74 results on '"Pediaditakis P"'
Search Results
2. A microengineered Brain-Chip to model neuroinflammation in humans
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Iosif Pediaditakis, Konstantia R. Kodella, Dimitris V. Manatakis, Christopher Y. Le, Sonalee Barthakur, Alexander Sorets, Achille Gravanis, Lorna Ewart, Lee L. Rubin, Elias S. Manolakos, Christopher D. Hinojosa, and Katia Karalis
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Molecular neuroscience ,Cellular neuroscience ,Biomedical engineering ,Science - Abstract
Summary: Species differences in brain and blood–brain barrier (BBB) biology hamper the translation of findings from animal models to humans, impeding the development of therapeutics for brain diseases. Here, we present a human organotypic microphysiological system (MPS) that includes endothelial-like cells, pericytes, glia, and cortical neurons and maintains BBB permeability at in vivo relevant levels. This human Brain-Chip engineered to recapitulate critical aspects of the complex interactions that mediate neuroinflammation and demonstrates significant improvements in clinical mimicry compared to previously reported similar MPS. In comparison to Transwell culture, the transcriptomic profiling of the Brain-Chip displayed significantly advanced similarity to the human adult cortex and enrichment in key neurobiological pathways. Exposure to TNF-α recreated the anticipated inflammatory environment shown by glia activation, increased release of proinflammatory cytokines, and compromised barrier permeability. We report the development of a robust brain MPS for mechanistic understanding of cell-cell interactions and BBB function during neuroinflammation.
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- 2022
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3. Aldh1l2 knockout mouse metabolomics links the loss of the mitochondrial folate enzyme to deregulation of a lipid metabolism observed in rare human disorder
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Natalia I. Krupenko, Jaspreet Sharma, Peter Pediaditakis, Kristi L. Helke, Madeline S. Hall, Xiuxia Du, Susan Sumner, and Sergey A. Krupenko
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ALDH1L2 ,Folate metabolism ,Knockout mouse model ,Metabolomics ,NADPH ,Oxidative stress ,Medicine ,Genetics ,QH426-470 - Abstract
Abstract Background Mitochondrial folate enzyme ALDH1L2 (aldehyde dehydrogenase 1 family member L2) converts 10-formyltetrahydrofolate to tetrahydrofolate and CO2 simultaneously producing NADPH. We have recently reported that the lack of the enzyme due to compound heterozygous mutations was associated with neuro-ichthyotic syndrome in a male patient. Here, we address the role of ALDH1L2 in cellular metabolism and highlight the mechanism by which the enzyme regulates lipid oxidation. Methods We generated Aldh1l2 knockout (KO) mouse model, characterized its phenotype, tissue histology, and levels of reduced folate pools and applied untargeted metabolomics to determine metabolic changes in the liver, pancreas, and plasma caused by the enzyme loss. We have also used NanoString Mouse Inflammation V2 Code Set to analyze inflammatory gene expression and evaluate the role of ALDH1L2 in the regulation of inflammatory pathways. Results Both male and female Aldh1l2 KO mice were viable and did not show an apparent phenotype. However, H&E and Oil Red O staining revealed the accumulation of lipid vesicles localized between the central veins and portal triads in the liver of Aldh1l2 -/- male mice indicating abnormal lipid metabolism. The metabolomic analysis showed vastly changed metabotypes in the liver and plasma in these mice suggesting channeling of fatty acids away from β-oxidation. Specifically, drastically increased plasma acylcarnitine and acylglycine conjugates were indicative of impaired β-oxidation in the liver. Our metabolomics data further showed that mechanistically, the regulation of lipid metabolism by ALDH1L2 is linked to coenzyme A biosynthesis through the following steps. ALDH1L2 enables sufficient NADPH production in mitochondria to maintain high levels of glutathione, which in turn is required to support high levels of cysteine, the coenzyme A precursor. As the final outcome, the deregulation of lipid metabolism due to ALDH1L2 loss led to decreased ATP levels in mitochondria. Conclusions The ALDH1L2 function is important for CoA-dependent pathways including β-oxidation, TCA cycle, and bile acid biosynthesis. The role of ALDH1L2 in the lipid metabolism explains why the loss of this enzyme is associated with neuro-cutaneous diseases. On a broader scale, our study links folate metabolism to the regulation of lipid homeostasis and the energy balance in the cell.
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- 2020
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4. Mutations in DDX3X Are a Common Cause of Unexplained Intellectual Disability with Gender-Specific Effects on Wnt Signaling
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Blok, Lot Snijders, Madsen, Erik, Juusola, Jane, Gilissen, Christian, Baralle, Diana, Reijnders, Margot RF, Venselaar, Hanka, Helsmoortel, Céline, Cho, Megan T, Hoischen, Alexander, Vissers, Lisenka ELM, Koemans, Tom S, Wissink-Lindhout, Willemijn, Eichler, Evan E, Romano, Corrado, Van Esch, Hilde, Stumpel, Connie, Vreeburg, Maaike, Smeets, Eric, Oberndorff, Karin, van Bon, Bregje WM, Shaw, Marie, Gecz, Jozef, Haan, Eric, Bienek, Melanie, Jensen, Corinna, Loeys, Bart L, Van Dijck, Anke, Innes, A Micheil, Racher, Hilary, Vermeer, Sascha, Di Donato, Nataliya, Rump, Andreas, Tatton-Brown, Katrina, Parker, Michael J, Henderson, Alex, Lynch, Sally A, Fryer, Alan, Ross, Alison, Vasudevan, Pradeep, Kini, Usha, Newbury-Ecob, Ruth, Chandler, Kate, Male, Alison, Study, the DDD, Dijkstra, Sybe, Schieving, Jolanda, Giltay, Jacques, van Gassen, Koen LI, Schuurs-Hoeijmakers, Janneke, Tan, Perciliz L, Pediaditakis, Igor, Haas, Stefan A, Retterer, Kyle, Reed, Patrick, Monaghan, Kristin G, Haverfield, Eden, Natowicz, Marvin, Myers, Angela, Kruer, Michael C, Stein, Quinn, Strauss, Kevin A, Brigatti, Karlla W, Keating, Katherine, Burton, Barbara K, Kim, Katherine H, Charrow, Joel, Norman, Jennifer, Foster-Barber, Audrey, Kline, Antonie D, Kimball, Amy, Zackai, Elaine, Harr, Margaret, Fox, Joyce, McLaughlin, Julie, Lindstrom, Kristin, Haude, Katrina M, van Roozendaal, Kees, Brunner, Han, Chung, Wendy K, Kooy, R Frank, Pfundt, Rolph, Kalscheuer, Vera, Mehta, Sarju G, Katsanis, Nicholas, and Kleefstra, Tjitske
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Biological Sciences ,Bioinformatics and Computational Biology ,Genetics ,Intellectual and Developmental Disabilities (IDD) ,Human Genome ,Clinical Research ,Brain Disorders ,Aetiology ,2.1 Biological and endogenous factors ,Amino Acid Substitution ,Animals ,Base Sequence ,DEAD-box RNA Helicases ,Embryo ,Nonmammalian ,Exome ,Female ,Gene Dosage ,Humans ,Intellectual Disability ,Male ,Molecular Sequence Data ,Mutation ,Missense ,Phenotype ,Sequence Analysis ,DNA ,Sex Characteristics ,Wnt Signaling Pathway ,Zebrafish ,DDD Study ,Medical and Health Sciences ,Genetics & Heredity ,Biological sciences ,Biomedical and clinical sciences ,Health sciences - Abstract
Intellectual disability (ID) affects approximately 1%-3% of humans with a gender bias toward males. Previous studies have identified mutations in more than 100 genes on the X chromosome in males with ID, but there is less evidence for de novo mutations on the X chromosome causing ID in females. In this study we present 35 unique deleterious de novo mutations in DDX3X identified by whole exome sequencing in 38 females with ID and various other features including hypotonia, movement disorders, behavior problems, corpus callosum hypoplasia, and epilepsy. Based on our findings, mutations in DDX3X are one of the more common causes of ID, accounting for 1%-3% of unexplained ID in females. Although no de novo DDX3X mutations were identified in males, we present three families with segregating missense mutations in DDX3X, suggestive of an X-linked recessive inheritance pattern. In these families, all males with the DDX3X variant had ID, whereas carrier females were unaffected. To explore the pathogenic mechanisms accounting for the differences in disease transmission and phenotype between affected females and affected males with DDX3X missense variants, we used canonical Wnt defects in zebrafish as a surrogate measure of DDX3X function in vivo. We demonstrate a consistent loss-of-function effect of all tested de novo mutations on the Wnt pathway, and we further show a differential effect by gender. The differential activity possibly reflects a dose-dependent effect of DDX3X expression in the context of functional mosaic females versus one-copy males, which reflects the complex biological nature of DDX3X mutations.
