13,455 results on '"Parton A"'
Search Results
2. A Systematization of the Wagner Framework: Graph Theory Conjectures and Reinforcement Learning
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Angileri, Flora, Lombardi, Giulia, Fois, Andrea, Faraone, Renato, Metta, Carlo, Salvi, Michele, Bianchi, Luigi Amedeo, Fantozzi, Marco, Galfrè, Silvia Giulia, Pavesi, Daniele, Parton, Maurizio, and Morandin, Francesco
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Computer Science - Machine Learning - Abstract
In 2021, Adam Zsolt Wagner proposed an approach to disprove conjectures in graph theory using Reinforcement Learning (RL). Wagner's idea can be framed as follows: consider a conjecture, such as a certain quantity f(G) < 0 for every graph G; one can then play a single-player graph-building game, where at each turn the player decides whether to add an edge or not. The game ends when all edges have been considered, resulting in a certain graph G_T, and f(G_T) is the final score of the game; RL is then used to maximize this score. This brilliant idea is as simple as innovative, and it lends itself to systematic generalization. Several different single-player graph-building games can be employed, along with various RL algorithms. Moreover, RL maximizes the cumulative reward, allowing for step-by-step rewards instead of a single final score, provided the final cumulative reward represents the quantity of interest f(G_T). In this paper, we discuss these and various other choices that can be significant in Wagner's framework. As a contribution to this systematization, we present four distinct single-player graph-building games. Each game employs both a step-by-step reward system and a single final score. We also propose a principled approach to select the most suitable neural network architecture for any given conjecture, and introduce a new dataset of graphs labeled with their Laplacian spectra. Furthermore, we provide a counterexample for a conjecture regarding the sum of the matching number and the spectral radius, which is simpler than the example provided in Wagner's original paper. The games have been implemented as environments in the Gymnasium framework, and along with the dataset, are available as open-source supplementary materials., Comment: Accepted at the 27th International Conference on Discovery Science http://ds2024.isti.cnr.it/
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- 2024
3. Tailoring the Morphology of Cellulose Nanocrystals via Controlled Aggregation
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Ballu, Kévin, Lim, Jia-Hui, Parton, Thomas G., Parker, Richard M., Frka-Petesic, Bruno, Lapkin, Alexei A., Ogawa, Yu, and Vignolini, Silvia
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Condensed Matter - Soft Condensed Matter - Abstract
Cellulose nanocrystals (CNCs) are bioderived nanoparticles that can be isolated from various sources of natural cellulose via acid hydrolysis. However, the link between particle morphological characteristics and their ensemble behavior is poorly understood, partly because of the difficulties in controlling the CNC morphology during their extraction process. In this work, the impacts of common post-hydrolysis treatments on the CNC morphology are investigated. The results indicate that the centrifugation step commonly applied during CNC purification favors the formation of composite particles made of aligned crystallites, referred to as 'bundles'. Scanning nanobeam electron diffraction reveals that such bundles are associated preferentially along their hydrophobic faces. This is in stark contrast to the formation of misaligned composite particles that can be achieved with ionic treatments, where an uncontrolled aggregation occurs. The functional relevance of these morphological differences is demonstrated by their effect on the cholesteric self-organization of CNCs, with bundles found to exhibit a greater chiral enhancement, whereas the misaligned composite particles found to promote gelation. This study reveals the importance of the often-disregarded purification steps on the final morphology of CNCs and their resulting ensemble properties, thereby unlocking new routes for tailoring this promising material towards a variety of applications.
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- 2024
4. SECONDARY PRODUCTION OF THE CENTRAL RANGELAND REGION OF THE UNITED STATES : A STUDY OF YEARLING CATTLE PRODUCTION
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Raynor, Edward J., Derner, Justin D., Hartman, Melannie D., Dorich, Christopher D., Parton, William J., Hendrickson, John R., Harmoney, Keith R., Brennan, Jameson R., Owensby, Clenton E., Kaplan, Nicole E., Lutz, Susan M., Hoover, David L., and Augustine, David J.
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- 2024
5. Low-Density Urbanisation: Prestate Settlement Growth in a Pacific Society
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Parton, Phillip and Clark, Geoffrey
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- 2024
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6. The emerging predictive and prognostic role of HER2 in HER2-negative early breast cancer: a retrospective study
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Corianò, Matilde, Tommasi, Chiara, Dinh, Anh Thi Lan, Needham, Jazmine, Aziz, Hala, Joharatnam-Hogan, Nalinie, Cunningham, Niamh, Waterhouse, Jasmin, Sun, Mingze, Turkes, Fiona, Pellegrino, Benedetta, McGrath, Sophie, Okines, Alicia, Parton, Marina, Turner, Nicholas, Johnston, Stephen, Musolino, Antonino, Ring, Alistair, and Battisti, Nicolò Matteo Luca
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- 2024
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7. Signature-Based Community Detection for Time Series
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Gregnanin, Marco, De Smedt, Johannes, Gnecco, Giorgio, and Parton, Maurizio
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Computer Science - Social and Information Networks ,Physics - Data Analysis, Statistics and Probability - Abstract
Community detection for time series without prior knowledge poses an open challenge within complex networks theory. Traditional approaches begin by assessing time series correlations and maximizing modularity under diverse null models. These methods suffer from assuming temporal stationarity and are influenced by the granularity of observation intervals. In this study, we propose an approach based on the signature matrix, a concept from path theory for studying stochastic processes. By employing a signature-derived similarity measure, our method overcomes drawbacks of traditional correlation-based techniques. Through a series of numerical experiments, we demonstrate that our method consistently yields higher modularity compared to baseline models, when tested on the Standard and Poor's 500 dataset. Moreover, our approach showcases enhanced stability in modularity when the length of the underlying time series is manipulated. This research contributes to the field of community detection by introducing a signature-based similarity measure, offering an alternative to conventional correlation matrices.
