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1. Two-inlet lagoon systems: Interaction between basins and effects on tidal prisms.

Author

Petti, M., Bosa, S., and Pascolo, S.

Subjects
COASTAL engineering, HARMONIC analysis (Mathematics), LAGOONS, NONLINEAR systems, PRISMS, TIDAL basins
Abstract

In a lagoon basin, the tidal prism is related to the section of its inlet by a simple monomial relationship [L. J. LeConte, "Discussion on the paper, 'notes on the improvement of river and harbor outlets in the United States,' by D. A. Watt." Trans. ASCE 55, 306–308 (1905); M. P. O'Brien, "Estuary tidal prism related to entrance areas," Civil Eng. 1(8), 738–739 (1931); and J. T. Jarrett, Tidal Prism - Inlet Area Relationships (Coastal Engineering Research Center, US Army Corps of Engineers, Fort Belvoir, VA, 1976)]. Although it is not dimensionally correct and there are sophisticated models in two or three dimensions, this relationship is widely used because of its simplicity. Having a simple relationship can be very important, especially when it is necessary to make quick, albeit approximate, evaluations. To maintain this simplicity, the same monomial relationship is often used in multi-inlet lagoons, even if the initial assumptions are not fully met. Another difficulty in applying a monomial relationship to a multi-inlet lagoon is the definition of the area of each basin. In this paper, we propose a simple Eulerian, hydrodynamic, one-dimensional approach based on the dynamic response of a nonlinear harmonic system and a harmonic analysis of the interaction between two basins in a lagoon system. With such an approach, the definition of the basin surface is overcome simply by working on topographic control basins. The study leads to the definition of a relatively simple relationship for the estimation of tidal prisms, while maintaining the flexibility of a monomial relationship. If the geometrical characteristics and the bottom friction of the inlet channel, the topographic surface of the basins and the amplitude of the tide in the open sea are known, this relationship can be used to estimate the tidal prism in individual basins. The application of this relationship to two-dimensional numerical cases and real multi-inlet lagoons shows good agreement with experimental data. [ABSTRACT FROM AUTHOR]

Published
2024
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5. Boost of innate immunity cytokines as biomarkers of response to extracorporeal photopheresis in leukemic cutaneous T-cell lymphoma patients

Author

Tsai, YC, primary, Schlaepfer, T, additional, Ignatova, D, additional, Chang, YT, additional, Valaperti, A, additional, Amarov, B, additional, Blanchard, G, additional, Boyman, O, additional, Maiwald, M, additional, Hoetzenecker, W, additional, Pascolo, S, additional, Fassnacht, C, additional, Iselin, C, additional, Guenova, E, additional, and Bobrowicz, M, additional

Published
2022
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7. Does duration of untreated illness impact long-term outcome in obsessive-compulsive disorder?

Author

Cipolla, S., Catapano, P., Pascolo, S., Luciano, M., Sampogna, G., Perris, F., Giallonardo, V., Del Vecchio, V., Fabrazzo, M., Fiorillo, A., and Catapano, F.

Subjects
ONLINE databases, SCHIZOPHRENIA, OBSESSIVE-compulsive disorder, PEOPLE with schizophrenia, MENTAL illness
Abstract

Introduction: The time period between the onset of a mental disorder and its first adequate treatment (duration of untreated illness - DUI) influence long-term prognosis and outcome in patients with severe mental disorders. The relationship between DUI and outcome was originally found in people affected by schizophrenia spectrum disorders, however in patients with Obsessive-Compulsive Disorder (OCD) DUI is significantly longer compared with that of patients with other severe mental disorders, such as schizophrenia and bipolar disorder. Objectives: Aims of the present study is to assess the impact of DUI on long-term outcomes in OCD patients across published studies. Methods: A systematic review was carried out by selecting relevant articles on the topic present in three common on-line databases, such as PubMed, APA PsycInfo, and Scopus, up to June 2023. Results: Among included studies, DUI ranged from 7,0±8,5 to 20,9±11,2 years. Patients reporting a longer DUI have a poor long-term outcome, in terms of greater symptom severity and lower level of treatment response, whether pharmacological treatment or psychotherapy or a combination of these two. This is particularly true when the onset of the disease is insidious and subthreshold. However, there are severe early-onset forms of OCD in which the request for help is anticipated due to the severity of the symptoms, the DUI is shorter, but the prognosis is still negative. Conclusions: The present review confirms that longer DUI has a negative impact on the long-term outcome of patients with OCD. Furthermore, it is reasonable to hypothesize that cultural factors, such as the perception of the disease and the ability to access treatment, may result in a prolongation of the DUI. All these elements cannot be evaluated in our review due to the paucity of studies on the topic. Future studies could be useful to better understand the causes of a longer DUI, to guide and to promote the dissemination of early interventions with a specific focus on OCD symptoms. Disclosure of Interest: None Declared [ABSTRACT FROM AUTHOR]

Published
2024
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9. Protamine for RNA Transfection: From Heparin Antagonist to RNA Delivery

Author

Frei J, Jarzebska Nt, Mellett M, Pascolo S, and Kuendig Tm

Subjects
biology, Chemistry, business.industry, allergology, Antagonist, Cancer therapy, RNA, Transfection, Heparin, Pharmacology, Protamine, Text mining, medicine, biology.protein, RNA transfection, business, medicine.drug
Abstract