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- 2015
5. Modeling alpha-synuclein pathology in a human brain-chip to assess blood-brain barrier disruption
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Pediaditakis, Iosif, Kodella, Konstantia R., Manatakis, Dimitris V., Le, Christopher Y., Hinojosa, Chris D., Tien-Street, William, Manolakos, Elias S., Vekrellis, Kostas, Hamilton, Geraldine A., Ewart, Lorna, Rubin, Lee L., and Karalis, Katia
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- 2021
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6. Aldh1l2 knockout mouse metabolomics links the loss of the mitochondrial folate enzyme to deregulation of a lipid metabolism observed in rare human disorder
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Krupenko, Natalia I., Sharma, Jaspreet, Pediaditakis, Peter, Helke, Kristi L., Hall, Madeline S., Du, Xiuxia, Sumner, Susan, and Krupenko, Sergey A.
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- 2020
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7. Cytosolic 10-formyltetrahydrofolate dehydrogenase regulates glycine metabolism in mouse liver
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Krupenko, Natalia I., Sharma, Jaspreet, Pediaditakis, Peter, Fekry, Baharan, Helke, Kristi L., Du, Xiuxia, Sumner, Susan, and Krupenko, Sergey A.
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- 2019
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8. Deleterious mutations in ALDH1L2 suggest a novel cause for neuro-ichthyotic syndrome
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Sarret, Catherine, Ashkavand, Zahra, Paules, Evan, Dorboz, Imen, Pediaditakis, Peter, Sumner, Susan, Eymard-Pierre, Eléonore, Francannet, Christine, Krupenko, Natalia I., Boespflug-Tanguy, Odile, and Krupenko, Sergey A.
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- 2019
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9. CHIP E3 ligase mediates proteasomal degradation of the proliferation regulatory protein ALDH1L1 during the transition of NIH3T3 fibroblasts from G0/G1 to S-phase.
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Qasim A Khan, Peter Pediaditakis, Yuryi Malakhau, Amin Esmaeilniakooshkghazi, Zahra Ashkavand, Valentin Sereda, Natalia I Krupenko, and Sergey A Krupenko
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Medicine ,Science - Abstract
ALDH1L1 is a folate-metabolizing enzyme abundant in liver and several other tissues. In human cancers and cell lines derived from malignant tumors, the ALDH1L1 gene is commonly silenced through the promoter methylation. It was suggested that ALDH1L1 limits proliferation capacity of the cell and thus functions as putative tumor suppressor. In contrast to cancer cells, mouse cell lines NIH3T3 and AML12 do express the ALDH1L1 protein. In the present study, we show that the levels of ALDH1L1 in these cell lines fluctuate throughout the cell cycle. During S-phase, ALDH1L1 is markedly down regulated at the protein level. As the cell cultures become confluent and cells experience increased contact inhibition, ALDH1L1 accumulates in the cells. In agreement with this finding, NIH3T3 cells arrested in G1/S-phase by a thymidine block completely lose the ALDH1L1 protein. Treatment with the proteasome inhibitor MG-132 prevents such loss in proliferating NIH3T3 cells, suggesting the proteasomal degradation of the ALDH1L1 protein. The co-localization of ALDH1L1 with proteasomes, demonstrated by confocal microscopy, supports this mechanism. We further show that ALDH1L1 interacts with the chaperone-dependent E3 ligase CHIP, which plays a key role in the ALDH1L1 ubiquitination and degradation. In NIH3T3 cells, silencing of CHIP by siRNA halts, while transient expression of CHIP promotes, the ALDH1L1 loss. The downregulation of ALDH1L1 is associated with the accumulation of the ALDH1L1 substrate 10-formyltetrahydrofolate, which is required for de novo purine biosynthesis, a key pathway activated in S-phase. Overall, our data indicate that CHIP-mediated proteasomal degradation of ALDH1L1 facilitates cellular proliferation.
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- 2018
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10. Single molecule tracking reveals spatio-temporal dynamics of bacterial DNA repair centres
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Rösch, Thomas C., Altenburger, Stephan, Oviedo-Bocanegra, Luis, Pediaditakis, Miriam, Najjar, Nina El, Fritz, Georg, and Graumann, Peter L.
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- 2018
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11. Genetic Dissection of Neurotrophin Signaling through the p75 Neurotrophin Receptor
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Ioannis Charalampopoulos, Annalisa Vicario, Iosif Pediaditakis, Achille Gravanis, Anastasia Simi, and Carlos F. Ibáñez
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Biology (General) ,QH301-705.5 - Abstract
Structural determinants underlying signaling specificity in the tumor necrosis factor receptor superfamily (TNFRSF) are poorly characterized, and it is unclear whether different signaling outputs can be genetically dissociated. The p75 neurotrophin receptor (p75NTR), also known as TNFRSF16, is a key regulator of trophic and injury responses in the nervous system. Here, we describe a genetic approach for dissecting p75NTR signaling and deciphering its underlying logic. Structural determinants important for regulation of cell death, NF-κB, and RhoA pathways were identified in the p75NTR death domain (DD). Proapoptotic and prosurvival pathways mapped onto nonoverlapping epitopes, demonstrating that different signaling outputs can be genetically separated in p75NTR. Dissociation of c-Jun kinase (JNK) and caspase-3 activities indicated that JNK is necessary but not sufficient for p75NTR-mediated cell death. RIP2 recruitment and RhoGDI release were mechanistically linked, indicating that competition for DD binding underlies crosstalk between NF-κB and RhoA pathways in p75NTR signaling. These results provide insights into the logic of p75NTR signaling and pave the way for a genetic dissection of p75NTR function and physiology.
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- 2012
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12. A Global Look at Time
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Anna Sircova, Fons J. R. van de Vijver, Evgeny Osin, Taciano L. Milfont, Nicolas Fieulaine, Altinay Kislali-Erginbilgic, Philip G. Zimbardo, Slimane Djarallah, Mohamed Seghir Chorfi, Umbelina do Rego Leite, Hui Lin, Houchao Lv, Tomislav Bunjevac, Tena Tomaš, Jasmina Punek, Anica Vrlec, Jelena Matić, Marko Bokulić, Martina Klicperová-Baker, Jaroslav Koštʹ ál, Riin Seema, Arno Baltin, Themistoklis Apostolidis, Daphne Pediaditakis, Fay Griva, Fotios Anagnostopoulos, Nurit Carmi, Marina Goroshit, Martina Peri, Yumi Shimojima, Koichi Sato, Keita Ochi, Antanas Kairys, Audrone Liniauskaite, Víctor Corral-Verdugo, Aneta Przepiorka, Agata Blachnio, Victor E. C. Ortuño, Vítor Gamboa, Olga Mitina, Nadezhda Semyenova, Valentina Gerasimova, Tatiana Rawski (Nepryakho), Ekaterina Kuleshova, Natalia Polskaya, Nikolaj Tulinov, Isabella Romanko, Yulia Semina, Ekaterina Nikitina, Vera Yasnaya, Irina Davydova, Elsa Utyasheva, Irina Emeliyanova, Regina Ershova, Jasmina Nedeljkovic, Juan Francisco Díaz Morales, Maria Grazia Carelli, Britt Wiberg, Ilona Boniwell, P. Alex Linley, and John Nathan Boyd
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History of scholarship and learning. The humanities ,AZ20-999 ,Social Sciences - Abstract
In this article, we assess the structural equivalence of the Zimbardo Time Perspective Inventory (ZTPI) across 26 samples from 24 countries ( N = 12,200). The ZTPI is proven to be a valid and reliable index of individual differences in time perspective across five temporal categories: Past Negative, Past Positive, Present Fatalistic, Present Hedonistic, and Future. We obtained evidence for invariance of 36 items (out of 56) and also the five-factor structure of ZTPI across 23 countries. The short ZTPI scales are reliable for country-level analysis, whereas we recommend the use of the full scales for individual-level analysis. The short version of ZTPI will further promote integration of research in the time perspective domain in relation to many different psycho-social processes.