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- 2023
8. Room-temperature ferroelectric nematic liquid crystal showing a large and divergent density
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Parton-Barr, Charles, Gleeson, Helen, and Mandle, Richard
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Condensed Matter - Soft Condensed Matter - Abstract
The ferroelectric nematic phase (NF) is a recently discovered phase of matter in which the orientational order of the conventional nematic liquid crystal state is augmented with polar order. Atomistic simulations suggest that the polar NF phase would be denser than conventional nematics owing to contributions from polar order. Using an oscillating U-tube densitometer, we obtain detailed temperature-dependent density values for a selection of conventional liquid crystals with excellent agreement with earlier reports. Having demonstrated the validity of our method, we then record density as a function of temperature for M5, a novel room-temperature ferroelectric nematic material. We present the first experimental density data for a NF material as well as density data for a nematic that has not previously been reported. We find that the room-temperature NF material shows a large (>1.3 g cm3) density at all temperatures studied, with an increase in density at phase transitions. The magnitude of the increase for the intermediate splay-ferroelectric nematic (NX-NF) transition is an order of magnitude smaller than the isotropic-nematic (I-N) transition. Present results may be typical of ferroelectric nematic materials, potentially guiding material development, and is especially relevant for informing ongoing studies into this emerging class of materials.
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- 2023
9. Reflecting Experiences of Regional Academic, Tourism, and Education Specialists in Geoheritage Evaluation for Fujairah, UAE and Southeast Arabia
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Sayama, Kenta, Parker, Adrian G, Parton, Ash, and Viles, Heather
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- 2024
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10. Clathrin isoform CHC22, a component of neuromuscular and myotendinous junctions, binds sorting nexin 5 and has increased expression during myogenesis and muscle regeneration
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Towler, MC, Gleeson, PA, Hoshino, S, Rahkila, P, Ohkoshi, N, Ordahl, CP, Parton, RG, and Brodsky, FM
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Animals Carrier Proteins/*metabolism Cell Line Clathrin/*metabolism Clathrin Heavy Chains/analysis/genetics/*metabolism Cobra Cardiotoxin Proteins/pharmacology Desmin/analysis/metabolism Humans Integrins/analysis/metabolism Intermediate Filament Proteins/analysis/metabolism *Muscle Development Muscle Proteins/analysis/genetics/*metabolism Muscle ,Skeletal/growth & development/metabolism/*physiology Nerve Tissue Proteins/analysis/metabolism Nestin Neuromuscular Junction/chemistry/*metabolism Protein Transport *Regeneration Sorting Nexins Tendons/immunology/metabolism Two-Hybrid System Techniques Vesicular Transport Proteins ,Biological Sciences ,Medical and Health Sciences ,Developmental Biology ,Biochemistry and cell biology - Abstract
The muscle isoform of clathrin heavy chain, CHC22, has 85% sequence identity to the ubiquitously expressed CHC17, yet its expression pattern and function appear to be distinct from those of well-characterized clathrin-coated vesicles. In mature muscle CHC22 is preferentially concentrated at neuromuscular and myotendinous junctions, suggesting a role at sarcolemmal contacts with extracellular matrix. During myoblast differentiation, CHC22 expression is increased, initially localized with desmin and nestin and then preferentially segregated to the poles of fused myoblasts. CHC22 expression is also increased in regenerating muscle fibers with the same time course as embryonic myosin, indicating a role in muscle repair. CHC22 binds to sorting nexin 5 through a coiled-coil domain present in both partners, which is absent in CHC17 and coincides with the region on CHC17 that binds the regulatory light-chain subunit. These differential binding data suggest a mechanism for the distinct functions of CHC22 relative to CHC17 in membrane traffic during muscle development, repair, and at neuromuscular and myotendinous junctions.
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- 2023
11. Evaluating qualitative data analysis workshops from the perspective of public contributors
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Alice Moult, Carmel McGrath, Kate Lippiett, Caroline Coope, Andrew Turner, Simon Chillcott, Linda Parton, Pam Holloway, Sally Dace, Andy Gibson, Clare Jinks, Zoe Paskins, Mari Carmen Portillo, Cindy Mann, and Krysia Dziedzic
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Patient and public involvement ,Evaluation ,Qualitative research ,Cube ,Medicine ,Medicine (General) ,R5-920 - Abstract
Abstract Background The aim of this project is to evaluate public contributors’ experiences of their involvement in qualitative data analysis workshops during an on-going research project titled ‘Personalised Primary care for Patients with Multiple long-term conditions’. Methods Four qualitative data analysis workshops were designed and conducted between August and December 2023. We used the Cube evaluation framework (henceforth referred to as the Cube) to evaluate the workshops. The Cube suggests four domains for successful PPI (voice, agenda, change, contribute).Within Workshops One, Two and Three public contributors had to login to an account to access the Cube; this was modified in Workshop Four following feedback from public contributors. Findings Across the four workshops the Cube was completed 11 times. Across all four workshops, public contributors thought that their voice was heard, that there were diverse ways to contribute and that they led the agenda. Public contributors thought that researchers responded to their questions and issues, when necessary. Conclusion This evaluation has shown that public contributors can gain new skills and lead qualitative data analysis discussions.