Protamine is a natural cationic peptide mixture mostly known as a drug for the neutralization of heparin and as a compound in formulations of slow-release insulin. Protamine is also used for cellular delivery of nucleic acids due to opposite charge-driven coupling. This year marks60 years since the first use of Protamine as a transfection enhancement agent. Since then, Protamine has been broadly used as a stabilization agent for RNA delivery. It has also been involved in several compositions for RNA-based vaccinations in clinical development. Protamine stabilization of RNA shows double functionality: it not only protects RNA from degradation within biological systems, but also enhances penetration into cells. A Protamine-based RNA delivery system is a flexible and versatile platform that can be adjusted according to therapeutic goals: fused with targeting antibodies for precise delivery, digested into a cell penetrating peptide for better transfection efficiency or not-covalently mixed with functional polymers. This manuscript gives an overview of the strategies employed in protamine-based RNA delivery, including the optimization of the nucleic acid’s stability and translational efficiency, as well as the regulation of its immunostimulatory properties from early studies to recent developments.

Published
2021

15. How to manage work-related stress in healthcare professionals: organizational and individual interventions.

Author

Catapano, P., Luciano, M., Cipolla, S., Pascolo, S., Sampogna, G., Perris, F., Catapano, F., and Fiorillo, A.

Subjects
HEALTH facilities, MEDICAL personnel, MENTAL illness, COGNITIVE therapy, RELAXATION techniques
Abstract

Introduction: Workplaces can be source of significant stress for employees, leading to a series of mental health problems, such as burnout syndrome. Healthcare professionals and other helping professions are especially vulnerable to work-related stress. Objectives: The aim of the present review is to assess available intervention aiming at improving work-related stress symptoms. Methods: We conducted a thorough search of relevant articles on PubMed, APA PsycInfo, and Scopus databases, using specific keywords such as "occupational stress," "stress," "anxiety," "depression," "health personnel," "health care facilities, manpower and services," "prevention," and "control." Results: Although significant methodological heterogeneity has been found among studies, regarding assessment tools, target population, and intervention types, we can still draw some satisfactory results. Healthcare professionals have access to various interventions to manage work-related stress symptoms, which can be classified into three categories: 1) individual cognitive-behavioral therapy approaches, 2) relaxation techniques at the individual level, and 3) organizational-level interventions. Mindfulness techniques, relaxation techniques, emotional freedom techniques, and integrated interventions have demonstrated effectiveness in alleviating work-related stress. Conclusions: To prevent work-related stress among healthcare professionals, interventions should be targeted towards specific categories of healthcare workers based on factors such as age, tasks, and patient types. Well-structured and reliable randomized controlled trials focusing on the most promising interventions, such as mindfulness, need to be carried out in larger samples and with a solid methodology in order to confirm these evidences. Disclosure of Interest: None Declared [ABSTRACT FROM AUTHOR]

Published
2024
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17. 88MO T-cell responses induced by an individualized neoantigen specific immune therapy in post (neo)adjuvant patients with triple negative breast cancer

Author

Schmidt, M., primary, Vogler, I., additional, Derhovanessian, E., additional, Omokoko, T., additional, Godehardt, E., additional, Attig, S., additional, Cortini, A., additional, Newrzela, S., additional, Grützner, J., additional, Bolte, S., additional, Langer, D., additional, Eichbaum, M., additional, Lindman, H., additional, Pascolo, S., additional, Schneeweiss, A., additional, Sjöblom, T., additional, Türeci, Ö., additional, and Sahin, U., additional

Published
2020
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19. Mutanome engineered RNA immuno-therapy (MERIT) for patients with triple negative breast cancer (TNBC)

Author

Heesen, L., primary, Frenzel, K., additional, Bolte, S., additional, Bukur, V., additional, Diken, M., additional, Derhovanessian, E., additional, Kreiter, S., additional, Kuhn, A., additional, Kühlcke, K., additional, Löwer, M., additional, Lindman, H., additional, Pascolo, S., additional, Schmidt, M., additional, Schneeweiss, A., additional, Sjöblom, T., additional, Thielemans, K., additional, Zitvogel, L., additional, Türeci, Ö, additional, and Sahin, U., additional

Published
2018
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20. Mutanome engineered RNA immuno-therapy (MERIT) for patients with triple negative breast cancer

Author

Frenzel, K., primary, Heesen, L., additional, Bolte, S., additional, Bukur, V., additional, Diken, M., additional, Derhovanessian, E., additional, Kreiter, S., additional, Kuhn, A., additional, Kuehlcke, K., additional, Löwer, M., additional, De Greve, J., additional, Lindman, H., additional, Pascolo, S., additional, Schmidt, M., additional, Schneeweiss, A., additional, Sjöblom, T., additional, Thielemans, K., additional, Zitvogel, L., additional, Türeci, Ö, additional, and Sahin, U., additional

Published
2017
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25. The Yeast Genome Directory

