases. The ability to form surface-attached microbial communities is essential for B. subtilis to colonize and protect plants from pathogen infection. In this work, it was found that enhanced spoVF operon altered the carbon metabolic pathways of B. subtilis 168, accelerating cell growth and glucose consumption, and inducing the production of antifungal metabolite dipicolinic acid (DPA). These metabolic effects significantly increased swimming motility and biofilm formation, enhancing the colonization ability and host attachment of B. subtilis. Mutant B. subtilis showed higher inhibitory activity in vivo against sweet potato pathogen Ceratocystis fimbriata in comparison with the wild-type strain. Collectively, novel insights on the key genes and pathways involved in biofilm formation and attachment of B. subtilis were revealed in this work.
- Published
- 2021
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