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- 2024
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12. Signature-based portfolio allocation: a network approach
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Marco Gregnanin, Yanyi Zhang, Johannes De Smedt, Giorgio Gnecco, and Maurizio Parton
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Signature ,Portfolio optimization ,Network analysis ,Applied mathematics. Quantitative methods ,T57-57.97 - Abstract
Abstract Portfolio allocation represents a significant challenge within financial markets, traditionally relying on correlation or covariance matrices to delineate relationships among stocks. However, these methodologies assume time stationarity and only capture linear relationships among stocks. In this study, we propose to substitute the conventional Pearson’s correlation or covariance matrix in portfolio optimization with a similarity matrix derived from the signature. The signature, a concept from path theory, provides a unique representation of time series data, encoding their geometric patterns and inherent properties. Furthermore, we undertake a comparative analysis of network structures derived from the correlation matrix versus those obtained from the signature-based similarity matrix. Through numerical evaluation on the Standard & Poor’s 500, we assess that portfolio allocation utilizing the signature-based similarity matrix yielded superior results in terms of cumulative log-returns and Sharpe ratio compared to the baseline network approach based on Pearson’s correlation. This assessment was conducted across various portfolio optimization strategies. This research contributes to portfolio allocation and financial network representation by proposing the use of signature-based similarity matrices over traditional correlation or covariance matrices.
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- 2024
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13. Prevalence of cardiovascular events in a population-based registry of patients with systemic lupus erythematosus
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Daniel P. Joyce, Jeffrey S. Berger, Allison Guttmann, Ghadeer Hasan, Jill P. Buyon, H. Michael Belmont, Jane Salmon, Anca Askanase, Joan Bathon, Laura Geraldino-Pardilla, Yousaf Ali, Ellen M. Ginzler, Chaim Putterman, Caroline Gordon, Charles G. Helmick, Kamil E. Barbour, Heather T. Gold, Hilary Parton, and Peter M. Izmirly
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Systemic lupus erythematosus ,Cardiovascular disease ,Myocardial infarction ,Cerebrovascular accident ,Epidemiology ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background The Manhattan Lupus Surveillance Program (MLSP), a population-based retrospective registry of patients with systemic lupus erythematosus (SLE), was used to investigate the prevalence of cardiovascular disease events (CVE) and compare rates among sex, age and race/ethnicity to population-based controls. Methods Patients with prevalent SLE in 2007 aged ≥ 20 years in the MLSP were included. CVE required documentation of a myocardial infarction or cerebrovascular accident. We calculated crude risk ratios and adjusted risk ratios (ARR) controlling for sex, age group, race and ethnicity, and years since diagnosis. Data from the 2009–2010 National Health and Nutrition Examination Survey (NHANES) and the 2013–2014 NYC Health and Nutrition Examination Survey (NYC HANES) were used to calculate expected CVE prevalence by multiplying NHANES and NYC HANES estimates by strata-specific counts of patients with SLE. Crude prevalence ratios (PRs) using national and NYC estimates and age standardized prevalence ratios (ASPRs) using national estimates were calculated. Results CVE occurred in 13.9% of 1,285 MLSP patients with SLE, and risk was increased among men (ARR:1.7, 95%CI:1.2–2.5) and older adults (age > 60 ARR:2.5, 95%CI:1.7–3.8). Compared with non-Hispanic Asian patients, CVE risk was elevated among Hispanic/Latino (ARR:3.1, 95%CI:1.4-7.0) and non-Hispanic Black (ARR:3.5, 95%CI1.6-7.9) patients as well as those identified as non-Hispanic and in another or multiple racial groups (ARR:4.2, 95%CI:1.1–15.8). Overall, CVE prevalence was higher among patients with SLE than nationally (ASPR:3.1, 95%CI:3.0-3.1) but did not differ by sex. Compared with national race and ethnicity-stratified estimates, CVE among patients with SLE was highest among Hispanics/Latinos (ASPR:4.3, 95%CI:4.2–4.4). CVE was also elevated among SLE registry patients compared with all NYC residents. Comparisons with age-stratified national estimates revealed PRs of 6.4 (95%CI:6.2–6.5) among patients aged 20–49 years and 2.2 (95%CI:2.1–2.2) among those ≥ 50 years. Male (11.3, 95%CI:10.5–12.1), Hispanic/Latino (10.9, 95%CI:10.5–11.4) and non-Hispanic Black (6.2, 95%CI:6.0-6.4) SLE patients aged 20–49 had the highest CVE prevalence ratios. Conclusions These population-based estimates of CVE in a diverse registry of patients with SLE revealed increased rates among younger male, Hispanic/Latino and non-Hispanic Black patients. These findings reinforce the need to appropriately screen for CVD among all SLE patients but particularly among these high-risk patients.
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- 2024
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14. On the Behavior of the Payoff Amounts in Simple Interest Loans in Arbitrage-Free Markets
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Di Biase, Fausto, Di Rocco, Stefano, Ortolano, Alessandra, and Parton, Maurizio
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Quantitative Finance - Mathematical Finance ,Economics - Theoretical Economics - Abstract
The Consumer Financial Protection Bureau defines the notion of payoff amount as the amount that has to be payed at a particular time in order to completely pay off the debt, in case the lender intends to pay off the loan early, way before the last installment is due (CFPB 2020). This amount is well-understood for loans at compound interest, but much less so when simple interest is used. Recently, Aretusi and Mari (2018) have proposed a formula for the payoff amount for loans at simple interest. We assume that the payoff amounts are established contractually at time zero, whence the requirement that no arbitrage may arise this way The first goal of this paper is to study this new formula and derive it within a model of a loan market in which loans are bought and sold at simple interest, interest rates change over time, and no arbitrage opportunities exist. The second goal is to show that this formula exhibits a behaviour rather different from the one which occurs when compound interest is used. Indeed, we show that, if the installments are constant and if the interest rate is greater than a critical value (which depends on the number of installments), then the sequence of the payoff amounts is increasing before a certain critical time, and will start decreasing only thereafter. We also show that the critical value is decreasing as a function of the number of installments. For two installments, the critical value is equal to the golden section. The third goal is to introduce a more efficient polynomial notation, which encodes a basic tenet of the subject: Each amount of money is embedded in a time position (to wit: The time when it is due). The model of a loan market we propose is naturally linked to this new notation.
