25 results on '"Pauvolid-Correa, A"'
Number of results to display per page
Search Results
2. Post-acute COVID-19 syndrome after reinfection and vaccine breakthrough by the SARS-CoV-2 Gamma variant in Brazil
- Author
-
Penetra, Stephanie LS, da Silva, Michele FB, Resende, Paola, Pina-Costa, Anielle, Santos, Heloisa FP, Guaraldo, Lusiele, Calvet, Guilherme A, Ogrzewalska, Maria, Arantes, Ighor, Zukeram, Ketiuce, de Araújo, Mia F, Lima, Ana Beatriz Machado, Lopes, Renata Serrano, Lira-Silva, Larissa R, Moraes, Isabella V, Wakimoto, Mayumi D, Fuller, Trevon L, Gabaglia, Claudia Raja, Espíndola, Otávio M, Bonaldo, Myrna C, Daniel-Ribeiro, Cláudio Tadeu, Whitworth, Jimmy, Smith, Chris, Nielsen-Saines, Karin, Pauvolid-Correa, Alex, Siqueira, Marilda M, and Brasil, Patricia
- Subjects
Medical Microbiology ,Biomedical and Clinical Sciences ,Immunology ,Infectious Diseases ,Emerging Infectious Diseases ,Prevention ,Lung ,Vaccine Related ,Pneumonia ,Immunization ,Rare Diseases ,Biodefense ,Infection ,Good Health and Well Being ,Brazil ,COVID-19 ,Humans ,Immunization ,Passive ,Reinfection ,SARS-CoV-2 ,Vaccines ,Inactivated ,COVID-19 Serotherapy ,Post-Acute COVID-19 Syndrome ,SARS-CoV-2 variants ,whole-genome sequencing ,reinfection ,post-acute COVID-19 syndrome ,COVID-19 breakthrough infection ,health personnel ,Microbiology ,Public Health and Health Services ,Clinical sciences ,Epidemiology ,Public health - Abstract
We describe a case of prolonged COVID-19 caused by the SARS-CoV-2 Gamma variant in a fully vaccinated healthcare worker, 387 days after an infection caused by lineage B.1.1.33. Infections were confirmed by whole-genome sequencing and corroborated by the detection of neutralizing antibodies in convalescent serum samples. Considering the permanent exposure of this healthcare worker to SARS-CoV-2, the waning immunity after the first infection, the low efficacy of the inactivated vaccine at preventing COVID-19, the immune escape of the Gamma variant (VOC), and the burden of post-COVID syndrome, this individual would have benefited from an additional dose of a heterologous vaccine.
- Published
- 2022
3. Domestic Dogs as Sentinels for West Nile Virus but not Aedes-borne Flaviviruses, Mexico
- Author
-
Davila, Edward, Fernandez-Santos, Nadia A., Estrada-Franco, Jose Guillermo, Wei, Lihua, Aguilar-Duran, Jesus A., de J. Lopez-Lopez, Maria, Solis-Hernandez, Roberto, Garcia-Miranda, Rosario, Velazquez-Ramirez, Doireyner Daniel, Torres-Romero, Jasiel, Chavez, Susana Arellano, Cruz-Cadena, Raul, Navarro-Lopez, Roberto, de Leon, Adalberto A. Perez, Guichard-Romero, Carlos, Martin, Estelle, Tang, Wendy, Frank, Matthias, Borucki, Monica, Turell, Michael J., Pauvolid-Correa, Alex, Rodriguez-Perez, Mario A., Ochoa-Diaz-Lopez, Hector, Hamer, Sarah A., and Hamer, Gabriel L.
- Subjects
West Nile virus -- Distribution ,Dogs -- Health aspects ,Disease transmission -- Risk factors ,Arbovirus diseases -- Risk factors ,Pets -- Health aspects ,Animals as carriers of disease -- Health aspects ,Vector-borne diseases -- Risk factors ,Company distribution practices ,Health - Abstract
Mosquito-transmitted viruses represent substantial health burdens across the Americas. Despite the broad geographic ranges of Aedes spp. and Culex spp. mosquitoes, the endemicity of human arboviral diseases is incongruent with [...]
- Published
- 2022
- Full Text
- View/download PDF
4. Post-acute COVID-19 syndrome after reinfection and vaccine breakthrough by the SARS-CoV-2 Gamma variant in Brazil
- Author
-
Stephanie L.S. Penetra, Michele F.B. da Silva, Paola Resende, Anielle Pina-Costa, Heloisa F.P. Santos, Lusiele Guaraldo, Guilherme A. Calvet, Maria Ogrzewalska, Ighor Arantes, Ketiuce Zukeram, Mia F. de Araújo, Ana Beatriz Machado Lima, Renata Serrano Lopes, Larissa R. Lira-Silva, Isabella V. Moraes, Mayumi D. Wakimoto, Trevon L. Fuller, Claudia Raja Gabaglia, Otávio M. Espíndola, Myrna C. Bonaldo, Cláudio Tadeu Daniel-Ribeiro, Jimmy Whitworth, Chris Smith, Karin Nielsen-Saines, Alex Pauvolid-Correa, Marilda M. Siqueira, and Patricia Brasil
- Subjects
SARS-CoV-2 variants ,whole-genome sequencing ,reinfection ,post-acute COVID-19 syndrome ,COVID-19 breakthrough infection ,health personnel ,Infectious and parasitic diseases ,RC109-216 - Abstract
We describe a case of prolonged COVID-19 caused by the SARS-CoV-2 Gamma variant in a fully vaccinated healthcare worker, 387 days after an infection caused by lineage B.1.1.33. Infections were confirmed by whole-genome sequencing and corroborated by the detection of neutralizing antibodies in convalescent serum samples. Considering the permanent exposure of this healthcare worker to SARS-CoV-2, the waning immunity after the first infection, the low efficacy of the inactivated vaccine at preventing COVID-19, the immune escape of the Gamma variant (VOC), and the burden of post-COVID syndrome, this individual would have benefited from an additional dose of a heterologous vaccine.
- Published
- 2022
- Full Text
- View/download PDF
5. Severe Acute Respiratory Syndrome Coronavirus 2 P.2 Lineage Associated with Reinfection Case, Brazil, June-October 2020
- Author
-
Resende, Paola Cristina, Bezerra, Joao Felipe, Vasconcelos, Romero Henrique Teixeira, Arantes, Ighor, Appolinario, Luciana, Mendonca, Ana Carolina, Paixao, Anna Carolina, Duarte, Ana Carolina, Silva, Thauane, Rocha, Alice Sampaio, Lima, Ana Beatriz Machado, Pauvolid-Correa, Alex, Motta, Fernando Couto, Teixeira, Dalane Loudal Florentino, Carneiro, Thiago Franco de Oliveira, Neto, Francisco Paulo Freire, Herbster, Isabel Diniz, Leite, Anderson Brandao, Riediger, Irina Nastassja, Debur, Maria do Carmo, Naveca, Felipe Gomes, Almeida, Walquiria, Livorati, Mirian, Bello, Gonzalo, and Siqueira, Marilda M.
- Subjects
Diseases -- Relapse ,Health - Abstract
The efficiency and persistence of natural protective immunity caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection or vaccination are currently unknown. Reinfection cases have been reported in different [...]
- Published
- 2021
- Full Text
- View/download PDF
6. Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)
- Author
-
Kuhn, J, Abe, J, Adkins, S, Alkhovsky, S, Avsic-Zupanc, T, Ayllon, M, Bahl, J, Balkema-Buschmann, A, Ballinger, M, Baranwal, V, Beer, M, Bejerman, N, Bergeron, E, Biedenkopf, N, Blair, C, Blasdell, K, Blouin, A, Bradfute, S, Briese, T, Brown, P, Buchholz, U, Buchmeier, M, Bukreyev, A, Burt, F, Buttner, C, Calisher, C, Cao, M, Casas, I, Chandran, K, Charrel, R, Chaturvedi, K, Chooi, K, Crane, A, Bo, E, de la Torre, J, de Souza, W, de Swart, R, Debat, H, Dheilly, N, Di Paola, N, Di Serio, F, Dietzgen, R, Digiaro, M, Drexler, J, Duprex, W, Durrwald, R, Easton, A, Elbeaino, T, Ergunay, K, Feng, G, Firth, A, Fooks, A, Formenty, P, Freitas-Astua, J, Gago-Zachert, S, Garcia, M, Garcia-Sastre, A, Garrison, A, Gaskin, T, Gong, W, Gonzalez, J, de Bellocq, J, Griffiths, A, Groschup, M, Gunther, I, Gunther, S, Hammond, J, Hasegawa, Y, Hayashi, K, Hepojoki, J, Higgins, C, Hongo, S, Horie, M, Hughes, H, Hume, A, Hyndman, T, Ikeda, K, Jiang, D, Jonson, G, Junglen, S, Klempa, B, Klingstrom, J, Kondo, H, Koonin, E, Krupovic, M, Kubota, K, Kurath, G, Laenen, L, Lambert, A, Li, J, Liu, R, Lukashevich, I, Macdiarmid, R, Maes, P, Marklewitz, M, Marshall, S, Marzano, S, Mccauley, J, Mirazimi, A, Muhlberger, E, Nabeshima, T, Naidu, R, Natsuaki, T, Navarro, B, Navarro, J, Neriya, Y, Netesov, S, Neumann, G, Nowotny, N, Nunes, M, Ochoa-Corona, F, Okada, T, Palacios, G, Pallas, V, Papa, A, Paraskevopoulou, S, Parrish, C, Pauvolid-Correa, A, Paweska, J, Perez, D, Pfaff, F, Plemper, R, Postler, T, Rabbidge, L, Radoshitzky, S, Ramos-Gonzalez, P, Rehanek, M, Resende, R, Reyes, C, Rodrigues, T, Romanowski, V, Rubbenstroth, D, Rubino, L, Runstadler, J, Sabanadzovic, S, Sadiq, S, Salvato, M, Sasaya, T, Schwemmle, M, Sharpe, S, Shi, M, Shimomoto, Y, Sidharthan, V, Sironi, M, Smither, S, Song, J, Spann, K, Spengler, J, Stenglein, M, Takada, A, Takeyama, S, Tatara, A, Tesh, R, Thornburg, N, Tian, X, Tischler, N, Tomitaka, Y, Tomonaga, K, Tordo, N, Tu, C, Turina, M, Tzanetakis, I, Vaira, A, van den Hoogen, B, Vanmechelen, B, Vasilakis, N, Verbeek, M, von Bargen, S, Wada, J, Wahl, V, Walker, P, Waltzek, T, Whitfield, A, Wolf, Y, Xia, H, Xylogianni, E, Yanagisawa, H, Yano, K, Ye, G, Yuan, Z, Zerbini, F, Zhang, G, Zhang, S, Zhang, Y, Zhao, L, Okland, A, Kuhn J. H., Abe J., Adkins S., Alkhovsky S. V., Avsic-Zupanc T., Ayllon M. A., Bahl J., Balkema-Buschmann A., Ballinger M. J., Baranwal V. K., Beer M., Bejerman N., Bergeron E., Biedenkopf N., Blair C. D., Blasdell K. R., Blouin A. G., Bradfute S. B., Briese T., Brown P. A., Buchholz U. J., Buchmeier M. J., Bukreyev A., Burt F., Buttner C., Calisher C. H., Cao M., Casas I., Chandran K., Charrel R. N., Chaturvedi K. K., Chooi K. M., Crane A., Bo E. D., de la Torre J. C., de Souza W. M., de Swart R. L., Debat H., Dheilly N. M., Di Paola N., Di Serio F., Dietzgen R. G., Digiaro M., Drexler J. F., Duprex W. P., Durrwald R., Easton A. J., Elbeaino T., Ergunay K., Feng G., Firth A. E., Fooks A. R., Formenty P. B. H., Freitas-Astua J., Gago-Zachert S., Garcia M. L., Garcia-Sastre A., Garrison A. R., Gaskin T. R., Gong W., Gonzalez J. -P. J., de Bellocq J., Griffiths A., Groschup M. H., Gunther I., Gunther S., Hammond J., Hasegawa Y., Hayashi K., Hepojoki J., Higgins C. M., Hongo S., Horie M., Hughes H. R., Hume A. J., Hyndman T. H., Ikeda K., Jiang D., Jonson G. B., Junglen S., Klempa B., Klingstrom J., Kondo H., Koonin E. V., Krupovic M., Kubota K., Kurath G., Laenen L., Lambert A. J., Li J., Li J. -M., Liu R., Lukashevich I. S., MacDiarmid R. M., Maes P., Marklewitz M., Marshall S. H., Marzano S. -Y. L., McCauley J. W., Mirazimi A., Muhlberger E., Nabeshima T., Naidu R., Natsuaki T., Navarro B., Navarro J. A., Neriya Y., Netesov S. V., Neumann G., Nowotny N., Nunes M. R. T., Ochoa-Corona F. M., Okada T., Palacios G., Pallas V., Papa A., Paraskevopoulou S., Parrish C. R., Pauvolid-Correa A., Paweska J. T., Perez D. R., Pfaff F., Plemper R. K., Postler T. S., Rabbidge L. O., Radoshitzky S. R., Ramos-Gonzalez P. L., Rehanek M., Resende R. O., Reyes C. A., Rodrigues T. C. S., Romanowski V., Rubbenstroth D., Rubino L., Runstadler J. A., Sabanadzovic S., Sadiq S., Salvato M. S., Sasaya T., Schwemmle M., Sharpe S. R., Shi M., Shimomoto Y., Sidharthan V. K., Sironi M., Smither S., Song J. -W., Spann K. M., Spengler J. R., Stenglein M. D., Takada A., Takeyama S., Tatara A., Tesh R. B., Thornburg N. J., Tian X., Tischler N. D., Tomitaka Y., Tomonaga K., Tordo N., Tu C., Turina M., Tzanetakis I. E., Vaira A. M., van den Hoogen B., Vanmechelen B., Vasilakis N., Verbeek M., von Bargen S., Wada J., Wahl V., Walker P. J., Waltzek T. B., Whitfield A. E., Wolf Y. I., Xia H., Xylogianni E., Yanagisawa H., Yano K., Ye G., Yuan Z., Zerbini F. M., Zhang G., Zhang S., Zhang Y. -Z., Zhao L., Okland