931 results on '"Pedro Gonzalez"'
Search Results
2. Transcending frontiers in prostate cancer: the role of oncometabolites on epigenetic regulation, CSCs, and tumor microenvironment to identify new therapeutic strategies
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Giulia Ambrosini, Marco Cordani, Ali Zarrabi, Sergio Alcon-Rodriguez, Rosa M. Sainz, Guillermo Velasco, Pedro Gonzalez-Menendez, and Ilaria Dando
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Prostate cancer ,Oncometabolites ,Epigenetic alterations ,Cancer stem cells (CSCs) ,Metabolic Enzymes ,EMT ,Medicine ,Cytology ,QH573-671 - Abstract
Abstract Prostate cancer, as one of the most prevalent malignancies in males, exhibits an approximate 5-year survival rate of 95% in advanced stages. A myriad of molecular events and mutations, including the accumulation of oncometabolites, underpin the genesis and progression of this cancer type. Despite growing research demonstrating the pivotal role of oncometabolites in supporting various cancers, including prostate cancer, the root causes of their accumulation, especially in the absence of enzymatic mutations, remain elusive. Consequently, identifying a tangible therapeutic target poses a formidable challenge. In this review, we aim to delve deeper into the implications of oncometabolite accumulation in prostate cancer. We center our focus on the consequential epigenetic alterations and impacts on cancer stem cells, with the ultimate goal of outlining novel therapeutic strategies. Graphical Abstract
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- 2024
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3. Castration promotes the browning of the prostate tumor microenvironment
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Alejandro Alvarez-Artime, Belen Garcia-Soler, Pedro Gonzalez-Menendez, Sheila Fernandez-Vega, Rafael Cernuda-Cernuda, David Hevia, Juan C. Mayo, and Rosa M. Sainz
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Prostate cancer ,Browning ,Adipose tissue ,Tumor microenvironment ,UCP1 ,Medicine ,Cytology ,QH573-671 - Abstract
Abstract Background Adipose tissue has gained attention due to its potential paracrine role. Periprostatic adipose tissue surrounds the prostate and the prostatic urethra, and it is an essential player in prostate cancer progression. Since obesity is directly related to human tumor progression, and adipose tissue depots are one of the significant components of the tumor microenvironment, the molecular mediators of the communication between adipocytes and epithelial cells are in the spotlight. Although periprostatic white adipose tissue contributes to prostate cancer progression, brown adipose tissue (BAT), which has beneficial effects in metabolic pathologies, has been scarcely investigated concerning cancer progression. Given that adipose tissue is a target of androgen signaling, the actual role of androgen removal on the periprostatic adipose tissue was the aim of this work. Methods Surgical castration of the transgenic adenocarcinoma of the mouse prostate (TRAMP) was employed. By histology examination and software analysis, WAT and BAT tissue was quantified. 3T3-like adipocytes were used to study the role of Casodex® in modifying adipocyte differentiation and to investigate the function of the secretome of adipocytes on the proliferation of androgen-dependent and independent prostate cancer cells. Finally, the role of cell communication was assayed by TRAMP-C1 xenograft implanted in the presence of 3T3-like adipocytes. Results Androgen removal increases brown/beige adipose tissue in the fat immediately surrounding the prostate glands of TRAMP mice, concomitant with an adjustment of the metabolism. Castration increases body temperature, respiratory exchange rate, and energy expenditure. Also, in vitro, it is described that blocking androgen signaling by Casodex® increases the uncoupling protein 1 (UCP1) marker in 3T3-like adipocytes. Finally, the effect of brown/beige adipocyte secretome was studied on the proliferation of prostate cancer cells in vivo and in vitro. The secretome of brown/beige adipocytes reduces the proliferation of prostate cancer cells mediated partly by the secretion of extracellular vesicles. Conclusions Consequently, we concluded that hampering androgen signaling plays a crucial role in the browning of the periprostatic adipose tissue. Also, the presence of brown adipocytes exhibits the opposite effect to that of white adipocytes in vitro regulating processes that govern the mechanisms of cell proliferation of prostate cancer cells. And finally, promoting the browning of adipose tissue in the periprostatic adipose tissue might be a way to handle prostate cancer cell progression. Video Abstract
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- 2023
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4. Implementing Telemedicine in Clinical Practice in the First Digital Hematology Unit: Feasibility Study
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Amparo Santamaria, Cristina Antón Maldonado, Beatriz Sánchez-Quiñones, Nataly Ibarra Vega, Maikel Ayo González, Pedro Gonzalez Cabezas, and Rafael Carrasco Moreno
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Medicine - Abstract
BackgroundCurrently, there are no telemedicine models that fully integrate all areas of hematology into daily practice. ObjectiveThe objectives of this feasibility study were to assess the practicality of implementing telemedicine into our clinical practice in the first Digital Hematology Unit and propose an innovative integrative design for clinical practice. MethodsWe designed the Digital Hematology Unit, which is a specific physical space dedicated to carrying out telemedicine and monitoring patients in a holistic way. Also, a satisfaction questionnaire was performed and health care indicators were measured. ResultsIn 2021, there were 1331 first visits and 7534 follow-up visits. Of the first visits, 12.2% (n=163) were face-to-face and 87.8% (n=1168) were telematic. For follow-up visits, 29.9% (n=2251) were face-to-face and 70.1% (n=5283) were telematic. The health care management indicators showed that we had a waiting time of less than 4 days and took less than 4 hours to answer interconsultations among specialists. Moreover, patients reported a high level of satisfaction with the services provided. ConclusionsOur Digital Hematology Unit, as a case of success, serves as an example of how innovative digital solutions can contribute to the quality of care and excellence in health care achieved through a digital transformation process led by hematologists.
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- 2023
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5. Convergence and error estimates for pseudo-polyharmonic div-curl and elastic interpolation on a bounded domain
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Mohammed-Najib Benbourhim, Abderrahman Bouhamidi, and Pedro Gonzalez-Casanova
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Approximation theory ,interpolation and approximation ,convergence and error estimates ,numerical analysis ,functional analysis ,Mathematics ,QA1-939 - Abstract
This paper establishes convergence rates and error estimates for the pseudo-polyharmonic div-curl and elastic interpolation. This type of interpolation is based on a combination of the divergence and the curl of a multivariate vector field and minimizing an appropriate functional energy related to the divergence and curl. Convergence rates and error estimates are established when the interpolated vector field is assumed to be in the classical fractional vectorial Sobolev space on an open bounded set with a Lipschitz-continuous boundary. The error estimates introduced in this work are sharp and the rate of convergence depends algebraically on the fill distance of the scattered data nodes. More precisely, the order of convergence depends, essentially, on the smoothness of the target vector field, on the dimension of the Euclidean space and on the null space of corresponding Sobolev semi-norm.
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- 2023
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6. Haplotyping SNPs for allele-specific gene editing of the expanded huntingtin allele using long-read sequencing
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Li Fang, Alex Mas Monteys, Alexandra Dürr, Megan Keiser, Congsheng Cheng, Akhil Harapanahalli, Pedro Gonzalez-Alegre, Beverly L. Davidson, and Kai Wang
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Genetics ,QH426-470 - Published
- 2023
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7. The Importance of Offering Exome or Genome Sequencing in Adult Neuromuscular Clinics
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Laynie Dratch, Tanya M. Bardakjian, Kelsey Johnson, Nareen Babaian, Pedro Gonzalez-Alegre, Lauren Elman, Colin Quinn, Michael H. Guo, Steven S. Scherer, and Defne A. Amado
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neurogenetics ,genetic testing ,genetic counseling ,neuromuscular ,Biology (General) ,QH301-705.5 - Abstract
Advances in gene-specific therapeutics for patients with neuromuscular disorders (NMDs) have brought increased attention to the importance of genetic diagnosis. Genetic testing practices vary among adult neuromuscular clinics, with multi-gene panel testing currently being the most common approach; follow-up testing using broad-based methods, such as exome or genome sequencing, is less consistently offered. Here, we use five case examples to illustrate the unique ability of broad-based testing to improve diagnostic yield, resulting in identification of SORD-neuropathy, HADHB-related disease, ATXN2-ALS, MECP2 related progressive gait decline and spasticity, and DNMT1-related cerebellar ataxia, deafness, narcolepsy, and hereditary sensory neuropathy type 1E. We describe in each case the technological advantages that enabled identification of the causal gene, and the resultant clinical and personal implications for the patient, demonstrating the importance of offering exome or genome sequencing to adults with NMDs.
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- 2024
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8. A Prosumer-Oriented, Interoperable, Modular and Secure Smart Home Energy Management System Architecture
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Pedro Gonzalez-Gil, Juan Antonio Martinez, and Antonio Skarmeta
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energy management systems ,home automation ,smart homes ,Internet of Things ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
As prices on renewable energy electricity generation and storage technologies decrease, previous standard home energy end-users are also becoming producers (prosumers). Together with the increase of Smart Home automation and the need to manage the energy-related interaction between home energy consumers and Smart Grid through different Demand Response approaches, home energy management becomes a complex and multi-faceted problem, calling for an extensible, interoperable and secure solution. This work proposes a modular architecture for building a Smart Home Energy Management System, integrable with existing Home Automation Systems, that considers the use of standard interfaces for data communication, the implementation of security measures for the integration of the different components, as well as the use of semantic web technologies to integrate knowledge and build on it. Our proposal is finally validated through implementation in one real smart home test-bed, evaluating the system from a functional standpoint to demonstrate its ability to support our goals.