Author

Goffeau, A., Aert, R., Agostini-Carbone, M. L., Ahmed, A., Aigle, M., Alberghina, L., Albermann, K., Albers, M., Aldea, M., Alexandraki, D., Aljinovic, G., Allen, E., Alt-Mörbe, J., André, B., Andrews, S., Ansorge, W., Antoine, G., Anwar, R., Aparicio, A., Araujo, R., Arino, J., Arnold, F., Arroyo, J., Aviles, E., Backes, U., Baclet, M. C., Badcock, K., Bahr, A., Baladron, V., Ballesta, J. P. G., Bankier, A. T., Banrevi, A., Bargues, M., Baron, L., Barreiros, T., Barrell, B. G., Barthe, C., Barton, A. B., Baur, A., Bécam, A.-M., Becker, A., Becker, I., Beinhauer, J., Benes, V., Benit, P., Berben, G., Bergantino, E., Bergez, P., Berno, A., Bertani, I., Biteau, N., Bjourson, A. J., Blöcker, H., Blugeon, C., Bohn, C., Boles, E., Bolle, P. A., Bolotin-Fukuhara, M., Bordonné, R., Boskovic, J., Bossier, P., Botstein, D., Bou, G., Bowman, S., Boyer, J., Brandt, P., Brandt, T., Brendel, M., Brennan, T., Brinkman, R., Brown, A., Brown, A. J. P., Brown, D., Brückner, M., Bruschi, C. V., Buhler, J. M., Buitrago, M. J., Bussereau, F., Bussey, H., Camasses, A., Carcano, C., Carignani, G., Carpenter, J., Casamayor, A., Casas, C., Castagnoli, L., Cederberg, H., Cerdan, E., Chalwatzis, N., Chanet, R., Chen, E., Chéret, G., Cherry, J. M., Chillingworth, T., Christiansen, C., Chuat, J.-C., Chung, E., Churcher, C., Churcher, C. M., Clark, M. W., Clemente, M. L., Coblenz, A., Coglievina, M., Coissac, E., Colleaux, L., Connor, R., Contreras, R., Cooper, J., Copsey, T., Coster, F., Coster, R., Couch, J., Crouzet, M., Cziepluch, C., Daignan-Fornier, B., Dal Paro, F., Dang, D. V., D’Angelo, M., Davies, C. J., Davis, K., Davis, R. W., De Antoni, A., Dear, S., Dedman, K., Defoor, E., De Haan, M., Delaveau, Th., Del Bino, S., Delgado, M., Delius, H., Delneri, D., Del Rey, F., Demolder, J., Démolis, N., Devlin, K., de Wergifosse, P., Dietrich, F. S., Ding, H., Dion, C., Dipaolo, T., Doignon, F., Doira, C., Domdey, H., Dover, J., Du, Z., Dubois, E., Dujon, B., Duncan, M., Durand, P., Düsterhöft, A., Düsterhus, S., Eki, T., El Bakkoury, M., Eide, L. G., Entian, K.-D., Eraso, P., Erdmann, D., Erfle, H., Escribano, V., Esteban, M., Fabiani, L., Fabre, F., Fairhead, C., Fartmann, B., Favello, A., Faye, G., Feldmann, H., Fernandes, L., Feroli, F., Feuermann, M., Fiedler, T., Fiers, W., Fleig, U. N., Flöth, M., Fobo, G. M., Fortin, N., Foury, F., Francingues-Gaillard, M. C., Franco, L., Fraser, A., Friesen, J.D., Fritz, C., Frontali, L., Fukuhara, H., Fulton, L., Fuller, L. J., Gabel, C., Gaillardin, C., Gaillon, L., Galibert, F., Galisson, F., Galland, P., Gamo, F.-J., Gancedo, C., Garcia-Cantalejo, J. M., García-Gonzalez, M. I., Garcia-Ramirez, J. J., García-Saéz, M., Gassenhuber, H., Gatius, M., Gattung, S., Geisel, C., Gent, M. E., Gentles, S., Ghazvini, M., Gigot, D., Gilliquet, V., Glansdorff, N., Gómez-Peris, A., Gonzaléz, A., Goulding, S. E., Granotier, C., Greco, T., Grenson, M., Grisanti, P., Grivell, L. A., Grothues, D., Gueldener, U., Guerreiro, P., Guzman, E., Haasemann, M., Habbig, B., Hagiwara, H., Hall, J., Hallsworth, K., Hamlin, N., Hand, N. J., Hanemann, V., Hani, J., Hankeln, T., Hansen, M., Harris, D., Harris, D. E., Hartzell, G., Hatat, D., Hattenhorst, U., Hawkins, J., Hebling, U., Hegemann, J., Hein, C., Hennemann, A., Hennessy, K., Herbert, C. J., Hernandez, K., Hernando, Y., Herrero, E., Heumann, K., Heuss- Neitzel, D., Hewitt, N., Hiesel, R., Hilbert, H., Hilger, F., Hillier, L., Ho, C., Hoenicka, J., Hofmann, B., Hoheisel, J., Hohmann, S., Hollenberg, C. P., Holmstrøm, K., Horaitis, O., Horsnell, T. S., Huang, M.-E., Hughes, B., Hunicke-Smith, S., Hunt, S., Hunt, S. E., Huse, K., Hyman, R. W., Iborra, F., Indge, K. J., Iraqui Houssaini, I., Isono, K., Jacq, C., Jacquet, M., Jacquier, A., Jagels, K., Jäger, W., James, C. M., Jauniaux, J. C., Jia, Y., Jier, M., Jimenez, A., Johnson, D., Johnston, L., Johnston, M., Jones, M., Jonniaux, J.