A. L., Kuhn, J, Abe, J, Adkins, S, Alkhovsky, S, Avsic-Zupanc, T, Ayllon, M, Bahl, J, Balkema-Buschmann, A, Ballinger, M, Baranwal, V, Beer, M, Bejerman, N, Bergeron, E, Biedenkopf, N, Blair, C, Blasdell, K, Blouin, A, Bradfute, S, Briese, T, Brown, P, Buchholz, U, Buchmeier, M, Bukreyev, A, Burt, F, Buttner, C, Calisher, C, Cao, M, Casas, I, Chandran, K, Charrel, R, Chaturvedi, K, Chooi, K, Crane, A, Bo, E, de la Torre, J, de Souza, W, de Swart, R, Debat, H, Dheilly, N, Di Paola, N, Di Serio, F, Dietzgen, R, Digiaro, M, Drexler, J, Duprex, W, Durrwald, R, Easton, A, Elbeaino, T, Ergunay, K, Feng, G, Firth, A, Fooks, A, Formenty, P, Freitas-Astua, J, Gago-Zachert, S, Garcia, M, Garcia-Sastre, A, Garrison, A, Gaskin, T, Gong, W, Gonzalez, J, de Bellocq, J, Griffiths, A, Groschup, M, Gunther, I, Gunther, S, Hammond, J, Hasegawa, Y, Hayashi, K, Hepojoki, J, Higgins, C, Hongo, S, Horie, M, Hughes, H, Hume, A, Hyndman, T, Ikeda, K, Jiang, D, Jonson, G, Junglen, S, Klempa, B, Klingstrom, J, Kondo, H, Koonin, E, Krupovic, M, Kubota, K, Kurath, G, Laenen, L, Lambert, A, Li, J, Liu, R, Lukashevich, I, Macdiarmid, R, Maes, P, Marklewitz, M, Marshall, S, Marzano, S, Mccauley, J, Mirazimi, A, Muhlberger, E, Nabeshima, T, Naidu, R, Natsuaki, T, Navarro, B, Navarro, J, Neriya, Y, Netesov, S, Neumann, G, Nowotny, N, Nunes, M, Ochoa-Corona, F, Okada, T, Palacios, G, Pallas, V, Papa, A, Paraskevopoulou, S, Parrish, C, Pauvolid-Correa, A, Paweska, J, Perez, D, Pfaff, F, Plemper, R, Postler, T, Rabbidge, L, Radoshitzky, S, Ramos-Gonzalez, P, Rehanek, M, Resende, R, Reyes, C, Rodrigues, T, Romanowski, V, Rubbenstroth, D, Rubino, L, Runstadler, J, Sabanadzovic, S, Sadiq, S, Salvato, M, Sasaya, T, Schwemmle, M, Sharpe, S, Shi, M, Shimomoto, Y, Sidharthan, V, Sironi, M, Smither, S, Song, J, Spann, K, Spengler, J, Stenglein, M, Takada, A, Takeyama, S, Tatara, A, Tesh, R, Thornburg, N, Tian, X, Tischler, N, Tomitaka, Y, Tomonaga, K, Tordo, N, Tu, C, Turina, M, Tzanetakis, I, Vaira, A, van den Hoogen, B, Vanmechelen, B, Vasilakis, N, Verbeek, M, von Bargen, S, Wada, J, Wahl, V, Walker, P, Waltzek, T, Whitfield, A, Wolf, Y, Xia, H, Xylogianni, E, Yanagisawa, H, Yano, K, Ye, G, Yuan, Z, Zerbini, F, Zhang, G, Zhang, S, Zhang, Y, Zhao, L, Okland, A, Kuhn J. H., Abe J., Adkins S., Alkhovsky S. V., Avsic-Zupanc T., Ayllon M. A., Bahl J., Balkema-Buschmann A., Ballinger M. J., Baranwal V. K., Beer M., Bejerman N., Bergeron E., Biedenkopf N., Blair C. D., Blasdell K. R., Blouin A. G., Bradfute S. B., Briese T., Brown P. A., Buchholz U. J., Buchmeier M. J., Bukreyev A., Burt F., Buttner C., Calisher C. H., Cao M., Casas I., Chandran K., Charrel R. N., Chaturvedi K. K., Chooi K. M., Crane A., Bo E. D., de la Torre J. C., de Souza W. M., de Swart R. L., Debat H., Dheilly N. M., Di Paola N., Di Serio F., Dietzgen R. G., Digiaro M., Drexler J. F., Duprex W. P., Durrwald R., Easton A. J., Elbeaino T., Ergunay K., Feng G., Firth A. E., Fooks A. R., Formenty P. B. H., Freitas-Astua J., Gago-Zachert S., Garcia M. L., Garcia-Sastre A., Garrison A. R., Gaskin T. R., Gong W., Gonzalez J. -P. J., de Bellocq J., Griffiths A., Groschup M. H., Gunther I., Gunther S., Hammond J., Hasegawa Y., Hayashi K., Hepojoki J., Higgins C. M., Hongo S., Horie M., Hughes H. R., Hume A. J., Hyndman T. H., Ikeda K., Jiang D., Jonson G. B., Junglen S., Klempa B., Klingstrom J., Kondo H., Koonin E. V., Krupovic M., Kubota K., Kurath G., Laenen L., Lambert A. J., Li J., Li J. -M., Liu R., Lukashevich I. S., MacDiarmid R. M., Maes P., Marklewitz M., Marshall S. H., Marzano S. -Y. L., McCauley J. W., Mirazimi A., Muhlberger E., Nabeshima T., Naidu R., Natsuaki T., Navarro B., Navarro J. A., Neriya Y., Netesov S. V., Neumann G., Nowotny N., Nunes M. R. T., Ochoa-Corona F. M., Okada T., Palacios G., Pallas V., Papa A., Paraskevopoulou S., Parrish C. R., Pauvolid-Correa A., Paweska J. T., Perez D. R., Pfaff F., Plemper R. K., Postler T. S., Rabbidge L. O., Radoshitzky S. R., Ramos-Gonzalez P. L., Rehanek M., Resende R. O., Reyes C. A., Rodrigues T. C. S., Romanowski V., Rubbenstroth D., Rubino L., Runstadler J. A., Sabanadzovic S., Sadiq S., Salvato M. S., Sasaya T., Schwemmle M., Sharpe S. R., Shi M., Shimomoto Y., Sidharthan V. K., Sironi M., Smither S., Song J. -W., Spann K. M., Spengler J. R., Stenglein M. D., Takada A., Takeyama S., Tatara A., Tesh R. B., Thornburg N. J., Tian X., Tischler N. D., Tomitaka Y., Tomonaga K., Tordo N., Tu C., Turina M., Tzanetakis I. E., Vaira A. M., van den Hoogen B., Vanmechelen B., Vasilakis N., Verbeek M., von Bargen S., Wada J., Wahl V., Walker P. J., Waltzek T. B., Whitfield A. E., Wolf Y. I., Xia H., Xylogianni E., Yanagisawa H., Yano K., Ye G., Yuan Z., Zerbini F. M., Zhang G., Zhang S., Zhang Y. -Z., Zhao L., and Okland A. L.
- Abstract
In April 2023, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. The phylum was expanded by one new family, 14 new genera, and 140 new species. Two genera and 538 species were renamed. One species was moved, and four were abolished. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV
- Published
- 2023
7. 2021 Taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales
- Author
-
Kuhn, J, Adkins, S, Agwanda, B, Al Kubrusli, R, Alkhovsky, S, Amarasinghe, G, Avsic-Zupanc, T, Ayllon, M, Bahl, J, Balkema-Buschmann, A, Ballinger, M, Basler, C, Bavari, S, Beer, M, Bejerman, N, Bennett, A, Bente, D, Bergeron, E, Bird, B, Blair, C, Blasdell, K, Blystad, D, Bojko, J, Borth, W, Bradfute, S, Breyta, R, Briese, T, Brown, P, Brown, J, Buchholz, U, Buchmeier, M, Bukreyev, A, Burt, F, Buttner, C, Calisher, C, Cao, M, Casas, I, Chandran, K, Charrel, R, Cheng, Q, Chiaki, Y, Chiapello, M, Choi, I, Ciuffo, M, Clegg, J, Crozier, I, Dal Bo, E, de la Torre, J, de Lamballerie, X, de Swart, R, Debat, H, Dheilly, N, Di Cicco, E, Di Paola, N, Di Serio, F, Dietzgen, R, Digiaro, M, Dolnik, O, Drebot, M, Drexler, J, Dundon, W, Duprex, W, Durrwald, R, Dye, J, Easton, A, Ebihara, H, Elbeaino, T, Ergunay, K, Ferguson, H, Fooks, A, Forgia, M, Formenty, P, Franova, J, Freitas-Astua, J, Fu, J, Furl, S, Gago-Zachert, S, Gao, G, Garcia, M, Garcia-Sastre, A, Garrison, A, Gaskin, T, Gonzalez, J, Griffiths, A, Goldberg, T, Groschup, M, Gunther, S, Hall, R, Hammond, J, Han, T, Hepojoki, J, Hewson, R, Hong, J, Hong, N, Hongo, S, Horie, M, Hu, J, Hu, T, Hughes, H, Huttner, F, Hyndman, T, Ilyas, M, Jalkanen, R, Jiang, D, Jonson, G, Junglen, S, Kadono, F, Kaukinen, K, Kawate, M, Klempa, B, Klingstrom, J, Kobinger, G, Koloniuk, I, Kondo, H, Koonin, E, Krupovic, M, Kubota, K, Kurath, G, Laenen, L, Lambert, A, Langevin, S, Lee, B, Lefkowitz, E, Leroy, E, Li, S, Li, L, Li, J, Liu, H, Lukashevich, I, Maes, P, de Souza, W, Marklewitz, M, Marshall, S, Marzano, S, Massart, S, Mccauley, J, Melzer, M, Mielke-Ehret, N, Miller, K, Ming, T, Mirazimi, A, Mordecai, G, Muhlbach, H, Muhlberger, E, Naidu, R, Natsuaki, T, Navarro, J, Netesov, S, Neumann, G, Nowotny, N, Nunes, M, Olmedo-Velarde, A, Palacios, G, Pallas, V, Palyi, B, Papa, A, Paraskevopoulou, S, Park, A, Parrish, C, Patterson, D, Pauvolid-Correa, A, Paweska, J, Payne, S, Peracchio, C, Perez, D, Postler, T, Qi, L, Radoshitzky, S, Resende, R, Reyes, C, Rima, B, Luna, G, Romanowski, V, Rota, P, Rubbenstroth, D, Rubino, L, Runstadler, J, Sabanadzovic, S, Sall, A, Salvato, M, Sang, R, Sasaya, T, Schulze, A, Schwemmle, M, Shi, M, Shi, X, Shi, Z, Shimomoto, Y, Shirako, Y, Siddell, S, Simmonds, P, Sironi, M, Smagghe, G, Smither, S, Song, J, Spann, K, Spengler, J, Stenglein, M, Stone, D, Sugano, J, Suttle, C, Tabata, A, Takada, A, Takeuchi, S, Tchouassi, D, Teffer, A, Tesh, R, Thornburg, N, Tomitaka, Y, Tomonaga, K, Tordo, N, Torto, B, Towner, J, Tsuda, S, Tu, C, Turina, M, Tzanetakis, I, Uchida, J, Usugi, T, Vaira, A, Vallino, M, van den Hoogen, B, Varsani, A, Vasilakis, N, Verbeek, M, von Bargen, S, Wada, J, Wahl, V, Walker, P, Wang, L, Wang, G, Wang, Y, Waqas, M, Wei, T, Wen, S, Whitfield, A, Williams, J, Wolf, Y, Wu, J, Xu, L, Yanagisawa, H, Yang, C, Yang, Z, Zerbini, F, Zhai, L, Zhang, Y, Zhang, S, Zhang, J, Zhang, Z, Zhou, X, Kuhn JH, Adkins S, Agwanda BR, Al Kubrusli R, Alkhovsky SV, Amarasinghe GK, Avsic-Zupanc T, Ayllon MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Basler CF, Bavari S, Beer M, Bejerman N, Bennett AJ, Bente DA, Bergeron E, Bird BH, Blair CD, Blasdell KR, Blystad DR, Bojko J, Borth WB, Bradfute S, Breyta R, Briese T, Brown PA, Brown JK, Buchholz UJ, Buchmeier MJ, Bukreyev A, Burt F, Buttner C, Calisher CH, Cao MJ, Casas I, Chandran K, Charrel RN, Cheng Q, Chiaki Y, Chiapello M, Choi I, Ciuffo M, Clegg JCS, Crozier I, Dal Bo E, de la Torre JC, de Lamballerie X, de Swart RL, Debat H, Dheilly NM, Di Cicco E, Di Paola N, Di Serio F, Dietzgen RG, Digiaro M, Dolnik O, Drebot MA, Drexler JF, Dundon WG, Duprex WP, Durrwald R, Dye JM, Easton AJ, Ebihara H, Elbeaino T, Ergunay K, Ferguson HW, Fooks AR, Forgia M, Formenty PBH, Franova J, Freitas-Astua J, Fu JJ, Furl S, Gago-Zachert S, Gao GF, Garcia ML, Garcia-Sastre A, Garrison AR, Gaskin T, Gonzalez JPJ, Griffiths A, Goldberg TL, Groschup MH, Gunther S, Hall RA, Hammond J, Han T, Hepojoki J, Hewson R, Hong J, Hong N, Hongo S, Horie M, Hu JS, Hu T, Hughes HR, Huttner F, Hyndman TH, Ilyas M, Jalkanen R, Jiang DH, Jonson GB, Junglen S, Kadono F, Kaukinen KH, Kawate M, Klempa B, Klingstrom J, Kobinger G, Koloniuk I, Kondo H, Koonin EV, Krupovic M, Kubota K, Kurath G, Laenen L, Lambert AJ, Langevin SL, Lee B, Lefkowitz EJ, Leroy EM, Li SR, Li LH, Li JR, Liu HZ, Lukashevich IS, Maes P, de Souza WM, Marklewitz M, Marshall SH, Marzano SYL, Massart S, McCauley JW, Melzer M, Mielke-Ehret N, Miller KM, Ming TJ, Mirazimi A, Mordecai GJ, Muhlbach HP, Muhlberger E, Naidu R, Natsuaki T, Navarro JA, Netesov SV, Neumann G, Nowotny N, Nunes MRT, Olmedo-Velarde A, Palacios G, Pallas V, Palyi B, Papa A, Paraskevopoulou S, Park AC, Parrish CR, Patterson DA, Pauvolid-Correa A, Paweska JT, Payne S, Peracchio C, Perez DR, Postler TS, Qi LY, Radoshitzky SR, Resende RO, Reyes CA, Rima BK, Luna GR, Romanowski V, Rota P, Rubbenstroth D, Rubino L, Runstadler JA, Sabanadzovic S, Sall AA, Salvato MS, Sang RS, Sasaya T, Schulze AD, Schwemmle M, Shi M, Shi XH, Shi ZL, Shimomoto Y, Shirako Y, Siddell SG, Simmonds P, Sironi M, Smagghe G, Smither S, Song JW, Spann K, Spengler JR, Stenglein MD, Stone DM, Sugano J, Suttle CA, Tabata A, Takada A, Takeuchi S, Tchouassi DP, Teffer A, Tesh RB, Thornburg NJ, Tomitaka Y, Tomonaga K, Tordo N, Torto B, Towner JS, Tsuda S, Tu CC, Turina M, Tzanetakis IE, Uchida J, Usugi T, Vaira AM, Vallino M, van den Hoogen B, Varsani A, Vasilakis N, Verbeek M, von Bargen S, Wada J, Wahl V, Walker PJ, Wang LF, Wang GP, Wang YX, Wang YQ, Waqas M, Wei TY, Wen SH, Whitfield AE, Williams JV, Wolf YI, Wu JX, Xu L, Yanagisawa H, Yang CX, Yang ZK, Zerbini FM, Zhai L, Zhang YZ, Zhang S, Zhang JG, Zhang Z, Zhou XP, Kuhn, J, Adkins, S, Agwanda, B, Al Kubrusli, R, Alkhovsky, S, Amarasinghe, G, Avsic-Zupanc, T, Ayllon, M, Bahl, J, Balkema-Buschmann, A, Ballinger, M, Basler, C, Bavari, S, Beer, M, Bejerman, N, Bennett, A, Bente, D, Bergeron, E, Bird, B, Blair, C, Blasdell, K, Blystad, D, Bojko, J, Borth, W, Bradfute, S, Breyta, R, Briese, T, Brown, P, Brown, J, Buchholz, U, Buchmeier, M, Bukreyev, A, Burt, F, Buttner, C, Calisher, C, Cao, M, Casas, I, Chandran, K, Charrel, R, Cheng, Q, Chiaki, Y, Chiapello, M, Choi, I, Ciuffo, M, Clegg, J, Crozier, I, Dal