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Root-knot nematodes (RKNs) are the most destructive nematode species in main pistachio cultivation areas of Iran, and adversely affect crop quality and yield. So far, Meloidogyne incognita and M. javanica have been reported infecting pistachio. In this study, four populations of M. arenaria were found infecting pistachio in Kerman and Khorasan Razavi provinces. The morphology and morphometrics of the recovered populations closely match the data given for other populations of the species. Molecular characterization of the recovered populations was performed by sequencing three genomic and mitochondrial regions, including D2-D3 of LSU rDNA, COII-16S and Nad5 mtDNA. The D2-D3 sequences had more than 99% identity with many sequences of tropical species. The COII-16S sequences had more than 99% identity with sequences of M. arenaria, M. morocciensis and M. thailandica. The Nad5 sequences had 99.81% identity with some sequences of M. arenaria. The D2-D3 and COII-16S sequences of M. arenaria did not form independent clades in corresponding Bayesian trees, but Nad5 sequences formed a monophyletic group in corresponding phylogeny. Based on this study, M. arenaria is present in Iran’s pistachio gardens, necessitating appropriate management measures.

Nothotylenchus savadkoohensis n. sp. was recovered from rotten wood samples of an unidentified forest tree in the Mazandaran province and described herein. It is mainly characterized by an elongated conoid tail ending in a sharply pointed tip and four lines in the lateral field. Females of the new species have 379–662 μm long bodies with 5.8–6.9 μm long stylets ending in fine posteriorly sloping knobs, the metacorpus not valvate, the pharyngeal bulb slightly overlapping the intestine, and the vulva at 76.5–84.0% of body length. Males are also common and have 13.0–14.5 μm long spicules and bursa cloacal. By having an elongated conoid tail and four lines in the lateral field, the new species comes close to four known species, namely N. acris, N. acutus, N. antricolus, and N. truncatus. The morphological differences between the new species and the abovementioned species are discussed. The new species was sequenced for its D2–D3 segment of LSU and ITS rDNA regions. In the LSU phylogenetic tree, the currently available LSU sequences of the genus Nothotylenchus occupied distant placements from each other and the LSU sequence of the new species formed clade with a sequence assigned to Neotylenchus sp. In ITS phylogeny, the newly generated sequence of the new species formed a clade with a clade that includes sequences of Ditylenchus sp. and Neomisticius platypi and N. variabilis.

During a nematological survey in southern Iran, a population belonging to the family Tylenchidae was recovered from a tomato field in Bushehr province. The recovered population belongs to the genus Filenchus, was described and illustrated herein as F. multistriatus n. sp. It is mainly characterized by having a wide and low annulated lip region continuous with adjacent body; amphidial openings confined to the labial plate; four lines in lateral fields forming three bands, with the two outer bands broken by transverse, and the inner one broken by both transverse and longitudinal lines; and median bulb oval with visible valve and elongate-conoid tail uniformly and gradually narrowing toward the distal region, ending in a widely rounded tip. Its morphological and morphometric differences with three closely similar species were discussed. The phylogenetic relationships of the new species with other relevant genera and species were reconstructed using partial sequences of small, and large subunit ribosomal DNA (SSU and LSU rDNA) sequences. Morphometric and morphological data were also provided for an Iranian population of F. sandneri recovered from Bushehr province. Both populations were characterised using SEM data.

A new species from the family Tylenchidae was recovered in the grasslands of Isfahan province, Iran, and is herein described based on morphological and molecular data. Ottolenchus isfahanicus n. sp. is mainly characterized by having a faintly annulated cuticle; elongated, slightly sigmoid amphidial apertures developed metacorpus with distinct valve under LM; vulva located at 69.472.3% of body length; large spermatheca about 2.75 times of corresponding body width; and elongated conoid tail with broadly rounded tip. SEM observations showed that the lip region is smooth; the amphidial apertures are elongated, slightly sigmoid slits; and the lateral field is a simple band. It is further characterized by 477-to-515-μm-long females with delicate 5.7-to-6.9-μm-long stylets with small, slightly posteriorly sloping knobs, as well as functional males, in the population. The new species closely resembles O. facultativus, but is separated from it based on morphological and molecular data. It was further morphologically compared with O. discrepans, O. fungivorus, and O. sinipersici. The phylogenetic relationships of the new species with other relevant genera and species were reconstructed using near-full-length sequences of small subunit and D2-D3 expansion segments of large subunit (SSU and LSU D2-D3). In the inferred SSU phylogeny, the newly generated sequence of Ottolenchus isfahanicus n. sp. formed a clade with two sequences of O. sinipersici and sequences assigned to O. facultativus and O. fungivorus. In the inferred LSU phylogeny, the three newly generated sequences of the new species and LSU sequences of O. sinipersici and O. discrepans formed a clade.