-L., Kaback, D. B., Kallesøe, T., Kalman, S., Kalogeropoulos, A., Karpfinger-Hartl, L., Kashkari, D., Katsoulou, C., Kayser, A., Kelly, A., Keng, T., Keuchel, H., Kiesau, P., Kirchrath, L., Kirsten, J., Kleine, K., Kleinhans, U., Klima, R., Komp, C., Kordes, E., Korol, S., Kötter, P., Krämer, C., Kramer, B., Kreisl, P., Kucaba, T., Kuester, H., Kurdi, O., Laamanen, P., Lafuente, M. J., Landt, O., Lanfranchi, G., Langston, Y., Lashkari, D., Latreille, P., Lauquin, G., Le, T., Legrain, P., Legros, Y., Lepingle, A., Lesveque, H., Leuther, H., Lew, H., Lewis, C., Li, Z. Y., Liebl, S., Lin, A., Lin, D., Logghe, M., Lohan, A. J. E., Louis, E. J., Lucchini, G., Lutzenkirchen, K., Lyck, R., Lye, G., Maarse, A. C., Maat, M. J., Macri, C., Madania, A., Maftahi, M., Maia e Silva, A., Maillier, E., Mallet, L., Mannhaupt, G., Manus, V., Marathe, R., Marck, C., Marconi, A., Mardis, E., Martegani, E., Martin, R., Mathieu, A., Maurer, C. T. C., Mazón, M. J., Mazzoni, C., McConnell, D., McDonald, S., McKee, R. A., McReynolds, A. D. K., Melchioretto, P., Menezes, S., Messenguy, F., Mewes, H. W., Michaux, G., Miller, N., Minenkova, O., Miosga, T., Mirtipati, S., Möller-Rieker, S., Möstl, D., Molemans, F., Monnet, A., Monnier, A-L., Montague, M. A., Moro, M., Mosedale, D., Möstl, D., Moule, S., Mouser, L., Murakami, Y., Müller-Auer, S., Mulligan, J., Murphy, L., Muzi Falconi, M., Naitou, M., Nakahara, K., Namath, A., Nasr, F., Navas, L., Nawrocki, A., Nelson, J., Nentwich, U., Netter, P., Neu, R., Newlon, C. S., Nhan, M., Nicaud, J.-M., Niedenthal, R. K., Nombela, C., Noone, D., Norgren, R., Nußbaumer, B., Obermaier, B., Odell, C., Öfner, P., Oh, C., Oliver, K., Oliver, S. G., Ouellette, B. F., Ozawa, M., Paces, V., Pallier, C., Pandolfo, D., Panzeri, L., Paoluzi, S., Parle-Mcdermott, A. G., Pascolo, S., Patricio, N., Pauley, A., Paulin, L., Pearson, B. M., Pearson, D., Peluso, D., Perea, J., Pérez-Alonso, M., Pérez-Ortin, J. E., Perrin, A., Petel, F. X., Pettersson, B., Pfeiffer, F., Philippsen, P., Piérard, A., Piravandi, E., Planta, R. J., Plevani, P., Poch, O., Poetsch, B., Pohl, F. M., Pohl, T. M., Pöhlmann, R., Poirey, R., Portetelle, D., Portillo, F., Potier, S., Proft, M., Prydz, H., Pujol, A., Purnelle, B., Puzos, V., Rajandream, M. A., Ramezani Rad, M., Rasmussen, S. W., Raynal, A., Rechmann, S., Remacha, M., Revuelta, J. L., Rice, P., Richard, G-F., Richterich, P., Rieger, M., Rifken, L., Riles, L., Rinaldi, T., Rinke, M., Roberts, A. B., Roberts, D., Rodriguez, F., Rodriguez-Belmonte, E., Rodriguez-Pousada, C., Rodriguez-Torres, A. M., Rose, M., Rossau, R., Rowley, N., Rupp, T., Ruzzi, M., Saeger, W., Saiz, J. E., Saliola, M., Salom, D., Saluz, H. P., Sánchez-Perez, M., Santos, M. A., Sanz, E., Sanz, J. E., Saren, A.-M., Sartorello, F., Sasanuma, M., Sasanuma, S-I., Scarcez, T., Schaaf-Gerstenschläger, I., Schäfer, B., Schäfer, M., Scharfe, M., Scherens, B., Schroff, N., Sen-Gupta, M., Shibata, T., Schmidheini, T., Schmidt, E. R., Schneider, C., Scholler, P., Schramm, S., Schreer, A., Schröder, M., Schwager, C., Schwarz, S., Schwarzlose, C., Schweitzer, B., Schweizer, M., Sdicu, A-M., Sehl, P., Sensen, C., Sgouros, J. G., Shogren, T., Shore, L., Shu, Y., Skala, J., Skelton, J., Slonimski, P. P., Smit, P. H. M., Smith, V., Soares, H., Soeda, E., Soler-Mira, A., Sor, F., Soriano, N., Souciet, J. L., Soustelle, C., Spiegelberg, R., Stateva, L. I., Steensma, H. Y., Stegemann, J., Steiner, S., Stellyes, L., Sterky, F., Storms, R. K., St. Peter, H., Stucka, R., Taich, A., Talla, E., Tarassov, I., Tashiro, H., Taylor, P., Teodoru, C., Tettelin, H., Thierry, A., Thireos, G., Tobiasch, E., Tovan, D., Trevaskis, E., Tsuchiya, Y., Tzermia, M., Uhlen, M., Underwood, A., Unseld, M., Urbanus, J. H. M., Urrestarazu, A., Ushinsky, S., Valens, M., Valle, G., Van Broekhoven, A., Vandenbol, M., Van Der Aart, Q. J. M., Van Der Linden, C. G., Van Dyck, L., Vanoni, M., Van Vliet-Reedijk, J. C., Vassarotti, A., Vaudin, M., Vaughan, K., Verhasselt, P., Vetter, I., Vierendeels, F., Vignati, D., Vilela, C., Vissers, S., Vleck, C., Vo, D. T., Vo, D. H., Voet, M., Volckaert, G., Von Wettstein, D., Voss, H., Vreken, P., Wagner, G., Walsh, S. V., Wambutt, R., Wang, H., Wang, Y., Warmington, J. R., Waterston, R., Watson, M. D., Weber, N., Wedler, E., Wedler, H., Wei, Y., Whitehead, S., Wicksteed, B. L., Wiemann, S., Wilcox, L., Wilson, C., Wilson, R., Winant, A., Winnett, E., Winsor, B., Wipfli, P., Wölfl, S., Wohldman, P., Wolf, K., Wolfe, K. H., Wright, L. F., Wurst, H., Xu, G., Yamasaki, M., Yelton, M. A., Yokohama, K., Yoshikawa, A., Yuping, S., Zaccaria, P., Zagulski, M., Zimmermann, F. K., Zimmermann, J., Zimmermann, M., Zhong, W-W., Zollner, A., and Zumstein, E.