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- 2014
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13. Stable isotope resolved metabolomics of primary human hepatocytes reveals a stressed phenotype
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Winnike, Jason H., Pediaditakis, Peter, Wolak, Justyna E., McClelland, Randall E., Watkins, Paul B., and Macdonald, Jeffrey M.
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- 2012
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14. Role of voltage-dependent anion channels of the mitochondrial outer membrane in regulation of cell metabolism
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Holmuhamedov, E. L., Czerny, C., Lovelace, G., Beeson, C. C., Baker, T., Johnson, C. B., Pediaditakis, P., Teplova, V. V., Tikunov, A., MacDonald, J., and Lemasters, J. J.
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- 2010
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15. Neurosteroid dehydroepiandrosterone interacts with nerve growth factor (NGF) receptors, preventing neuronal apoptosis.
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Iakovos Lazaridis, Ioannis Charalampopoulos, Vassilia-Ismini Alexaki, Nicolaos Avlonitis, Iosif Pediaditakis, Paschalis Efstathopoulos, Theodora Calogeropoulou, Elias Castanas, and Achille Gravanis
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Biology (General) ,QH301-705.5 - Abstract
The neurosteroid dehydroepiandrosterone (DHEA), produced by neurons and glia, affects multiple processes in the brain, including neuronal survival and neurogenesis during development and in aging. We provide evidence that DHEA interacts with pro-survival TrkA and pro-death p75(NTR) membrane receptors of neurotrophin nerve growth factor (NGF), acting as a neurotrophic factor: (1) the anti-apoptotic effects of DHEA were reversed by siRNA against TrkA or by a specific TrkA inhibitor; (2) [(3)H]-DHEA binding assays showed that it bound to membranes isolated from HEK293 cells transfected with the cDNAs of TrkA and p75(NTR) receptors (K(D): 7.4 ± 1.75 nM and 5.6 ± 0.55 nM, respectively); (3) immobilized DHEA pulled down recombinant and naturally expressed TrkA and p75(NTR) receptors; (4) DHEA induced TrkA phosphorylation and NGF receptor-mediated signaling; Shc, Akt, and ERK1/2 kinases down-stream to TrkA receptors and TRAF6, RIP2, and RhoGDI interactors of p75(NTR) receptors; and (5) DHEA rescued from apoptosis TrkA receptor positive sensory neurons of dorsal root ganglia in NGF null embryos and compensated NGF in rescuing from apoptosis NGF receptor positive sympathetic neurons of embryonic superior cervical ganglia. Phylogenetic findings on the evolution of neurotrophins, their receptors, and CYP17, the enzyme responsible for DHEA biosynthesis, combined with our data support the hypothesis that DHEA served as a phylogenetically ancient neurotrophic factor.
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- 2011
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16. Considering the major mental disorders as clinical expressions of periodic pathological oscillations of the overall operating mode of brain function the article itself
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Pediaditakis Nichoalas
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Psychiatry ,RC435-571 - Published
- 2008
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17. Komplette Tumorremission mit Cisplatin-haltiger Chemotherapie beim Ovarial-Karzinom mit generalisierter abdominaler Metastasierung
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Pediaditakis, D., Zapf, R., Bartz, K. O., and Schander, K.
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- 1991
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18. Hepatopoietins A and B and hepatocyte growth
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Michalopoulos, George K., Zarnegar, Reza, Houck, Keith, and Pediaditakis, Peter
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- 1991
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19. Trophoblasttumor bei Interruptio
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Pediaditakis, D., Biermann, G., Bartz, K. O., and Schander, K.
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- 1993
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20. Langzeitverlauf bei metastasierendem Dottersacktumor
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Pediaditakis, D., Schander, K., and Bartz, K. O.
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- 1985
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21. Fibrinklebung bei vorzeitigem Blasensprung
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Zapf, R., Pediaditakis, D., and Schander, K.
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- 1989
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22. The processing and utilization of hepatocyte growth factor/scatter factor following partial hepatectomy in the rat
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Pediaditakis, P, primary
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- 2001
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23. An Emerging Natural History in the Development, Mechanisms and Worldwide Prevalence of Major Mental Disorders
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Pediaditakis, Nicholas
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Conciliating recent findings from molecular genetics, evolutionary biology, and clinical observations together point to new understandings regarding the mechanism, development and the persistent worldwide prevalence of major mental disorders (MMDs), which should be considered the result of an evolutionary downside trade off. Temperamental/trait variability, by facilitating choices for individual and group responses, confers robustness flexibility and resilience crucial to success of our species. Extreme temperamental variants, originating evolutionarily from the asocial aspect of human nature, also constitute the premorbid personality of the disorders. The latter create vulnerable individuals out of whom some will develop MMDs but at much higher rate to that of the general population. Significantly, similar temperamental “lopsidedness” enables many of these vulnerable individuals, if intelligent, tenacious, and curious, to be creative and contribute to our survival while some may also develop MMDs. All have a common neural-developmental origin and share characteristics in their clinical expression and pharmacological responses also expressed as mixed syndromes or alternating ones over time. Over-pruning of synaptic neurons may be considered the trigger of such occurrences or conversely, the failure to prevent them in spite of it. The symptoms of the major mental disorders are made up of antithetical substitutes as an expression of a disturbed over-all synchronizing property of brain function for all higher faculties previously unconsidered in their modeling. The concomitant presence of psychosis is a generic common occurrence.
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- 2016
24. Ovarialgravidität im 3. Trimenon
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Pediaditakis, D., Stille, A., Bartz, K. O., and Schander, K.
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- 1989
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25. Binary Boron-Rich Borides of Magnesium: Single-Crystal Investigations and Properties of MgB7 and the New Boride Mg∼5B44.
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Pediaditakis, Alexis, Schroeder, Melanie, Sagawe, Vanessa, Thilo Ludwig, and Harald Hillebrecht
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- 2010
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26. Qualifizierungsbedarf, Expertise und Rahmenbedingungen engagierter Lehrender in der Medizin in Deutschland.
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Huwendiek, Sören, Dern, Peter, Hahn, Eckhart G., Pediaditakis, Daphne, Tönshoff, Burkhard, and Nikendei, Christoph
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- 2008
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27. Considering the major mental disorders as clinical expressions of periodic pathological oscillations of the overall operating mode of brain function.
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Pediaditakis, Nicholas
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MENTAL illness ,SCHIZOPHRENIA ,BIPOLAR disorder ,ANXIETY ,NEURODEVELOPMENTAL treatment - Abstract
Summary: The consideration of the collective significance of the shared characteristics and overlaps in the clinical expression and pharmacological responses of the major mental disorders (namely, schizophrenia, bipolar disorders, obsessive compulsive disorder, anxieties/phobias, borderline syndrome and possibly others) supports the following: (1) These disorders have a common, initial neurodevelopmental origin. (2) They occur probabilistically on some of “at-risk” individuals whose pre-existing, extreme, temperamental/structural variance confers vulnerability for such occurrence. (3) Lastly, each of these syndromes can be considered as a clinical expression of oscillations (i.e., a switch to a pathologically ordered phase) of the overall, common operating mode of brain function. This mode based on a particular-for-our-brain, emergent quality of complexity, normally ensures the synchrony, coordination, subtlety and robust flexibility in the expression of the components of each of the various higher faculties of the brain, namely, the faculty of: (1) mood modulation; (2) coordination of feelings, thoughts and the responses to the external world; and (3) keeping constrain and limited but appropriate input of primitive drives. The conclusions in this paper have important ramifications in rethinking the current nosological procrustean flawed classification and the neurodevelopmental origin of the major mental disorders as well as the biases shown in selecting subjects for research. It also opens opportunities in the future development of novel, effective, economical and harmless therapies that will restore and maintain the normal phase of the operating mode of brain function. For example, the patient can wear an appropriate electronic device that sends a particular type of signal to the brain which will affect remission and prevent relapses without harm. We can thus avoid the use of pharmacological agents which have limited effectiveness, severe, long-term side-effects and financial burden to the patient. [Copyright &y& Elsevier]
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- 2006
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28. Effect of Oxygen Concentration on Viability and Metabolism in a Fluidized-Bed Bioartificial Liver Using 31P and 13C NMR Spectroscopy
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Jeffries, Rex E., Gamcsik, Michael P., Keshari, Kayvan R., Pediaditakis, Peter, Tikunov, Andrey P., Young, Gregory B., Lee, Haakil, Watkins, Paul B., and Macdonald, Jeffrey M.