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- 2022
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9. Use of non-intrusive laser exfoliation to improve substance uptake into citrus leaves [version 3; peer review: 2 approved]
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Pedro Gonzalez, Teresa Flores Reyes, Luis Ponce Cabrera, and Ed Etxeberria
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Citrus ,foliar sprays ,foliar uptake ,laser light ,eng ,Medicine ,Science - Abstract
Background: Despite the presence of stomata in leaves, foliar application of agrochemicals can be extremely inefficient due to the low permeability of leaf cuticular surfaces to polar compounds. Methods: This study introduced a laser-based “wax exfoliation” method to facilitate the penetration of substances into the leaf and, together with enhancing their uptake into the phloem and subsequent transport across tissue. This investigation demonstrated the effectiveness and non-invasive properties of laser exfoliation to improve the penetration of foliar-applied substances into citrus leaves. Results: This work presents the use of laser energy to exfoliate the cuticle of a leaf, with the highest energy density of 0.76 J/ cm2 resulting in 85-90% exfoliation across the entire laser-spot area. The infrared wavelength of the erbium laser is specifically chosen to target the wax cuticle without causing damage to the underlying epidermal cells. This selective ablation allows for increased penetration of therapeutic compounds into the leaf and transportation throughout the plant's vasculature. This is demonstrated using a fluorescent glucose analog applied to the laser treated leaves, showing increased penetration and transport throughout the leaf. Conclusions: Our findings demonstrate that the use of laser technology for the foliar application of agrochemicals provides significant advantages, including improved foliage uptake of therapeutic compounds. The method of cuticle exfoliation presented in this study is highly effective and non-intrusive, limiting its effects to the cuticle only. Future work should focus on the development of prototypes for in-field applications, including testing at longer distances as the Er:YAG laser does not require a lens for this application.
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- 2023
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10. Use of non-intrusive laser exfoliation to improve substance uptake into citrus leaves [version 2; peer review: 2 approved]
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Pedro Gonzalez, Teresa Flores Reyes, Luis Ponce Cabrera, and Ed Etxeberria
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Citrus ,foliar sprays ,foliar uptake ,laser light ,eng ,Medicine ,Science - Abstract
Background: Despite the presence of stomata in leaves, foliar application of agrochemicals can be extremely inefficient due to the low permeability of leaf cuticular surfaces to polar compounds. Methods: This study introduced a laser-based “wax exfoliation” method to facilitate the penetration of substances into the leaf and, together with enhancing their uptake into the phloem and subsequent transport across tissue. This investigation demonstrated the effectiveness and non-invasive properties of laser exfoliation to improve the penetration of foliar-applied substances into citrus leaves. Results: This work presents the use of laser energy to exfoliate the cuticle of a leaf, with the highest energy density of 0.76 J/ cm2 resulting in 85-90% exfoliation across the entire laser-spot area. The infrared wavelength of the erbium laser is specifically chosen to target the wax cuticle without causing damage to the underlying epidermal cells. This selective ablation allows for increased penetration of therapeutic compounds into the leaf and transportation throughout the plant's vasculature. This is demonstrated using a fluorescent glucose analog applied to the laser treated leaves, showing increased penetration and transport throughout the leaf. Conclusions: Our findings demonstrate that the use of laser technology for the foliar application of agrochemicals provides significant advantages, including improved foliage uptake of therapeutic compounds. The method of cuticle exfoliation presented in this study is highly effective and non-intrusive, limiting its effects to the cuticle only. Future work should focus on the development of prototypes for in-field applications, including testing at longer distances as the Er:YAG laser does not require a lens for this application.
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- 2023
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11. DeepRepeat: direct quantification of short tandem repeats on signal data from nanopore sequencing
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Li Fang, Qian Liu, Alex Mas Monteys, Pedro Gonzalez-Alegre, Beverly L. Davidson, and Kai Wang
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Short tandem repeat ,Nanopore sequencing ,Deep learning ,Telomeric repeat ,Biology (General) ,QH301-705.5 ,Genetics ,QH426-470 - Abstract
Abstract Despite recent improvements in basecalling accuracy, nanopore sequencing still has higher error rates on short-tandem repeats (STRs). Instead of using basecalled reads, we developed DeepRepeat which converts ionic current signals into red-green-blue channels, thus transforming the repeat detection problem into an image recognition problem. DeepRepeat identifies and accurately quantifies telomeric repeats in the CHM13 cell line and achieves higher accuracy in quantifying repeats in long STRs than competing methods. We also evaluate DeepRepeat on genome-wide or candidate region datasets from seven different sources. In summary, DeepRepeat enables accurate quantification of long STRs and complements existing methods relying on basecalled reads.
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- 2022
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12. Silencing of δ‐aminolevulinic acid dehydratase via virus induced gene silencing promotes callose deposition in plant phloem
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Nabil Killiny, Shelley E. Jones, and Pedro Gonzalez-Blanco
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δ‐aminolevulinic acid dehydratase ,callose ,phloem ,citrus ,virus-induced gene silencing ,citrus tristeza virus ,Plant ecology ,QK900-989 ,Biology (General) ,QH301-705.5 - Abstract
The δ-aminolevulinic acid dehydratase (ALAD) enzyme is an intermediate in the biosynthetic pathway of tetrapyrroles. It combines two δ‐aminolevulinic acid (δ‐ALA) molecules to form the pyrrole, porphobilinogen, an important precursor for plant pigments involved in photosynthesis, respiration, light-sensing, and nutrient uptake. Our recent efforts showed that, in citrus, silencing of ALAD gene via Citrus tristeza virus-induced gene silencing, caused yellow spots and necrosis in leaves and in developing new shoots. Silencing of ALAD gene reduced leaf pigments and altered leaf metabolites. Moreover, total phenolic content, H2O2, and reactive oxygen species (ROS) increased, indicating that silencing of ALAD induced severe stress. Herein, we hypothesized that conditions including lower sucrose, elevated ROS, alteration of microRNA involved in RNAi regulatory protein Argonaute 1 (AGO1) and ROS lead to higher deposition of callose in phloem tissues. Using aniline blue staining and gene expression analysis of callose synthases, we showed significant deposition of callose in ALAD-silenced citrus.
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- 2022
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13. Vitamin C deficiency reveals developmental differences between neonatal and adult hematopoiesis
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Ira Phadke, Marie Pouzolles, Alice Machado, Josquin Moraly, Pedro Gonzalez-Menendez, Valérie S. Zimmermann, Sandrina Kinet, Mark Levine, Pierre-Christian Violet, and Naomi Taylor
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vitamin C ,ascorbate ,GULO ,hematopoiesis ,erythropoiesis ,anemia ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Hematopoiesis, a process that results in the differentiation of all blood lineages, is essential throughout life. The production of 1x1012 blood cells per day, including 200x109 erythrocytes, is highly dependent on nutrient consumption. Notably though, the relative requirements for micronutrients during the perinatal period, a critical developmental window for immune cell and erythrocyte differentiation, have not been extensively studied. More specifically, the impact of the vitamin C/ascorbate micronutrient on perinatal as compared to adult hematopoiesis has been difficult to assess in animal models. Even though humans cannot synthesize ascorbate, due to a pseudogenization of the L-gulono-γ-lactone oxidase (GULO) gene, its generation from glucose is an ancestral mammalian trait. Taking advantage of a Gulo-/- mouse model, we show that ascorbic acid deficiency profoundly impacts perinatal hematopoiesis, resulting in a hypocellular bone marrow (BM) with a significant reduction in hematopoietic stem cells, multipotent progenitors, and hematopoietic progenitors. Furthermore, myeloid progenitors exhibited differential sensitivity to vitamin C levels; common myeloid progenitors and megakaryocyte-erythrocyte progenitors were markedly reduced in Gulo-/- pups following vitamin C depletion in the dams, whereas granulocyte-myeloid progenitors were spared, and their frequency was even augmented. Notably, hematopoietic cell subsets were rescued by vitamin C repletion. Consistent with these data, peripheral myeloid cells were maintained in ascorbate-deficient Gulo-/- pups while other lineage-committed hematopoietic cells were decreased. A reduction in B cell numbers was associated with a significantly reduced humoral immune response in ascorbate-depleted Gulo-/- pups but not adult mice. Erythropoiesis was particularly sensitive to vitamin C deprivation during both the perinatal and adult periods, with ascorbate-deficient Gulo-/- pups as well as adult mice exhibiting compensatory splenic differentiation. Furthermore, in the pathological context of hemolytic anemia, vitamin C-deficient adult Gulo-/- mice were not able to sufficiently increase their erythropoietic activity, resulting in a sustained anemia. Thus, vitamin C plays a pivotal role in the maintenance and differentiation of hematopoietic progenitors during the neonatal period and is required throughout life to sustain erythroid differentiation under stress conditions.