A population of Deladenus, representing a new species, was recovered from Bonab’s Ghara-Gheshlagh lagoon. It is mainly characterized by having a long body (1051–1185 μm), long distance of anterior end to pharyngeal glands end (270–312 μm), six lines in lateral fields, and a short mucro-like differentiation on the tail tip. Furthermore, it has a small-sized stylet (8.5–11.0 μm) with three knobs, no postvulval uterine sac, and males with 24- to 28-μm-long tylenchoid spicules and penial tube. With six lateral lines, the new species is comparable with seven species of the genus: D. apopkaetus, D. brevis, D. cocophilus, D. durus, D. obtusicaudatus, D. processus, and D. ulani. It was furthermore compared with D. oryzae with an unknown number of lateral lines and D. aridus, D. obesus, and D. parvus having a different number of lateral lines but similar morphology. In the molecular phylogenic analyses using small and large subunit ribosomal DNA (SSU and LSU D2-D3 rDNA) sequences, the relationships of the new species with other species and genera were not resolved in SSU phylogeny. However, it formed a clade with Deladenus sp. and D. brevis in LSU phylogeny.

Pistachio yield is annually reduced due to root-knot nematode infections. In order to evaluate its resistance to Meloidogyne javanica, three domestic pistachio rootstocks, namely, Badami, Ghazvini and Sarakhs, and a wild pistachio, Baneh (Pistacia atlantica subsp. mutica), were selected. Their response to the nematode infection was evaluated based on different plant and nematode indexes, 120 days post-inoculation (dpi). The penetration and development rate of nematode in roots of these four pistachio rootstocks were evaluated at different time points by acid fuchsin staining. Based on the measured indexes, Badami, Ghazvini, Sarakhs, and Baneh rootstocks ranked as susceptible, moderately resistant, moderately resistant, and resistant, respectively. The penetration rate of second-stage nematode juveniles (J2) into four rootstocks was discussed. The first “midstage” or swollen juveniles appeared at 4 dpi but to a lesser extent in Ghazvini, Sarakhs, and Baneh cultivars. The first females were seen in Badami at 21 dpi, in Ghazvini and Sarakhs at 35 dpi, and in Baneh at 45 dpi. Three types of defense responses were distinguished and characterized in the examined pistachio rootstocks: (i) a hypersensitive response (HR)-like reaction in the cortex in Ghazvini, Sarakhs, and Baneh root tips at 4 dpi and 6 dpi; (ii) an HR response, degrading J2 which induce giant cells in the vascular cylinder of all rootstocks, at 6 dpi and 10 dpi; and (iii) an HR response, degrading females and giant cells in the vascular cylinder of all rootstocks at 15 dpi onward. These observations open new fields of study in breeding programs of this crop.

A new species of the genus Boleodorus, recovered from southern Iran, is described and illustrated based upon morphological and molecular data. B. bushehrensis n. sp. is mainly characterized by having a wide and low cephalic region (which is continuous with the adjacent body), the oral aperture in a depression in side view under a light microscope, four lines in the lateral field, weak metacorpus with a vestigial-to-invisible valve, and short (26–38 mm long) hooked tail with rounded tip. The females are 334–464 mm long and have a spherical spermatheca filled with spheroid sperm; males have 11.5- to 12.0-mm-long spicules and weakly developed bursa. The new species has an annulated low cephalic region, four large cephalic papillae, and small crescent-shaped amphidial openings when observed by scanning electron microscopy (SEM). Its morphological and morphometric differences with seven known species are discussed. The phylogenetic relationships of the new species with other relevant genera and species have been studied using partial sequences of small and large subunit ribosomal DNA (SSU and LSU rDNA). In both the SSU and LSU phylogenies, the sequences of B. bushehrensis n. sp. and other Boleodorus spp. formed a clade. A second species, B. thylactus, when studied under SEM, has a raised, smooth cephalic region, four large cephalic papillae, and oblique amphidial slits, with the oral opening in a depression.