Bo, E, de la Torre, J, de Lamballerie, X, de Swart, R, Debat, H, Dheilly, N, Di Cicco, E, Di Paola, N, Di Serio, F, Dietzgen, R, Digiaro, M, Dolnik, O, Drebot, M, Drexler, J, Dundon, W, Duprex, W, Durrwald, R, Dye, J, Easton, A, Ebihara, H, Elbeaino, T, Ergunay, K, Ferguson, H, Fooks, A, Forgia, M, Formenty, P, Franova, J, Freitas-Astua, J, Fu, J, Furl, S, Gago-Zachert, S, Gao, G, Garcia, M, Garcia-Sastre, A, Garrison, A, Gaskin, T, Gonzalez, J, Griffiths, A, Goldberg, T, Groschup, M, Gunther, S, Hall, R, Hammond, J, Han, T, Hepojoki, J, Hewson, R, Hong, J, Hong, N, Hongo, S, Horie, M, Hu, J, Hu, T, Hughes, H, Huttner, F, Hyndman, T, Ilyas, M, Jalkanen, R, Jiang, D, Jonson, G, Junglen, S, Kadono, F, Kaukinen, K, Kawate, M, Klempa, B, Klingstrom, J, Kobinger, G, Koloniuk, I, Kondo, H, Koonin, E, Krupovic, M, Kubota, K, Kurath, G, Laenen, L, Lambert, A, Langevin, S, Lee, B, Lefkowitz, E, Leroy, E, Li, S, Li, L, Li, J, Liu, H, Lukashevich, I, Maes, P, de Souza, W, Marklewitz, M, Marshall, S, Marzano, S, Massart, S, Mccauley, J, Melzer, M, Mielke-Ehret, N, Miller, K, Ming, T, Mirazimi, A, Mordecai, G, Muhlbach, H, Muhlberger, E, Naidu, R, Natsuaki, T, Navarro, J, Netesov, S, Neumann, G, Nowotny, N, Nunes, M, Olmedo-Velarde, A, Palacios, G, Pallas, V, Palyi, B, Papa, A, Paraskevopoulou, S, Park, A, Parrish, C, Patterson, D, Pauvolid-Correa, A, Paweska, J, Payne, S, Peracchio, C, Perez, D, Postler, T, Qi, L, Radoshitzky, S, Resende, R, Reyes, C, Rima, B, Luna, G, Romanowski, V, Rota, P, Rubbenstroth, D, Rubino, L, Runstadler, J, Sabanadzovic, S, Sall, A, Salvato, M, Sang, R, Sasaya, T, Schulze, A, Schwemmle, M, Shi, M, Shi, X, Shi, Z, Shimomoto, Y, Shirako, Y, Siddell, S, Simmonds, P, Sironi, M, Smagghe, G, Smither, S, Song, J, Spann, K, Spengler, J, Stenglein, M, Stone, D, Sugano, J, Suttle, C, Tabata, A, Takada, A, Takeuchi, S, Tchouassi, D, Teffer, A, Tesh, R, Thornburg, N, Tomitaka, Y, Tomonaga, K, Tordo, N, Torto, B, Towner, J, Tsuda, S, Tu, C, Turina, M, Tzanetakis, I, Uchida, J, Usugi, T, Vaira, A, Vallino, M, van den Hoogen, B, Varsani, A, Vasilakis, N, Verbeek, M, von Bargen, S, Wada, J, Wahl, V, Walker, P, Wang, L, Wang, G, Wang, Y, Waqas, M, Wei, T, Wen, S, Whitfield, A, Williams, J, Wolf, Y, Wu, J, Xu, L, Yanagisawa, H, Yang, C, Yang, Z, Zerbini, F, Zhai, L, Zhang, Y, Zhang, S, Zhang, J, Zhang, Z, Zhou, X, Kuhn JH, Adkins S, Agwanda BR, Al Kubrusli R, Alkhovsky SV, Amarasinghe GK, Avsic-Zupanc T, Ayllon MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Basler CF, Bavari S, Beer M, Bejerman N, Bennett AJ, Bente DA, Bergeron E, Bird BH, Blair CD, Blasdell KR, Blystad DR, Bojko J, Borth WB, Bradfute S, Breyta R, Briese T, Brown PA, Brown JK, Buchholz UJ, Buchmeier MJ, Bukreyev A, Burt F, Buttner C, Calisher CH, Cao MJ, Casas I, Chandran K, Charrel RN, Cheng Q, Chiaki Y, Chiapello M, Choi I, Ciuffo M, Clegg JCS, Crozier I, Dal Bo E, de la Torre JC, de Lamballerie X, de Swart RL, Debat H, Dheilly NM, Di Cicco E, Di Paola N, Di Serio F, Dietzgen RG, Digiaro M, Dolnik O, Drebot MA, Drexler JF, Dundon WG, Duprex WP, Durrwald R, Dye JM, Easton AJ, Ebihara H, Elbeaino T, Ergunay K, Ferguson HW, Fooks AR, Forgia M, Formenty PBH, Franova J, Freitas-Astua J, Fu JJ, Furl S, Gago-Zachert S, Gao GF, Garcia ML, Garcia-Sastre A, Garrison AR, Gaskin T, Gonzalez JPJ, Griffiths A, Goldberg TL, Groschup MH, Gunther S, Hall RA, Hammond J, Han T, Hepojoki J, Hewson R, Hong J, Hong N, Hongo S, Horie M, Hu JS, Hu T, Hughes HR, Huttner F, Hyndman TH, Ilyas M, Jalkanen R, Jiang DH, Jonson GB, Junglen S, Kadono F, Kaukinen KH, Kawate M, Klempa B, Klingstrom J, Kobinger G, Koloniuk I, Kondo H, Koonin EV, Krupovic M, Kubota K, Kurath G, Laenen L, Lambert AJ, Langevin SL, Lee B, Lefkowitz EJ, Leroy EM, Li SR, Li LH, Li JR, Liu HZ, Lukashevich IS, Maes P, de Souza WM, Marklewitz M, Marshall SH, Marzano SYL, Massart S, McCauley JW, Melzer M, Mielke-Ehret N, Miller KM, Ming TJ, Mirazimi A, Mordecai GJ, Muhlbach HP, Muhlberger E, Naidu R, Natsuaki T, Navarro JA, Netesov SV, Neumann G, Nowotny N, Nunes MRT, Olmedo-Velarde A, Palacios G, Pallas V, Palyi B, Papa A, Paraskevopoulou S, Park AC, Parrish CR, Patterson DA, Pauvolid-Correa A, Paweska JT, Payne S, Peracchio C, Perez DR, Postler TS, Qi LY, Radoshitzky SR, Resende RO, Reyes CA, Rima BK, Luna GR, Romanowski V, Rota P, Rubbenstroth D, Rubino L, Runstadler JA, Sabanadzovic S, Sall AA, Salvato MS, Sang RS, Sasaya T, Schulze AD, Schwemmle M, Shi M, Shi XH, Shi ZL, Shimomoto Y, Shirako Y, Siddell SG, Simmonds P, Sironi M, Smagghe G, Smither S, Song JW, Spann K, Spengler JR, Stenglein MD, Stone DM, Sugano J, Suttle CA, Tabata A, Takada A, Takeuchi S, Tchouassi DP, Teffer A, Tesh RB, Thornburg NJ, Tomitaka Y, Tomonaga K, Tordo N, Torto B, Towner JS, Tsuda S, Tu CC, Turina M, Tzanetakis IE, Uchida J, Usugi T, Vaira AM, Vallino M, van den Hoogen B, Varsani A, Vasilakis N, Verbeek M, von Bargen S, Wada J, Wahl V, Walker PJ, Wang LF, Wang GP, Wang YX, Wang YQ, Waqas M, Wei TY, Wen SH, Whitfield AE, Williams JV, Wolf YI, Wu JX, Xu L, Yanagisawa H, Yang CX, Yang ZK, Zerbini FM, Zhai L, Zhang YZ, Zhang S, Zhang JG, Zhang Z, and Zhou XP
- Abstract
In March 2021, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. The phylum was expanded by four families (Aliusviridae, Crepuscuviridae, Myriaviridae, and Natareviridae), three subfamilies (Alpharhabdovirinae, Betarhabdovirinae, and Gammarhabdovirinae), 42 genera, and 200 species. Thirty-nine species were renamed and/or moved and seven species were abolished. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV.
- Published
- 2021
8. 2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales
- Author
-
Kuhn, J, Adkins, S, Alioto, D, Alkhovsky, S, Amarasinghe, G, Anthony, S, Avsic-Aupanc, T, Ayllon, M, Bahl, J, Balkema-Buschmann, A, Ballinger, M, Bartonicka, T, Basler, C, Bavari, S, Beer, M, Bente, D, Bergeron, E, Bird, B, Blair, C, Blasdell, K, Bradfute, S, Breyta, R, Briese, T, Brown, P, Buchholz, U, Buchmeier, M, Bukreyev, A, Burt, F, Buzkan, N, Calisher, C, Cao, M, Casas, I, Chamberlain, J, Chandran, K, Charrel, R, Chen, B, Chiumenti, M, Choi, I, Clegg, J, Crozier, I, da Graca, J, Dal Bo, E, Davila, A, de la Torre, J, de Lamballerie, X, de Swart, R, Di Bello, P, Di Paola, N, Di Serio, F, Dietzgen, R, Digiaro, M, Dolja, V, Dolnik, O, Drebot, M, Drexler, J, Durrwald, R, Dufkova, L, Dundon, W, Duprex, W, Dye, J, Easton, A, Ebihara, H, Elbeaino, T, Ergunay, K, Fernandes, J, Fooks, A, Formenty, P, Forth, L, Fouchier, R, Freitas-Astua, J, Gago-Zachert, S, Gao, G, Garcia, M, Garcia-Sastre, A, Garrison, A, Gbakima, A, Goldstein, T, Gonzalez, J, Griffiths, A, Groschup, M, Gunther, S, Guterres, A, Hall, R, Hammond, J, Hassan, M, Hepojoki, J, Hepojoki, S, Hetzel, U, Hewson, R, Hoffmann, B, Hongo, S, Hoper, D, Horie, M, Hughes, H, Hyndman, T, Jambai, A, Jardim, R, Jiang, D, Jin, Q, Jonson, G, Junglen, S, Karadag, S, Keller, K, Klempa, B, Klingstrom, J, Kobinger, G, Kondo, H, Koonin, E, Krupovic, M, Kurath, G, Kuzmin, I, Laenen, L, Lamb, R, Lambert, A, Langevin, S, Lee, B, Lemos, E, Leroy, E, Li, D, Li, J, Liang, M, Liu, W, Liu, Y, Lukashevich, I, Maes, P, de Souza, W, Marklewitz, M, Marshall, S, Martelli, G, Martin, R, Marzano, S, Massart, S, Mccauley, J, Mielke-Ehret, N, Minafra, A, Minutolo, M, Mirazimi, A, Muhlbach, H, Muhlberger, E, Naidu, R, Natsuaki, T, Navarro, B, Navarro, J, Netesov, S, Neumann, G, Nowotny, N, Nunes, M, Nylund, A, Okland, A, Oliveira, R, Palacios, G, Pallas, V, Palyi, B, Papa, A, Parrish, C, Pauvolid-Correa, A, Paweska, J, Payne, S, Perez, D, Pfaff, F, Radoshitzky, S, Aziz-ul, R, Ramos-Gonzalez, P, Resende, R, Reyes, C, Rima, B, Romanowski, V, Luna, G, Rota, P, Rubbenstroth, D, Runstadler, J, Ruzek, D, Sabanadzovic, S, Salat, J, Sall, A, Salvato, M, Sarpkaya, K, Sasaya, T, Schwemmle, M, Shabbir, M, Shi, X, Shi, Z, Shirako, Y, Simmonds, P, Sirmarovaa, J, Sironi, M, Smither, S, Smura, T, Song, J, Spann, K, Spengler, J, Stenglein, M, Stone, D, Strakova, P, Takada, A, Tesh, R, Thornburg, N, Tomonaga, K, Tordo, N, Towner, J, Turina, M, Tzanetakis, I, Ulrich, R, Vaira, A, van den Hoogen, B, Varsani, A, Vasilakis, N, Verbeek, M, Wahl, V, Walker, P, Wang, H, Wang, J, Wang, X, Wang, L, Wei, T, Wells, H, Whitfield, A, Williams, J, Wolf, Y, Wu, Z, Yang, X, Yu, X, Yutin, N, Zerbini, F, Zhang, T, Zhang, Y, Zhou, G, Zhou, X, Kuhn JH, Adkins S, Alioto D, Alkhovsky SV, Amarasinghe GK, Anthony SJ, Avsic-Aupanc T, Ayllon MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Bartonicka T, Basler C, Bavari S, Beer M, Bente DA, Bergeron E, Bird BH, Blair C, Blasdell KR, Bradfute SB, Breyta R, Briese T, Brown PA, Buchholz UJ, Buchmeier MJ, Bukreyev A, Burt F, Buzkan N, Calisher CH, Cao MJ, Casas I, Chamberlain J, Chandran K, Charrel RN, Chen B, Chiumenti M, Choi I, Clegg JCS, Crozier I, da Graca JV, Dal Bo E, Davila AMR, de la Torre JC, de Lamballerie X, de Swart RL, Di Bello PL, Di Paola N, Di Serio F, Dietzgen RG, Digiaro M, Dolja VV, Dolnik O, Drebot MA, Drexler JF, Durrwald R, Dufkova L, Dundon WG, Duprex WP, Dye JM, Easton AJ, Ebihara H, Elbeaino T, Ergunay K, Fernandes J, Fooks AR, Formenty PBH, Forth LF, Fouchier RAM, Freitas-Astua J, Gago-Zachert S, Gao GF, Garcia ML, Garcia-Sastre A, Garrison AR, Gbakima A, Goldstein T, Gonzalez JPJ, Griffiths A, Groschup MH, Gunther S, Guterres A, Hall RA, Hammond J, Hassan M, Hepojoki J, Hepojoki S, Hetzel U, Hewson R, Hoffmann B, Hongo S, Hoper D, Horie M, Hughes HR, Hyndman TH, Jambai A, Jardim R, Jiang DH, Jin Q, Jonson GB, Junglen S, Karadag S, Keller KE, Klempa B, Klingstrom J, Kobinger G, Kondo H, Koonin EV, Krupovic M, Kurath G, Kuzmin IV, Laenen L, Lamb RA, Lambert AJ, Langevin SL, Lee BH, Lemos ERS, Leroy EM, Li DX, Li JR, Liang MF, Liu WW, Liu Y, Lukashevich IS, Maes P, de Souza WM, Marklewitz M, Marshall SH, Martelli GP, Martin RR, Marzano SYL, Massart S, McCauley JW, Mielke-Ehret N, Minafra A, Minutolo M, Mirazimi A, Muhlbach HP, Muhlberger E, Naidu R, Natsuaki T, Navarro B, Navarro JA, Netesov SV, Neumann G, Nowotny N, Nunes MRT, Nylund A, Okland AL, Oliveira RC, Palacios G, Pallas V, Palyi B, Papa A, Parrish CR, Pauvolid-Correa A, Paweska JT, Payne S, Perez DR, Pfaff F, Radoshitzky SR, Aziz-ul Rahman, Ramos-Gonzalez PL, Resende RO, Reyes CA, Rima BK, Romanowski V, Luna GR, Rota P, Rubbenstroth D, Runstadler JA, Ruzek D, Sabanadzovic S, Salat J, Sall AA, Salvato MS, Sarpkaya K, Sasaya T, Schwemmle M, Shabbir MZ, Shi XH, Shi ZL, Shirako Y, Simmonds P, Sirmarovaa J, Sironi M, Smither S, Smura T, Song JW, Spann KM, Spengler JR, Stenglein MD, Stone DM, Strakova P, Takada A, Tesh RB, Thornburg NJ, Tomonaga K, Tordo N, Towner JS, Turina M, Tzanetakis I, Ulrich RG, Vaira AM, van den Hoogen B, Varsani A, Vasilakis N, Verbeek M, Wahl V, Walker PJ, Wang H, Wang JW, Wang XF, Wang LF, Wei TY, Wells H, Whitfield AE, Williams JV, Wolf