Published
1997
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37. Complete DNA sequence of yeast chromosome XI

Author

Dujon, B., primary, Alexandraki, D., additional, André, B., additional, Ansorge, W., additional, Baladron, V., additional, Ballesta, J. P. G., additional, Banrevi, A., additional, Bolle, P. A., additional, Bolotin-Fukuhara, M., additional, Bossier, P., additional, Bou, G., additional, Boyer, J., additional, Buitrago, M. J., additional, Cherét, G., additional, Colleaux, L., additional, Dalgnan-Fornier, B., additional, del Rey, F., additional, Dion, C., additional, Domdey, H., additional, Düsterhöft, A., additional, Düsterhus, S., additional, Entian, K.-D., additional, Erfle, H., additional, Esteban, P. F., additional, Feldmann, H., additional, Fernandes, L., additional, Fobo, G. M., additional, Fritz, C., additional, Fukuhara, H., additional, Gabel, C., additional, Gaillon, L., additional, Carcia-Cantalejo, J. M., additional, Garcia-Ramirez, J. J., additional, Gent, M. E., additional, Ghazvini, M., additional, Goffeau, A., additional, Gonzaléz, A., additional, Grothues, D., additional, Guerreiro, P., additional, Hegemann, J., additional, Hewitt, N., additional, Hilger, F., additional, Hollenberg, C. P., additional, Horaitis, O., additional, Indge, K. J., additional, Jacquier, A., additional, James, C. M., additional, Jauniaux, J. C., additional, Jimenez, A., additional, Keuchel, H., additional, Kirchrath, L., additional, Kleine, K., additional, Kötter, P., additional, Legrain, P., additional, Liebl, S., additional, Louis, E. J., additional, Maia e Silva, A., additional, Marck, C., additional, Monnier, A.-L., additional, Möstl, D., additional, Müller, S., additional, Obermaier, B., additional, Oliver, S. G., additional, Pallier, C., additional, Pascolo, S., additional, Pfeiffer, F., additional, Philippsen, P., additional, Planta, R. J., additional, Pohl, F. M., additional, Pohl, T. M., additional, Pöhlmann, R., additional, Portetelle, D., additional, Purnelle, B., additional, Puzos, V., additional, Rad, M. Ramezani, additional, Rasmussen, S. W., additional, Remacha, M., additional, Revuelta, J. L., additional, Richard, G.-F., additional, Rieger, M., additional, Rodrigues-Pousada, C., additional, Rose, M., additional, Rupp, T., additional, Santos, M. A., additional, Schwager, C., additional, Sensen, C., additional, Skala, J., additional, Soares, H., additional, Sor, F., additional, Stegemann, J., additional, Tettelin, H., additional, Thierry, A., additional, Tzermia, M., additional, Urrestarazu, L. A., additional, van Dyck, L., additional, van Vliet-Reedijk, J. C., additional, Valens, M., additional, Vandenbo, M., additional, Vilela, C., additional, Vissers, S., additional, von Wettstein, D., additional, Voss, H., additional, Wiemann, S., additional, Xu, G., additional, Zimmermann, J., additional, Haasemann, M., additional, Becker, I., additional, and Mewes, H. W., additional

Published
1994
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38. Clearance of Chlamydia pneumoniae Infection in H-2 Class I–/– Human Leucocyte Antigen-A2.1 Monochain Transgenic Mice.