The morphology and morphometric characteristics of a Longidorus population recovered from a wheat-potato field in Hamadan province, western Iran, fit well with those given for two species, L. proximus and L. israelensis. The Iranian population was characterized by 5.6 to 8.6-mm-long females having a 17 to 21-µm-wide lip region separated from the rest of the body by a shallow depression, pocket-shaped amphidial fovea with a simple base and a ventral enlargement, a guiding ring at 31 to 40 µm distance from the anterior end, 108 to 127-µm-long odontostyle, 58 to 64-µm-long odontophore, 101 to 129-µm-long pharyngeal bulb with remarkably larger dorsal gland nucleus (at 49 to 53% of the bulb length) and two smaller ventrosublateral nuclei (at 66 to 76% of the pharyngeal bulb length), four juvenile developmental stages, and a rare male. The morphological and molecular data corroborated its assignment to the species L. proximus. In molecular phylogenetic analyses using partial LSU rDNA D2-D3 sequences, the presently studied Iranian population and previously sequenced isolates of L. proximus formed a clade with L. cretensis, L. iranicus, L. pseudoelongatus, and L. closelongatus, all except L. pseudoelongatus with no available data, having the similar pharyngeal gland nuclei size and arrangement. In internal transcribed spacer 1 (ITS1) phylogeny, it formed a clade with L. sturhani and four aforementioned species. The characters delimiting the two species L. proximus and L. israelensis were discussed and a new synonymy was proposed.

Due to importance and effectiveness of some entomopathogenic or insect parasitic nematodes in controlling of agricultural pests, or pests of non-agricultural plants, a study was conducted in order to identify the species of this group of nematodes in city of Tehran. As the result, three species belonging to the genus Oscheius were recovered in association with bark samples having the bark beetle galleries. Morphological and molecular data were provided for two recently recovered species of the genus, namely O. necromenus and O. onirici. Molecular data were also provided for a recently recovered isolate of O. tipulae. All three species were recovered in association with bark samples collected from dead trees in the city of Tehran. Morphological characters and morphometric data of the two aforementioned species are in accordance with the data given in their original descriptions. One recovered individual from a small bark sample characterized by its short body length was sequenced for its 28S and internal transcribed spacer (ITS) rDNA loci, and the results of BLAST search using the newly obtained partial sequences revealed that it belonged to O. tipulae. Molecular phylogenetic studies revealed recently sequenced Iranian populations of O. onirici and O. tipulae forming a clade with other isolates/populations of these species in ITS tree with maximal Bayesian posterior probability (BPP), and presently sequenced isolates of O. tipulae and O. necromenus form a clade with other isolates of these species in 28S tree. The two species O. onirici and O. necromenus were reported in Iran for the first time.

Using integrated pest management without relying on chemical pesticides is one of the most attractive approaches to controlling plant pathogens. Among them, using resistant cultivars or rootstocks against diseases in combination with beneficial microorganisms has attracted special attention. The citrus nematode is one of the major constraints of citrus cultivation worldwide. We showed that the mycorrhizal arbuscular fungus, Funneliformis mosseae , increased growth parameters including shoot and root length and biomass of two main rootstocks of citrus, sour orange and Volkamer lemon, in noninfected and infected plants with citrus nematode. It decreased the infection rate by citrus nematode in both rootstocks compared with nonmycorrhizal plants. The rate of decrease in nematode infection was highest when plants were pre-inoculated with F. mosseae and was lowest when nematode was inoculated before F. mosseae. However, when nematode was inoculated before the fungus, the fungus was still able to mitigate the negative effect of infection by nematode compared with plants inoculated with nematode only. This suggests that the timing of inoculation plays a crucial role in the effectiveness of F. mosseae in reducing nematode infection. Moreover, monitoring of the expression of two genes, phenylalanine ammonia-lyase and β -1,3-glucanase , which are involved in systemic-acquired resistance (SAR) showed that although they were significantly upregulated in mycorrhizal plants compared with nonmycorrhizal plants, they showed the highest expression when plants were pretreated with fungus before nematode inoculation, thus, indicating that plants were primed. In summary, F. mosseae primes the defense-related genes involved in SAR, increasing plant defensive capacity and boosting growth parameters in citrus rootstock. This has important implications for the agricultural industry. [ABSTRACT FROM AUTHOR]