- Abstract
Many oxygen mass-transfer modeling studies have been performed for various bioartificial liver (BAL) encapsulation types; yet, to our knowledge, there is no experimental study that directly and noninvasively measures viability and metabolism as a function of time and oxygen concentration. We report the effect of oxygen concentration on viability and metabolism in a fluidized-bed NMR-compatible BAL using in vivo31P and 13C NMR spectroscopy, respectively, by monitoring nucleotide triphosphate (NTP) and 13C-labeled nutrient metabolites, respectively. Fluidized-bed bioreactors eliminate the potential channeling that occurs with packed-bed bioreactors and serve as an ideal experimental model for homogeneous oxygen distribution. Hepatocytes were electrostatically encapsulated in alginate (avg. diameter, 500 μm; 3.5×107cells/mL) and perfused at 3 mL/min in a 9-cm (inner diameter) cylindrical glass NMR tube. Four oxygen treatments were tested and validated by an in-line oxygen electrode: (1) 95:5 oxygen:carbon dioxide (carbogen), (2) 75:20:5 nitrogen:oxygen:carbon dioxide, (3) 60:35:5 nitrogen:oxygen:carbon dioxide, and (4) 45:50:5 nitrogen:oxygen:carbon dioxide. With 20% oxygen, β-NTP steadily decreased until it was no longer detected at 11 h. The 35%, 50%, and 95% oxygen treatments resulted in steady β-NTP levels throughout the 28-h experimental period. For the 50% and 95% oxygen treatment, a 13C NMR time course (∼5 h) revealed 2-13C-glycine and 2-13C-glucose to be incorporated into [2-13C-glycyl]glutathione (GSH) and 2-13C-lactate, respectively, with 95% having a lower rate of lactate formation. 31P and 13C NMR spectroscopy is a noninvasive method for determining viability and metabolic rates. Modifying tissue-engineered devices to be NMR compatible is a relatively easy and inexpensive process depending on the bioreactor shape.
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- 2013
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29. Genetic Dissection of Neurotrophin Signaling through the p75 Neurotrophin Receptor
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Charalampopoulos, Ioannis, Vicario, Annalisa, Pediaditakis, Iosif, Gravanis, Achille, Simi, Anastasia, and Ibáñez, Carlos F.
- Abstract
Structural determinants underlying signaling specificity in the tumor necrosis factor receptor superfamily (TNFRSF) are poorly characterized, and it is unclear whether different signaling outputs can be genetically dissociated. The p75 neurotrophin receptor (p75NTR), also known as TNFRSF16, is a key regulator of trophic and injury responses in the nervous system. Here, we describe a genetic approach for dissecting p75NTRsignaling and deciphering its underlying logic. Structural determinants important for regulation of cell death, NF-κB, and RhoA pathways were identified in the p75NTRdeath domain (DD). Proapoptotic and prosurvival pathways mapped onto nonoverlapping epitopes, demonstrating that different signaling outputs can be genetically separated in p75NTR. Dissociation of c-Jun kinase (JNK) and caspase-3 activities indicated that JNK is necessary but not sufficient for p75NTR-mediated cell death. RIP2 recruitment and RhoGDI release were mechanistically linked, indicating that competition for DD binding underlies crosstalk between NF-κB and RhoA pathways in p75NTRsignaling. These results provide insights into the logic of p75NTRsignaling and pave the way for a genetic dissection of p75NTRfunction and physiology.
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- 2012
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30. Differential Mitogenic Effects of Single Chain Hepatocyte Growth Factor (HGF)/Scatter Factor and HGF/NK1 following Cleavage by Factor Xa*
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Pediaditakis, Peter, Monga, Satdarshan P.S., Mars, Wendy M., and Michalopoulos, George K.
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Hepatocyte growth factor/scatter factor (HGF/SF) is a multifunctional cytokine that is involved in many normal as well as pathological conditions. HGF/NK1, a splice variant of HGF/SF, has been reported to have either antagonistic or agonistic effects with regard to c-Met signaling depending on the cell type. In these experiments, we have determined that HGF/NK1 is a potent mitogen for rat hepatocytes in culture. Furthermore, we have found that coagulation factor Xa (fXa) is capable of cleaving HGF/NK1 and single chain HGF/SF (scHGF/SF). The products resulting from cleavage of HGF/NK1 or scHGF/SF by fXa appear as single bands under non-reducing conditions. The reaction products from the digestion of HGF/NK1 by fXa were separated under reducing conditions, and the cleavage site, as determined by N-terminal sequencing, was located C-terminal to arginine 134. Previous work established that the heparin-binding domain for HGF/SF is located in the N domain of HGF/SF. Additionally, the dimerization of the HGF/SF receptor (c-Met) by the ligand HGF/NK1 is facilitated by heparin and related sulfonated sugars on the cell surface, whereas heparin is not required for HGF/SF-mediated dimerization. Cleavage of single chain HGF/SF or HGF/NK1 by factor Xa does not alter the affinity of the respective molecules for heparin, but it did variably affect the associated mitogenic activity of these factors. The associated mitogenic activity of HGF/NK1 was reduced by more than 90%, whereas the mitogenic activity of scHGF/SF was unaffected. This suggests mandatory maintenance of a steric interaction of the N domain and the first kringle domain for HGF/NK1 to act as an agonist for rat hepatocyte growth but is not required by full-length HGF/SF.
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- 2002
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31. MITCHELL MEDAL LECTURE
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Yoshida, M., Michel, H., Sazanov, L.A., Yoshikawa, S., Barber, J., Lanyi, J.K., Balashov, S.P., Shuvalov, V.A., Yakovlev, A.G., Shkuropatova, T.A., Vasilieva, L.G., Shkuropatov, A.Y., Gast, P., Dunn, S.D., Del Rizzo, P.A., Bi, Y., Wood, K.S., Cipriano, D.J., Turina, P., Rebecchi, A., D'Alessandro, M., Anefors, S., Melandri, B.A., Walker, J.E., Iwata, S., Padan, E., Hunte, C., Screpanti, E., Venturi, M., Rimon, A., Palmieri, F., Cannon, B., Shabalina, I.G., Nedergaard, J., Ricquier, D., Brand, M.D., Zorov, D.B., Juhaszova, M., Sollott, S.J., Pamplona, R., Barja, G., Longo, V., Prolla, T.A., Halestrap, A.P., Yagi, T., Lemasters, J.J., Kim, I., Rodriquez-Enriquez, S., Lihua, H., Pediaditakis, P., Kim, J.-S., Vandenabeele, P., Zhivotovsky, B., Vakifahmetoglu, H., Olsson, M., Gogvadze, V., Orrenius, S., Scorrano, L., Karbowski, M., Norris, K., Youle, R., Krauskopf, A., Eriksson, O., Craigen, W.J., Forte, M.A., Bernardi, P., Rydstrom, J., Brandt, U., Brzezinski, P., Siletsky, S.A., Zaslavsky, D., Smirnova, I.A., Vygodina, T.V., Konstantinov, A.A., Teixeira, M., Verkhovsky, M.I., Cramer, W.A., Zhang, H., Heinnickel, M., Agalarov, R., Svensen, N., Krebs, C., Golbeck, J.H., Joliot, P., Joliot, A., Moebius, K., van Grondelle, R., Dempski, R., Friedrich, T., Bamberg, E., Zimmermann, B., Diez, M., Graeber, P., Boersch, M., Mueller, V., Drory, O., Nelson, N., Zharova, T.V., Vinogradov, A.D., Heberle, J., Brown, G.C., Borutaite, V., Duszynski, J., Koziel, R., Brutkowski, W., Szczepanowska, J., Zablocki, K., Vasilyev, V.B., Bass, M.G., Kustova, M.E., Sokolova, V.A., Grachyova, E.S., Kidgotko, O.V., Sorokin, A.V., Lee, D.