Author

Tammiruusu, A., Haveri, A., Pascolo, S., Lahesmaa, R., Stevanovic, S., Rammensee, H.-G., Sarvas, M., Puolakkainen, M., and Vuola, J. M.

Subjects
CHLAMYDOPHILA pneumoniae infections, LABORATORY mice, LYMPHOCYTES, LEUCOCYTES, IMMUNOLOGY
Abstract

CD8+ T cells have been suggested to play an important role in protective immunity against pulmonary Chlamydia pneumoniae infection in mice. Moreover, several classical major histocompatibility complex class I – restricted cytotoxic CD8+ T lymphocytes (CTL) specific for C. pneumoniae– derived peptides have been identified. Here, we studied the outcome of C. pneumoniae infection in human leucocyte antigen (HLA)-A2.1 transgenic mice (HHD mice) that are only able to express a classical human class I molecule (HLA-A2.1). C. pneumoniae infection was self-restricted in HHD mice which were able to develop specific immune responses and a protective immunity against a subsequent rechallenge in a manner comparable to wildtype mice. Furthermore, accumulation of functional and C. pneumoniae-specific T cells to the site of infection was detected after challenge. Antigen processing and HLA-A2.1-dependent presentation was studied by immunizing the HHD mice with chlamydial outer protein N (CopN). Isolation of a peptide-specific CTL line from the CopN-immunized mice suggests that the HLA-A2.1 molecule can support the development of CTL response against a chlamydial protein in mice. These findings suggest that the transgenic mouse model can be used for further characterization of the HLA-A2.1-restricted CD8+ T-cell response during C. pneumoniae infection and for identification of CD8 epitopes from chlamydial antigens. [ABSTRACT FROM AUTHOR]

Published
2005
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39. Hydrodynamic wave effects on the river Delta: An efficient 2HD numerical model

Author

Petti, M., Silvia Bosa, Pascolo, S., and Lubrano, F.

Subjects
bottom shear stress, jet dynamics, radiation stress, spectral model, hydrodynamic model, jet dynamics, radiation stress, bottom shear stress, current-wave interaction, numerical model, hydrodynamic model, spectral model, numerical model, current-wave interaction

40. Autoreactive napsin A-specific T cells are enriched in lung tumors and inflammatory lung lesions during immune checkpoint blockade

Author

Berner, F, primary, Bomze, D, additional, Lichtensteiger, C, additional, Walter, V, additional, Niederer, R, additional, Ali, OH, additional, Wyss, N, additional, Bauer, J, additional, Freudenmann, LK, additional, Marcu, A, additional, Wolfschmitt, E, additional, Haen, S, additional, Gross, T, additional, Abdou, M, additional, Diem, S, additional, Knöpfli, S, additional, Sinnberg, T, additional, Hofmeister, K, additional, Cheng, H, additional, Toma, M, additional, Klümper, N, additional, Purde, M, additional, Pop, OT, additional, Jochum, A, additional, Pascolo, S, additional, Joerger, M, additional, Früh, M, additional, Jochum, W, additional, Rammensee, H, additional, Läubli, H, additional, Hölzel, M, additional, Neefjes, J, additional, Walz, J, additional, and Flatz, L, additional

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44. BioIns-O-10 - Boost of innate immunity cytokines as biomarkers of response to extracorporeal photopheresis in leukemic cutaneous T-cell lymphoma patients.

Author

Tsai, YC, Schlaepfer, T, Ignatova, D, Chang, YT, Valaperti, A, Amarov, B, Blanchard, G, Boyman, O, Maiwald, M, Hoetzenecker, W, Pascolo, S, Fassnacht, C, Iselin, C, Guenova, E, and Bobrowicz, M

Subjects
*NATURAL immunity, *CYTOKINES, *LEUKEMIA, *CONFERENCES & conventions, *PHOTOCHEMOTHERAPY, *TUMOR markers, *T-cell lymphoma
Published
2022
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45. On the tidal prism: The roles of basin extension, bottom friction and inlet cross-section

Author

Sara Pascolo, Marco Petti, Nadia Busetto, Silvia Bosa, Petti, M., Pascolo, S., Bosa, S., and Busetto, N.

Subjects
Tidal inlet, A–P relationship, Back-barrier basin, Bottom friction, Equilibrium cross-section, Tidal prism, 010504 meteorology & atmospheric sciences, 0208 environmental biotechnology, Ocean Engineering, Geometry, 02 engineering and technology, Structural basin, 01 natural sciences, lcsh:Oceanography, Cross section (physics), lcsh:VM1-989, lcsh:GC1-1581, Sensitivity (control systems), 0105 earth and related environmental sciences, Water Science and Technology, Civil and Structural Engineering, geography, geography.geographical_feature_category, lcsh:Naval architecture. Shipbuilding. Marine engineering, Inlet, 020801 environmental engineering, Section (archaeology), Prism, Geology, Communication channel
Abstract