YI, Wu ZQ, Yang X, Yu XJ, Yutin N, Zerbini FM, Zhang T, Zhang YZ, Zhou GH, Zhou XP, Kuhn, J, Adkins, S, Alioto, D, Alkhovsky, S, Amarasinghe, G, Anthony, S, Avsic-Aupanc, T, Ayllon, M, Bahl, J, Balkema-Buschmann, A, Ballinger, M, Bartonicka, T, Basler, C, Bavari, S, Beer, M, Bente, D, Bergeron, E, Bird, B, Blair, C, Blasdell, K, Bradfute, S, Breyta, R, Briese, T, Brown, P, Buchholz, U, Buchmeier, M, Bukreyev, A, Burt, F, Buzkan, N, Calisher, C, Cao, M, Casas, I, Chamberlain, J, Chandran, K, Charrel, R, Chen, B, Chiumenti, M, Choi, I, Clegg, J, Crozier, I, da Graca, J, Dal Bo, E, Davila, A, de la Torre, J, de Lamballerie, X, de Swart, R, Di Bello, P, Di Paola, N, Di Serio, F, Dietzgen, R, Digiaro, M, Dolja, V, Dolnik, O, Drebot, M, Drexler, J, Durrwald, R, Dufkova, L, Dundon, W, Duprex, W, Dye, J, Easton, A, Ebihara, H, Elbeaino, T, Ergunay, K, Fernandes, J, Fooks, A, Formenty, P, Forth, L, Fouchier, R, Freitas-Astua, J, Gago-Zachert, S, Gao, G, Garcia, M, Garcia-Sastre, A, Garrison, A, Gbakima, A, Goldstein, T, Gonzalez, J, Griffiths, A, Groschup, M, Gunther, S, Guterres, A, Hall, R, Hammond, J, Hassan, M, Hepojoki, J, Hepojoki, S, Hetzel, U, Hewson, R, Hoffmann, B, Hongo, S, Hoper, D, Horie, M, Hughes, H, Hyndman, T, Jambai, A, Jardim, R, Jiang, D, Jin, Q, Jonson, G, Junglen, S, Karadag, S, Keller, K, Klempa, B, Klingstrom, J, Kobinger, G, Kondo, H, Koonin, E, Krupovic, M, Kurath, G, Kuzmin, I, Laenen, L, Lamb, R, Lambert, A, Langevin, S, Lee, B, Lemos, E, Leroy, E, Li, D, Li, J, Liang, M, Liu, W, Liu, Y, Lukashevich, I, Maes, P, de Souza, W, Marklewitz, M, Marshall, S, Martelli, G, Martin, R, Marzano, S, Massart, S, Mccauley, J, Mielke-Ehret, N, Minafra, A, Minutolo, M, Mirazimi, A, Muhlbach, H, Muhlberger, E, Naidu, R, Natsuaki, T, Navarro, B, Navarro, J, Netesov, S, Neumann, G, Nowotny, N, Nunes, M, Nylund, A, Okland, A, Oliveira, R, Palacios, G, Pallas, V, Palyi, B, Papa, A, Parrish, C, Pauvolid-Correa, A, Paweska, J, Payne, S, Perez, D, Pfaff, F, Radoshitzky, S, Aziz-ul, R, Ramos-Gonzalez, P, Resende, R, Reyes, C, Rima, B, Romanowski, V, Luna, G, Rota, P, Rubbenstroth, D, Runstadler, J, Ruzek, D, Sabanadzovic, S, Salat, J, Sall, A, Salvato, M, Sarpkaya, K, Sasaya, T, Schwemmle, M, Shabbir, M, Shi, X, Shi, Z, Shirako, Y, Simmonds, P, Sirmarovaa, J, Sironi, M, Smither, S, Smura, T, Song, J, Spann, K, Spengler, J, Stenglein, M, Stone, D, Strakova, P, Takada, A, Tesh, R, Thornburg, N, Tomonaga, K, Tordo, N, Towner, J, Turina, M, Tzanetakis, I, Ulrich, R, Vaira, A, van den Hoogen, B, Varsani, A, Vasilakis, N, Verbeek, M, Wahl, V, Walker, P, Wang, H, Wang, J, Wang, X, Wang, L, Wei, T, Wells, H, Whitfield, A, Williams, J, Wolf, Y, Wu, Z, Yang, X, Yu, X, Yutin, N, Zerbini, F, Zhang, T, Zhang, Y, Zhou, G, Zhou, X, Kuhn JH, Adkins S, Alioto D, Alkhovsky SV, Amarasinghe GK, Anthony SJ, Avsic-Aupanc T, Ayllon MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Bartonicka T, Basler C, Bavari S, Beer M, Bente DA, Bergeron E, Bird BH, Blair C, Blasdell KR, Bradfute SB, Breyta R, Briese T, Brown PA, Buchholz UJ, Buchmeier MJ, Bukreyev A, Burt F, Buzkan N, Calisher CH, Cao MJ, Casas I, Chamberlain J, Chandran K, Charrel RN, Chen B, Chiumenti M, Choi I, Clegg JCS, Crozier I, da Graca JV, Dal Bo E, Davila AMR, de la Torre JC, de Lamballerie X, de Swart RL, Di Bello PL, Di Paola N, Di Serio F, Dietzgen RG, Digiaro M, Dolja VV, Dolnik O, Drebot MA, Drexler JF, Durrwald R, Dufkova L, Dundon WG, Duprex WP, Dye JM, Easton AJ, Ebihara H, Elbeaino T, Ergunay K, Fernandes J, Fooks AR, Formenty PBH, Forth LF, Fouchier RAM, Freitas-Astua J, Gago-Zachert S, Gao GF, Garcia ML, Garcia-Sastre A, Garrison AR, Gbakima A, Goldstein T, Gonzalez JPJ, Griffiths A, Groschup MH, Gunther S, Guterres A, Hall RA, Hammond J, Hassan M, Hepojoki J, Hepojoki S, Hetzel U, Hewson R, Hoffmann B, Hongo S, Hoper D, Horie M, Hughes HR, Hyndman TH, Jambai A, Jardim R, Jiang DH, Jin Q, Jonson GB, Junglen S, Karadag S, Keller KE, Klempa B, Klingstrom J, Kobinger G, Kondo H, Koonin EV, Krupovic M, Kurath G, Kuzmin IV, Laenen L, Lamb RA, Lambert AJ, Langevin SL, Lee BH, Lemos ERS, Leroy EM, Li DX, Li JR, Liang MF, Liu WW, Liu Y, Lukashevich IS, Maes P, de Souza WM, Marklewitz M, Marshall SH, Martelli GP, Martin RR, Marzano SYL, Massart S, McCauley JW, Mielke-Ehret N, Minafra A, Minutolo M, Mirazimi A, Muhlbach HP, Muhlberger E, Naidu R, Natsuaki T, Navarro B, Navarro JA, Netesov SV, Neumann G, Nowotny N, Nunes MRT, Nylund A, Okland AL, Oliveira RC, Palacios G, Pallas V, Palyi B, Papa A, Parrish CR, Pauvolid-Correa A, Paweska JT, Payne S, Perez DR, Pfaff F, Radoshitzky SR, Aziz-ul Rahman, Ramos-Gonzalez PL, Resende RO, Reyes CA, Rima BK, Romanowski V, Luna GR, Rota P, Rubbenstroth D, Runstadler JA, Ruzek D, Sabanadzovic S, Salat J, Sall AA, Salvato MS, Sarpkaya K, Sasaya T, Schwemmle M, Shabbir MZ, Shi XH, Shi ZL, Shirako Y, Simmonds P, Sirmarovaa J, Sironi M, Smither S, Smura T, Song JW, Spann KM, Spengler JR, Stenglein MD, Stone DM, Strakova P, Takada A, Tesh RB, Thornburg NJ, Tomonaga K, Tordo N, Towner JS, Turina M, Tzanetakis I, Ulrich RG, Vaira AM, van den Hoogen B, Varsani A, Vasilakis N, Verbeek M, Wahl V, Walker PJ, Wang H, Wang JW, Wang XF, Wang LF, Wei TY, Wells H, Whitfield AE, Williams JV, Wolf YI, Wu ZQ, Yang X, Yu XJ, Yutin N, Zerbini FM, Zhang T, Zhang YZ, Zhou GH, and Zhou XP
- Abstract
In March 2020, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. At the genus rank, 20 new genera were added, two were deleted, one was moved, and three were renamed. At the species rank, 160 species were added, four were deleted, ten were moved and renamed, and 30 species were renamed. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV.
- Published
- 2020
9. SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses
- Author
-
Wanwisa Dejnirattisai, Jiandong Huo, Daming Zhou, Jiří Zahradník, Piyada Supasa, Chang Liu, Helen M.E. Duyvesteyn, Helen M. Ginn, Alexander J. Mentzer, Aekkachai Tuekprakhon, Rungtiwa Nutalai, Beibei Wang, Aiste Dijokaite, Suman Khan, Ori Avinoam, Mohammad Bahar, Donal Skelly, Sandra Adele, Sile Ann Johnson, Ali Amini, Thomas G. Ritter, Chris Mason, Christina Dold, Daniel Pan, Sara Assadi, Adam Bellass, Nicola Omo-Dare, David Koeckerling, Amy Flaxman, Daniel Jenkin, Parvinder K. Aley, Merryn Voysey, Sue Ann Costa Clemens, Felipe Gomes Naveca, Valdinete Nascimento, Fernanda Nascimento, Cristiano Fernandes da Costa, Paola Cristina Resende, Alex Pauvolid-Correa, Marilda M. Siqueira, Vicky Baillie, Natali Serafin, Gaurav Kwatra, Kelly Da Silva, Shabir A. Madhi, Marta C. Nunes, Tariq Malik, Peter J.M. Openshaw, J. Kenneth Baillie, Malcolm G. Semple, Alain R. Townsend, Kuan-Ying A. Huang, Tiong Kit Tan, Miles W. Carroll, Paul Klenerman, Eleanor Barnes, Susanna J. Dunachie, Bede Constantinides, Hermione Webster, Derrick Crook, Andrew J. Pollard, Teresa Lambe, Neil G. Paterson, Mark A. Williams, David R. Hall, Elizabeth E. Fry, Juthathip Mongkolsapaya, Jingshan Ren, Gideon Schreiber, David I. Stuart, Gavin R. Screaton, Christopher Conlon, Alexandra S. Deeks, John Frater, Lisa Frending, Siobhan Gardiner, Anni Jämsén, Katie Jeffery, Tom Malone, Eloise Phillips, Lucy Rothwell, Lizzie Stafford, J Kenneth Baillie, Peter JM. Openshaw, Gail Carson, Beatrice Alex, Petros Andrikopoulos, Benjamin Bach, Wendy S. Barclay, Debby Bogaert, Meera Chand, Kanta Chechi, Graham S. Cooke, Ana da Silva Filipe, Thushan de Silva, Annemarie B. Docherty, Gonçalo dos Santos Correia, Marc-Emmanuel Dumas, Jake Dunning, Tom Fletcher, Christoper A. Green, William Greenhalf, Julian L. Griffin, Rishi K. Gupta, Ewen M. Harrison, Julian A. Hiscox, Antonia Ying Wai Ho, Peter W. Horby, Samreen Ijaz, Saye Khoo, Andrew Law, Matthew R. Lewis, Sonia Liggi, Wei Shen Lim, Lynn Maslen, Laura Merson, Alison M. Meynert, Shona C. Moore, Mahdad Noursadeghi, Michael Olanipekun, Anthonia Osagie, Massimo Palmarini, Carlo Palmieri, William A. Paxton, Georgios Pollakis, Nicholas Price, Andrew Rambaut, David L. Robertson, Clark D. Russell, Vanessa Sancho-Shimizu, Caroline J. Sands, Janet T. Scott, Louise Sigfrid, Tom Solomon, Shiranee Sriskandan, David Stuart, Charlotte Summers, Olivia V. Swann, Zoltan Takats, Panteleimon Takis, Richard S. Tedder, AA Roger Thompson, Emma C. Thomson, Ryan S. Thwaites, Lance CW. Turtle, Maria Zambon, Hayley Hardwick, Chloe Donohue, Fiona Griffiths, Wilna Oosthuyzen, Cara Donegan, Rebecca G. Spencer, Lisa Norman, Riinu Pius, Thomas M. Drake, Cameron J. Fairfield, Stephen R. Knight, Kenneth A. Mclean, Derek Murphy, Catherine A. Shaw, Jo Dalton, Michelle Girvan, Egle Saviciute, Stephanie Roberts, Janet Harrison, Laura Marsh, Marie Connor, Sophie Halpin, Clare Jackson, Carrol Gamble, Daniel Plotkin, James Lee, Gary Leeming, Murray Wham, Sara Clohisey, Ross Hendry, James Scott-Brown, Victoria Shaw, Sarah E. McDonald, Seán Keating, Katie A. Ahmed, Jane A. Armstrong, Milton Ashworth, Innocent G. Asiimwe, Siddharth Bakshi, Samantha L. Barlow, Laura Booth, Benjamin Brennan, Katie Bullock, Benjamin WA. Catterall, Jordan J. Clark, Emily A. Clarke, Sarah Cole, Louise Cooper, Helen Cox, Christopher Davis, Oslem Dincarslan, Chris Dunn, Philip Dyer, Angela Elliott, Anthony Evans, Lorna Finch, Lewis WS. Fisher, Terry Foster, Isabel Garcia-Dorival, Philip Gunning, Catherine Hartley, Rebecca L. Jensen, Christopher B. Jones, Trevor R. Jones, Shadia Khandaker, Katharine King, Robyn T. Kiy, Chrysa Koukorava, Annette Lake, Suzannah Lant, Diane Latawiec, Lara Lavelle-Langham, Daniella Lefteri, Lauren Lett, Lucia A. Livoti, Maria Mancini, Sarah McDonald, Laurence McEvoy, John McLauchlan, Soeren Metelmann, Nahida S. Miah, Joanna Middleton, Joyce Mitchell, Ellen G. Murphy, Rebekah Penrice-Randal, Jack Pilgrim, Tessa Prince, Will Reynolds, P. Matthew Ridley, Debby Sales, Victoria E. Shaw, Rebecca K. Shears, Benjamin Small, Krishanthi S. Subramaniam, Agnieska Szemiel, Aislynn Taggart, Jolanta Tanianis-Hughes, Jordan Thomas, Erwan Trochu, Libby van Tonder, Eve Wilcock, J. Eunice Zhang, Lisa Flaherty, Nicole Maziere, Emily Cass, Alejandra Doce Carracedo, Nicola Carlucci, Anthony Holmes, Hannah Massey, Lee Murphy, Sarah McCafferty, Richard Clark, Angie Fawkes, Kirstie Morrice, Alan Maclean, Nicola Wrobel, Lorna Donnelly, Audrey Coutts, Katarzyna Hafezi, Louise MacGillivray, Tammy Gilchrist, Kayode Adeniji, Daniel Agranoff, Ken Agwuh, Dhiraj Ail, Erin L. Aldera, Ana Alegria, Sam Allen, Brian Angus, Abdul Ashish, Dougal Atkinson, Shahedal Bari, Gavin Barlow, Stella Barnass, Nicholas Barrett, Christopher Bassford, Sneha Basude, David Baxter, Michael Beadsworth, Jolanta Bernatoniene, John Berridge, Colin Berry, Nicola Best, Pieter Bothma, David Chadwick, Robin Brittain-Long, Naomi Bulteel, Tom Burden, Andrew Burtenshaw, Vikki Caruth, Duncan Chambler, Nigel Chee, Jenny Child, Srikanth Chukkambotla, Tom Clark, Paul Collini, Catherine Cosgrove, Jason Cupitt, Maria-Teresa Cutino-Moguel, Paul Dark, Chris Dawson, Samir Dervisevic, Phil Donnison, Sam Douthwaite, Andrew Drummond, Ingrid DuRand, Ahilanadan Dushianthan, Tristan Dyer, Cariad