-W., Ozturk, Y., Mamedova, A., Osyczka, A., Cooley, J.W., Daldal, F., Mulkidjanian, A.Y., Papa, S., Lorusso, M., Di Paola, M., Rich, P.R., Iwaki, M., Yaguzhinsky, L.S., Yurkov, V.I., Krasinskaya, I.P., Goglia, F., Lombardi, A., Moreno, M., Lanni, A., Jezek, P., Dlaskova, A., Smolkova, K., Santorova, J., Spacek, T., Janouchova, K., Zackova, M., Hlavata, L., Pohl, E.E., Porter, R.K., Sluse, F., Jarmuszkiewicz, W., Navet, R., Douete, P., Mathy, G., Sluse-Goffar, C., Boveris, A., Valdez, L.B., Zaobornyj, T., Bustamante, J., Giorgio, M., Grivennikova, V.G., Tyurina, Y.Y., Tyurin, V.A., Konduru, N.V., Basova, L., Potapovich, A.I., Bayir, H., Stoyanovsky, D., Fadeel, B., Shvedova, A.A., Kagan, V.E., Vyssokikh, M., Pustovidko, A., Simonyan, R., Skulachev, V.P., Anisimov, V.N., Popovich, I.G., Zabezhinski, M.A., Anisimov, S.V., Arutjunyan, A.V., Mylnikov, S.V., Vesnushkin, G.M., Vinogradova, I.A., Breitenbach, M., Heeren, G., Eberhard, N., Laun, P., Jarolim, S., Rinnerthaler, M., Madeo, F., Wissing, S., Burhans, W.C., Sainsard-Chanet, A., Lorin, S., Dufour, E., Trifunovic, A., Mott, J.L., Zhang, D., Chang, S.-W., Zassenhaus, H.P., Gottlieb, R.A., Hamacher-Brady, A., Brady, N., Giulivi, C., Mazzanti, R., Nicholls, D.G., Szewczyk, A., Chernyak, B.V., Izyumov, D.S., Lyamzaev, K.G., Pashkovskaya, A.A., Pletjushkina, O.Y., Antonenko, Yu.A., Sakharov, D.V., Wirtz, K.W.A., Feofanov, A.V., Sharonov, G.V., Chertkova, R.V., Dolgikh, D.A., Arseniev, A.S., Kirpichnikov, M.P., Severin, F.F., Sokolov, S., Pozniakovsky, A., Tsujimoto, Y., Aon, M.A., Cortassa, S., O'Rourke, B., Kuznetsov, A.V., Troppmair, J., Sucher, R., Hermann, M., Saks, V., Margreiter, R., Pletjushkina, O.Yu, Popova, E.N., Nepryahina, O.K., Ivanova, O.Yu, Domnina, L.V., van der Bliek, A.M., Griparic, L., Kanazawa, T., Zappaterra, M.D., Zorzano, A., Cossarizza, A., Garlid, K.D., Quinlan, C., Burton, J.R., Andrukhiv, A., Costa, A.D.T., Selak, M.A., Gottlieb, E., Hoek, J.B., Pastorino, J.G., Pepe, S., and Sheeran, F.
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- 2006
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32. Radial-arm maze deficits produced by colchicine administered into the area of the nucleus basalis are ameliorated by cholinergic agents
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Tilson, Hugh A., primary, McLamb, R.L., additional, Shaw, S., additional, Rogers, B.C., additional, Pediaditakis, P., additional, and Cook, L., additional
- Published
- 1988
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33. ChemInform Abstract: Single Crystal Investigations on ScB15and Sc2Cu1‐xB45— Two New Representatives of Boron‐Rich Borides Related to Tetragonal Boron II (t‐B192).
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Pediaditakis, Alexis, Haseloff, Stefanie, and Hillebrecht, Harald
- Abstract
Single crystals of ScB15are prepared from the elements in molten Ga (1600 °C, 40 h) and single crystals of Sc2Cu0.77B45are obtained from the elements in a Cu/Sc melt (1800 °C, 40 h).
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- 2011
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34. ChemInform Abstract: Binary Boron‐Rich Borides of Magnesium: Single‐Crystal Investigations and Properties of MgB7and the New Boride Mg≈5B44.
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Pediaditakis, Alexis, Schroeder, Melanie, Sagawe, Vanessa, Ludwig, Thilo, and Hillebrecht, Harald
- Abstract
Dark red single crystals of MgB7are obtained from a Cu/Mg/B melt (3:1:0.75; BN crucible in a sealed Ta tube, 1600 °C, 40 h).
- Published
- 2011
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35. Borreiche Boride als Modellstrukturen für die Elementmodifikationen des Bors
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Hillebrecht, Harald, Pediaditakis, Alexis, Schroeder, Melanie, Sagawe, Vanessa, and Ludwig, Thilo
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- 2010
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36. Hepatocyte growth factor induces wnt-1 independent nuclear translocation of beta-catenin through association of @b-catenin and c-met in rat hepatocytes
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Michalopoulos, G.K., Monga, S.P.S., Mars, W., Bell, A., Bowen, W.C., Mule, K., Nejak, K., and Pediaditakis, P.
- Published
- 2001
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37. Changes in Wnt/@b-catenin signaling during regulated growth in liver regeneration
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Michalopoulos, G.K., Monga, S.P.S., Pediaditakis, P., Stolz, D.B., and Mule, K.
- Published
- 2001
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38. Hepatocyte growth factor induces wnt-1 independent nuclear translocation of beta-catenin through association of β-catenin and c-met in rat hepatocytes
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Michalopoulos, George K., Monga, Satdarshan P.S., Mars, Wendy, Bell, Aaron, Bowen, William C., Mule, Karen, Nejak, Keri, and Pediaditakis, Peter
- Published
- 2001
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39. Knockout of Putative Tumor Suppressor Aldh1l1 in Mice Reprograms Metabolism to Accelerate Growth of Tumors in a Diethylnitrosamine (DEN) Model of Liver Carcinogenesis.
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Krupenko NI, Sharma J, Fogle HM, Pediaditakis P, Strickland KC, Du X, Helke KL, Sumner S, and Krupenko SA
- Abstract
Cytosolic 10-formyltetrahydrofolate dehydrogenase (ALDH1L1) is commonly downregulated in human cancers through promoter methylation. We proposed that ALDH1L1 loss promotes malignant tumor growth. Here, we investigated the effect of the Aldh1l1 mouse knockout ( Aldh1l1
-/- ) on hepatocellular carcinoma using a chemical carcinogenesis model. Fifteen-day-old male Aldh1l1 knockout mice and their wild-type littermate controls ( Aldh1l1+/+ ) were injected intraperitoneally with 20 μg/g body weight of DEN (diethylnitrosamine). Mice were sacrificed 10, 20, 28, and 36 weeks post-DEN injection, and livers were examined for tumor multiplicity and size. We observed that while tumor multiplicity did not differ between Aldh1l1-/- and Aldh1l1+/+ animals, larger tumors grew in Aldh1l1-/- compared to Aldh1l1+/+ mice at 28 and 36 weeks. Profound differences between Aldh1l1-/- and Aldh1l1+/+ mice in the expression of inflammation-related genes were seen at 10 and 20 weeks. Of note, large tumors from wild-type mice showed a strong decrease of ALDH1L1 protein at 36 weeks. Metabolomic analysis of liver tissues at 20 weeks showed stronger differences in Aldh1l1+/+ versus Aldh1l1-/- metabotypes than at 10 weeks, which underscores metabolic pathways that respond to DEN in an ALDH1L1-dependent manner. Our study indicates that Aldh1l1 knockout promoted liver tumor growth without affecting tumor initiation or multiplicity.- Published
- 2021
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40. CHIP E3 ligase mediates proteasomal degradation of the proliferation regulatory protein ALDH1L1 during the transition of NIH3T3 fibroblasts from G0/G1 to S-phase.