The prism of the Lignano tidal inlet was approximately constant over the last forty years, although the section width has halved. This has led to questions concerning the factors that most influence the tidal prism, and on the applicability of the well-known A&ndash, P relationship. A conceptual scheme of the sea&ndash, channel&ndash, lagoon system has been used to perform a sensitivity analysis of different parameters that characterize both the basin and the inlet cross-section. A 2D hydrodynamic model has been applied to evaluate the prism and compare it to the one derived by a static method, which is the basis of the analytical derivation of the A&ndash, P linkage. Three regimes have been found in the prism variability as a function of the basin extension: a linear static regime between prism and basin area, an asymptotic regime in which the prism depends only on the basin bottom friction, and an intermediate one. In addition, the roles of the inlet and channel sizes on the prism value have been investigated. The results, compared to the empirical relationships between the prism and the inlet cross-section, show that a variation in the cross-sectional area does not always corresponds to a change in tidal prism.

Published
2021

46. Mass spectrometric identification of an HLA-A*0201 epitope from Plasmodium falciparum MSP-1

Author

Steve Pascolo, Claudia Lemmel, Jean-Philippe Carralot, Stefan Stevanovic, University of Zurich, and Pascolo, S

Subjects
Plasmodium falciparum, Immunology, Epitopes, T-Lymphocyte, 610 Medicine & health, Antigens, Protozoan, Mice, Transgenic, Human leukocyte antigen, Mass Spectrometry, Epitope, Mice, Antigen, HLA-A2 Antigen, parasitic diseases, MHC class I, Animals, Humans, Immunology and Allergy, Protein Interaction Domains and Motifs, Malaria, Falciparum, Merozoite surface protein, Chromatography, High Pressure Liquid, Merozoite Surface Protein 1, 2403 Immunology, biology, Linear epitope, General Medicine, biology.organism_classification, Virology, Molecular biology, CTL, 10032 Clinic for Oncology and Hematology, 2723 Immunology and Allergy, biology.protein, Peptides, Epitope Mapping, HeLa Cells, Protein Binding, T-Lymphocytes, Cytotoxic
Abstract

Cytotoxic T lymphocytes (CTL) directed against Plasmodium falciparum-derived antigens were shown to play an important role for the protection against malaria. Although several CTL epitopes have been identified from P. falciparum sporozoite-derived antigens, none has been described for the merozoite form. Since the merozoite surface protein (MSP)-1 is a known target of the immune response, we focused on this protein to identify HLA-A*0201-associated epitopes. Using our mass spectrometry-based method [the 'predict-calibrate-detect' (PCD) approach], we were able to identify an MSP-1-derived epitope in the peptide mixture naturally associated with HLA-A*0201 molecules purified from an MSP-1-expressing cell line. CTLs against this epitope were generated from HLA-A*0201 monochain transgenic mice (HHD). They specifically killed MSP-1-expressing HLA-A2-positive target cells. Thus, we describe here the first MHC class I epitope from the merozoite form of P. falciparum. This epitope can be used as a tool for the immunomonitoring of natural or vaccine-induced CTL immune responses against malaria and could eventually be proposed as a component of an anti-malaria peptide-based vaccine.

Published
2008

47. Gemcitabine depletes regulatory T-cells in human and mice and enhances triggering of vaccine-specific cytotoxic T-cells

Author

Lorna, Rettig, Samuel, Seidenberg, Iana, Parvanova, Panagiotis, Samaras, Alessandra, Curioni, Alexander, Knuth, Steve, Pascolo, University of Zurich, and Pascolo, S

Subjects
CD4-Positive T-Lymphocytes, Male, Antimetabolites, Antineoplastic, Cancer Research, medicine.drug_class, medicine.medical_treatment, 610 Medicine & health, Cancer Vaccines, Deoxycytidine, T-Lymphocytes, Regulatory, Antimetabolite, Mice, Antigen, Antigens, Neoplasm, Neoplasms, medicine, Animals, Humans, Cytotoxic T cell, 1306 Cancer Research, Mice, Inbred BALB C, Chemotherapy, business.industry, Membrane Proteins, Cancer, T lymphocyte, medicine.disease, Gemcitabine, Vaccination, Oncology, Immunology, 10032 Clinic for Oncology and Hematology, Cancer research, Female, 2730 Oncology, business, T-Lymphocytes, Cytotoxic, medicine.drug
Abstract

Particle-mediated epidermal delivery (PMED) is a potent genetic vaccination method. However, a recent report found PMED only poorly and infrequently triggered antigen-specific cytotoxic T-cells in cancer patients. Here, we show that injection of the chemotherapeutic drug Gemcitabine in mice results in improvement of the efficacy of subsequent PMED vaccination against NY-ESO-1. We found in mice and in cancer patients that administration of Gemcitabine induces a transient reduction in the percentage of regulatory T-cells among CD4-positive cells. The higher relative sensitivity of regulatory T-cells compared to other CD4-positive T-cells toward cytostatic drugs can be linked to the higher frequency of proliferating cells in the regulatory compartment compared to the nonregulatory CD4-compartment in healthy people and cancer patients. Thus, by affecting regulatory T-cells more than other lymphocyte subsets, chemotherapeutic agents can create a transient hyperimmunoreactive window. Such a window would provide an ideal timepoint to administer a vaccine expected to induce a therapeutically relevant anticancer cytotoxic T-cell response.