Evans, Chi Eziefula, Chrisopher Fegan, Adam Finn, Duncan Fullerton, Sanjeev Garg, Atul Garg, Effrossyni Gkrania-Klotsas, Jo Godden, Arthur Goldsmith, Clive Graham, Elaine Hardy, Stuart Hartshorn, Daniel Harvey, Peter Havalda, Daniel B. Hawcutt, Maria Hobrok, Luke Hodgson, Anil Hormis, Michael Jacobs, Susan Jain, Paul Jennings, Agilan Kaliappan, Vidya Kasipandian, Stephen Kegg, Michael Kelsey, Jason Kendall, Caroline Kerrison, Ian Kerslake, Oliver Koch, Gouri Koduri, George Koshy, Shondipon Laha, Steven Laird, Susan Larkin, Tamas Leiner, Patrick Lillie, James Limb, Vanessa Linnett, Jeff Little, Mark Lyttle, Michael MacMahon, Emily MacNaughton, Ravish Mankregod, Huw Masson, Elijah Matovu, Katherine McCullough, Ruth McEwen, Manjula Meda, Gary Mills, Jane Minton, Mariyam Mirfenderesky, Kavya Mohandas, Quen Mok, James Moon, Elinoor Moore, Patrick Morgan, Craig Morris, Katherine Mortimore, Samuel Moses, Mbiye Mpenge, Rohinton Mulla, Michael Murphy, Megan Nagel, Thapas Nagarajan, Mark Nelson, Lillian Norris, Matthew K. O’Shea, Igor Otahal, Marlies Ostermann, Mark Pais, Selva Panchatsharam, Danai Papakonstantinou, Hassan Paraiso, Brij Patel, Natalie Pattison, Justin Pepperell, Mark Peters, Mandeep Phull, Stefania Pintus, Jagtur Singh Pooni, Tim Planche, Frank Post, David Price, Rachel Prout, Nikolas Rae, Henrik Reschreiter, Tim Reynolds, Neil Richardson, Mark Roberts, Devender Roberts, Alistair Rose, Guy Rousseau, Bobby Ruge, Brendan Ryan, Taranprit Saluja, Matthias L. Schmid, Aarti Shah, Prad Shanmuga, Anil Sharma, Anna Shawcross, Jeremy Sizer, Manu Shankar-Hari, Richard Smith, Catherine Snelson, Nick Spittle, Nikki Staines, Tom Stambach, Richard Stewart, Pradeep Subudhi, Tamas Szakmany, Kate Tatham, Jo Thomas, Chris Thompson, Robert Thompson, Ascanio Tridente, Darell Tupper-Carey, Mary Twagira, Nick Vallotton, Rama Vancheeswaran, Lisa Vincent-Smith, Shico Visuvanathan, Alan Vuylsteke, Sam Waddy, Rachel Wake, Andrew Walden, Ingeborg Welters, Tony Whitehouse, Paul Whittaker, Ashley Whittington, Padmasayee Papineni, Meme Wijesinghe, Martin Williams, Lawrence Wilson, Stephen Winchester, Martin Wiselka, Adam Wolverson, Daniel G. Wootton, Andrew Workman, Bryan Yates, Peter Young, National Institute for Health Research, UK Research and Innovation, UKRI MRC COVID-19 Rapid Response Call, University of Oxford, Northwestern Polytechnical University (NPU), Charles University [Prague] (CU), Division of Immunology and Inflammation, Department of Medicine, Imperial College London-Hammersmith Hospital Campus, University of Dayton, Universiteit Gent = Ghent University (UGENT), Computational & Applied Vegetation Ecology (CAVElab), Nanjing University of Science and Technology (NJUST), Weizmann Institute of Science [Rehovot, Israël], Metabolic functional (epi)genomics and molecular mechanisms involved in type 2 diabetes and related diseases - UMR 8199 - UMR 1283 (EGENODIA (GI3M)), Institut Pasteur de Lille, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lille-Centre National de la Recherche Scientifique (CNRS), Imperial College London, and Apollo - University of Cambridge Repository
- Subjects
variants ,receptor interaction ,Omicron ,SARS-CoV-2 ,[SDV]Life Sciences [q-bio] ,OPTIC Consortium ,Spike ,vaccines ,06 Biological Sciences ,Article ,General Biochemistry, Genetics and Molecular Biology ,RBD ,ISARIC4C Consortium ,11 Medical and Health Sciences ,immune evasion ,Developmental Biology - Abstract
On the 24th November 2021 the sequence of a new SARS CoV-2 viral isolate Omicron-B.1.1.529 was announced, containing far more mutations in Spike (S) than previously reported variants. Neutralization titres of Omicron by sera from vaccinees and convalescent subjects infected with early pandemic as well as Alpha, Beta, Gamma, Delta are substantially reduced or fail to neutralize. Titres against Omicron are boosted by third vaccine doses and are high in cases both vaccinated and infected by Delta. Mutations in Omicron knock out or substantially reduce neutralization by most of a large panel of potent monoclonal antibodies and antibodies under commercial development. Omicron S has structural changes from earlier viruses, combining mutations conferring tight binding to ACE2 to unleash evolution driven by immune escape, leading to a large number of mutations in the ACE2 binding site which rebalance receptor affinity to that of early pandemic viruses., A comprehensive analysis of sera from vaccinees, convalescent patients infected previously by multiple variants and potent monoclonal antibodies from early in the COVID-19 pandemic reveals a substantial overall reduction the ability to neutralize the SARS-CoV-2 Omicron variant, which a third vaccine dose seems to ameliorate. Structural analyses of the Omicron RBD suggest a selective pressure enabling the virus bind ACE2 with increased affinity that is offset by other changes in the receptor binding motif that facilitates immune escape.
- Published
- 2022
10. High seroprevalence of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) at one of three captive cervid facilities in Texas
- Author
-
Christopher M. Roundy, Chase M. Nunez, Logan F. Thomas, Lisa D. Auckland, Wendy Tang, Jack J. Richison, Breanna R. Green, Clayton D. Hilton, Michael J. Cherry, Alex Pauvolid-Correa, Gabriel L. Hamer, Walter E. Cook, and Sarah A. Hamer
- Abstract
Free-ranging white-tailed deer (Odocoileus virginanus) across the United States are increasingly recognized as involved in SARS-CoV-2 transmission cycles. Through a cross-sectional study of 80 deer at three captive cervid facilities in central and southern Texas, we provide evidence of 34 of 36 (94.4%) white-tailed deer at a single captive cervid facility seropositive for SARS-CoV-2 by neutralization assay (PRNT90), with endpoint titers as high as 1280. In contrast, all tested white-tailed deer and axis deer (Axis axis) at two other captive cervid facilities were seronegative, and SARS-CoV-2 RNA was not detected in respiratory swabs from deer at any of the three facilities. These data support transmission among captive deer that cannot be explained by human contact for each infected animal, as only a subset of the seropositive does had direct human contact. The facility seroprevalence was more than double of that reported from wild deer, suggesting that the confined environment may facilitate transmission. Further exploration of captive cervids and other managed animals for their role in the epizootiology of SARS-CoV-2 is critical for understanding impacts on animal health and the potential for spillback transmission to humans or other animal taxa.ImportanceAs SARS-CoV-2 vaccine coverge of the human population increases and variants of concern continue to emerge, identification of the epidemiologic importance of animal virus reservoirs is critical. We found that nearly all (94.4%) of the captive white-tailed deer at a cervid facility in central Texas had neutralizing antibodies for SARS-CoV-2. This seroprevalence is over double than that which has been reported from free-ranging deer from other regions of the US. Horizontal transmission among deer may be facilitated in confinement. Tracking new infections among wild and confined deer is critical for understanding the importance of animal reservoirs for both veterinary and human health.
- Published
- 2022
11. DIFERENÇA NA LONGEVIDADE DE LINFÓCITOS T CD4+ E CD8+ EM UMA COORTE DE MÃES E CRIANÇAS COM HISTÓRICO DE INFECÇÃO POR ZIKV
- Author
-
da Silva, Jessica Badolato Corrêa, Carvalho, Fabiane Rabe, Paiva, Iury Amâncio, Familiar-Macedo, Débora, Dias, Helver Gonçalves, Pauvolid-Corrêa, Alex, Fernandes-Santos, Caroline, Lima, Monique da Rocha Queiroz, Gandini, Mariana, Silva, Andréa Alice, Cavalcanti, Silvia Maria Baeta, de Oliveira, Solange Artimos, Vianna, Renata Artimos de Oliveira, de Azeredo, Elzinandes Leal, Cardoso, Claudete Aparecida Araújo, Grifoni, Alba, Sette, Alessandro, Weiskopf, Daniela, and de-Oliveira-Pinto, Luzia Maria
- Published
- 2022
- Full Text
- View/download PDF
12. COMPREENSÃO DO IMPACTO DAS CÉLULAS TH17 NO DESENVOLVIMENTO DE MALFORMAÇÓES CONGÊNITAS POR ZIKV: ESTUDO EM DOADORAS COM HISTÓRICO DE INFECÇÃO NA GESTAÇÃO E DE CRIANÇAS EXPOSTAS AO VÍRUS POR TRANSMISSÃO VERTICAL
- Author
-
Paiva, Iury Amancio, Familiar-Macedo, Débora, Badolato-Corrêa, Jéssica, Carvalho, Fabiana Rabe, Dias, Helver Gonçalves, Pauvolid-Corrêa, Alex, Fernandes-Santos, Caroline, Silva, Andréa Alice, de Azeredo, Elzinandes Leal, Vianna, Renata Artimos de Oliveira, Cardoso, Claudete Aparecida Araújo, Grifoni, Alba, Sette, Alessandro, Weiskopf, Daniela, and de-Oliveira-Pinto, Luzia Maria
- Published
- 2022
- Full Text
- View/download PDF
13. Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses
- Author
-
Dejnirattisai, Wanwisa, Huo, Jiandong, Zhou, Daming, Zahradník, Jiří, Supasa, Piyada, Liu, Chang, Duyvesteyn, Helen M.E., Ginn, Helen M., Mentzer, Alexander J., Tuekprakhon, Aekkachai, Nutalai, Rungtiwa, Wang, Beibei, Dijokaite, Aiste, Khan, Suman, Avinoam, Ori, Bahar, Mohammad, Skelly, Donal, Adele, Sandra, Johnson, Sile Ann, Amini, Ali, Ritter, Thomas, Mason, Chris, Dold, Christina, Pan, Daniel, Assadi, Sara, Bellass, Adam, Omo-Dare, Nikki, Koeckerling, David, Flaxman, Amy, Jenkin, Daniel, Aley, Parvinder K, Voysey, Merryn, Clemens, Sue Ann Costa, Naveca, Felipe Gomes, Nascimento, Valdinete, Nascimento, Fernanda, Fernandes da Costa, Cristiano, Resende, Paola Cristina, Pauvolid-Correa, Alex, Siqueira, Marilda M., Baillie, Vicky, Serafin, Natali, Ditse, Zanele, Da Silva, Kelly, Madhi, Shabir, Nunes, Marta C, Malik, Tariq, Openshaw, Peter JM, Baillie, J Kenneth, Semple, Malcolm G, Townsend, Alain R, Huang, Kuan-Ying A., Tan, Tiong Kit, Carroll, Miles W., Klenerman, Paul, Barnes, Eleanor, Dunachie, Susanna J., Constantinides, Bede, Webster, Hermione, Crook, Derrick, Pollard, Andrew J, Lambe, Teresa, Paterson, Neil G., Williams, Mark A., Hall, David R., Fry, Elizabeth E., Mongkolsapaya, Juthathip, Ren, Jingshan, Schreiber, Gideon, Stuart, David I., and Screaton, Gavin R
- Subjects
Article - Abstract
SummaryOn the 24th November 2021 the sequence of a new SARS CoV-2 viral isolate spreading rapidly in Southern Africa was announced, containing far more mutations in Spike (S) than previously reported variants. Neutralization titres of Omicron by sera from vaccinees and convalescent subjects infected with early pandemic as well as Alpha, Beta, Gamma, Delta are substantially reduced or fail to neutralize. Titres against Omicron are boosted by third vaccine doses and are high in cases both vaccinated and infected by Delta. Mutations in Omicron knock out or substantially reduce neutralization by most of a large panel of potent monoclonal antibodies and antibodies under commercial development. Omicron S has structural changes from earlier viruses, combining mutations conferring tight binding to ACE2 to unleash evolution driven by immune escape, leading to a large number of mutations in the ACE2 binding site which rebalance receptor affinity to that of early pandemic viruses.