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Khan QA, Pediaditakis P, Malakhau Y, Esmaeilniakooshkghazi A, Ashkavand Z, Sereda V, Krupenko NI, and Krupenko SA
- Subjects
- Aldehyde Dehydrogenase 1 Family, Animals, Cell Proliferation, Mice, NIH 3T3 Cells, Proteolysis, G1 Phase, Isoenzymes metabolism, Proteasome Endopeptidase Complex metabolism, Resting Phase, Cell Cycle, Retinal Dehydrogenase metabolism, S Phase, Ubiquitin metabolism, Ubiquitin-Protein Ligases metabolism
- Abstract
ALDH1L1 is a folate-metabolizing enzyme abundant in liver and several other tissues. In human cancers and cell lines derived from malignant tumors, the ALDH1L1 gene is commonly silenced through the promoter methylation. It was suggested that ALDH1L1 limits proliferation capacity of the cell and thus functions as putative tumor suppressor. In contrast to cancer cells, mouse cell lines NIH3T3 and AML12 do express the ALDH1L1 protein. In the present study, we show that the levels of ALDH1L1 in these cell lines fluctuate throughout the cell cycle. During S-phase, ALDH1L1 is markedly down regulated at the protein level. As the cell cultures become confluent and cells experience increased contact inhibition, ALDH1L1 accumulates in the cells. In agreement with this finding, NIH3T3 cells arrested in G1/S-phase by a thymidine block completely lose the ALDH1L1 protein. Treatment with the proteasome inhibitor MG-132 prevents such loss in proliferating NIH3T3 cells, suggesting the proteasomal degradation of the ALDH1L1 protein. The co-localization of ALDH1L1 with proteasomes, demonstrated by confocal microscopy, supports this mechanism. We further show that ALDH1L1 interacts with the chaperone-dependent E3 ligase CHIP, which plays a key role in the ALDH1L1 ubiquitination and degradation. In NIH3T3 cells, silencing of CHIP by siRNA halts, while transient expression of CHIP promotes, the ALDH1L1 loss. The downregulation of ALDH1L1 is associated with the accumulation of the ALDH1L1 substrate 10-formyltetrahydrofolate, which is required for de novo purine biosynthesis, a key pathway activated in S-phase. Overall, our data indicate that CHIP-mediated proteasomal degradation of ALDH1L1 facilitates cellular proliferation., Competing Interests: The authors have declared that no competing interests exist.
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- 2018
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41. Effect of oxygen concentration on viability and metabolism in a fluidized-bed bioartificial liver using ³¹P and ¹³C NMR spectroscopy.
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Jeffries RE, Gamcsik MP, Keshari KR, Pediaditakis P, Tikunov AP, Young GB, Lee H, Watkins PB, and Macdonald JM
- Subjects
- Animals, Carbon Isotopes, Phosphorus Isotopes, Rats, Rats, Sprague-Dawley, Artificial Organs, Bioreactors, Liver metabolism, Magnetic Resonance Spectroscopy methods, Oxygen metabolism
- Abstract
Many oxygen mass-transfer modeling studies have been performed for various bioartificial liver (BAL) encapsulation types; yet, to our knowledge, there is no experimental study that directly and noninvasively measures viability and metabolism as a function of time and oxygen concentration. We report the effect of oxygen concentration on viability and metabolism in a fluidized-bed NMR-compatible BAL using in vivo ³¹P and ¹³C NMR spectroscopy, respectively, by monitoring nucleotide triphosphate (NTP) and ¹³C-labeled nutrient metabolites, respectively. Fluidized-bed bioreactors eliminate the potential channeling that occurs with packed-bed bioreactors and serve as an ideal experimental model for homogeneous oxygen distribution. Hepatocytes were electrostatically encapsulated in alginate (avg. diameter, 500 μm; 3.5×10⁷ cells/mL) and perfused at 3 mL/min in a 9-cm (inner diameter) cylindrical glass NMR tube. Four oxygen treatments were tested and validated by an in-line oxygen electrode: (1) 95:5 oxygen:carbon dioxide (carbogen), (2) 75:20:5 nitrogen:oxygen:carbon dioxide, (3) 60:35:5 nitrogen:oxygen:carbon dioxide, and (4) 45:50:5 nitrogen:oxygen:carbon dioxide. With 20% oxygen, β-NTP steadily decreased until it was no longer detected at 11 h. The 35%, 50%, and 95% oxygen treatments resulted in steady β-NTP levels throughout the 28-h experimental period. For the 50% and 95% oxygen treatment, a ¹³C NMR time course (∼5 h) revealed 2-¹³C-glycine and 2-¹³C-glucose to be incorporated into [2-¹³C-glycyl]glutathione (GSH) and 2-¹³C-lactate, respectively, with 95% having a lower rate of lactate formation. ³¹P and ¹³C NMR spectroscopy is a noninvasive method for determining viability and metabolic rates. Modifying tissue-engineered devices to be NMR compatible is a relatively easy and inexpensive process depending on the bioreactor shape.
- Published
- 2013
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42. ¹³C magnetic resonance spectroscopy detection of changes in serine isotopomers reflects changes in mitochondrial redox status.
- Author
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Johnson CB, Tikunov AP, Lee H, Wolak JE, Pediaditakis P, Romney DA, Holmuhamedov E, Gamcsik MP, and Macdonald JM
- Subjects
- Animals, Carbon Isotopes, Cells, Cultured, Hepatocytes ultrastructure, Male, Radiopharmaceuticals, Rats, Rats, Sprague-Dawley, Hepatocytes metabolism, Mitochondria, Liver metabolism, NAD analysis, Oxidation-Reduction, Serine analysis
- Abstract
The glycine cleavage system (GCS), the major pathway of glycine catabolism in liver, is found only in the mitochondria matrix and is regulated by the oxidized nicotinamide adenine dinucleotide (NAD(+) )/reduced nicotinamide adenine dinucleotide (NADH) ratio. In conjunction with serine hydroxymethyltransferase, glycine forms the 1 and 2 positions of serine, while the 3 position is formed exclusively by GCS. Therefore, we sought to exploit this pathway to show that quantitative measurements of serine isotopomers in liver can be used to monitor the NAD(+) /NADH ratio using (13) C NMR spectroscopy. Rat hepatocytes were treated with modulators of GCS activity followed by addition of 2-(13) C-glycine, and the changes in the proportions of newly synthesized serine isotopomers were compared to controls. Cysteamine, a competitive inhibitor of GCS, prevented formation of mitochondrial 3-(13) C-serine and 2,3-(13) C-serine isotopomers while reducing 2-(13) C-serine by 55%, demonstrating that ca. 20% of glycine-derived serine is produced in the cytosol. Glucagon, which activates GCS activity, and the mitochondrial uncoupler carbonyl cyanide-3-chlorophenylhydrazone both increased serine isotopomers, whereas rotenone, an inhibitor of complex I, had the opposite effect. These results demonstrate that (13) C magnetic resonance spectroscopy monitoring of the formation of serine isotopomers in isolated rat hepatocytes given 2-(13) C-glycine reflects the changes of mitochondrial redox status., (Copyright © 2011 Wiley Periodicals, Inc.)
- Published
- 2012
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43. Inhibition of the mitochondrial permeability transition by protein kinase A in rat liver mitochondria and hepatocytes.
- Author
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Pediaditakis P, Kim JS, He L, Zhang X, Graves LM, and Lemasters JJ
- Subjects
- Adenosine Triphosphate metabolism, Animals, Calcium metabolism, Catalytic Domain, Cell Death, Cells, Cultured, Enzyme Activation, Male, Mitochondrial Swelling, Phosphorylation, Rats, Rats, Sprague-Dawley, Reperfusion Injury metabolism, Reperfusion Injury pathology, Cell Membrane Permeability, Cyclic AMP-Dependent Protein Kinases metabolism, Hepatocytes metabolism, Mitochondria, Liver metabolism
- Abstract
NO and cGMP administered at reperfusion after ischaemia prevent injury to hepatocytes mediated by the MPT (mitochondrial permeability transition). To characterize further the mechanism of protection, the ability of hepatic cytosol in combination with cyclic nucleotides to delay onset of the calcium-induced MPT was evaluated in isolated rat liver mitochondria. Liver cytosol plus cGMP or cAMP dose-dependently inhibited the MPT, required ATP hydrolysis for inhibition and did not inhibit mitochondrial calcium uptake. Specific peptide inhibitors for PKA (protein kinase A), but not PKG (protein kinase G), abolished cytosol-induced inhibition of MPT onset. Activity assays showed a cGMP- and cAMP-stimulated protein kinase activity in liver cytosol that was completely inhibited by PKI, a PKA peptide inhibitor. Size-exclusion chromatography of liver cytosol produced a single peak of cGMP/cAMP-stimulated kinase activity with an estimated protein size of 180-220 kDa. This fraction was PKI-sensitive and delayed onset of the MPT. Incubation of active catalytic PKA subunit directly with mitochondria in the absence of cytosol and cyclic nucleotide also delayed MPT onset, and incubation with purified outer membranes led to phosphorylation of a major 31 kDa band. After ischaemia, administration at reperfusion of membrane-permeant cAMPs and cAMP-mobilizing glucagon prevented reperfusion injury to hepatocytes. In conclusion, PKA in liver cytosol activated by cGMP or cAMP acts directly on mitochondria to delay onset of the MPT and protect hepatocytes from cell death after ischaemia/reperfusion.