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- 2022
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14. Nursing Staff Mortality During the Covid-19 Pandemic, Scoping Review
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Yuliana Vera-Alanis PhD, Daysi Aranda-Sanchez PhD, Guillermo Cano-Verdugo PhD, Pedro Gonzalez-Angulo PhD, Cynthia Berenice Rueda-Sanchez PhD, and Augusto Rojas-Martinez MD, PhD
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Nursing ,RT1-120 - Abstract
Introduction In a pandemic, the risk of infection and mortality for nurses can increase substantially. This study analyzes the information reported on the mortality of nursing personnel from different countries due to COVID-19. Methods We performed a scoping review by searching information available in PubMed, Scielo, and Google Scholar databases using concepts related to nursing, mortality, COVID-19, etc. The studies were searched from September 1 to October 30, 2021. This review included 12 articles were selected among 73 identified for the scope search because they included nurses. Results Nursing personnel presented a high mortality rate after physicians and health personnel. The average age of the deceased nurses was 43 years, being higher in men than in women. Higher mortality rates were reported in services attending COVID-19, nursing homes, and psychiatric centers. Conclusion Contagion and deaths are attributed to lack of planning and inadequate personal protective equipment.
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- 2022
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15. Architecture for Orchestrating Dynamic DNN-Powered Image Processing Tasks in Edge and Cloud Devices
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Pedro Gonzalez-Gil, Alberto Robles-Enciso, Juan Antonio Martinez, and Antonio F. Skarmeta
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DNN image processing ,IoT ,orchestration ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
DNN processing on image streams has opened the possibility for new and innovative applications. Some of those would benefit from performing the computation locally, avoiding incurring into latencies due to data travelling to image processing services in the cloud, and thus allowing for faster response times. New devices like the GPU-accelerated NVIDIA Jetson family, such as the Jetson Nano, are capable of running modern DNN image processing models, offering an affordable, powerful and scalable local alternative to cloud processing. Performing local image processing can also benefit security and even GDPR compliance, potentially easing the deployment of this solutions. Not only that, but local image processing can also bring the possibility of applying these techniques in areas with reduced connectivity, where cloud-based solutions are unfeasible. In this work, we propose an architecture for the orchestration of DNN accelerated image processing on IoT devices, based on FogFlow; an orchestration platform capable of leveraging cloud and edge resources. FogFlow is part of the FIWARE initiative and is based in the NGSI family of standards, widely applied in Smart City, Smart Building and Smart Home solutions, making it an easy-to-integrate technology.
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- 2021
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16. Diffusion–convection impedance for a micro-band electrode under microfluidic conditions
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Claire Poujouly, Pedro Gonzalez-Losada, Rassen Boukraa, Martina Freisa, Jérémy Le Gall, David Bouville, Claude Deslouis, and Jean Gamby
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Channel-electrode ,Microfluidics ,Impedance ,Diffusion–convection ,Reduced frequency ,Industrial electrochemistry ,TP250-261 ,Chemistry ,QD1-999 - Abstract
Diffusion–convection impedance for a micro-band electrode placed in a Poiseuille flow was studied experimentally under microfluidic conditions. Electrochemical impedance spectroscopy (EIS) experiments performed with a fast electrochemical system show perfect agreement with a previously published quantitative analytical expression in the low frequency domain.
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- 2022
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17. Predicting Severity of Huntington's Disease With Wearable Sensors
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Brittany H. Scheid, Stephen Aradi, Robert M. Pierson, Steven Baldassano, Inbar Tivon, Brian Litt, and Pedro Gonzalez-Alegre
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movement disorders ,biosensors ,gait ,accelerometer ,Huntington's disease (HD) ,machine learning ,Medicine ,Public aspects of medicine ,RA1-1270 ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
The Unified Huntington's Disease Rating Scale (UHDRS) is the primary clinical assessment tool for rating motor function in patients with Huntington's disease (HD). However, the UHDRS and similar rating scales (e.g., UPDRS) are both subjective and limited to in-office assessments that must be administered by a trained and experienced rater. An objective, automated method of quantifying disease severity would facilitate superior patient care and could be used to better track severity over time. We conducted the present study to evaluate the feasibility of using wearable sensors, coupled with machine learning algorithms, to rate motor function in patients with HD. Fourteen participants with symptomatic HD and 14 healthy controls participated in the study. Each participant wore five adhesive biometric sensors applied to the trunk and each limb while completing brief walking, sitting, and standing tasks during a single office visit. A two-stage machine learning method was employed to classify participants by HD status and to predict UHDRS motor subscores. Linear discriminant analysis correctly classified all participants' HD status except for one control subject with abnormal gait (96.4% accuracy, 92.9% sensitivity, and 100% specificity in leave-one-out cross-validation). Two regression models accurately predicted individual UHDRS subscores for gait, and dystonia within a 10% margin of error. Our regression models also predicted a composite UHDRS score–a sum of left and right arm rigidity, total chorea, total dystonia, bradykinesia, gait, and tandem gait subscores–with an average error below 15%. Machine learning classifiers trained on brief in-office datasets discriminated between controls and participants with HD, and could accurately predict selected motor UHDRS subscores. Our results could enable the future use of biosensors for objective HD assessment in the clinic or remotely and could inform future studies for the use of this technology as a potential endpoint in clinical trials.
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- 2022
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18. Microfluidic Chip for the Electrochemical Detection of MicroRNAs: Methylene Blue Increasing the Specificity of the Biosensor
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Claire Poujouly, Jérémy Le Gall, Martina Freisa, Djamila Kechkeche, David Bouville, Jihed Khemir, Pedro Gonzalez-Losada, and Jean Gamby
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microfluidics ,miRNA electrochemical detection ,methylene blue (MB) ,microelectrodes ,surface functionalization ,Chemistry ,QD1-999 - Abstract
MicroRNAs (miRNAs) are biomarkers involved in biological processes that are released by cells and found in biological fluids such as blood. The development of nucleic acid-based biosensors has significantly increased in the past 10 years because the detection of such nucleic acids can easily be applied in the field of early diagnosis. These biosensors need to be sensitive, specific, and fast in order to be effective. This work introduces a newly-built electrochemical biosensor that enables a fast detection in 30 min and, as a result of its integration in microfluidics, presents a limit of detection as low as 1 aM. The litterature concerning the specificity of electrochemical biosensors includes several studies that report one base-mismatch, with the base-mismatch located in the middle of the strand. We report an electrochemical nucleic acid biosensor integrated into a microfluidic chip, allowing for a one-base-mismatch specificity independently from the location of the mismatch in the strand. This specificity was improved using a solution of methylene blue, making it possible to discriminate a partial hybridization from a complete and complementary hybridization.
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- 2022
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19. Design and Validation of a Multi-Point Injection Technology for MR-Guided Convection Enhanced Delivery in the Brain
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Kayla Prezelski, Megan Keiser, Joel M. Stein, Timothy H. Lucas, Beverly Davidson, Pedro Gonzalez-Alegre, and Flavia Vitale
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convection enhanced delivery ,gene therapy and therapeutic delivery ,delivery cannula ,microcannula ,intraparenchymal delivery ,Medical technology ,R855-855.5 - Abstract
Convection enhanced delivery (CED) allows direct intracranial administration of neuro-therapeutics. Success of CED relies on specific targeting and broad volume distributions (VD). However, to prevent off-target delivery and tissue damage, CED is typically conducted with small cannulas and at low flow rates, which critically limit the maximum achievable VD. Furthermore, in applications such as gene therapy requiring injections of large fluid volumes into broad subcortical regions, low flow rates translate into long infusion times and multiple surgical trajectories. The cannula design is a major limiting factor in achieving broad VD, while minimizing infusion time and backflow. Here we present and validate a novel multi-point cannula specifically designed to optimize distribution and delivery time in MR-guided intracranial CED of gene-based therapeutics. First, we evaluated the compatibility of our cannula with MRI and common viral vectors for gene therapy. Then, we conducted CED tests in agarose brain phantoms and benchmarked the results against single-needle delivery. 3T MRI in brain phantoms revealed minimal susceptibility-induced artifacts, comparable to the device dimensions. Benchtop CED of adeno-associated virus demonstrated no viral loss or inactivation. CED in agarose brain phantoms at 3, 6, and 9 μL/min showed >3x increase in volume distribution and 60% time reduction compared to single-needle delivery. This study confirms the validity of a multi-point delivery approach for improving infusate distribution at clinically-compatible timescales and supports the feasibility of our novel cannula design for advancing safety and efficacy of MR-guided CED to the central nervous system.
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- 2021
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20. Comparative development and ocular histology between epigean and subterranean salamanders (Eurycea) from central Texas
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Ruben U. Tovar, Valentin Cantu, Brian Fremaux, Pedro Gonzalez Jr, Amanda Spikes, and Dana M. García
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Ocular development ,Divergent evolution ,Evolution and development ,Subterranean salamander ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
The salamander clade Eurycea from the karst regions of central Texas provides an ideal platform for comparing divergent nervous and sensory systems since some species exhibit extreme phenotypes thought to be associated with inhabiting a subterranean environment, including highly reduced eyes, while others retain an ancestral ocular phenotype appropriate for life above ground. We describe ocular morphology, comparing three salamander species representing two phenotypes—the surface-dwelling Barton Springs salamander (E. sosorum) and San Marcos salamander (E. nana) and the obligate subterranean Texas blind salamander (E. rathbuni) - in terms of structure and size of their eyes. Eyes were examined using confocal microscopy and measurements were made using ImageJ. Statistical analysis of data was carried out using R. We also provide a developmental series and track eye development and immunolocalization of Pax6 in E. sosorum and E. rathbuni. Adult histology of the surface-dwelling San Marcos salamander (E. nana) shows similarities to E. sosorum. The eyes of adults of the epigean species E. nana and E. sosorum appear fully developed with all the histological features of a fully functional eye. In contrast, the eyes of E. rathbuni adults have fewer layers, lack lenses and other features associated with vision as has been reported previously. However, in early developmental stages eye morphology did not differ significantly between E. rathbuni and E. sosorum. Parallel development is observed between the two phenotypes in terms of morphology; however, Pax6 labeling seems to decrease in the latter stages of development in E.rathbuni. We test for immunolabeling of the visual pigment proteins opsin and rhodopsin and observe immunolocalization around photoreceptor disks in E. nana and E. sosorum, but not in the subterranean E. rathbuni. Our results from examining developing salamanders suggest a combination of underdevelopment and degeneration contribute to the reduced eyes of adult E. rathbuni.