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- 2023
15. Lattice Calculation of the Intrinsic Soft Function and the Collins-Soper Kernel
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Lattice Parton Collaboration, Chu, Min-Huan, He, Jin-Chen, Hua, Jun, Liang, Jian, Ji, Xiangdong, Schäfer, Andreas, Shu, Hai-Tao, Su, Yushan, Walter, Lisa, Wang, Wei, Wang, Ji-Hao, Yang, Yi-Bo, Zeng, Jun, and Zhang, Qi-An
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High Energy Physics - Lattice ,High Energy Physics - Experiment ,High Energy Physics - Phenomenology - Abstract
We calculate the soft function using lattice QCD in the framework of large momentum effective theory incorporating the one-loop perturbative contributions. The soft function is a crucial ingredient in the lattice determination of light cone objects using transverse-momentum-dependent (TMD) factorization. It consists of a rapidity-independent part called intrinsic soft function and a rapidity-dependent part called Collins-Soper kernel. We have adopted appropriate normalization when constructing the pseudo-scalar meson form factor that is needed in the determination of the intrinsic part and applied Fierz rearrangement to suppress the higher-twist effects. In the calculation of CS kernel we consider a CLS ensemble other than the MILC ensemble used in a previous study. We have also compared the applicability of determining the CS kernel using quasi TMDWFs and quasi TMDPDFs. As an example, the determined soft function is used to obtain the physical TMD wave functions (WFs) of pion and unpolarized iso-vector TMD parton distribution functions (PDFs) of proton., Comment: 24 pages, 19 figures, published version
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- 2023
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16. Correction: Reflecting Experiences of Regional Academic, Tourism, and Education Specialists in Geoheritage Evaluation for Fujairah, UAE and Southeast Arabia
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Sayama, Kenta, Parker, Adrian G, Parton, Ash, and Viles, Heather
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- 2024
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17. Evaluating qualitative data analysis workshops from the perspective of public contributors
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Moult, Alice, McGrath, Carmel, Lippiett, Kate, Coope, Caroline, Turner, Andrew, Chillcott, Simon, Parton, Linda, Holloway, Pam, Dace, Sally, Gibson, Andy, Jinks, Clare, Paskins, Zoe, Portillo, Mari Carmen, Mann, Cindy, and Dziedzic, Krysia
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- 2024
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18. Prevalence of cardiovascular events in a population-based registry of patients with systemic lupus erythematosus
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Joyce, Daniel P., Berger, Jeffrey S., Guttmann, Allison, Hasan, Ghadeer, Buyon, Jill P., Belmont, H. Michael, Salmon, Jane, Askanase, Anca, Bathon, Joan, Geraldino-Pardilla, Laura, Ali, Yousaf, Ginzler, Ellen M., Putterman, Chaim, Gordon, Caroline, Helmick, Charles G., Barbour, Kamil E., Gold, Heather T., Parton, Hilary, and Izmirly, Peter M.
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- 2024
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19. Signature-based portfolio allocation: a network approach
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Gregnanin, Marco, Zhang, Yanyi, De Smedt, Johannes, Gnecco, Giorgio, and Parton, Maurizio
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- 2024
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20. Emergent temperature sensitivity of soil organic carbon driven by mineral associations
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Georgiou, Katerina, Koven, Charles D., Wieder, William R., Hartman, Melannie D., Riley, William J., Pett-Ridge, Jennifer, Bouskill, Nicholas J., Abramoff, Rose Z., Slessarev, Eric W., Ahlström, Anders, Parton, William J., Pellegrini, Adam F. A., Pierson, Derek, Sulman, Benjamin N., Zhu, Qing, and Jackson, Robert B.
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- 2024
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21. Literacy in Place: Creating Community by Reading and Writing Rural Stories
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Parton, Chea L.
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This article describes the author's journey to creating the website Literacy In Place (LIP) and outlines the major components of the site. LIP was created to support the reading and writing of rural stories in an effort to help create rural community across the various (non)rural and academic spaces. The principles of the community are: (1) Rural stories are worth reading and worthy of study; (2) Rural stories are worth telling; and (3) Rural cultures are worth sustaining.
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- 2022
22. Development of a plant carbon–nitrogen interface coupling framework in a coupled biophysical-ecosystem–biogeochemical model (SSiB5/TRIFFID/DayCent-SOM v1.0)
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Z. Xiang, Y. Xue, W. Guo, M. D. Hartman, Y. Liu, and W. J. Parton
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Geology ,QE1-996.5 - Abstract
Plant and microbial nitrogen (N) dynamics and N availability regulate the photosynthetic capacity and capture, allocation, and turnover of carbon (C) in terrestrial ecosystems. Studies have shown that a wide divergence in representations of N dynamics in land surface models leads to large uncertainties in the biogeochemical cycle of terrestrial ecosystems and then in climate simulations as well as the projections of future trajectories. In this study, a plant C–N interface coupling framework is developed and implemented in a coupled biophysical-ecosystem–biogeochemical model (SSiB5/TRIFFID/DayCent-SOM v1.0). The main concept and structure of this plant C–N framework and its coupling strategy are presented in this study. This framework takes more plant N-related processes into account. The dynamic C/N ratio (CNR) for each plant functional type (PFT) is introduced to consider plant resistance and adaptation to N availability to better evaluate the plant response to N limitation. Furthermore, when available N is less than plant N demand, plant growth is restricted by a lower maximum carboxylation capacity of RuBisCO (Vc,max), reducing gross primary productivity (GPP). In addition, a module for plant respiration rates is introduced by adjusting the respiration with different rates for different plant components at the same N concentration. Since insufficient N can potentially give rise to lags in plant phenology, the phenological scheme is also adjusted in response to N availability. All these considerations ensure a more comprehensive incorporation of N regulations to plant growth and C cycling. This new approach has been tested systematically to assess the effects of this coupling framework and N limitation on the terrestrial carbon cycle. Long-term measurements from flux tower sites with different PFTs and global satellite-derived products are employed as references to assess these effects. The results show a general improvement with the new plant C–N coupling framework, with more consistent emergent properties, such as GPP and leaf area index (LAI), compared to the observations. The main improvements occur in tropical Africa and boreal regions, accompanied by a decrease in the bias in global GPP and LAI by 16.3 % and 27.1 %, respectively.