Published
2011

48. The form of NY-ESO-1 antigen has an impact on the clinical efficacy of anti-tumor vaccination

Author

Steve Pascolo, Lorna Rettig, Alexander Knuth, Iana Parvanova, University of Zurich, and Pascolo, S

Subjects
medicine.medical_treatment, 3400 General Veterinary, 610 Medicine & health, Major histocompatibility complex, Cancer Vaccines, Epitope, Mice, Antigen, 2400 General Immunology and Microbiology, Neoplasms, MHC class I, medicine, Vaccines, DNA, Animals, Homeodomain Proteins, Mice, Inbred BALB C, General Veterinary, General Immunology and Microbiology, biology, Vaccination, Public Health, Environmental and Occupational Health, Histocompatibility Antigens Class II, 2739 Public Health, Environmental and Occupational Health, 2725 Infectious Diseases, Virology, Mice, Inbred C57BL, Infectious Diseases, Treatment Outcome, 1313 Molecular Medicine, Immunology, 10032 Clinic for Oncology and Hematology, Vaccines, Subunit, biology.protein, Molecular Medicine, Cancer vaccine, Immunotherapy, NY-ESO-1, Adjuvant, T-Lymphocytes, Cytotoxic
Abstract

Anti-tumor vaccination is being evaluated as a prophylactic and therapeutic strategy against cancer growth, dissemination (spreading) or recurrence. Although a large number of studies investigate in detail the identity of antigens to be used for efficacious immune intervention, there have been few studies investigating the optimal form for antigen to be used in the vaccine. Here we show in a mouse H-2(d) MHC background and for NY-ESO-1 that genetic (plasmid DNA) but not full length protein vaccine is capable of inducing a protective prophylactic anti-tumor cytotoxic T-cell immune response in vivo. Peptide vaccination using nominal MHC class I epitope adjuvanted with a Toll Like Receptor agonist such as stabilized RNA can also provide some anti-tumor protection. Our results highlight the idea that when evaluating the clinical efficacy of a cancer vaccine, not only the identity of the antigen but also the format of the vaccine is of the utmost importance.

Published
2010

49. Differential functionality of fluoropyrimidine nucleosides for safe cancer therapy.

Author

Holzinger T, Frei J, Jarzebska NT, Beer HD, Kündig TM, Pascolo S, Läuchli S, and Mellett M

Abstract

Chemotherapies are standard care for most cancer types. Pyrimidine analogs including 5-fluorouracil, cytosine arabinoside, 5-azacytidine, and gemcitabine are effective drugs that are utilized as part of a number of anticancer regimens. However, their lack of cell-specificity results in severe side effects. Therefore, there is a capacity to improve the efficacy of such therapies, while decreasing unwanted side effects. Here, we report that while 5-fluorocytosine is not chemotherapeutic in itself, incorporated into a ribonucleoside and more importantly into an RNA oligonucleotide, it induces cytotoxic effects on cancer cells in vitro . Interestingly, these effects are rescued by both uridine and thymidine. Similarly, in-vitro 2'-deoxy-5-fluorocytidine inhibits the growth of tumor cells but has the advantage of being less toxic to human primary cells compared with 5-fluorocytidine, suggesting that the deoxyribonucleoside could exhibit less side-effects in vivo . Thus, this work indicates that the potency of 5-fluorocytidine and 2'-deoxy-5-fluorocytidine should be further explored. In particular, oligonucleotides incorporating 5-fluorocytosine could be novel chemotherapeutic drugs that could be formulated in cancer-specific particles for safe and efficacious cancer treatments., (Copyright © 2024 The Author(s). Published by Wolters Kluwer Health, Inc.)

Published
2024
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50. Synthetic mRNAs Containing Minimalistic Untranslated Regions Are Highly Functional In Vitro and In Vivo.

Author

Mamaghani S, Penna RR, Frei J, Wyss C, Mellett M, Look T, Weiss T, Guenova E, Kündig TM, Lauchli S, and Pascolo S

Subjects
Animals, Humans, Untranslated Regions, Mice, COVID-19 virology, COVID-19 Vaccines immunology, Transcription, Genetic, RNA, Messenger genetics, RNA, Messenger metabolism, SARS-CoV-2 genetics
Abstract

Synthetic mRNA produced by in vitro transcription (ivt mRNA) is the active pharmaceutical ingredient of approved anti-COVID-19 vaccines and of many drugs under development. Such synthetic mRNA typically contains several hundred bases of non-coding "untranslated" regions (UTRs) that are involved in the stabilization and translation of the mRNA. However, UTRs are often complex structures, which may complicate the entire production process. To eliminate this obstacle, we managed to reduce the total amount of nucleotides in the UTRs to only four bases. In this way, we generate minimal ivt mRNA ("minRNA"), which is less complex than the usual optimized ivt mRNAs that are contained, for example, in approved vaccines. We have compared the efficacy of minRNA to common augmented mRNAs (with UTRs of globin genes or those included in licensed vaccines) in vivo and in vitro and could demonstrate equivalent functionalities. Our minimal mRNA design will facilitate the further development and implementation of ivt mRNA-based vaccines and therapies.

Published
2024
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