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- 2021
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21. Evaluation of OFDM Channel Sounding Techniques with Three Modulation Sequences
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Marcelo Molina Silva, Luiz da Silva Mello, Carlos V. Rodríguez Ron, M. P. C. Almeida, Alexander B. Hilario Tacuri, Pedro Gonzalez Castellanos, and L. H. Gonsioroski
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Broadband channel sounding ,channel characterization ,radio propagation ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Abstract This paper presents an evaluation of multicarrier channel sounding techniques using different random and pseudo-random sequences to modulate the OFDM sounding signal. The Random (Rand), Pseudo-Noise (PN) and Zadoff-Chu (ZC) were tested, both in laboratory simulations and in field measurements. For the laboratory simulations Matlab routines were used to generate OFDM signals modulated with each of the three sounding signals, that were then convoluted with a synthesized transfer function of a test channel with six multipath components and added Gaussian noise and Doppler fading. The resulting signals are then correlated with a copy of the original signal to provide the multipath power delay profiles. The root mean square deviation (RMSD) and the relationship between peak power and mean power (PAPR) were used as metrics for the comparison between the test transfer function and the simulation detected multipath delay profiles, showing slight advantages of the ZC sequence. The three sequences were then used in field measurements to characterize an urban channel at 700 MHz. In the field measurements, the ZC sequence showed the lowest detection threshold, allowing for the detection of a larger number of multipath components.
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- 2019
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22. Advances in molecular and cell biology of dystonia: Focus on torsinA
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Pedro Gonzalez-Alegre
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TorsinA ,Dystonia ,DYT1 ,eIF2α ,Endoplasmic reticulum ,Nuclear envelope ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
During the last two decades, our knowledge on the genetic bases of Mendelian forms of dystonia has expanded significantly. This has translated into the generation of multiple cell and animal models to explore the neurobiological bases of this hyperkinetic movement disorder. A majority of these studies have focused on DYT1 dystonia, caused by dominant mutations in the gene encoding for the protein torsinA. Since its discovery, work in multiple laboratories helped identify the subcellular localization of torsinA, key structural features, functionally important physical interactions and biological pathways and physiological events influenced by torsinA. Moreover, recent experimental work indicates potential shared pathogenic pathways between different genetic forms of dystonia. This review will summarize our current knowledge on the molecular and basic biological features of torsinA and its dysfunction when carrying disease-causing mutation, identifying future research priorities and proposing a model of dystonia pathogenesis that might extend beyond DYT1.
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- 2019
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23. Human erythroid differentiation requires VDAC1-mediated mitochondrial clearance
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Martina Moras, Claude Hattab, Pedro Gonzalez-Menendez, Claudio M. Fader, Michael Dussiot, Jerome Larghero, Caroline Le Van Kim, Sandrina Kinet, Naomi Taylor, Sophie D. Lefevre, and Mariano A. Ostuni
- Subjects
Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Erythroblast maturation in mammals is dependent on organelle clearance throughout terminal erythropoiesis. We studied the role of the outer mitochondrial membrane protein voltage-dependent anion channel-1 (VDAC1) in human terminal erythropoiesis. We show that short hairpin (shRNA)-mediated downregulation of VDAC1 accelerates erythroblast maturation. Thereafter, erythroblasts are blocked at the orthochromatic stage, exhibiting a significant decreased level of enucleation, concomitant with an increased cell death. We demonstrate that mitochondria clearance starts at the transition from basophilic to polychromatic erythroblast, and that VDAC1 downregulation induces the mitochondrial retention. In damaged mitochondria from non-erythroid cells, VDAC1 was identified as a target for Parkin-mediated ubiquitination to recruit the phagophore. Here, we showed that VDAC1 is involved in phagophore’s membrane recruitment regulating selective mitophagy of still functional mitochondria from human erythroblasts. These findings demonstrate for the first time a crucial role for VDAC1 in human erythroblast terminal differentiation, regulating mitochondria clearance.
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- 2021
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24. Healthcare delivery via telehealth during the COVID-19 pandemic: The experience of a Huntington’s disease clinic
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Jennifer Klapper, Tanya Bardakjian, Ian Sigal, Kavitha Muralidharan, and Pedro Gonzalez-Alegre
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Neurology. Diseases of the nervous system ,RC346-429 - Published
- 2021
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25. Graphene Oxide and Reduced Derivatives, as Powder or Film Scaffolds, Differentially Promote Dopaminergic Neuron Differentiation and Survival
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Noela Rodriguez-Losada, Rune Wendelbob, M. Carmen Ocaña, Amelia Diaz Casares, Roberto Guzman de Villoría, Jose A. Aguirre Gomez, Miguel A. Arraez, Pedro Gonzalez-Alegre, Miguel A. Medina, Ernest Arenas, and Jose A. Narvaez
- Subjects
Parkinson's disease ,bioenergetic dysfunction ,neurodifferentiation ,neuronal dysfunction ,graphene oxide ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Emerging scaffold structures made of carbon nanomaterials, such as graphene oxide (GO) have shown efficient bioconjugation with common biomolecules. Previous studies described that GO promotes the differentiation of neural stem cells and may be useful for neural regeneration. In this study, we examined the capacity of GO, full reduced (FRGO), and partially reduced (PRGO) powder and film to support survival, proliferation, differentiation, maturation, and bioenergetic function of a dopaminergic (DA) cell line derived from the mouse substantia nigra (SN4741). Our results show that the morphology of the film and the species of graphene (GO, PRGO, or FRGO) influences the behavior and function of these neurons. In general, we found better biocompatibility of the film species than that of the powder. Analysis of cell viability and cytotoxicity showed good cell survival, a lack of cell death in all GO forms and its derivatives, a decreased proliferation, and increased differentiation over time. Neuronal maturation of SN4741 in all GO forms, and its derivatives were assessed by increased protein levels of tyrosine hydroxylase (TH), dopamine transporter (DAT), the glutamate inward rectifying potassium channel 2 (GIRK2), and of synaptic proteins, such as synaptobrevin and synaptophysin. Notably, PRGO-film increased the levels of Tuj1 and the expression of transcription factors specific for midbrain DA neurons, such as Pitx3, Lmx1a, and Lmx1b. Bioenergetics and mitochondrial dysfunction were evaluated by measuring oxygen consumption modified by distinct GO species and were different between powder and film for the same GO species. Our results indicate that PRGO-film was the best GO species at maintaining mitochondrial function compared to control. Finally, different GO forms, and particularly PRGO-film was also found to prevent the loss of DA cells and the decrease of the α-synuclein (α-syn) in a molecular environment where oxidative stress has been induced to model Parkinson's disease. In conclusion, PRGO-film is the most efficient graphene species at promoting DA differentiation and preventing DA cell loss, thus becoming a suitable scaffold to test new drugs or develop constructs for Parkinson's disease cell replacement therapy.
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- 2020
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26. Inpatient gastrostomy in Huntington's disease: Nationwide analysis of utilization and outcomes compared to amyotrophic lateral sclerosis
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Ali G. Hamedani, Meredith Pauly, Dylan P. Thibault, Pedro Gonzalez-Alegre, and Allison W. Willis
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Huntington's disease ,Health services research ,Outcome research ,Gastrostomy ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Background: Huntington's disease (HD) causes dysphagia and dementia, both of which are risk factors for malnutrition. Gastrostomy is used to sustain enteral intake in neurodegenerative diseases and specifically improves outcomes in ALS, but its indications and outcomes in HD are understudied. Objective: To explore the indications and outcomes for gastrostomy for HD. Methods: We performed a retrospective cross-sectional analysis of all HD admissions in the National Inpatient Sample. Logistic regression models compared the patient- and hospital-level characteristics associated with gastrostomy placement in HD and the prevalence of associated diagnoses in HD vs. ALS gastrostomy patients. We also examined in-hospital mortality, length of stay (LOS), and discharge status. Results: Between 2000 and 2010, 5.12% (n = 1614) of HD admissions included gastrostomy tube placement. Gastrostomy patients were more likely to be Black (adjusted odds ratio [AOR] 1.55, 95% CI: 1.09–2.21) and have Medicare coverage (AOR 1.43, 95% CI: 1.0–2.05). The most common comorbidities were aspiration pneumonia (34.1%), dementia (31.3%), malnutrition (30.3%), and dysphagia (29.5%). Dementia and delirium were associated with discharge type but not LOS. Aspiration pneumonia, sepsis, and Elixhauser comorbidity index were associated with LOS but not discharge type. Compared to 7908 ALS gastrostomy patients, those with HD more frequently had aspiration pneumonia (34.1% vs. 20.5%, p
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- 2020
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27. A Novel SPAST/SPG4 Splice-Site Variant in a Family with Dominant Hereditary Spastic Paraplegia
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Nathaniel M. Robbins, Jillian R. Ozmore, Thomas L. Winder, Pedro Gonzalez-Alegre, and Tanya M. Bardakjian
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Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Some causes of spastic paraplegia are treatable and many are not. Diagnostic work-up to determine the etiology can be costly and invasive. Here we report the case of a man with slowly progressive spastic paraparesis. Using a multigene next-generation sequencing (NGS) panel, we identified a novel variant in the consensus splice site of the SPAST gene (exon 13, c.1536G>A, heterozygous), affecting codon 512 of the SPAST mRNA. The observed variant segregated with the disease in four tested family members. In this case, genetic confirmation obviated the need for additional testing such as MRI and lumbar puncture and helped the patient and his family understand his condition and prognosis. We conclude with a brief discussion of the SPG4/SPAST gene and the role of multigene panels in the diagnosis and management of hereditary spastic paraplegia.