- Published
- 2021
14. SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses
- Author
-
Dejnirattisai, Wanwisa, primary, Huo, Jiandong, additional, Zhou, Daming, additional, Zahradník, Jiří, additional, Supasa, Piyada, additional, Liu, Chang, additional, Duyvesteyn, Helen M.E., additional, Ginn, Helen M., additional, Mentzer, Alexander J., additional, Tuekprakhon, Aekkachai, additional, Nutalai, Rungtiwa, additional, Wang, Beibei, additional, Dijokaite, Aiste, additional, Khan, Suman, additional, Avinoam, Ori, additional, Bahar, Mohammad, additional, Skelly, Donal, additional, Adele, Sandra, additional, Johnson, Sile Ann, additional, Amini, Ali, additional, Ritter, Thomas G., additional, Mason, Chris, additional, Dold, Christina, additional, Pan, Daniel, additional, Assadi, Sara, additional, Bellass, Adam, additional, Omo-Dare, Nicola, additional, Koeckerling, David, additional, Flaxman, Amy, additional, Jenkin, Daniel, additional, Aley, Parvinder K., additional, Voysey, Merryn, additional, Costa Clemens, Sue Ann, additional, Naveca, Felipe Gomes, additional, Nascimento, Valdinete, additional, Nascimento, Fernanda, additional, Fernandes da Costa, Cristiano, additional, Resende, Paola Cristina, additional, Pauvolid-Correa, Alex, additional, Siqueira, Marilda M., additional, Baillie, Vicky, additional, Serafin, Natali, additional, Kwatra, Gaurav, additional, Da Silva, Kelly, additional, Madhi, Shabir A., additional, Nunes, Marta C., additional, Malik, Tariq, additional, Openshaw, Peter J.M., additional, Baillie, J. Kenneth, additional, Semple, Malcolm G., additional, Townsend, Alain R., additional, Huang, Kuan-Ying A., additional, Tan, Tiong Kit, additional, Carroll, Miles W., additional, Klenerman, Paul, additional, Barnes, Eleanor, additional, Dunachie, Susanna J., additional, Constantinides, Bede, additional, Webster, Hermione, additional, Crook, Derrick, additional, Pollard, Andrew J., additional, Lambe, Teresa, additional, Paterson, Neil G., additional, Williams, Mark A., additional, Hall, David R., additional, Fry, Elizabeth E., additional, Mongkolsapaya, Juthathip, additional, Ren, Jingshan, additional, Schreiber, Gideon, additional, Stuart, David I., additional, Screaton, Gavin R., additional, Conlon, Christopher, additional, Deeks, Alexandra S., additional, Frater, John, additional, Frending, Lisa, additional, Gardiner, Siobhan, additional, Jämsén, Anni, additional, Jeffery, Katie, additional, Malone, Tom, additional, Phillips, Eloise, additional, Rothwell, Lucy, additional, Stafford, Lizzie, additional, Baillie, J Kenneth, additional, Openshaw, Peter JM., additional, Carson, Gail, additional, Alex, Beatrice, additional, Andrikopoulos, Petros, additional, Bach, Benjamin, additional, Barclay, Wendy S., additional, Bogaert, Debby, additional, Chand, Meera, additional, Chechi, Kanta, additional, Cooke, Graham S., additional, da Silva Filipe, Ana, additional, de Silva, Thushan, additional, Docherty, Annemarie B., additional, dos Santos Correia, Gonçalo, additional, Dumas, Marc-Emmanuel, additional, Dunning, Jake, additional, Fletcher, Tom, additional, Green, Christoper A., additional, Greenhalf, William, additional, Griffin, Julian L., additional, Gupta, Rishi K., additional, Harrison, Ewen M., additional, Hiscox, Julian A., additional, Wai Ho, Antonia Ying, additional, Horby, Peter W., additional, Ijaz, Samreen, additional, Khoo, Saye, additional, Law, Andrew, additional, Lewis, Matthew R., additional, Liggi, Sonia, additional, Lim, Wei Shen, additional, Maslen, Lynn, additional, Merson, Laura, additional, Meynert, Alison M., additional, Moore, Shona C., additional, Noursadeghi, Mahdad, additional, Olanipekun, Michael, additional, Osagie, Anthonia, additional, Palmarini, Massimo, additional, Palmieri, Carlo, additional, Paxton, William A., additional, Pollakis, Georgios, additional, Price, Nicholas, additional, Rambaut, Andrew, additional, Robertson, David L., additional, Russell, Clark D., additional, Sancho-Shimizu, Vanessa, additional, Sands, Caroline J., additional, Scott, Janet T., additional, Sigfrid, Louise, additional, Solomon, Tom, additional, Sriskandan, Shiranee, additional, Stuart, David, additional, Summers, Charlotte, additional, Swann, Olivia V., additional, Takats, Zoltan, additional, Takis, Panteleimon, additional, Tedder, Richard S., additional, Thompson, AA Roger, additional, Thomson, Emma C., additional, Thwaites, Ryan S., additional, Turtle, Lance CW., additional, Zambon, Maria, additional, Hardwick, Hayley, additional, Donohue, Chloe, additional, Griffiths, Fiona, additional, Oosthuyzen, Wilna, additional, Donegan, Cara, additional, Spencer, Rebecca G., additional, Norman, Lisa, additional, Pius, Riinu, additional, Drake, Thomas M., additional, Fairfield, Cameron J., additional, Knight, Stephen R., additional, Mclean, Kenneth A., additional, Murphy, Derek, additional, Shaw, Catherine A., additional, Dalton, Jo, additional, Girvan, Michelle, additional, Saviciute, Egle, additional, Roberts, Stephanie, additional, Harrison, Janet, additional, Marsh, Laura, additional, Connor, Marie, additional, Halpin, Sophie, additional, Jackson, Clare, additional, Gamble, Carrol, additional, Plotkin, Daniel, additional, Lee, James, additional, Leeming, Gary, additional, Wham, Murray, additional, Clohisey, Sara, additional, Hendry, Ross, additional, Scott-Brown, James, additional, Shaw, Victoria, additional, McDonald, Sarah E., additional, Keating, Seán, additional, Ahmed, Katie A., additional, Armstrong, Jane A., additional, Ashworth, Milton, additional, Asiimwe, Innocent G., additional, Bakshi, Siddharth, additional, Barlow, Samantha L., additional, Booth, Laura, additional, Brennan, Benjamin, additional, Bullock, Katie, additional, Catterall, Benjamin WA., additional, Clark, Jordan J., additional, Clarke, Emily A., additional, Cole, Sarah, additional, Cooper, Louise, additional, Cox, Helen, additional, Davis, Christopher, additional, Dincarslan, Oslem, additional, Dunn, Chris, additional, Dyer, Philip, additional, Elliott, Angela, additional, Evans, Anthony, additional, Finch, Lorna, additional, Fisher, Lewis WS., additional, Foster, Terry, additional, Garcia-Dorival, Isabel, additional, Gunning, Philip, additional, Hartley, Catherine, additional, Jensen, Rebecca L., additional, Jones, Christopher B., additional, Jones, Trevor R., additional, Khandaker, Shadia, additional, King, Katharine, additional, Kiy, Robyn T., additional, Koukorava, Chrysa, additional, Lake, Annette, additional, Lant, Suzannah, additional, Latawiec, Diane, additional, Lavelle-Langham, Lara, additional, Lefteri, Daniella, additional, Lett, Lauren, additional, Livoti, Lucia A., additional, Mancini, Maria, additional, McDonald, Sarah, additional, McEvoy, Laurence, additional, McLauchlan, John, additional, Metelmann, Soeren, additional, Miah, Nahida S., additional, Middleton, Joanna, additional, Mitchell, Joyce, additional, Murphy, Ellen G., additional, Penrice-Randal, Rebekah, additional, Pilgrim, Jack, additional, Prince, Tessa, additional, Reynolds, Will, additional, Ridley, P. Matthew, additional, Sales, Debby, additional, Shaw, Victoria E., additional, Shears, Rebecca K., additional, Small, Benjamin, additional, Subramaniam, Krishanthi S., additional, Szemiel, Agnieska, additional, Taggart, Aislynn, additional, Tanianis-Hughes, Jolanta, additional, Thomas, Jordan, additional, Trochu, Erwan, additional, van Tonder, Libby, additional, Wilcock, Eve, additional, Zhang, J. Eunice, additional, Flaherty, Lisa, additional, Maziere, Nicole, additional, Cass, Emily, additional, Carracedo, Alejandra Doce, additional, Carlucci, Nicola, additional, Holmes, Anthony, additional, Massey, Hannah, additional, Murphy, Lee, additional, McCafferty, Sarah, additional, Clark, Richard, additional, Fawkes, Angie, additional, Morrice, Kirstie, additional, Maclean, Alan, additional, Wrobel, Nicola, additional, Donnelly, Lorna, additional, Coutts, Audrey, additional, Hafezi, Katarzyna, additional, MacGillivray, Louise, additional, Gilchrist, Tammy, additional, Adeniji, Kayode, additional, Agranoff, Daniel, additional, Agwuh, Ken, additional, Ail, Dhiraj, additional, Aldera, Erin L., additional, Alegria, Ana, additional, Allen, Sam, additional, Angus, Brian, additional, Ashish, Abdul, additional, Atkinson, Dougal, additional, Bari, Shahedal, additional, Barlow, Gavin, additional, Barnass, Stella, additional, Barrett, Nicholas, additional, Bassford, Christopher, additional, Basude, Sneha, additional, Baxter, David, additional, Beadsworth, Michael, additional, Bernatoniene, Jolanta, additional, Berridge, John, additional, Berry, Colin, additional, Best, Nicola, additional, Bothma, Pieter, additional, Chadwick, David, additional, Brittain-Long, Robin, additional, Bulteel, Naomi, additional, Burden, Tom, additional, Burtenshaw, Andrew, additional, Caruth, Vikki, additional, Chambler, Duncan, additional, Chee, Nigel, additional, Child, Jenny, additional, Chukkambotla, Srikanth, additional, Clark, Tom, additional, Collini, Paul, additional, Cosgrove, Catherine, additional, Cupitt, Jason, additional, Cutino-Moguel, Maria-Teresa, additional, Dark, Paul, additional, Dawson, Chris, additional, Dervisevic, Samir, additional, Donnison, Phil, additional, Douthwaite, Sam, additional, Drummond, Andrew, additional, DuRand, Ingrid, additional, Dushianthan, Ahilanadan, additional, Dyer, Tristan, additional, Evans, Cariad, additional, Eziefula, Chi, additional, Fegan, Chrisopher, additional, Finn, Adam, additional, Fullerton, Duncan, additional, Garg, Sanjeev, additional, Garg, Atul, additional, Gkrania-Klotsas, Effrossyni, additional, Godden, Jo, additional, Goldsmith, Arthur, additional, Graham, Clive, additional, Hardy, Elaine, additional, Hartshorn, Stuart, additional, Harvey, Daniel, additional, Havalda, Peter, additional, Hawcutt, Daniel B., additional, Hobrok, Maria, additional, Hodgson, Luke, additional, Hormis, Anil, additional, Jacobs, Michael, additional, Jain, Susan, additional, Jennings, Paul, additional, Kaliappan, Agilan, additional, Kasipandian, Vidya, additional, Kegg, Stephen, additional, Kelsey, Michael, additional, Kendall, Jason, additional, Kerrison, Caroline, additional, Kerslake, Ian, additional, Koch, Oliver, additional, Koduri, Gouri, additional, Koshy, George, additional, Laha, Shondipon, additional, Laird, Steven, additional, Larkin, Susan, additional, Leiner, Tamas, additional, Lillie, Patrick, additional, Limb, James, additional, Linnett, Vanessa, additional, Little, Jeff, additional, Lyttle, Mark, additional, MacMahon, Michael, additional, MacNaughton, Emily, additional, Mankregod, Ravish, additional, Masson, Huw, additional, Matovu, Elijah, additional, McCullough, Katherine, additional, McEwen, Ruth, additional, Meda, Manjula, additional, Mills, Gary, additional, Minton, Jane, additional, Mirfenderesky, Mariyam, additional, Mohandas, Kavya, additional, Mok, Quen, additional, Moon, James, additional, Moore, Elinoor, additional, Morgan, Patrick, additional, Morris, Craig, additional, Mortimore, Katherine, additional, Moses, Samuel, additional, Mpenge, Mbiye, additional, Mulla, Rohinton, additional, Murphy, Michael, additional, Nagel, Megan, additional, Nagarajan, Thapas, additional, Nelson, Mark, additional, Norris, Lillian, additional, O’Shea, Matthew K., additional, Otahal, Igor, additional, Ostermann, Marlies, additional, Pais, Mark, additional, Panchatsharam, Selva, additional, Papakonstantinou, Danai, additional, Paraiso, Hassan, additional, Patel, Brij, additional, Pattison, Natalie, additional, Pepperell, Justin, additional, Peters, Mark, additional, Phull, Mandeep, additional, Pintus, Stefania, additional, Pooni, Jagtur Singh, additional, Planche, Tim, additional, Post, Frank, additional, Price, David, additional, Prout, Rachel, additional, Rae, Nikolas, additional, Reschreiter, Henrik, additional, Reynolds, Tim, additional, Richardson, Neil, additional, Roberts, Mark, additional, Roberts, Devender, additional, Rose, Alistair, additional, Rousseau, Guy, additional, Ruge, Bobby, additional, Ryan, Brendan, additional, Saluja, Taranprit, additional, Schmid, Matthias L., additional, Shah, Aarti, additional, Shanmuga, Prad, additional, Sharma, Anil, additional, Shawcross, Anna, additional, Sizer, Jeremy, additional, Shankar-Hari, Manu, additional, Smith, Richard, additional, Snelson, Catherine, additional, Spittle, Nick, additional, Staines, Nikki, additional, Stambach, Tom, additional, Stewart, Richard, additional, Subudhi, Pradeep, additional, Szakmany, Tamas, additional, Tatham, Kate, additional, Thomas, Jo, additional, Thompson, Chris, additional, Thompson, Robert, additional, Tridente, Ascanio, additional, Tupper-Carey, Darell, additional, Twagira, Mary, additional, Vallotton, Nick, additional, Vancheeswaran, Rama, additional, Vincent-Smith, Lisa, additional, Visuvanathan, Shico, additional, Vuylsteke, Alan, additional, Waddy, Sam, additional, Wake, Rachel, additional, Walden, Andrew, additional, Welters, Ingeborg, additional, Whitehouse, Tony, additional, Whittaker, Paul, additional, Whittington, Ashley, additional, Papineni, Padmasayee, additional, Wijesinghe, Meme, additional, Williams, Martin, additional, Wilson, Lawrence, additional, Winchester, Stephen, additional, Wiselka, Martin, additional, Wolverson, Adam, additional, Wootton, Daniel G., additional, Workman, Andrew, additional, Yates, Bryan, additional, and Young, Peter, additional
- Published
- 2022
- Full Text
- View/download PDF
15. High seroprevalence of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) at one of three captive cervid facilities in Texas
- Author
-
Roundy, Christopher M., primary, Nunez, Chase M., additional, Thomas, Logan F., additional, Auckland, Lisa D., additional, Tang, Wendy, additional, Richison, Jack J., additional, Green, Breanna R., additional, Hilton, Clayton D., additional, Cherry, Michael J., additional, Pauvolid-Correa, Alex, additional, Hamer, Gabriel L., additional, Cook, Walter E., additional, and Hamer, Sarah A., additional
- Published
- 2022
- Full Text
- View/download PDF
16. Post-acute COVID-19 syndrome after reinfection and vaccine breakthrough by the SARS-CoV-2 Gamma variant in Brazil
- Author
-
Penetra, Stephanie L.S., primary, da Silva, Michele F.B., additional, Resende, Paola, additional, Pina-Costa, Anielle, additional, Santos, Heloisa F.P., additional, Guaraldo, Lusiele, additional, Calvet, Guilherme A., additional, Ogrzewalska, Maria, additional, Arantes, Ighor, additional, Zukeram, Ketiuce, additional, de Araújo, Mia F., additional, Lima, Ana Beatriz Machado, additional, Lopes, Renata Serrano, additional, Lira-Silva, Larissa R., additional, Moraes, Isabella V., additional, Wakimoto, Mayumi D., additional, Fuller, Trevon L., additional, Gabaglia, Claudia Raja, additional, Espíndola, Otávio M., additional, Bonaldo, Myrna C., additional, Daniel-Ribeiro, Cláudio Tadeu, additional, Whitworth, Jimmy, additional, Smith, Chris, additional, Nielsen-Saines, Karin, additional, Pauvolid-Correa, Alex, additional, Siqueira, Marilda M., additional, and Brasil, Patricia, additional
- Published
- 2022
- Full Text
- View/download PDF
17. Taxonomy of the order Bunyavirales: update 2019
- Author
-
Abudurexiti, A, Adkins, S, Alioto, D, Alkhovsky, S, Avsic-Zupanc, T, Ballinger, M, Bente, D, Beer, M, Bergeron, E, Blair, C, Briese, T, Buchmeier, M, Burt, F, Calisher, C, Chang, C, Charrel, R, Choi, I, Clegg, J, la Torre, J, Lamballerie, X, Deng, F, Di Serio, F, Digiaro, M, Drebot, M, Duan, X, Ebihara, H, Elbeaino, T, Ergunay, K, Fulhorst, C, Garrison, A, Gao, G, Gonzalez, J, Groschup, M, Guenther, S, Haenni, A, Hall, R, Hepojoki, J, Hewson, R, Hu, Z, Hughes, H, Jonson, M, Junglen, S, Klempa, B, Klingstrom, J, Kou, C, Laenen, L, Lambert, A, Langevin, S, Liu, D, Lukashevich, I, Luo, T, Lu, C, Maes, P, de Souza, W, Marklewitz, M, Martelli, G, Matsuno, K, Mielke-Ehret, N, Minutolo, M, Mirazimi, A, Moming, A, Muhlbach, H, Naidu, R, Navarro, B, Nunes, M, Palacios, G, Papa, A, Pauvolid-Correa, A, Paweska, J, Qiao, J, Radoshitzky, S, Resende, R, Romanowski, V, Sall, A, Salvato, M, Sasaya, T, Shen, S, Shi, X, Shirako, Y, Simmonds, P, Sironi, M, Song, J, Spengler, J, Stenglein, M, Su, Z, Sun, S, Tang, S, Turina, M, Wang, B, Wang, C, Wang, H, Wang, J, Wei, T, Whitfield, A, Zerbini, F, Zhang, J, Zhang, L, Zhang, Y, Zhou, X, Zhu, L, Kuhn, J, Abudurexiti A, Adkins S, Alioto D, Alkhovsky SV, Avsic-Zupanc T, Ballinger MJ, Bente DA, Beer M, Bergeron E, Blair CD, Briese T, Buchmeier MJ, Burt FJ, Calisher CH, Chang C, Charrel RN, Choi IR, Clegg JCS, la Torre JC, Lamballerie X, Deng F, Di Serio F, Digiaro M, Drebot MA, Duan XM, Ebihara H, Elbeaino T, Ergunay K, Fulhorst CF, Garrison AR, Gao GF, Gonzalez JPJ, Groschup MH, Guenther S, Haenni AL, Hall RA, Hepojoki J, Hewson R, Hu Z, Hughes HR, Jonson MG, Junglen S, Klempa B, Klingstrom J, Kou C, Laenen L, Lambert AJ, Langevin SA, Liu D, Lukashevich IS, Luo T, Lu CW, Maes P, de Souza WM, Marklewitz M, Martelli GP, Matsuno K, Mielke-Ehret N, Minutolo M, Mirazimi A, Moming A, Muhlbach HP, Naidu R, Navarro B, Nunes MRT, Palacios G, Papa A, Pauvolid-Correa A, Paweska JT, Qiao J, Radoshitzky SR, Resende RO, Romanowski V, Sall AA, Salvato MS, Sasaya T, Shen S, Shi XH, Shirako Y, Simmonds P, Sironi M, Song JW, Spengler JR, Stenglein MD, Su ZY, Sun S, Tang S, Turina M, Wang B, Wang C, Wang HL, Wang J, Wei TY, Whitfield AE, Zerbini FM, Zhang J, Zhang L, Zhang YF, Zhang YZ, Zhang Y, Zhou X, Zhu L, Kuhn JH, Abudurexiti, A, Adkins, S, Alioto, D, Alkhovsky, S, Avsic-Zupanc, T, Ballinger, M, Bente, D, Beer, M, Bergeron, E, Blair, C, Briese, T, Buchmeier, M, Burt, F, Calisher, C, Chang, C, Charrel, R, Choi, I, Clegg, J, la Torre, J, Lamballerie, X, Deng, F, Di Serio, F, Digiaro, M, Drebot, M, Duan, X, Ebihara, H, Elbeaino, T, Ergunay, K, Fulhorst, C, Garrison, A, Gao, G, Gonzalez, J, Groschup, M, Guenther, S, Haenni, A, Hall, R, Hepojoki, J, Hewson, R, Hu, Z, Hughes, H, Jonson, M, Junglen, S, Klempa, B, Klingstrom, J, Kou, C, Laenen, L, Lambert, A, Langevin, S, Liu, D, Lukashevich, I, Luo, T, Lu, C, Maes, P, de Souza, W, Marklewitz, M, Martelli, G, Matsuno, K, Mielke-Ehret, N, Minutolo, M, Mirazimi, A, Moming, A, Muhlbach, H, Naidu, R, Navarro, B, Nunes, M, Palacios, G, Papa, A, Pauvolid-Correa, A, Paweska, J, Qiao, J, Radoshitzky, S, Resende, R, Romanowski, V, Sall, A, Salvato, M, Sasaya, T, Shen, S, Shi, X, Shirako, Y, Simmonds, P, Sironi, M, Song, J, Spengler, J, Stenglein, M, Su, Z, Sun, S, Tang, S, Turina, M, Wang, B, Wang, C, Wang, H, Wang, J, Wei, T, Whitfield, A, Zerbini, F, Zhang, J, Zhang, L, Zhang, Y, Zhou, X, Zhu, L, Kuhn, J, Abudurexiti A, Adkins S, Alioto D, Alkhovsky SV, Avsic-Zupanc T, Ballinger MJ, Bente DA, Beer M, Bergeron E, Blair CD, Briese T, Buchmeier MJ, Burt FJ, Calisher CH, Chang C, Charrel RN, Choi IR, Clegg JCS, la Torre JC, Lamballerie X, Deng F, Di Serio F, Digiaro M, Drebot MA, Duan XM, Ebihara H, Elbeaino T, Ergunay K, Fulhorst CF, Garrison AR, Gao GF, Gonzalez JPJ, Groschup MH, Guenther S, Haenni AL, Hall RA, Hepojoki J, Hewson R, Hu Z, Hughes HR, Jonson MG, Junglen S, Klempa B, Klingstrom J, Kou C, Laenen L, Lambert AJ, Langevin SA, Liu D, Lukashevich IS, Luo T, Lu CW, Maes P, de Souza WM, Marklewitz M, Martelli GP, Matsuno K, Mielke-Ehret N, Minutolo M, Mirazimi A, Moming A, Muhlbach HP, Naidu R, Navarro B, Nunes MRT, Palacios G, Papa A, Pauvolid-Correa A, Paweska JT, Qiao J, Radoshitzky SR, Resende RO, Romanowski V, Sall AA, Salvato MS, Sasaya T, Shen S, Shi XH, Shirako Y, Simmonds P, Sironi M, Song JW, Spengler JR, Stenglein MD, Su ZY, Sun S, Tang S, Turina M, Wang B, Wang C, Wang HL, Wang J, Wei TY, Whitfield AE, Zerbini FM, Zhang J, Zhang L, Zhang YF, Zhang YZ, Zhang Y, Zhou X, Zhu L, and Kuhn JH
- Abstract
In February 2019, following the annual taxon ratification vote, the order Bunyavirales was amended by creation of two new families, four new subfamilies, 11 new genera and 77 new species, merging of two species, and deletion of one species. This article presents the updated taxonomy of the order Bunyavirales now accepted by the International Committee on Taxonomy of Viruses (ICTV).