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- 2024
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23. The 2020-2021 Whippoorwill Award: Redefining and Reconsidering What Counts as Rural YA Literature
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Kedley, Kate E., Brenner, Devon, Parton, Chea L., Eppley, Karen, Kleese, Nick, Sanders, Jennifer, and Short, Stephanie
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The Whippoorwill Award aims to bring attention to the theme of rural spaces and people in the larger genre of young adult literature. This award annually recognizes the best books for the middle grades and young adult readers that portray the value of rural spaces, knowledge, people, and cultures. The Whippoorwill Award is intended to be a resource for young readers, their teachers and other adults in their lives to help identify authentic, complex, meaningful, and well-written portrayals of rural life. This article discusses the third cycle of Whippoorwill Book Award winners, covering the publication years of 2020 and 2021. The winners include 13 diverse and compelling books that portray rural people and places in dynamic and energizing ways.
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- 2022
24. Universal adaptive optics for microscopy through embedded neural network control
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Hu, Qi, Hailstone, Martin, Wang, Jingyu, Wincott, Matthew, Stoychev, Danail, Atilgan, Huriye, Gala, Dalia, Chaiamarit, Tai, Parton, Richard M., Antonello, Jacopo, Packer, Adam M., Davis, Ilan, and Booth, Martin J.
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Electrical Engineering and Systems Science - Image and Video Processing ,Electrical Engineering and Systems Science - Systems and Control ,Physics - Optics - Abstract
The resolution and contrast of microscope imaging is often affected by aberrations introduced by imperfect optical systems and inhomogeneous refractive structures in specimens. Adaptive optics (AO) compensates these aberrations and restores diffraction limited performance. A wide range of AO solutions have been introduced, often tailored to a specific microscope type or application. Until now, a universal AO solution -- one that can be readily transferred between microscope modalities -- has not been deployed. We propose versatile and fast aberration correction using a physics-based machine learning (ML) assisted wavefront-sensorless AO control method. Unlike previous ML methods, we used a bespoke neural network (NN) architecture, designed using physical understanding of image formation, that was embedded in the control loop of the microscope. The approach means that not only is the resulting NN orders of magnitude simpler than previous NN methods, but the concept is translatable across microscope modalities. We demonstrated the method on a two-photon, a three-photon and a widefield three-dimensional (3D) structured illumination microscope. Results showed that the method outperformed commonly-used modal-based sensorless AO methods. We also showed that our ML-based method was robust in a range of challenging imaging conditions, such as extended 3D sample structures, specimen motion, low signal to noise ratio and activity-induced fluorescence fluctuations. Moreover, as the bespoke architecture encapsulated physical understanding of the imaging process, the internal NN configuration was no-longer a ``black box'', but provided physical insights on internal workings, which could influence future designs., Comment: 27 pages, 12 figures
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- 2023
25. Increasing biases can be more efficient than increasing weights
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Metta, Carlo, Fantozzi, Marco, Papini, Andrea, Amato, Gianluca, Bergamaschi, Matteo, Galfrè, Silvia Giulia, Marchetti, Alessandro, Vegliò, Michelangelo, Parton, Maurizio, and Morandin, Francesco
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Computer Science - Neural and Evolutionary Computing ,Computer Science - Machine Learning ,I.2.6 - Abstract
We introduce a novel computational unit for neural networks that features multiple biases, challenging the traditional perceptron structure. This unit emphasizes the importance of preserving uncorrupted information as it is passed from one unit to the next, applying activation functions later in the process with specialized biases for each unit. Through both empirical and theoretical analyses, we show that by focusing on increasing biases rather than weights, there is potential for significant enhancement in a neural network model's performance. This approach offers an alternative perspective on optimizing information flow within neural networks. See source code at https://github.com/CuriosAI/dac-dev., Comment: Major rewriting. Supersedes v1 and v2. Focusing on the fact that not all parameters are born equal: biases can be more important than weights. Accordingly, new title and new abstract, and many more experiments on fully connected architectures. This is the extended version of the paper published at WACV 2024
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- 2023
26. AI for Sustainability: Research at Ud'A Node.
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Gianluca Amato, Alessia Amelio, Luciano Caroprese, Piero Chiacchiaretta, Fabio Fioravanti, Luigi Ippoliti, Maria Chiara Meo, Gianpiero Monaco, Christian Morbidoni, Luca Moscardelli, Maurizio Parton, and Francesca Scozzari
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- 2024
27. Predicting the Failure of Component X in the Scania Dataset with Graph Neural Networks.
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Maurizio Parton, Andrea Fois, Michelangelo Vegliò, Carlo Metta, and Marco Gregnanin
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- 2024
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28. GloNets: Globally Connected Neural Networks.
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Antonio Di Cecco, Carlo Metta, Marco Fantozzi, Francesco Morandin, and Maurizio Parton
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- 2024
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29. Increasing biases can be more efficient than increasing weights.