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- 2020
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28. Androgen-Dependent Prostate Cancer Cells Reprogram Their Metabolic Signature upon GLUT1 Upregulation by Manganese Superoxide Dismutase
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Isabel Quiros-Gonzalez, Pedro Gonzalez-Menendez, Juan C. Mayo, David Hevia, Francisco Artime-Naveda, Sheila Fernandez-Vega, Mario Fernandez-Fernandez, Pablo Rodriguez-Gonzalez, José I. Garcia-Alonso, and Rosa M. Sainz
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prostate cancer ,metabolism ,redox ,SOD2 ,GLUT-1 ,SDH ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Prostate cancer is the second leading cause of cancer in men across the globe. The prostate gland accounts for some unique glycolytic metabolic characteristics, which causes the metabolic features of prostate tumor initiation and progression to remain poorly characterized. The mitochondrial superoxide dismutase (SOD2) is one of the major redox metabolism regulators. This study points out SOD2 as one major regulator for both redox and glycolytic metabolism in prostate cancer. SOD2 overexpression increases glucose transporter GLUT-1 and glucose uptake. This is not an insulin-mediated effect and seems to be sex-dependent, being present in male mice only. This event concurs with a series of substantial metabolic rearrangements at cytoplasmic and mitochondrial level. A concomitant decrease in glycolytic and pentose phosphate activity, and an increase in electron transfer in the mitochondrial electronic chain, were observed. The Krebs Cycle is altered to produce amino-acid intermediates by decreasing succinate dehydrogenase. This in turn generates a 13-fold increase in the oncometabolite succinate. The protein energy sensor AMPK is decreased at basal and phosphorylated levels in response to glucose deprivation. Finally, preliminary results in prostate cancer patients indicate that glandular areas presenting high levels of SOD2 show a very strong correlation with GLUT-1 protein levels (R2 = 0.287 p-value < 0.0001), indicating that in patients there may exist an analogous phenomenon to those observed in cell culture and mice.
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- 2022
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29. An Integrated Multiple Electrochemical miRNA Sensing System Embedded into a Microfluidic Chip
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Pedro Gonzalez-Losada, Martina Freisa, Claire Poujouly, and Jean Gamby
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microfabrication ,microfluidics ,readout electronics ,electrochemical detection ,cyclic voltammetry ,microRNA ,Biotechnology ,TP248.13-248.65 - Abstract
In this article, we present the design, fabrication and characterization of a microfluidic device and a dedicated electronic system to perform 8 multiplexed electrochemical measurements of synthetic miRNA strands, as well as the biochemical protocols developed for the functionalization of the electrodes and the quantification experiments. The outcomes of this work highlight that the parallelization of eight microchannels containing 2-electrode cells driven by the dedicated electronics offers a solution as robust as a conventional 3-electrode cell and commercially available potentiostats. In addition, this solution presents the advantage of simultaneously reduce the microfabrication complexity, as well as offering an integrated; multiplexed and portable system for the quantification of miRNA. The results presented demonstrate that the system shows a linear response on concentrations down to 10−18 mol/L of perfect matched reporter and capture sequences of synthetic miRNA.
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- 2022
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30. Antioxidant homeostasis is disturbed in fetuses with leptin-resistant genotypes: A cross-sectional study
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Pedro Gonzalez-Añover, Laura Torres-Rovira, Consolacion García-Contreras, Marta Vazquez-Gomez, Jose Luis Pesantez, Maria Victoria Sanz-Fernandez, Susana Astiz, and Antonio Gonzalez-Bulnes
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Animal models ,Fetus ,Leptin ,Oxidative stress ,Pregnancy ,Gynecology and obstetrics ,RG1-991 ,Reproduction ,QH471-489 - Abstract
Background: Leptin resistance is associated with lower reproductive efficiency, with deficiencies in embryo viability and growth leading to low prolificacy and high incidence of intrauterine growth restriction. Objective: We aimed to investigate the underlying mechanisms of the leptin-resistance, evaluating the antioxidant homeostasis of leptin-resistant and lean swine fetuses. Materials and Methods: The study included 70 plasma samples from fetuses at day 62 of gestation (mid-pregnancy), from breeds with (Iberian breed; n=35) and without leptin resistance (25% Large White x 25% Landrace x 50% Pietrain; n=35). The antioxidant status of the plasma samples was determined by photoinduced chemiluminescence whilst systemic oxidative stress was assessed determining plasma hydrogen peroxide concentration by enzimoimmunoassay. Results: Plasma total antioxidant capacity was significantly lower in leptin-resistant fetuses (p=0.003), whilst systemic oxidative stress was increased (p=0.02). Conclusion: Our results indicate key differences in the antioxidant status in pregnancies affected by leptin resistance
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- 2018
31. GLUT1 protects prostate cancer cells from glucose deprivation-induced oxidative stress
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Pedro Gonzalez-Menendez, David Hevia, Rebeca Alonso-Arias, Alejandro Alvarez-Artime, Aida Rodriguez-Garcia, Sandrina Kinet, Ivan Gonzalez-Pola, Naomi Taylor, Juan C. Mayo, and Rosa M. Sainz
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Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
Glucose, chief metabolic support for cancer cell survival and growth, is mainly imported into cells by facilitated glucose transporters (GLUTs). The increase in glucose uptake along with tumor progression is due to an increment of facilitative glucose transporters as GLUT1. GLUT1 prevents cell death of cancer cells caused by growth factors deprivation, but there is scarce information about its role on the damage caused by glucose deprivation, which usually occurs within the core of a growing tumor. In prostate cancer (PCa), GLUT1 is found in the most aggressive tumors, and it is regulated by androgens. To study the response of androgen-sensitive and insensitive PCa cells to glucose deprivation and the role of GLUT1 on survival mechanisms, androgen-sensitive LNCaP and castration-resistant LNCaP-R cells were employed. Results demonstrated that glucose deprivation induced a necrotic type of cell death which is prevented by antioxidants. Androgen-sensitive cells show a higher resistance to cell death triggered by glucose deprivation than castration-resistant cells. Glucose removal causes an increment of H2O2, an activation of androgen receptor (AR) and a stimulation of AMP-activated protein kinase activity. In addition, glucose removal increases GLUT1 production in androgen sensitive PCa cells. GLUT1 ectopic overexpression makes PCa cells more resistant to glucose deprivation and oxidative stress-induced cell death. Under glucose deprivation, GLUT1 overexpressing PCa cells sustains mitochondrial SOD2 activity, compromised after glucose removal, and significantly increases reduced glutathione (GSH). In conclusion, androgen-sensitive PCa cells are more resistant to glucose deprivation-induced cell death by a GLUT1 upregulation through an enhancement of reduced glutathione levels. Keywords: Glut1, Prostate cancer, Glucose deprivation, Androgen receptor, Glutathione, Oxidative stress
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- 2018
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32. Thioredoxin 1 modulates apoptosis induced by bioactive compounds in prostate cancer cells
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Aida Rodriguez-Garcia, David Hevia, Juan C. Mayo, Pedro Gonzalez-Menendez, Lucia Coppo, Jun Lu, Arne Holmgren, and Rosa M. Sainz
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Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
Accumulating evidence suggests that natural bioactive compounds, alone or in combination with traditional chemotherapeutic agents, could be used as potential therapies to fight cancer. In this study, we employed four natural bioactive compounds (curcumin, resveratrol, melatonin, and silibinin) and studied their role in redox control and ability to promote apoptosis in androgen sensitive and insensitive prostate cancer cells. Here is shown that curcumin and resveratrol promote ROS production and induce apoptosis in LNCaP and PC-3. An increase in reactive species is a trigger event in curcumin-induced apoptosis and a consequence of resveratrol effects on other pathways within these cells. Moreover, here we demonstrated that these four compounds affect differently one of the main intracellular redox regulator, the thioredoxin system. Exposure to curcumin and resveratrol promoted TRX1 oxidation and altered its subcellular location. Furthermore, resveratrol diminished TRX1 levels in PC-3 cells and increased the expression of its inhibitor TXNIP. Conversly, melatonin and silibinin only worked as cytostatic agents, reducing ROS levels and showing preventive effects against TRX oxidation. All together, this work explores the effect of compounds currently tested as chemo-preventive agents in prostate cancer therapy, on the TRX1 redox state and function. Our work shows the importance that the TRX system might have within the differences found in their mechanisms of action. These bioactive compounds trigger different responses and affect ROS production and redox systems in prostate cancer cells, suggesting the key role that redox-related pathways might play in processes like differentiation or survival in prostate cancer. Keywords: Thioredoxin, Thioredoxin reductase, TXNIP, Prostate cancer, Redox signaling, Apoptosis
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- 2017
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33. THAP1: Role in Mouse Embryonic Stem Cell Survival and Differentiation
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Francesca Aguilo, Zuchra Zakirova, Katie Nolan, Ryan Wagner, Rajal Sharma, Megan Hogan, Chengguo Wei, Yifei Sun, Martin J. Walsh, Kevin Kelley, Weijia Zhang, Laurie J. Ozelius, Pedro Gonzalez-Alegre, Thomas P. Zwaka, and Michelle E. Ehrlich
- Subjects
Thanatos-associated protein domain-containing apoptosis-associated protein 1 ,THAP1 ,dystonia ,differentiation ,survival ,embryonic stem cells ,transcriptomics ,neuroectodermal differentiation ,apoptosis ,zinc finger transcription factor ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
THAP1 (THAP [Thanatos-associated protein] domain-containing, apoptosis-associated protein 1) is a ubiquitously expressed member of a family of transcription factors with highly conserved DNA-binding and protein-interacting regions. Mutations in THAP1 cause dystonia, DYT6, a neurologic movement disorder. THAP1 downstream targets and the mechanism via which it causes dystonia are largely unknown. Here, we show that wild-type THAP1 regulates embryonic stem cell (ESC) potential, survival, and proliferation. Our findings identify THAP1 as an essential factor underlying mouse ESC survival and to some extent, differentiation, particularly neuroectodermal. Loss of THAP1 or replacement with a disease-causing mutation results in an enhanced rate of cell death, prolongs Nanog, Prdm14, and/or Rex1 expression upon differentiation, and results in failure to upregulate ectodermal genes. ChIP-Seq reveals that these activities are likely due in part to indirect regulation of gene expression.