- Published
- 2019
18. Reduced neutralization of SARS-CoV-2 B.1.617 by vaccine and convalescent serum
- Author
-
Liu, Chang, primary, Ginn, Helen M., additional, Dejnirattisai, Wanwisa, additional, Supasa, Piyada, additional, Wang, Beibei, additional, Tuekprakhon, Aekkachai, additional, Nutalai, Rungtiwa, additional, Zhou, Daming, additional, Mentzer, Alexander J., additional, Zhao, Yuguang, additional, Duyvesteyn, Helen M.E., additional, López-Camacho, César, additional, Slon-Campos, Jose, additional, Walter, Thomas S., additional, Skelly, Donal, additional, Johnson, Sile Ann, additional, Ritter, Thomas G., additional, Mason, Chris, additional, Costa Clemens, Sue Ann, additional, Gomes Naveca, Felipe, additional, Nascimento, Valdinete, additional, Nascimento, Fernanda, additional, Fernandes da Costa, Cristiano, additional, Resende, Paola Cristina, additional, Pauvolid-Correa, Alex, additional, Siqueira, Marilda M., additional, Dold, Christina, additional, Temperton, Nigel, additional, Dong, Tao, additional, Pollard, Andrew J., additional, Knight, Julian C., additional, Crook, Derrick, additional, Lambe, Teresa, additional, Clutterbuck, Elizabeth, additional, Bibi, Sagida, additional, Flaxman, Amy, additional, Bittaye, Mustapha, additional, Belij-Rammerstorfer, Sandra, additional, Gilbert, Sarah C., additional, Malik, Tariq, additional, Carroll, Miles W., additional, Klenerman, Paul, additional, Barnes, Eleanor, additional, Dunachie, Susanna J., additional, Baillie, Vicky, additional, Serafin, Natali, additional, Ditse, Zanele, additional, Da Silva, Kelly, additional, Paterson, Neil G., additional, Williams, Mark A., additional, Hall, David R., additional, Madhi, Shabir, additional, Nunes, Marta C., additional, Goulder, Philip, additional, Fry, Elizabeth E., additional, Mongkolsapaya, Juthathip, additional, Ren, Jingshan, additional, Stuart, David I., additional, and Screaton, Gavin R., additional
- Published
- 2021
- Full Text
- View/download PDF
19. Taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales
- Author
-
Kuhn J.H., Adkins S., Agwanda B.R., Al Kubrusli R., Alkhovsky S.V., Amarasinghe G.K., Avsic-Zupanc T., Ayllon M.A., Bahl J., Balkema-Buschmann A., Ballinger M.J., Basler C.F., Bavari S., Beer M., Bejerman N., Bennett A.J., Bente D.A., Bergeron E., Bird B.H., Blair C.D., Blasdell K.R., Blystad D.-R., Bojko J., Borth W.B., Bradfute S., Breyta R., Briese T., Brown P.A., Brown J.K., Buchholz U.J., Buchmeier M.J., Bukreyev A., Burt F., Buttner C., Calisher C.H., Cao M., Casas I., Chandran K., Charrel R.N., Cheng Q., Chiaki Y., Chiapello M., Choi I.-R., Ciuffo M., Clegg J.C.S., Crozier I., Dal Bo E., de la Torre J.C., de Lamballerie X., de Swart R.L., Debat H., Dheilly N.M., Di Cicco E., Di Paola N., Di Serio F., Dietzgen R.G., Digiaro M., Dolnik O., Drebot M.A., Drexler J.F., Dundon W.G., Duprex W.P., Durrwald R., Dye J.M., Easton A.J., Ebihara H., Elbeaino T., Ergunay K., Ferguson H.W., Fooks A.R., Forgia M., Formenty P.B.H., Franova J., Freitas-Astua J., Fu J., Furl S., Gago-Zachert S., Gao G.F., Garcia M.L., Garcia-Sastre A., Garrison A.R., Gaskin T., Gonzalez J.-P.J., Griffiths A., Goldberg T.L., Groschup M.H., Gunther S., Hall R.A., Hammond J., Han T., Hepojoki J., Hewson R., Hong J., Hong N., Hongo S., Horie M., Hu J.S., Hu T., Hughes H.R., Huttner F., Hyndman T.H., Ilyas M., Jalkanen R., Jiang D., Jonson G.B., Junglen S., Kadono F., Kaukinen K.H., Kawate M., Klempa B., Klingstrom J., Kobinger G., Koloniuk I., Kondo H., Koonin E.V., Krupovic M., Kubota K., Kurath G., Laenen L., Lambert A.J., Langevin S.L., Lee B., Lefkowitz E.J., Leroy E.M., Li S., Li L., Li J., Liu H., Lukashevich I.S., Maes P., de Souza W.M., Marklewitz M., Marshall S.H., Marzano S.-Y.L., Massart S., McCauley J.W., Melzer M., Mielke-Ehret N., Miller K.M., Ming T.J., Mirazimi A., Mordecai G.J., Muhlbach H.-P., Muhlberger E., Naidu R., Natsuaki T., Navarro J.A., Netesov S.V., Neumann G., Nowotny N., Nunes M.R.T., Olmedo-Velarde A., Palacios G., Pallas V., Palyi B., Papa A., Paraskevopoulou S., Park A.C., Parrish C.R., Patterson D.A., Pauvolid-Correa A., Paweska J.T., Payne S., Peracchio C., Perez D.R., Postler T.S., Qi L., Radoshitzky S.R., Resende R.O., Reyes C.A., Rima B.K., Luna G.R., Romanowski V., Rota P., Rubbenstroth D., Rubino L., Runstadler J.A., Sabanadzovic S., Sall A.A., Salvato M.S., Sang R., Sasaya T., Schulze A.D., Schwemmle M., Shi M., Shi X., Shi Z., Shimomoto Y., Shirako Y., Siddell S.G., Simmonds P., Sironi M., Smagghe G., Smither S., Song J.-W., Spann K., Spengler J.R., Stenglein M.D., Stone D.M., Sugano J., Suttle C.A., Tabata A., Takada A., Takeuchi S., Tchouassi D.P., Teffer A., Tesh R.B., Thornburg N.J., Tomitaka Y., Tomonaga K., Tordo N., Torto B., Towner J.S., Tsuda S., Tu C., Turina M., Tzanetakis I.E., Uchida J., Usugi T., Vaira A.M., Vallino M., van den Hoogen B., Varsani A., Vasilakis N., Verbeek M., von Bargen S., Wada J., Wahl V., Walker P.J., Wang L.-F., Wang G., Wang Y., Waqas M., Wei T., Wen S., Whitfield A.E., Williams J.V., Wolf Y.I., Wu J., Xu L., Yanagisawa H., Yang C., Yang Z., Zerbini F.M., Zhai L., Zhang Y.-Z., Zhang S., Zhang J., Zhang Z., and Zhou X.
- Subjects
Virus classification ,Negative-stranded RNA viruses - Abstract
In March 2021, following the annual International Committee on Taxonomy of Viruses (ICTV) ratifcation vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. The phylum was expanded by four families (Aliusviridae, Crepuscuviridae, Myriaviridae, and Natareviridae), three subfamilies (Alpharhabdovirinae, Betarhabdovirinae, and Gammarhabdovirinae), 42 genera, and 200 species. Thirty-nine species were renamed and/ or moved and seven species were abolished. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV
- Published
- 2021
20. Reduced neutralization of SARS-CoV-2 B.1.617 by vaccine and convalescent serum
- Author
-
Liu, Chang, Ginn, Helen M., Dejnirattisai, Wanwisa, Supasa, Piyada, Wang, Beibei, Tuekprakhon, Aekkachai, Nutalai, Rungtiwa, Zhou, Daming, Mentzer, Alexander J., Zhao, Yuguang, Duyvesteyn, Helen M.E., López-Camacho, César, Slon-Campos, Jose, Walter, Thomas S., Skelly, Donal, Johnson, Sile Ann, Ritter, Thomas G., Mason, Chris, Costa Clemens, Sue Ann, Naveca, Felipe Gomes, Nascimento, Valdinete, Nascimento, Fernanda, Fernandes da Costa, Cristiano, Resende, Paola Cristina, Pauvolid-Correa, Alex, Siqueira, Marilda M., Dold, Christina, Temperton, Nigel J., Dong, Tao, Pollard, Andrew J., Knight, Julian C., Crook, Derrick, Lambe, Teresa, Clutterbuck, Elizabeth, Bibi, Sagida, Flaxman, Amy, Bittaye, Mustapha, Belij-Rammerstorfer, Sandra, Gilbert, Sarah C., Malik, Tariq, Carroll, Miles W., Klenerman, Paul, Barnes, Eleanor, Dunachie, Susanna J., Baillie, Vicky, Serafin, Natali, Ditse, Zanele, Da Silva, Kelly, Paterson, Neil G., Williams, Mark A., Hall, David R., Madhi, Shabir, Nunes, Marta C., Goulder, Philip, Fry, Elizabeth E., Mongkolsapaya, Juthathip, Ren, Jingshan, Stuart, David I., Screaton, Gavin R., Liu, Chang, Ginn, Helen M., Dejnirattisai, Wanwisa, Supasa, Piyada, Wang, Beibei, Tuekprakhon, Aekkachai, Nutalai, Rungtiwa, Zhou, Daming, Mentzer, Alexander J., Zhao, Yuguang, Duyvesteyn, Helen M.E., López-Camacho, César, Slon-Campos, Jose, Walter, Thomas S., Skelly, Donal, Johnson, Sile Ann, Ritter, Thomas G., Mason, Chris, Costa Clemens, Sue Ann, Naveca, Felipe Gomes, Nascimento, Valdinete, Nascimento, Fernanda, Fernandes da Costa, Cristiano, Resende, Paola Cristina, Pauvolid-Correa, Alex, Siqueira, Marilda M., Dold, Christina, Temperton, Nigel J., Dong, Tao, Pollard, Andrew J., Knight, Julian C., Crook, Derrick, Lambe, Teresa, Clutterbuck, Elizabeth, Bibi, Sagida, Flaxman, Amy, Bittaye, Mustapha, Belij-Rammerstorfer, Sandra, Gilbert, Sarah C., Malik, Tariq, Carroll, Miles W., Klenerman, Paul, Barnes, Eleanor, Dunachie, Susanna J., Baillie, Vicky, Serafin, Natali, Ditse, Zanele, Da Silva, Kelly, Paterson, Neil G., Williams, Mark A., Hall, David R., Madhi, Shabir, Nunes, Marta C., Goulder, Philip, Fry, Elizabeth E., Mongkolsapaya, Juthathip, Ren, Jingshan, Stuart, David I., and Screaton, Gavin R.
- Abstract
SARS-CoV-2 has undergone progressive change with variants conferring advantage rapidly becoming dominant lineages e.g. B.1.617. With apparent increased transmissibility variant B.1.617.2 has contributed to the current wave of infection ravaging the Indian subcontinent and has been designated a variant of concern in the UK. Here we study the ability of monoclonal antibodies, convalescent and vaccine sera to neutralize B.1.617.1 and B.1.617.2 and complement this with structural analyses of Fab/RBD complexes and map the antigenic space of current variants. Neutralization of both viruses is reduced when compared with ancestral Wuhan related strains but there is no evidence of widespread antibody escape as seen with B.1.351. However, B.1.351 and P.1 sera showed markedly more reduction in neutralization of B.1.617.2 suggesting that individuals previously infected by these variants may be more susceptible to reinfection by B.1.617.2. This observation provides important new insight for immunisation policy with future variant vaccines in non-immune populations.