- Published
- 2010
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44. [The role of the voltage-dependent anion channels in the outer membrane of mitochondria in the regulation of cellular metabolism].
- Author
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Kholmukhamedov EL, Czerny C, Lovelace G, Beeson KC, Baker T, Johnson CB, Pediaditakis P, Teplova VV, Tikunov A, MacDonald J, and Lemasters JJ
- Subjects
- Animals, Cells, Cultured, Ethanol pharmacology, Hepatocytes metabolism, Ion Channel Gating, Mitochondria, Liver drug effects, Mitochondrial Membranes drug effects, Permeability, Rats, Rats, Sprague-Dawley, Urea metabolism, Mitochondria, Liver metabolism, Mitochondrial Membranes metabolism, Voltage-Dependent Anion Channels physiology
- Abstract
The role of the voltage-dependent anion channels (VDAC) harbored in the outer membrane of mitochondria in the regulation of cellular metabolism was investigated using an experimental model of ethanol toxicity in cultured hepatocytes. It was demonstrated that ethanol inhibits State 3 and uncoupled mitochondrial respirations, decreases the accessibility of mitochondrial adenylate kinase localized in the intermembrane space of mitochondria, and suppresses ureagenic respiration and synthesis of urea in cultured hepatocytes. Increasing the permeability of the outer mitochondrial membrane with closed VDAC with high concentrations of digitonin (> 80 microM), which creates pores in the membrane, allowing the alternative bypass of closed VDAC, and restores all reactions suppressed with ethanol. It is concluded that the effect of ethanol in hepatocytes leads to global loss of mitochondrial functions due to the closure of VDAC, which limits the free diffusion of metabolites into the intermembrane space of mitochondria. Our studies demonstrated that ethanol affects the main mitochondrial functions and revealed the role of VDAC channels in the outer mitochondrial membrane in the regulation of liver specific intracellular processes such as ureagenesis. The data obtained can be used for the development of pharmaceutical drugs that prevent the closure of VDAC in mitochondria of ethanol oxidizing liver, thus protecting liver tissue from the hepatotoxic action of alcohol.
- Published
- 2010
45. Closure of VDAC causes oxidative stress and accelerates the Ca(2+)-induced mitochondrial permeability transition in rat liver mitochondria.
- Author
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Tikunov A, Johnson CB, Pediaditakis P, Markevich N, Macdonald JM, Lemasters JJ, and Holmuhamedov E
- Subjects
- Animals, Antioxidants pharmacology, Butylated Hydroxytoluene pharmacology, Calcium Channels metabolism, Computer Simulation, Male, Mitochondrial Membranes metabolism, Models, Biological, Permeability, Rats, Rats, Sprague-Dawley, Superoxides metabolism, Thionucleotides pharmacology, Voltage-Dependent Anion Channels antagonists & inhibitors, Calcium metabolism, Mitochondria, Liver metabolism, Oxidative Stress, Voltage-Dependent Anion Channels metabolism
- Abstract
The electron transport chain of mitochondria is a major source of reactive oxygen species (ROS), which play a critical role in augmenting the Ca(2+)-induced mitochondrial permeability transition (MPT). Mitochondrial release of superoxide anions (O(2)(-)) from the intermembrane space (IMS) to the cytosol is mediated by voltage dependent anion channels (VDAC) in the outer membrane. Here, we examined whether closure of VDAC increases intramitochondrial oxidative stress by blocking efflux of O(2)(-) from the IMS and sensitizing to the Ca(2+)-induced MPT. Treatment of isolated rat liver mitochondria with 5microM G3139, an 18-mer phosphorothioate blocker of VDAC, accelerated onset of the MPT by 6.8+/-1.4min within a range of 100-250microM Ca(2+). G3139-mediated acceleration of the MPT was reversed by 20microM butylated hydroxytoluene, a water soluble antioxidant. Pre-treatment of mitochondria with G3139 also increased accumulation of O(2)(-) in mitochondria, as monitored by dihydroethidium fluorescence, and permeabilization of the mitochondrial outer membrane with digitonin reversed the effect of G3139 on O(2)(-) accumulation. Mathematical modeling of generation and turnover of O(2)(-) within the IMS indicated that closure of VDAC produces a 1.55-fold increase in the steady-state level of mitochondrial O(2)(-). In conclusion, closure of VDAC appears to impede the efflux of superoxide anions from the IMS, resulting in an increased steady-state level of O(2)(-), which causes an internal oxidative stress and sensitizes mitochondria toward the Ca(2+)-induced MPT., (Published by Elsevier Inc.)
- Published
- 2010
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46. Minocycline and N-methyl-4-isoleucine cyclosporin (NIM811) mitigate storage/reperfusion injury after rat liver transplantation through suppression of the mitochondrial permeability transition.
- Author
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Theruvath TP, Zhong Z, Pediaditakis P, Ramshesh VK, Currin RT, Tikunov A, Holmuhamedov E, and Lemasters JJ
- Subjects
- Adenosine Diphosphate metabolism, Alanine Transaminase blood, Animals, Anti-Bacterial Agents pharmacology, Apoptosis drug effects, Calcium metabolism, Cyclosporine pharmacology, Graft Survival drug effects, Liver drug effects, Liver pathology, Male, Minocycline pharmacology, Mitochondria drug effects, Mitochondria metabolism, Mitochondrial Diseases prevention & control, Mitochondrial Permeability Transition Pore, Necrosis prevention & control, Rats, Rats, Inbred Lew, Reperfusion Injury etiology, Tetracycline pharmacology, Anti-Bacterial Agents therapeutic use, Cyclosporine therapeutic use, Liver Transplantation adverse effects, Minocycline therapeutic use, Mitochondrial Membrane Transport Proteins antagonists & inhibitors, Reperfusion Injury prevention & control
- Abstract
Unlabelled: Graft failure after liver transplantation may involve mitochondrial dysfunction. We examined whether prevention of mitochondrial injury would improve graft function. Orthotopic rat liver transplantation was performed after 18 hours' cold storage in University of Wisconsin solution and treatment with vehicle, minocycline, tetracycline, or N-methyl-4-isoleucine cyclosporin (NIM811) of explants and recipients. Serum alanine aminotransferase (ALT), necrosis, and apoptosis were assessed 6 hours after implantation. Mitochondrial polarization and cell viability were assessed by intravital microscopy. Respiration and the mitochondrial permeability transition (MPT) were assessed in isolated rat liver mitochondria. After transplantation with vehicle or tetracycline, ALT increased to 5242 U/L and 4373 U/L, respectively. Minocycline and NIM811 treatment decreased ALT to 2374 U/L and 2159 U/L, respectively (P < 0.01). Necrosis and terminal deoxynucleotidyl transferase-mediated nick-end labeling (TUNEL) also decreased from 21.4% and 21 cells/field, respectively, after vehicle to 10.1% and 6 cells/field after minocycline and to 8.7% and 5.2 cells/field after NIM811 (P < 0.05). Additionally, minocycline decreased caspase-3 activity in graft homogenates (P < 0.05). Long-term graft survival was 27% and 33%, respectively, after vehicle and tetracycline treatment, which increased to 60% and 70% after minocycline and NIM811 (P < 0.05). In isolated mitochondria, minocycline and NIM811 but not tetracycline blocked the MPT. Minocycline blocked the MPT by decreasing mitochondrial Ca(2+) uptake, whereas NIM811 blocks by interaction with cyclophilin D. Intravital microscopy showed that minocycline and NIM811 preserved mitochondrial polarization and cell viability after transplantation (P < 0.05)., Conclusion: Minocycline and NIM811 attenuated graft injury after rat liver transplantation and improved graft survival. Minocycline and/or NIM811 might be useful clinically in hepatic surgery and transplantation.
- Published
- 2008
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47. Inhibition of mitochondrial respiration as a source of adaphostin-induced reactive oxygen species and cytotoxicity.