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- 2017
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34. Regulation of intraocular pressure by microRNA cluster miR-143/145
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Xinyu Li, Fangkun Zhao, Mei Xin, Guorong Li, Coralia Luna, Guigang Li, Qinbo Zhou, Yuguang He, Bo Yu, Eric Olson, Pedro Gonzalez, and Shusheng Wang
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Medicine ,Science - Abstract
Abstract Glaucoma is a major cause of irreversible blindness worldwide. Elevated intraocular pressure (IOP), which causes optic nerve damage and retinal ganglion cell death, is the primary risk factor for blindness in glaucoma patients. IOP is controlled by the balance between aqueous humor secretion from the ciliary body (CB) and its drainage through the trabecular meshwork (TM). How microRNAs (miRs) regulate IOP and glaucoma in vivo is largely unknown. Here we show that miR-143 and miR-145 expression is enriched in the smooth muscle and trabecular meshwork in the eye. Targeted deletion of miR-143/145 in mice results in significantly reduced IOP, consistent with an ~2-fold increase in outflow facilities. However, aqueous humor production in the same mice appears to be normal based on a microbeads-induced glaucoma model. Mechanistically, we found that miR-143/145 regulates actin dynamics and the contractility of TM cells, consistent with its regulation of actin-related protein complex (ARPC) subunit 2, 3, and 5, as well as myosin light chain kinase (MLCK) in these cells. Our data establish miR-143/145 as important regulators of IOP, which may have important therapeutic implications in glaucoma.
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- 2017
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35. Generation of Spinocerebellar Ataxia Type 2 induced pluripotent stem cell lines, CHOPi002-A and CHOPi003-A, from patients with abnormal CAG repeats in the coding region of the ATXN2 gene
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Jean Ann Maguire, Alyssa L. Gagne, Pedro Gonzalez-Alegre, Beverly L. Davidson, Vikram Shakkottai, Paul Gadue, and Deborah L. French
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Biology (General) ,QH301-705.5 - Abstract
Spinocerebellar Ataxia Type 2 (SCA2) is an autosomal dominant disease characterized by progressive degeneration of the cerebellum, brain stem, and spinal cord. SCA2 is caused by spontaneous misfolding and aggregate formation from abnormal CAG trinucleotide repeat expansion in the coding region of the ATXN2 gene. Here we describe the generation of two distinct iPSC lines from patients with SCA2.
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- 2019
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36. Development of Europium-Sensitized Fluorescence-Based Method for Sensitive Detection of Oxytetracycline in Citrus Tissues
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Faraj Hijaz, Yasser Nehela, Pedro Gonzalez-Blanco, and Nabil Killiny
- Subjects
Huanglongbing ,oxytetracycline ,OTC ,europium ,4-epi-OTC ,antibiotic ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Antimicrobial compounds have been successfully used to control many plant and animal diseases. Recently, oxytetracycline (OTC) and streptomycin have been approved for the treatment of Huanglongbing in citrus. Since the application of OTC is under strict regulations, several methods have been developed to determine and monitor its levels in the environment including high-performance liquid chromatography, ELISA, colorimetric, and fluorometric assays. In this study, we developed a fluorometric method for the determination of OTC in plant tissues based on its complexation with europium. Our preliminary trials showed that phenols and flavonoids interfere with the europium assay by reacting with the sensitizing reagent, cetyltrimethylammonium chloride. Consequently, we used the 60 mg hydrophilic–lipophilic balanced (HLB) cartridges to purify the OTC from the plant matrix. The recovery of OTC from spiked leaf samples was 75 ± 7.6%. Using the 500 mg HLB, we were able to detect 0.3 ppm OTC in the final sample extract, which corresponds to 3 µg g−1 fresh weight (FWT). The developed method was successfully used to measure the level of OTC in leaves obtained from trunk-injected trees. The results obtained by the europium method were similar to those obtained using the ELISA assay. We also tested the cross-reactivity of OTC metabolites with the europium method. The 4-epi-OTC showed a high cross-reactivity (50.0 ± 3.6%) with europium assay, whereas α-apo-OTC and β-apo-OTC showed small cross-reactivity. We showed that the europium-sensitized fluorescence-based method can be successfully used to assess OTC in citrus plant tissues after a cleanup step. Our results showed that this method was sensitive, reproducible, and can be used to analyze many samples simultaneously.
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- 2021
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37. IoTCrawler: Challenges and Solutions for Searching the Internet of Things
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Thorben Iggena, Eushay Bin Ilyas, Marten Fischer, Ralf Tönjes, Tarek Elsaleh, Roonak Rezvani, Narges Pourshahrokhi, Stefan Bischof, Andreas Fernbach, Josiane Xavier Parreira, Patrik Schneider, Pavel Smirnov, Martin Strohbach, Hien Truong, Aurora González-Vidal, Antonio F. Skarmeta, Parwinder Singh, Michail J. Beliatis, Mirko Presser, Juan A. Martinez, Pedro Gonzalez-Gil, Marianne Krogbæk, and Sebastian Holmgård Christophersen
- Subjects
Internet of Things ,search ,security ,privacy ,reliability ,IoT search framework ,Chemical technology ,TP1-1185 - Abstract
Due to the rapid development of the Internet of Things (IoT) and consequently, the availability of more and more IoT data sources, mechanisms for searching and integrating IoT data sources become essential to leverage all relevant data for improving processes and services. This paper presents the IoT search framework IoTCrawler. The IoTCrawler framework is not only another IoT framework, it is a system of systems which connects existing solutions to offer interoperability and to overcome data fragmentation. In addition to its domain-independent design, IoTCrawler features a layered approach, offering solutions for crawling, indexing and searching IoT data sources, while ensuring privacy and security, adaptivity and reliability. The concept is proven by addressing a list of requirements defined for searching the IoT and an extensive evaluation. In addition, real world use cases showcase the applicability of the framework and provide examples of how it can be instantiated for new scenarios.
- Published
- 2021
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38. Plant Functional Genomics in A Few Days: Laser-Assisted Delivery of Double-Stranded RNA to Higher Plants
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Nabil Killiny, Pedro Gonzalez-Blanco, Siddarame Gowda, Xavier Martini, and Ed Etxeberria
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citrus ,laser light ,RNA interference ,phytoene desaturase ,functional genomics ,Botany ,QK1-989 - Abstract
The technology of transgenic plants is challenging and time consuming, especially for higher plants and trees such as citrus. Double-stranded RNA (dsRNA) delivery via a plant virus is an alternative method to create transgenic plants by suppressing the expression of plant endogenous genes. Citrus tristeza virus-based vector has been constructed specifically for use in citrus trees. However, this is time-consuming, as it can take up to nine months to produce the desired phenotype. Here we describe a much faster method for the study of gene function in citrus trees. In the current study, we used laser light for the delivery of dsRNA to citrus leaves. We targeted the endogenous reporter gene phytoene desaturase (PDS) and obtained the classical phenotype (leaf bleaching) in only three days after the laser-assisted delivery. Interestingly, the phenotype response was systemic, which indicates the movement of dsRNA and/or ssRNA within the plants. In addition, dsRNAs were taken up by phloem cells and the bleaching phenotype was clear around the main veins. In conclusion, the delivery of dsRNA to plants through laser treatment may provide a fast and more specific tool to study the gene function in higher plants and trees.