The article discusses the amendments made to the diagnosis of Ektaphelenchus cupressi, a species of nematode. The study was conducted in forests near Elimalat lake in Iran, where a population of E. cupressi was found in dead and rotten wood samples. The researchers compared the Elimalat population with previously described Ektaphelenchus species and confirmed its identity as E. cupressi through morphological and genetic analysis. The article provides detailed descriptions of the cephalic region, stylet, and female posterior body region of E. cupressi, highlighting the unique features that help distinguish this species. The research was supported by Tarbiat Modares University. [Extracted from the article]

Summary: Three populations of Pauronemoides siddiqii n. gen., n. sp. were recovered from three different locations in northwestern and northern Iran from bark and soil samples. The new genus was described and illustrated based upon morphological and molecular characteristics. Pauronemoides n. gen. belongs to the family Paurodontidae and is characterised by the medium-sized body, asymmetrical knobs in stylet base, stem-like extension into intestine, post-vulval uterine sac (PUS) absent or rudimentary, different tail tip shape between sexes, and bursa enveloping tail or reaching to the tail end. The type species, Pauronemoides siddiqii n. gen., n. sp., is mainly characterised by 752-1281 μ m body length in females and 660-1085 μ m in males, six equally-sized lips, stylet 9-11 μ m long with asymmetrical knobs, six incisures in lateral fields forming five bands, three of which (two outers and one central) are wider, and variably lengthened stem-like extension projecting into the intestine. Vulva situated posteriorly (V = 87.7-91.7%), PUS absent. Conical tail with widely rounded end, having a small mucron at tip in females, males with conical tail ending to a narrower tip and bursa enveloping tail completely. The type species of the new genus was compared with all known species of the genera Prothallonema , Paurodontus , Paurodontoides and Paurodontella. Pauronemoides siddiqii n. gen., n. sp. resembles Prothallonema macrocellum and P. mucronatum by having the bulb extension penetrating into the intestine, dimorphism in tail shape of both sexes and bursa enveloping tail, and Paurodontella iranica by tail shape dimorphism between sexes and bursa ending near tail tip. Therefore, the above-mentioned species are transferred to the new genus as Pauronemoides macrocellus n. gen., n. comb. (= Prothallonema macrocellum), P. mucronatus n. gen., n. comb. (= Prothallonema mucronatum) and P. iranicus n. gen., n. comb. (= Paurodontella iranica). In addition to morphological comparisons, molecular phylogenetic analyses were performed using two sequences of small subunit (SSU), and three partial sequences of D2-D3 expansion segments of the large subunit (LSU) rDNA, and the resulting topologies were discussed. [ABSTRACT FROM AUTHOR]

Summary: A new species of Ektaphelenchinae was recovered from the bark of a dead date palm (Phoenix dactylifera) tree, and from a soil sample collected from the rhizosphere of gramineous grasses in Iraq and Iran, respectively. It was assigned to the genus Ektaphelenchus mainly by the lack of a functional anus and rectum, and having a conical posterior body end (tail) in female, not ending to a filiform tip, and males lacking a bursa. The recovered populations were described based on morphological and molecular data. Ektaphelenchus phoenicis n. sp. is characterised by 346-441 μ m long females, having three lines in lateral field, a 12.3-15.8 μ m long stylet with wide lumen lacking basal knobs or swellings, high lip region separated from the rest of body by a depression, metacorpus elliptical with refractive valve plates almost in the middle to slightly posterior, excretory pore posterior to metacorpus, postvulval uterine sac (PUS) 9.3-14.8 μ m long, usually containing sperm, posterior body end (tail) with ventrally bent distal end, males common in population with seven precloacal + cloacal + caudal papillae and slightly elevated cloacal lips under SEM, appearing as a differentiated flap-like structure under LM. The new species was morphologically compared with typologically similar species of Ektaphelenchus with a similar body size, namely: E. golestanicus , E. oleae and E. taiwanensis ; a similar female posterior body end, namely: E. cupressi , E. kanzakii , E. prolobos and E. riograndensis ; and E. goffarti having a similar postcloacal structure. The phylogenetic relationships of the new species with other relevant genera and species were reconstructed using near full length sequences of small and D2-D3 expansion segments of large subunit (SSU and LSU D2-D3) rDNA. In both inferred phylogenies, the newly generated sequences of Ektaphelenchus phoenicis n. sp. occupied a placement inside a maximally supported clade including sequences of three genera Ektaphelenchus , Ektaphelenchoides and Devibursaphelenchus. [ABSTRACT FROM AUTHOR]