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Carlo Metta, Marco Fantozzi, Andrea Papini, Gianluca Amato, Matteo Bergamaschi, Silvia Giulia Galfrè, Alessandro Marchetti, Michelangelo Vegliò, Maurizio Parton, and Francesco Morandin
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- 2024
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30. Predicting the Failure of Component X in the Scania Dataset with Graph Neural Networks
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Parton, Maurizio, Fois, Andrea, Vegliò, Michelangelo, Metta, Carlo, Gregnanin, Marco, Goos, Gerhard, Founding Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Miliou, Ioanna, editor, Piatkowski, Nico, editor, and Papapetrou, Panagiotis, editor
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- 2024
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31. GloNets: Globally Connected Neural Networks
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Di Cecco, Antonio, Metta, Carlo, Fantozzi, Marco, Morandin, Francesco, Parton, Maurizio, Goos, Gerhard, Founding Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Miliou, Ioanna, editor, Piatkowski, Nico, editor, and Papapetrou, Panagiotis, editor
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- 2024
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32. Signature-Based Community Detection for Time Series
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Gregnanin, Marco, De Smedt, Johannes, Gnecco, Giorgio, Parton, Maurizio, Kacprzyk, Janusz, Series Editor, Cherifi, Hocine, editor, Rocha, Luis M., editor, Cherifi, Chantal, editor, and Donduran, Murat, editor
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- 2024
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33. Early architecture in Tonga: implications for the development of Polynesian chiefdoms
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Clark, Geoffrey, Parton, Phillip, and Reepmeyer, Christian
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Anthropological research ,Architecture, Ancient -- Analysis ,Tribal government -- Research ,Anthropology/archeology/folklore - Abstract
Durable architecture is a hallmark of Polynesian chiefdoms, associated with centralised control of residential and agricultural land. Previous work in West Polynesia has indicated a relatively late date for the onset of such construction activity--after AD 1000--suggesting that political development was influenced by events such as post-colonisation migration. The authors report new dating evidence from the excavation of a large earth mound on the island of Tongatapu. Its construction 1500 years ago indicates that, in contrast to previous findings, well-developed chiefdoms and field monuments probably dominated the landscapes of West Polynesia substantially prior to the colonisation of more easterly island nations. Keywords: Polynesia, first millennium AD, AMS radiocarbon dating, LiDAR, stratigraphy, chiefdoms, social complexity, Introduction The archaeological record of the first millennium AD in West Polynesia is central to our understanding of the in situ development of chiefly polities and the nature of political [...]
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- 2024
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34. Room Temperature Optically and Magnetically Active Edges in Phosphorene Nanoribbons
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Ashoka, Arjun, Clancy, Adam J., Panjwani, Naitik A., Popiel, Nicholas J. M., Eaton, Alex, Parton, Thomas G., Picco, Loren, Feldmann, Sascha, Shutt, Rebecca R. C., Carey, Remington, Aw, Eva S. Y., Macdonald, Thomas J., Severijnen, Marion E., Kleuskens, Sandra, de Aguiar, Hilton Barbosa, Friend, Richard H., Behrends, Jan, Christianen, Peter C. M., Howard, Christopher A., Rao, Akshay, and Pandya, Raj
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Condensed Matter - Mesoscale and Nanoscale Physics ,Condensed Matter - Materials Science - Abstract
Nanoribbons - nanometer wide strips of a two-dimensional material - are a unique system in condensed matter physics. They combine the exotic electronic structures of low-dimensional materials with an enhanced number of exposed edges, where phenomena including ultralong spin coherence times, quantum confinement and topologically protected states can emerge. An exciting prospect for this new material concept is the potential for both a tunable semiconducting electronic structure and magnetism along the nanoribbon edge. This combination of magnetism and semiconducting properties is the first step in unlocking spin-based electronics such as non-volatile transistors, a route to low-energy computing, and has thus far typically only been observed in doped semiconductor systems and/or at low temperatures. Here, we report the magnetic and semiconducting properties of phosphorene nanoribbons (PNRs). Static (SQUID) and dynamic (EPR) magnetization probes demonstrate that at room temperature, films of PNRs exhibit macroscopic magnetic properties, arising from their edge, with internal fields of ~ 250 to 800 mT. In solution, a giant magnetic anisotropy enables the alignment of PNRs at modest sub-1T fields. By leveraging this alignment effect, we discover that upon photoexcitation, energy is rapidly funneled to a dark-exciton state that is localized to the magnetic edge and coupled to a symmetry-forbidden edge phonon mode. Our results establish PNRs as a unique candidate system for studying the interplay of magnetism and semiconducting ground states at room temperature and provide a stepping-stone towards using low-dimensional nanomaterials in quantum electronics., Comment: 18 pages, 4 figures
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- 2022
35. Unpolarized Transverse-Momentum-Dependent Parton Distributions of the Nucleon from Lattice QCD
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Lattice Parton Collaboration, He, Jin-Chen, Chu, Min-Huan, Hua, Jun, Ji, Xiangdong, Schäfer, Andreas, Su, Yushan, Wang, Wei, Yang, Yibo, Zhang, Jian-Hui, and Zhang, Qi-An
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High Energy Physics - Lattice ,High Energy Physics - Phenomenology - Abstract
We present a first lattice QCD calculation of the unpolarized nucleon's isovector transverse-momentum-dependent parton distribution functions (TMDPDFs), which are essential to predict observables of multi-scale, semi-inclusive processes in the standard model. We use a $N_f=2+1+1$ MILC ensemble with valence clover fermions on a highly improved staggered quark (HISQ) sea to compute the quark momentum distributions in a large-momentum nucleon on the lattice. The state-of-the-art techniques in renormalization and extrapolation in the correlation distance on the lattice are adopted. {The perturbative kernel up to next-to-next-to-leading order is taken into account}, and the dependence on the pion mass and the hadron momentum is explored. Our results are qualitatively comparable with phenomenological TMDPDFs, which provide an opportunity to predict high energy scatterings from first principles., Comment: 16 pages, 20 figures
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- 2022
36. Artificial intelligence and renegotiation of commercial lease contracts affected by pandemic-related contingencies from Covid-19. The project A.I.A.Co
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Parton, Maurizio, Angelone, Marco, Metta, Carlo, D'Ovidio, Stefania, Massarelli, Roberta, Moscardelli, Luca, and Amato, Gianluca
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Computer Science - Artificial Intelligence ,Computer Science - Computers and Society ,Computer Science - Human-Computer Interaction ,K.4 - Abstract
This paper aims to investigate the possibility of using artificial intelligence (AI) to resolve the legal issues raised by the Covid-19 emergency about the fate of continuing execution contracts, or those with deferred or periodic execution, as well as, more generally, to deal with exceptional events and contingencies. We first study whether the Italian legal system allows for ''maintenance'' remedies to cope with contingencies and to avoid the termination of the contract, while ensuring effective protection of the interests of both parties. We then give a complete and technical description of an AI-based predictive framework, aimed at assisting both the Magistrate (in the course of litigation) and the parties themselves (in out-of-court proceedings) in the redetermination of the rent of commercial lease contracts. This framework, called A.I.A.Co. for Artificial Intelligence for contract law Against Covid-19, has been developed under the Italian grant ''Fondo Integrativo Speciale per la Ricerca''., Comment: Presented at CRCL 2022: Computational 'law' on edge, https://www.cohubicol.com/about/conference-crcl-2022. Version v2 is a major revision after the conference feedback