- Author
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Le SB, Hailer MK, Buhrow S, Wang Q, Flatten K, Pediaditakis P, Bible KC, Lewis LD, Sausville EA, Pang YP, Ames MM, Lemasters JJ, Holmuhamedov EL, and Kaufmann SH
- Subjects
- Adamantane pharmacology, Antineoplastic Agents pharmacology, Cell Line, Tumor, Cell Respiration, DNA-Formamidopyrimidine Glycosylase metabolism, Electron Transport, Humans, K562 Cells, Membrane Potentials, Oxidation-Reduction, Oxygen Consumption, Peroxides metabolism, Superoxides metabolism, Adamantane analogs & derivatives, Hydroquinones pharmacology, Mitochondria metabolism, Reactive Oxygen Species
- Abstract
Adaphostin is a dihydroquinone derivative that is undergoing extensive preclinical testing as a potential anticancer drug. Previous studies have suggested that the generation of reactive oxygen species (ROS) plays a critical role in the cytotoxicity of this agent. In this study, we investigated the source of these ROS. Consistent with the known chemical properties of dihydroquinones, adaphostin simultaneously underwent oxidation to the corresponding quinone and generated ROS under aqueous conditions. Interestingly, however, this quinone was not detected in intact cells. Instead, high performance liquid chromatography demonstrated that adaphostin was concentrated by up to 300-fold in cells relative to the extracellular medium and that the highest concentration of adaphostin (3000-fold over extracellular concentrations) was detected in mitochondria. Consistent with a mitochondrial site for adaphostin action, adaphostin-induced ROS production was diminished by >75% in MOLT-4 rho(0) cells, which lack mitochondrial electron transport, relative to parental MOLT-4 cells. In addition, inhibition of oxygen consumption was observed when intact cells were treated with adaphostin. Loading of isolated mitochondria to equivalent adaphostin concentrations caused inhibition of uncoupled oxygen consumption in mitochondria incubated with the complex I substrates pyruvate and malate or the complex II substrate succinate. Further analysis demonstrated that adaphostin had no effect on pyruvate or succinate dehydrogenase activity. Instead, adaphostin inhibited reduced decylubiquinone-induced cytochrome c reduction, identifying complex III as the site of inhibition by this agent. Moreover, adaphostin enhanced the production of ROS by succinate-charged mitochondria. Collectively, these observations demonstrate that mitochondrial respiration rather than direct redox cycling of the hydroquinone moiety is a source of adaphostin-induced ROS and identify complex III as a potential target for antineoplastic agents.
- Published
- 2007
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48. Isolated mouse liver mitochondria are devoid of glucokinase.
- Author
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Bustamante E, Pediaditakis P, He L, and Lemasters JJ
- Subjects
- Animals, Apoptosis physiology, Blotting, Western, Cytosol enzymology, Mice, Glucokinase analysis, Mitochondria, Liver enzymology
- Abstract
Glucokinase is a hexokinase isoform with low affinity for glucose that has previously been identified as a cytosolic enzyme. A recent report claims that glucokinase physically associates with liver mitochondria to form a multi-protein complex that may be physiologically important in apoptotic signaling [N.N. Danial, C.F. Gramm, L. Scorrano, C.Y. Zhang, S. Krauss, A.M. Ranger, S.R. Datta, M.E. Greenberg, L.J. Licklider, B.B. Lowell, S.P. Gygi, S.J. Korsmeyer, Nature 424 (2003) 952-956]. Here, we re-examined the association of glucokinase with isolated mouse liver mitochondria. When glucokinase activity was measured by coupled enzyme assay, robust activity was present in whole liver homogenates and their 9500 g supernatants (cytosol), but activity in the purified mitochondrial fraction was below detection (<0.2% of homogenate). Furthermore, addition of 45 mM glucose in the presence of ATP did not increase mitochondrial respiration, indicating the absence of ADP formation by glucokinase or any other hexokinase isoform. Immunoblots of liver homogenates and cytosol revealed strong glucokinase bands, but no immunoreactivity was detected in mitochondria. In conclusion, mouse liver mitochondria lack measurable glucokinase. Thus, functional linkage of glucokinase to mitochondrial metabolism and apoptotic signaling is unlikely to be mediated by the physical association of glucokinase with mitochondria.
- Published
- 2005
- Full Text
- View/download PDF
49. Nitric oxide: a signaling molecule against mitochondrial permeability transition- and pH-dependent cell death after reperfusion.
- Author
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Kim JS, Ohshima S, Pediaditakis P, and Lemasters JJ
- Subjects
- Animals, Hydrogen-Ion Concentration, Apoptosis drug effects, Mitochondria metabolism, Nitric Oxide metabolism, Reperfusion Injury, Signal Transduction
- Abstract
Reperfusion of ischemic tissue can precipitate cell death. Much of this cell killing is related to the return of physiological pH after the tissue acidosis of ischemia. The mitochondrial permeability transition (MPT) is a key mechanism contributing to this pH-dependent reperfusion injury in hepatocytes, myocytes, and other cell types. When ATP depletion occurs after the MPT, necrotic cell death ensues. If ATP levels are maintained, at least in part, the MPT initiates apoptosis caused by mitochondrial swelling and release of cytochrome c and other proapoptotic factors. Cyclosporin A and acidotic pH inhibit opening of permeability transition pores and protect cells against oxidative stress and ischemia/reperfusion injury, whereas Ca(2+), mitochondrial reactive oxygen species, and pH above 7 promote mitochondrial inner membrane permeabilization. Reperfusion with nitric oxide (NO) donors also blocks the MPT via a guanylyl cyclase and protein kinase G-dependent signaling pathway, which in turn prevents reperfusion-induced cell killing. In isolated mitochondria, a combination of cGMP, cytosolic extract, and ATP blocks the Ca(2+)-induced MPT, an effect that is reversed by protein kinase G inhibition. Thus, NO prevents pH-dependent cell killing after ischemia/reperfusion by a guanylyl cyclase/cGMP/protein kinase G signaling cascade that blocks the MPT.
- Published
- 2004
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50. Nitric oxide protects rat hepatocytes against reperfusion injury mediated by the mitochondrial permeability transition.
- Author
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Kim JS, Ohshima S, Pediaditakis P, and Lemasters JJ
- Subjects
- Adenosine Triphosphate physiology, Animals, Cells, Cultured, Cyclic GMP physiology, Guanylate Cyclase physiology, Nitric Oxide Donors pharmacology, Permeability, Rats, S-Nitroso-N-Acetylpenicillamine pharmacology, Hepatocytes drug effects, Mitochondria, Liver physiology, Nitric Oxide pharmacology, Reperfusion Injury prevention & control
- Abstract
We investigated the effects of nitric oxide (NO) on hepatocellular killing after simulated ischemia/reperfusion and characterized signaling factors triggering cytoprotection by NO. Cultured rat hepatocytes were incubated in anoxic Krebs-Ringer-HEPES buffer at pH 6.2 for 4 hours and reoxygenated at pH 7.4 for 2 hours. During reoxygenation, some hepatocytes were exposed to combinations of NO donors (S-nitroso-N-acetylpenicillamine [SNAP] and others), a cGMP analogue (8-bromoguanosine-3,5-cGMP [8-Br-cGMP]), and a cGMP-dependent protein kinase inhibitor (KT5823). Cell viability was determined by way of propidium iodide fluorometry. Inner membrane permeabilization and mitochondrial depolarization were monitored by confocal microscopy. SNAP, but not oxidized SNAP, increased cGMP during reperfusion and decreased cell killing. Other NO donors and 8-Br-cGMP also prevented cell killing. Both guanylyl cyclase and cGMP-dependent kinase inhibition blocked the cytoprotection of NO. However, 5-hydroxydecanoate and diazoxide- mitochondrial K(ATP) channel modulators-did not affect NO-dependent cytoprotection or reperfusion injury. During reoxygenation, confocal microscopy showed mitochondrial repolarization, followed by depolarization, inner membrane permeabilization, and cell death. In the presence of either SNAP or 8-Br-cGMP, mitochondrial repolarization was sustained after reperfusion preventing inner membrane permeabilization and cell death. In isolated rat liver mitochondria, a cGMP analogue in the presence of a cytosolic extract and adenosine triphosphate blocked the Ca(2+)-induced mitochondrial permeability transition (MPT), an effect that was reversed by KT5823. In conclusion, NO prevents MPT-dependent necrotic killing of ischemic hepatocytes after reperfusion through a guanylyl cyclase and cGMP-dependent kinase signaling pathway, events that may represent the target of NO cytoprotection in preconditioning.
- Published
- 2004
- Full Text
- View/download PDF
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