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- 2021
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39. Effect of Adjuvants on Oxytetracycline Uptake upon Foliar Application in Citrus
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Nabil Killiny, Faraj Hijaz, Pedro Gonzalez-Blanco, Shelley E. Jones, Myrtho O. Pierre, and Christopher I. Vincent
- Subjects
oxytetracycline ,adjuvant ,foliar spray ,cuticle ,laser ,citrus ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Recently in Florida, foliar treatments using products with the antibiotics oxytetracycline and streptomycin have been approved for the treatment of citrus Huanglongbing (HLB), which is caused by the putative bacterial pathogen ‘Candidatus Liberibacter asiaticus’. Herein, we assessed the levels of oxytetracycline and ‘Ca. L. asiaticus’ titers in citrus trees upon foliar applications with and without a variety of commercial penetrant adjuvants and upon trunk injection. The level of oxytetracycline in citrus leaves was measured using an oxytetracycline ELISA kit and ‘Ca. L. asiaticus’ titer was measured using quantitative PCR. Low levels of oxytetracycline were taken up by citrus leaves after foliar sprays of oxytetracycline in water. Addition of various adjuvants to the oxytetracycline solution showed minimal effects on its uptake by citrus leaves. The level of oxytetracycline in leaves from trunk-injected trees was higher than those treated with all foliar applications. The titer of ‘Ca. L. asiaticus’ in the midrib of leaves from trees receiving oxytetracycline by foliar application was not affected after four days and thirty days of application, whereas the titer was significantly reduced in oxytetracycline-injected trees thirty days after treatment. Investigation of citrus leaves using microscopy showed that they are covered by a thick lipidized cuticle. Perforation of citrus leaf cuticle with a laser significantly increased the uptake of oxytetracycline, decreasing the titer of ‘Ca. L. asiaticus’ in citrus leaves upon foliar application. Taken together, our findings indicate that trunk injection is more efficient than foliar spray even after the use of adjuvants. Our conclusion could help in setting useful recommendations for the application of oxytetracycline in citrus to improve tree health, minimize the amount of applied antibiotic, reduce environmental exposure, and limit off-target effects.
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- 2020
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40. Lightweight Data-Security Ontology for IoT
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Pedro Gonzalez-Gil, Juan Antonio Martinez, and Antonio F. Skarmeta
- Subjects
iot ,security ontolgoy ,data-security ,certification ,regulation ,provenance ,Chemical technology ,TP1-1185 - Abstract
Although current estimates depict steady growth in Internet of Things (IoT), many works portray an as yet immature technology in terms of security. Attacks using low performance devices, the application of new technologies and data analysis to infer private data, lack of development in some aspects of security offer a wide field for improvement. The advent of Semantic Technologies for IoT offers a new set of possibilities and challenges, like data markets, aggregators, processors and search engines, which rise the need for security. New regulations, such as GDPR, also call for novel approaches on data-security, covering personal data. In this work, we present DS4IoT, a data-security ontology for IoT, which covers the representation of data-security concepts with the novel approach of doing so from the perspective of data and introducing some new concepts such as regulations, certifications and provenance, to classical concepts such as access control methods and authentication mechanisms. In the process we followed ontological methodologies, as well as semantic web best practices, resulting in an ontology to serve as a common vocabulary for data annotation that not only distinguishes itself from previous works by its bottom-up approach, but covers new, current and interesting concepts of data-security, favouring implicit over explicit knowledge representation. Finally, this work is validated by proof of concept, by mapping the DS4IoT ontology to the NGSI-LD data model, in the frame of the IoTCrawler EU project.
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- 2020
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41. Identification of sieve elements and companion cell protoplasts by a combination of brightfield and fluorescence microscopy
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Prabhjot Kaur, Pedro Gonzalez, Manjul Dutt, and Ed Etxeberria
- Subjects
citrus phloem ,companion cells ,phloem protoplasts ,sieve elements ,Biology (General) ,QH301-705.5 ,Botany ,QK1-989 - Abstract
Premise of the Study Phloem‐limited diseases are becoming increasingly pervasive, threatening the existence of crops worldwide. Studies of phloem diseases are complicated by the inaccessibility of the phloem tissue. Phloem cells are located deep inside the plant body, are interspersed with other cell types, are among the smallest cells in the plant kingdom, and make up a small percentage of the total cell population in a plant. These properties make phloem cells difficult to investigate. Methods We used leaf midrib protoplasts and a combination of organelle‐specific dyes including Neutral Red (acidic compartments), MitoTracker Green (mitochondria), Hoechst 3342 (nucleus), and chloroplast autofluorescence. We examined the protoplasts under light and fluorescence microscopy. Results When observed using brightfield and fluorescence microscopy, sieve element protoplasts were distinguished by the lack of vacuole and a nucleus, and by containing various mitochondria. Companion cells showed a dense cytoplasm and various small vacuoles. They also revealed their characteristic large nucleus and abundant mitochondria. Discussion We present evidence that a combination of organelle‐specific dyes and autofluorescence allows for the identification of sieve elements and companion cell protoplasts from citrus leaf tissue.
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- 2018
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42. Mutations in THAP1/DYT6 reveal that diverse dystonia genes disrupt similar neuronal pathways and functions.
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Zuchra Zakirova, Tomas Fanutza, Justine Bonet, Ben Readhead, Weijia Zhang, Zhengzi Yi, Genevieve Beauvais, Thomas P Zwaka, Laurie J Ozelius, Robert D Blitzer, Pedro Gonzalez-Alegre, and Michelle E Ehrlich
- Subjects
Genetics ,QH426-470 - Abstract
Dystonia is characterized by involuntary muscle contractions. Its many forms are genetically, phenotypically and etiologically diverse and it is unknown whether their pathogenesis converges on shared pathways. Mutations in THAP1 [THAP (Thanatos-associated protein) domain containing, apoptosis associated protein 1], a ubiquitously expressed transcription factor with DNA binding and protein-interaction domains, cause dystonia, DYT6. There is a unique, neuronal 50-kDa Thap1-like immunoreactive species, and Thap1 levels are auto-regulated on the mRNA level. However, THAP1 downstream targets in neurons, and the mechanism via which it causes dystonia are largely unknown. We used RNA-Seq to assay the in vivo effect of a heterozygote Thap1 C54Y or ΔExon2 allele on the gene transcription signatures in neonatal mouse striatum and cerebellum. Enriched pathways and gene ontology terms include eIF2α Signaling, Mitochondrial Dysfunction, Neuron Projection Development, Axonal Guidance Signaling, and Synaptic LongTerm Depression, which are dysregulated in a genotype and tissue-dependent manner. Electrophysiological and neurite outgrowth assays were consistent with those enrichments, and the plasticity defects were partially corrected by salubrinal. Notably, several of these pathways were recently implicated in other forms of inherited dystonia, including DYT1. We conclude that dysfunction of these pathways may represent a point of convergence in the pathophysiology of several forms of inherited dystonia.
- Published
- 2018
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43. Polyphenols and IUGR pregnancies: Maternal hydroxytyrosol supplementation improves prenatal and early-postnatal growth and metabolism of the offspring.
- Author
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Marta Vazquez-Gomez, Consolación Garcia-Contreras, Laura Torres-Rovira, José Luis Pesantez, Pedro Gonzalez-Añover, Ernesto Gomez-Fidalgo, Raúl Sanchez-Sanchez, Cristina Ovilo, Beatriz Isabel, Susana Astiz, and Antonio Gonzalez-Bulnes
- Subjects
Medicine ,Science - Abstract
Hydroxytyrosol is a polyphenol with antioxidant, metabolism-regulatory, anti-inflammatory and immuno-modulatory properties. The present study aimed to determine whether supplementing the maternal diet with hydroxytyrosol during pregnancy can improve pre- and early post-natal developmental patterns and metabolic traits of the offspring. Experiment was performed in Iberian sows fed a restricted diet in order to increase the risk of IUGR. Ten sows were treated daily with 1.5 mg of hydroxytyrosol per kg of feed between Day 35 of pregnancy (30% of total gestational period) until delivery whilst 10 animals were left untreated as controls. Number and weight of offspring were assessed at birth, on post-natal Day 15 and at weaning (25 days-old). At weaning, body composition and plasma indexes of glucose and lipids were measured. Treatment with hydroxytyrosol was associated with higher mean birth weight, lower incidence of piglets with low birth weight. Afterwards, during the lactation period, piglets in the treated group showed a higher body-weight than control piglets; such effects were even stronger in the most prolific litters. These results suggest that maternal supplementation with hydroxytyrosol may improve pre- and early post-natal development of offspring in pregnancies at risk of IUGR.
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- 2017
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44. Short communication. Effects of the time to change from incubation to hatching temperature on the artificial incubation of red-legged partridge (Alectoris rufa) eggs
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Paloma Gomez-de-Travecedo, Francisco P. Caravaca, and Pedro Gonzalez-Redondo
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egg weight loss ,game farming ,hatchability ,incubation length ,Agriculture - Abstract
This study investigates, in red-legged partridge (Alectoris rufa), the effects of the time to change from incubation to hatching temperature on egg weight loss, hatchability, chick weight at hatch, incubation length, and development stage at embryonic mortality. Five batches of 80 eggs each were incubated at 37.8ºC during the first 18, 19, 20, 21 or 22 d of incubation, and subsequently at 37.5ºC until hatching. Hatchability, development stage at embryonic mortality and chick weight at hatch were not affected by the time of temperature change (p > 0.05). However, incubation length and egg weight loss after 21 d of incubation as representative of that of developed embryos were influenced by the incubation treatment (p<0.001 and p<0.05, respectively). Thus, eggs maintained at the incubation temperature of 37.8ºC for 22 d not only hatched earlier (23.04 d) but also with lower dispersion than eggs from the other treatments. As hatching may start around day 22 of incubation, to improve hatching synchrony we could recommend to move A. rufa eggs from the incubator, set at 37.8ºC, to the hatcher on the 21st d of incubation keeping the temperature unchanged, and reduce it to 37.5ºC on the 22nd d. Nevertheless, further research should be carried out to study the effect of this temperature scheduling on chick growth and performance.