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- 2022
37. Is endocytosis by caveolae dependent on dynamin?
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Parton, Robert G., Taraska, Justin W., and Lundmark, Richard
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- 2024
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38. Three-dimensional operando optical imaging of single particle and electrolyte heterogeneities inside Li-ion batteries
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Pandya, Raj, Valzania, Lorenzo, Dorchies, Florian, Xia, Fei, Hugh, Jeffrey Mc, Mathieson, Angus, Tan, Jien Hwee, Parton, Thomas G., De Volder, Michael, Tarascon, Jean-Marie, Gigan, Sylvain, de Aguiar, Hilton B., and Grimaud, Alexis
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Condensed Matter - Materials Science - Abstract
Understanding (de)lithiation heterogeneities in battery materials is key to ensuring optimal electrochemical performance and developing better energy storage devices. However, this remains challenging due to the complex three dimensional morphology of microscopic electrode particles, the involvement of both solid and liquid phase reactants, and range of relevant timescales (seconds to hours). Here, we overcome this problem and demonstrate the use of bench-top laser scanning confocal microscopy for simultaneous three-dimensional operando measurement of lithium ion dynamics in single particles, and the electrolyte, in batteries. We examine two technologically important cathode materials that are known to suffer from intercalation heterogeneities: LixCoO2 and LixNi0.8Mn0.1Co0.1O2. The single-particle surface-to-core transport velocity of Li-phase fronts, and volume changes - as well as their inter-particle heterogeneity - are captured as a function of C-rate, and benchmarked to previous ensemble measurements. Additionally, we visualise heterogeneities in the bulk and at the surface of particles during cycling, and image the formation of spatially non-uniform concentration gradients within the liquid electrolyte. Importantly, the conditions under which optical imaging can be performed inside absorbing and multiply scattering materials such as battery intercalation compounds are outlined., Comment: 29 pages, 6 figures
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- 2022
39. Signature-Based Community Detection for Time Series
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Gregnanin, Marco, primary, De Smedt, Johannes, additional, Gnecco, Giorgio, additional, and Parton, Maurizio, additional
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- 2024
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40. Rural Young Adult Literature
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Rachelle Kuehl and Chea Parton
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Rural YAL ,Diversity ,queer and rural intersections ,Education ,Literature (General) ,PN1-6790 - Abstract
Welcome to Study & Scrutiny, Issue 6.2. For this special issue of Study and Scrutiny: Research on Young Adult Literature, deftly curated by Rachelle Kuehl and Chea Parton, we are excited to share with you research and analysis on rural young adult literature. The study of young adult literature in rural settings is not new, but it has never been so focused. Research abounds across many scholarly journals, and other resources for exploring rural young adult literature have been established to enrich our understanding of this vital body of literature.
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- 2024
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41. Cognitive function and brain structure in COVID-19 survivors: The role of persistent symptoms
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Vakani, Krupa, Norbury, Ray, Vanova, Martina, Ratto, Martina, Parton, Andrew, Antonova, Elena, and Kumari, Veena
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- 2025
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42. Score vs. Winrate in Score-Based Games: which Reward for Reinforcement Learning?