- Published
- 2021
21. Antibody evasion by the P.1 strain of SARS-CoV-2
- Author
-
Dejnirattisai, Wanwisa, primary, Zhou, Daming, additional, Supasa, Piyada, additional, Liu, Chang, additional, Mentzer, Alexander J., additional, Ginn, Helen M., additional, Zhao, Yuguang, additional, Duyvesteyn, Helen M.E., additional, Tuekprakhon, Aekkachai, additional, Nutalai, Rungtiwa, additional, Wang, Beibei, additional, López-Camacho, César, additional, Slon-Campos, Jose, additional, Walter, Thomas S., additional, Skelly, Donal, additional, Costa Clemens, Sue Ann, additional, Naveca, Felipe Gomes, additional, Nascimento, Valdinete, additional, Nascimento, Fernanda, additional, Fernandes da Costa, Cristiano, additional, Resende, Paola Cristina, additional, Pauvolid-Correa, Alex, additional, Siqueira, Marilda M., additional, Dold, Christina, additional, Levin, Robert, additional, Dong, Tao, additional, Pollard, Andrew J., additional, Knight, Julian C., additional, Crook, Derrick, additional, Lambe, Teresa, additional, Clutterbuck, Elizabeth, additional, Bibi, Sagida, additional, Flaxman, Amy, additional, Bittaye, Mustapha, additional, Belij-Rammerstorfer, Sandra, additional, Gilbert, Sarah C., additional, Carroll, Miles W., additional, Klenerman, Paul, additional, Barnes, Eleanor, additional, Dunachie, Susanna J., additional, Paterson, Neil G., additional, Williams, Mark A., additional, Hall, David R., additional, Hulswit, Ruben J.G., additional, Bowden, Thomas A., additional, Fry, Elizabeth E., additional, Mongkolsapaya, Juthathip, additional, Ren, Jingshan, additional, Stuart, David I., additional, and Screaton, Gavin R., additional
- Published
- 2021
- Full Text
- View/download PDF
22. SARS-CoV-2 B.1.1.7 variant of concern detected in a pet dog and cat after exposure to a person with COVID-19, USA
- Author
-
Hamer, Sarah, primary, Ghai, Ria, additional, Zecca, Italo B., additional, Auckland, Lisa D., additional, Roundy, Christopher M., additional, Davila, Edward, additional, Busselman, Rachel E., additional, Tang, Wendy, additional, Pauvolid-Correa, Alex, additional, Killian, Mary Lea, additional, Jenkins-Moore, Melinda, additional, Torchetti, Mia Kim, additional, Austerman, Suelee Robbe, additional, Lim, Ailam, additional, Akpalu, Yao, additional, Fischer, Rebecca S. B., additional, Behravesh, Casey Barton, additional, and Hamer, Gabriel L., additional
- Published
- 2021
- Full Text
- View/download PDF
23. Antibody evasion by the Brazilian P.1 strain of SARS-CoV-2
- Author
-
Dejnirattisai, Wanwisa, primary, Zhou, Daming, additional, Supasa, Piyada, additional, Liu, Chang, additional, Mentzer, Alexander J., additional, Ginn, Helen M., additional, Zhao, Yuguang, additional, Duyvesteyn, Helen M.E., additional, Tuekprakhon, Aekkachai, additional, Nutalai, Rungtiwa, additional, Wang, Beibei, additional, Paesen, Guido C., additional, López-Camacho, César, additional, Slon-Campos, Jose, additional, Walter, Thomas S., additional, Skelly, Donal, additional, Clemens, Sue Ann Costa, additional, Naveca, Felipe Gomes, additional, Nascimento, Valdinete, additional, Nascimento, Fernanda, additional, da Costa, Cristiano Fernandes, additional, Resende, Paola C., additional, Pauvolid-Correa, Alex, additional, Siqueira, Marilda M., additional, Dold, Christina, additional, Levin, Robert, additional, Dong, Tao, additional, Pollard, Andrew J., additional, Knight, Julian C., additional, Crook, Derrick, additional, Lambe, Teresa, additional, Clutterbuck, Elizabeth, additional, Bibi, Sagida, additional, Flaxman, Amy, additional, Bittaye, Mustapha, additional, Belij-Rammerstorfer, Sandra, additional, Gilbert, Sarah, additional, Carroll, Miles W., additional, Klenerman, Paul, additional, Barnes, Eleanor, additional, Dunachie, Susanna J., additional, Paterson, Neil G., additional, Williams, Mark A., additional, Hall, David R., additional, Hulswit, Ruben J. G., additional, Bowden, Thomas A., additional, Fry, Elizabeth E., additional, Mongkolsapaya, Juthathip, additional, Ren, Jingshan, additional, Stuart, David I., additional, and Screaton, Gavin R., additional
- Published
- 2021
- Full Text
- View/download PDF
24. Taxonomy of the order Bunyavirales: update 2019
- Author
-
Lěi Zhāng, Janusz T. Paweska, S. V. Alkhovsky, Rémi N. Charrel, Jussi Hepojoki, Xiǎoméi Duàn, Chuánwèi Lǚ, Miranda Gilda Jonson, Keita Matsuno, Jessica R. Spengler, Aura R. Garrison, R. O. Resende, Hideki Ebihara, F. Murilo Zerbini, Jens H. Kuhn, Márcio Roberto Teixeira Nunes, Eric Bergeron, Anna Papa, Jin Won Song, Jūn Wáng, Chūn Kòu, Chéng Wáng, Thomas Briese, William Marciel de Souza, Francesco Di Serio, Igor S. Lukashevich, Mark D. Stenglein, Huálín Wáng, George Fú Gāo, Lìyǐng Zhū, Xavier de Lamballerie, Xueping Zhou, Anne Lise Haenni, Dan Liu, Matthew J. Ballinger, Zhìhóng Hú, Lies Laenen, Scott Adkins, Gustavo Palacios, Zhèngyuán Sū, Koray Ergünay, Abulikemu Abudurexiti, Jié Qiáo, Yong-Zhen Zhang, Martin Beer, Piet Maes, Giovanni P. Martelli, Holly R. Hughes, Charles H. Calisher, Juan Carlos de la Torre, Stephan Günther, Yànfāng Zhāng, Boris Klempa, Il-Ryong Choi, Rayapati A. Naidu, Sùróng Sūn, Takahide Sasaya, Bó Wáng, Toufic Elbeaino, Manuela Sironi, Ali Mirazimi, Peter Simmonds, J. Christopher S. Clegg, Jonas Klingström, Amadou A. Sall, Michele Digiaro, Beatriz Navarro, Roger Hewson, Fēi Dèng, Tāo Luò, Marco Marklewitz, Michael A. Drebot, Yújiāng Zhāng, Felicity J. Burt, Nicole Mielke-Ehret, Daniela Alioto, Jìngyuàn Zhāng, Maria S. Salvato, Maria Minutolo, Xiǎohóng Shí, Dennis A. Bente, Shuāng Táng, Taiyun Wei, Sandra Junglen, Stanley A. Langevin, Tatjana Avšič-Županc, Charles F. Fulhorst, Hans Peter Mühlbach, Víctor Romanowski, Massimo Turina, Alex Pauvolid-Corrêa, Martin H. Groschup, Yukio Shirako, Amy J. Lambert, Roy A. Hall, Sheli R. Radoshitzky, Chénchén Cháng, Carol D. Blair, Shū Shěn, Anna E. Whitfield, Michael J. Buchmeier, Jean-Paul Gonzalez, Abulimiti Moming, Dipartimento di Agraria, University of Sassari, Medical School, University of Ljubljana, Institute of Diagnostic Virology (IVD), Friedrich-Loeffler-Institut (FLI), Fundación Instituto Leloir [Buenos Aires], Columbia Mailman School of Public Health, Colorado State University [Fort Collins] (CSU), Unité des Virus Emergents (UVE), Aix Marseille Université (AMU)-Institut de Recherche pour le Développement (IRD)-Institut National de la Santé et de la Recherche Médicale (INSERM), International Rice Research Institute [Philippines] (IRRI), Consultative Group on International Agricultural Research [CGIAR] (CGIAR), The Scripps Research Institute [La Jolla], University of California [San Diego] (UC San Diego), University of California-University of California, Department of Biochemistry and Molecular Biology, University of Rochester [USA], Hacettepe University = Hacettepe Üniversitesi, The University of Texas Medical Branch (UTMB), Conditions et territoires d'émergence des maladies : dynamiques spatio-temporelles de l'émergence, évolution, diffusion/réduction des maladies, résistance et prémunition des hôtes (CTEM), Department of Virology, Bernhard Nocht Institute for Tropical Medicine - Bernhard-Nocht-Institut für Tropenmedizin [Hamburg, Germany] (BNITM), Institut Jacques Monod (IJM (UMR_7592)), Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS), Public Health England [Salisbury] (PHE), Humboldt State University (HSU), Slovak Academy of Science [Bratislava] (SAS), Center for Infectious Medicine, Department of Medicine, Karolinska Institutet, Karolinska University Hospital, Department of Systems Biology, Sandia National Laboratories, Institute for Frontier Materials (IFM), Deakin University [Burwood], Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), University of Bari Aldo Moro (UNIBA), Center for Microbiological Preparedness, Swedish Institute for Infectious Disease Control, Department of Arbovirology and Hemorrhagic Fevers, Instituto Evandro Chagas, Army Medical Research Institute of Infectious Diseases [USA] (USAMRIID), Aristotle University of Thessaloniki, U.S. Army Medical Research Institute of Infectious Diseases, Instituto de Biotecnología y Biología Molecular [La Plata] (IBBM), Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET)-Facultad de Ciencias Exactas [La Plata], Universidad Nacional de la Plata [Argentine] (UNLP)-Universidad Nacional de la Plata [Argentine] (UNLP), Institut Pasteur de Dakar, Réseau International des Instituts Pasteur (RIIP), Divison of Plant Protection, National Agricultural Research Center, National Agricultural Research Center, University of Edinburgh, Centro San Giovanni di Dio, Fatebenefratelli, Brescia (IRCCS), Università degli Studi di Brescia [Brescia], Key Laboratory of Zoological Systematics and Evolution, Chinese Academy of Sciences [Changchun Branch] (CAS)-Institute of Zoology, Southern Crop Protection and Food Research Centre, Agriculture and Agri-Food [Ottawa] (AAFC), Universidade Federal de Vicosa (UFV), State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong (HKU), National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH), National Institutes of Health [Bethesda] (NIH), Viral Zoonosis Research Unit, University of Helsinki, Faculty of Medicine, Medicum, Università degli Studi di Sassari = University of Sassari [Sassari] (UNISS), University of Ljubljana, Columbia University [New York], Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Institut National de la Santé et de la Recherche Médicale (INSERM), The Scripps Research Institute [La Jolla, San Diego], Università degli studi di Bari Aldo Moro = University of Bari Aldo Moro (UNIBA), U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Università degli Studi di Brescia = University of Brescia (UniBs), Agriculture and Agri-Food (AAFC), Universidade Federal de Viçosa = Federal University of Viçosa (UFV), Abudurexiti, A., Adkins, S., Alioto, D., Alkhovsky, S. V., Avsic-Zupanc, T., Ballinger, M. J., Bente, D. A., Beer, M., Bergeron, E., Blair, C. D., Briese, T., Buchmeier, M. J., Burt, F. J., Calisher, C. H., Chang, C., Charrel, R. N., Choi, I. R., Clegg, J. C. S., de la Torre, J. C., de Lamballerie, X., Deng, F., Di Serio, F., Digiaro, M., Drebot, M. A., Duan, X., Ebihara, H., Elbeaino, T., Ergunay, K., Fulhorst, C. F., Garrison, A. R., Gao, G. F., Gonzalez, J. -P. J., Groschup, M. H., Gunther, S., Haenni, A. -L., Hall, R. A., Hepojoki, J., Hewson, R., Hu, Z., Hughes, H. R., Jonson, M. G., Junglen, S., Klempa, B., Klingstrom, J., Kou, C., Laenen, L., Lambert, A. J., Langevin, S. A., Liu, D., Lukashevich, I. S., Luo, T., Lu, C., Maes, P., de Souza, W. M., Marklewitz, M., Martelli, G. P., Matsuno, K., Mielke-Ehret, N., Minutolo, M., Mirazimi, A., Moming, A., Muhlbach, H. -P., Naidu, R., Navarro, B., Nunes, M. R. T., Palacios, G., Papa, A., Pauvolid-Correa, A., Paweska, J. T., Qiao, J., Radoshitzky, S. R., Resende, R. O., Romanowski, V., Sall, A. A., Salvato, M. S., Sasaya, T., Shen, S., Shi, X., Shirako, Y., Simmonds, P., Sironi, M., Song, J. -W., Spengler, J. R., Stenglein, M. D., Su, Z., Sun, S., Tang, S., Turina, M., Wang, B., Wang, C., Wang, H., Wang, J., Wei, T., Whitfield, A. E., Zerbini, F. M., Zhang, J., Zhang, L., Zhang, Y., Zhang, Y. -Z., Zhou, X., Zhu, L., and Kuhn, J. H.
- Subjects
GUAMA ,SPOT-VIRUS ,[SDV]Life Sciences [q-bio] ,Biología ,Bunyaviridae ,DIVERSITY ,cogovirus ,COMPLETE NUCLEOTIDE-SEQUENCE ,Genome, Viral ,bunyavirus ,Biology ,Bunyaviridae / classifica??o ,Article ,CAPIM ,ICTV ,03 medical and health sciences ,Virology ,PHLEBOVIRUS ,Bunyavirales ,MOLECULAR CHARACTERIZATION ,TOSPOVIRUS ,Arenaviridae ,Ratification ,Phylogeny ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,0303 health sciences ,IDENTIFICATION ,030306 microbiology ,CHRYSANTHEMUM ,Arenavirid ,Arenavirus ,General Medicine ,Arbovirus / classifica??o ,Genealogy ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,Taxon ,classification ,Bunyavirad ,[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology ,RNA, Viral ,Taxonomy (biology) ,3111 Biomedicine ,Bunyavirid - Abstract
In February 2019, following the annual taxon ratification vote, the order Bunyavirales was amended by creation of two new families, four new subfamilies, 11 new genera and 77 new species, merging of two species, and deletion of one species. This article presents the updated taxonomy of the order Bunyavirales now accepted by the International Committee on Taxonomy of Viruses (ICTV)., La lista completa de autores puede verse al final del archivo asociado., Instituto de Biotecnologia y Biologia Molecular
25. Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses.
- Author
-
Dejnirattisai W, Huo J, Zhou D, Zahradník J, Supasa P, Liu C, Duyvesteyn HME, Ginn HM, Mentzer AJ, Tuekprakhon A, Nutalai R, Wang B, Dijokaite A, Khan S, Avinoam O, Bahar M, Skelly D, Adele S, Johnson SA, Amini A, Ritter T, Mason C, Dold C, Pan D, Assadi S, Bellass A, Omo-Dare N, Koeckerling D, Flaxman A, Jenkin D, Aley PK, Voysey M, Clemens SAC, Naveca FG, Nascimento V, Nascimento F, Fernandes da Costa C, Resende PC, Pauvolid-Correa A, Siqueira MM, Baillie V, Serafin N, Ditse Z, Da Silva K, Madhi S, Nunes MC, Malik T, Openshaw PJ, Baillie JK, Semple MG, Townsend AR, Huang KA, Tan TK, Carroll MW, Klenerman P, Barnes E, Dunachie SJ, Constantinides B, Webster H, Crook D, Pollard AJ, Lambe T, Paterson NG, Williams MA, Hall DR, Fry EE, Mongkolsapaya J, Ren J, Schreiber G, Stuart DI, and Screaton GR
- Abstract
On the 24
th November 2021 the sequence of a new SARS CoV-2 viral isolate spreading rapidly in Southern Africa was announced, containing far more mutations in Spike (S) than previously reported variants. Neutralization titres of Omicron by sera from vaccinees and convalescent subjects infected with early pandemic as well as Alpha, Beta, Gamma, Delta are substantially reduced or fail to neutralize. Titres against Omicron are boosted by third vaccine doses and are high in cases both vaccinated and infected by Delta. Mutations in Omicron knock out or substantially reduce neutralization by most of a large panel of potent monoclonal antibodies and antibodies under commercial development. Omicron S has structural changes from earlier viruses, combining mutations conferring tight binding to ACE2 to unleash evolution driven by immune escape, leading to a large number of mutations in the ACE2 binding site which rebalance receptor affinity to that of early pandemic viruses.- Published
- 2021
- Full Text
- View/download PDF
Catalog
Books, media, physical & digital resources
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.