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- 2014
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45. Large-Scale microRNA Expression Profiling Identifies Putative Retinal miRNA-mRNA Signaling Pathways Underlying Form-Deprivation Myopia in Mice.
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Andrei V Tkatchenko, Xiaoyan Luo, Tatiana V Tkatchenko, Candida Vaz, Vivek M Tanavde, Sebastian Maurer-Stroh, Stefan Zauscher, Pedro Gonzalez, and Terri L Young
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Medicine ,Science - Abstract
Development of myopia is associated with large-scale changes in ocular tissue gene expression. Although differential expression of coding genes underlying development of myopia has been a subject of intense investigation, the role of non-coding genes such as microRNAs in the development of myopia is largely unknown. In this study, we explored myopia-associated miRNA expression profiles in the retina and sclera of C57Bl/6J mice with experimentally induced myopia using microarray technology. We found a total of 53 differentially expressed miRNAs in the retina and no differences in miRNA expression in the sclera of C57BL/6J mice after 10 days of visual form deprivation, which induced -6.93 ± 2.44 D (p < 0.000001, n = 12) of myopia. We also identified their putative mRNA targets among mRNAs found to be differentially expressed in myopic retina and potential signaling pathways involved in the development of form-deprivation myopia using miRNA-mRNA interaction network analysis. Analysis of myopia-associated signaling pathways revealed that myopic response to visual form deprivation in the retina is regulated by a small number of highly integrated signaling pathways. Our findings highlighted that changes in microRNA expression are involved in the regulation of refractive eye development and predicted how they may be involved in the development of myopia by regulating retinal gene expression.
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- 2016
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46. Cell-autonomous alteration of dopaminergic transmission by wild type and mutant (ΔE) TorsinA in transgenic mice
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Michelle E. Page, Li Bao, Pierrette Andre, Joshua Pelta-Heller, Emily Sluzas, Pedro Gonzalez-Alegre, Alexey Bogush, Loren E. Khan, Lorraine Iacovitti, Margaret E. Rice, and Michelle E. Ehrlich
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Dystonia ,Tyrosine hydroxylase ,Dopamine ,DYT1 ,TorsinA ,Striatum ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Early onset torsion dystonia is an autosomal dominant movement disorder of variable penetrance caused by a glutamic acid, i.e. ΔE, deletion in DYT1, encoding the protein TorsinA. Genetic and structural data implicate basal ganglia dysfunction in dystonia. TorsinA, however, is diffusely expressed, and therefore the primary source of dysfunction may be obscured in pan-neuronal transgenic mouse models. We utilized the tyrosine hydroxylase (TH) promoter to direct transgene expression specifically to dopaminergic neurons of the midbrain to identify cell-autonomous abnormalities. Expression of both the human wild type (hTorsinA) and mutant (ΔE-hTorsinA) protein resulted in alterations of dopamine release as detected by microdialysis and fast cycle voltammetry. Motor abnormalities detected in these mice mimicked those noted in transgenic mice with pan-neuronal transgene expression. The locomotor response to cocaine in both TH-hTorsinA and TH-ΔE-hTorsinA, in the face of abnormal extracellular DA levels relative to non-transgenic mice, suggests compensatory, post-synaptic alterations in striatal DA transmission. This is the first cell-subtype-specific DYT1 transgenic mouse that can serve to differentiate between primary and secondary changes in dystonia, thereby helping to target disease therapies.
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- 2010
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47. Evaluating Familial Essential Tremor with Novel Genetic Approaches: Is it a Genotyping or Phenotyping Issue?
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Pedro Gonzalez-Alegre, Jorge Di Paola, Kai Wang, Shay Fabbro, Hung-Chun Yu, Tamim H. Shaikh, Benjamin W. Darbro, and Alexander G. Bassuk
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Diseases of the musculoskeletal system ,RC925-935 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Background: Essential tremor is a common movement disorder with a strong heritable component. Large families with inherited forms of essential tremor have undergone genetic analyses by different approaches. However, our knowledge of genetic variants unequivocally linked to essential tremor is remarkably limited. Several explanations have been put forth to explain this challenge, including the possibility of mutations in non-coding areas of the genome.Methods: We encountered a family with highly penetrant, autosomal dominant tremor. We hypothesized that, if a single coding gene mutation was responsible for the phenotype, novel genetic tools would allow us to identify it. We employed single nucleotide polymorphism (SNP) arrays in 17 members of this family followed by next generation whole-exome sequencing in five affected subjects.Results: We did not identify any copy number variant or mutation that segregated with the disease phenotype.Discussion: This study emphasizes the remarkably challenging field of tremor genetics and indicates that future studies should perhaps shift to analysis of the non-coding genome.
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- 2014
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48. Clinical, Etiological and Therapeutic Features of Jaw-opening and Jaw-closing Oromandibular Dystonias: A Decade of Experience at a Single Treatment Center
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Pedro Gonzalez-Alegre, Robert L. Schneider, and Henry Hoffman
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Diseases of the musculoskeletal system ,RC925-935 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Background: Dystonia is a heterogeneous hyperkinetic disorder. The anatomical location of the dystonia helps clinicians guide their evaluation and treatment plan. When dystonia involves masticatory, lingual, and pharyngeal muscles, it is referred to as oromandibular dystonia (OMD).Methods: We identified patients diagnosed with OMD in a Movement Disorders Clinic and Laryngeal Movement Disorders Clinic from a single institution. Demographic, etiological, clinical, and therapeutic information was retrospectively reviewed for patients with jaw‐opening (O‐OMD) and jaw‐closing (C‐OMD) OMD.Results: Twenty‐seven patients were included. Their average age of onset was in the sixth decade of life and there was a female predominance. Etiological factors linked in this study to OMD included a family history of dystonia or essential tremor, occupation, cerebellar disease, a dental disorder, and tardive syndrome. Clinically, patients with C‐OMD presented with more prominent feeding difficulties, but seemed to respond better to therapy than those with O‐OMD. In addition to the known benefits of botulinum toxin therapy, patients who described sensory tricks obtained benefit from the use of customized dental prosthesis.Discussion: This works provides useful information on potential etiological factors for OMD and its response to therapy, and highlights the potential benefit of dental prosthesis for the treatment of OMD.
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- 2014
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49. Identification and Isolation of Differentially Expressed Genes from Very Small Tissue Samples
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Pedro Gonzalez, J. Samuel Zigler, David L. Epstein, and Teresa Borrás
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Biology (General) ,QH301-705.5 - Abstract
Identification of differentially expressed genes from tissue samples weighing only a few milligrams has remained a major challenge. Here, we describe a novel and simple strategy that uses standard molecular biology equipment and commercially available kits. The approach combines isolation of total RNA by silica-gel binding, reverse transcription using anchored modified, 5′ end enhancers oligonucleotides, exponential amplification of the single-stranded cDNA and hybridization to high-density cDNA filter arrays. The method was tested by comparing genes expressed on freshly isolated human trabecular meshwork tissue with those expressed in corresponding primary cells at third passage. Validation was achieved by using two biological properties: (i) hybridization, to identify the differentially expressed genes, and (ii) PCR amplification, to confirm their distinct expression. The strategy presented allows the identification of differentially expressed genes and/or uncharacterized expressed sequence tags (ESTs) in very small tissue samples, including those from clinical specimens.
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- 1999
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50. Presence of human papilloma virus in a series of breast carcinoma from Argentina.
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Ana Laura Pereira Suarez, Mario Alejandro Lorenzetti, Rene Gonzalez Lucano, Melina Cohen, Hugo Gass, Paula Martinez Vazquez, Pedro Gonzalez, Maria V Preciado, and Paola Chabay
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Medicine ,Science - Abstract
BackgroundThe etiology and the molecular mechanisms related to breast carcinogenesis remain poorly understood. Some recent reports have examined the role of Human Papillomavirus (HPV) in this disease. The purpose of this study was to determine the prevalence of HPV in breast cancer.MethodsSixty one fresh frozen breast cancers samples were analyzed. Samples were tested for HPV by PCR, and products were automatically sequenced. Findings were correlated with clinical and pathological characteristics.ResultsThe HPV DNA prevalence in the breast cancer samples was 26% (16/61). Clinical parameters were not statistically associated with HPV presence (p>0.05 χ(2) test). Sequence analysis in a subgroup of cases indicates the prevalence of low risk HPV11, followed by high risk HPV16. We found no HPV transcriptional activity.ConclusionThe present study demonstrated for the first time in Argentina the presence of HPV in a proportion of the malignant breast tissues. This finding suggests that HPV may have a biological significance in breast carcinogenesis.
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- 2013
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