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Pasqualini, Luca, Amato, Gianluca, Fantozzi, Marco, Gini, Rosa, Marchetti, Alessandro, Metta, Carlo, Morandin, Francesco, and Parton, Maurizio
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Computer Science - Artificial Intelligence ,I.2.6 - Abstract
In the last years, the DeepMind algorithm AlphaZero has become the state of the art to efficiently tackle perfect information two-player zero-sum games with a win/lose outcome. However, when the win/lose outcome is decided by a final score difference, AlphaZero may play score-suboptimal moves because all winning final positions are equivalent from the win/lose outcome perspective. This can be an issue, for instance when used for teaching, or when trying to understand whether there is a better move. Moreover, there is the theoretical quest for the perfect game. A naive approach would be training an AlphaZero-like agent to predict score differences instead of win/lose outcomes. Since the game of Go is deterministic, this should as well produce an outcome-optimal play. However, it is a folklore belief that "this does not work". In this paper, we first provide empirical evidence for this belief. We then give a theoretical interpretation of this suboptimality in general perfect information two-player zero-sum game where the complexity of a game like Go is replaced by the randomness of the environment. We show that an outcome-optimal policy has a different preference for uncertainty when it is winning or losing. In particular, when in a losing state, an outcome-optimal agent chooses actions leading to a higher score variance. We then posit that when approximation is involved, a deterministic game behaves like a nondeterministic game, where the score variance is modeled by how uncertain the position is. We validate this hypothesis in AlphaZero-like software with a human expert., Comment: Published at 2022 21st IEEE International Conference on Machine Learning and Applications (ICMLA). This version (v2) is a major revision and superseeds version v1
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- 2022
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43. Three-dimensional operando optical imaging of particle and electrolyte heterogeneities inside Li-ion batteries
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Pandya, Raj, Valzania, Lorenzo, Dorchies, Florian, Xia, Fei, Mc Hugh, Jeffrey, Mathieson, Angus, Tan, Hwee Jien, Parton, Thomas G., Godeffroy, Louis, Mazloomian, Katrina, Miller, Thomas S., Kanoufi, Frédéric, De Volder, Michael, Tarascon, Jean-Marie, Gigan, Sylvain, de Aguiar, Hilton B., and Grimaud, Alexis
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- 2023
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44. High-Frequency Percussive Ventilation: A Promising Rescue Strategy in Severe Lung Disease of Extremely Low Gestational Age Neonates
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Kevin Louie, Kristina Ericksen, and Lance A. Parton
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HFPV ,high-frequency percussive ventilation ,ELGANs ,extremely low gestational age neonates ,severe neonatal lung disease ,Pediatrics ,RJ1-570 - Abstract
Objective: The aim of this study was to evaluate high-frequency percussive ventilation (HFPV) as a rescue strategy for extremely low gestational age neonates (ELGANs) with severe lung disease. Methods: This is a retrospective review of 16 ELGANs with severe lung disease who were placed on HFPV following a lack of improvement on other modes of conventional and high-frequency ventilation. Results: The gestational age of these 16 infants was 25 (24, 26) weeks and their birth weight was 640 (535, 773) grams [median (IQR)], with the survivors being more immature compared to those who died [24 (23, 26) and 26 (25, 28) weeks, respectively; (p = 0.04)]; and with an overall mortality of 31% (N = 5). Of those who died, 60% were SGA (p = 0.02). Following placement on HFPV, the survivors had a statistically significant decrease in their respiratory severity scores (RSSs) [11 (9, 14) to 6 (5, 13), p = 0.03] compared to those who did not survive [15 (11, 16) to 11 (6.8, 14.5), p = 0.32] due to an improvement in their oxygenation [FiO2: 0.95 (0.85, 1) to 0.6 (0.4, 0.9), p = 0.01; compared to 1 (1, 1) to 1 (0.7, 1); survivors and non-survivors, respectively; p = 0.32]. Chest X-rays also showed significantly improved aeration due to decreased areas of atelectasis in those who survived. Conclusions: HFPV may be an appropriate rescue mode of high-frequency ventilation in the ELGAN population with severe lung disease, particularly for patients with impaired oxygenation and ventilation difficulties due to shifting atelectasis and mucous plugging.
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- 2024
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45. Non-Invasive Ventilation with Neurally Adjusted Ventilatory Assist (NAVA) Improves Extubation Outcomes in Extremely Low-Birth-Weight Infants
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Kevin Louie, Shaili Amatya, Gad Alpan, and Lance A. Parton
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neurally adjusted ventilatory assist ,non-invasive positive-pressure ventilation ,bronchopulmonary dysplasia ,extremely low birth weight ,Pediatrics ,RJ1-570 - Abstract
Objective: This study investigates the effectiveness of extubation from conventional mechanical ventilation using an endotracheal tube (MVET) compared to synchronized non-invasive positive-pressure ventilation (sNIPPV) using neurally adjusted ventilatory assist (NAVA) and conventional non-invasive positive-pressure ventilation (NIPPV) in extremely low-birth-weight (ELBW) infants. Methods: An institutional review board (IRB) approved this study (#12175) to conduct a single-center randomized control trial including 60 ELBW infants assigned in a one-to-one computer-generated scheme to either sNIPPV using NAVA or NIPPV. The primary outcome involved the need for reintubation, and the secondary outcome involved the assessment of moderate/severe BPD, defined as an oxygen requirement at 36 weeks, as in #NCT03613987 (clinicaltrials.gov). Results: There were 60 ELBW infants enrolled and randomized. The overall gestational age was 26 (1.5) weeks, and the birth weight was 773 (157) g [mean (SD)]. There were no statistically significant differences between the NAVA and NIPPV patient characteristics. There was a 41% extubation failure rate in the NIPPV group and 35% in the NAVA group (p = NS). The NAVA group had less moderate and severe BPD (p = 0.03), a shorter oxygen therapy duration (p = 0.002), a decreased length of stay (p = 0.03), and less need for home oxygen (0, 43%; p = 0.0004). Conclusions: This study found similar extubation failure rates among ELBW infants as in prior studies. However, the NAVA group had lower rates of moderate/severe BPD and need for oxygen at discharge, as well as shorter oxygen therapy duration and length of stay. The use of NAVA may be a reasonable alternative mode of non-invasive ventilation in the ELBW population.
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- 2024
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46. The relation between hemispheric lateralisation and measures of immune competence and adherence in Human Immunodeficiency Virus Type 1 (HIV-1)
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Sumner Rachel C, Nowicky Alexander V, Parton Andrew, Wylock Carolien, Cserjesi Renata, Lacor Patrick, and Gidron Yori
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Immunologic diseases. Allergy ,RC581-607 - Published
- 2012
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47. 'Bet You Can't Wait to Get Out': Complicating Narratives of Leaving in Rural Young Adult Literature
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Parton, Chea and Kuehl, Rachelle
- Abstract
Using critical theories of dominant-and counter-narratives, this study analyzed the texts of selected young adult books that focused on an underrepresented population of working-class rural youth in Appalachia. We explored how the dominant deficit narratives of these communities shaped the identity construction and choices of the books' characters, especially their decisions to stay in, leave, or return to their rural hometowns. We showed how those narratives reflected the lives and decisions of real rural young people. We also looked at the identities and ways of being that are available to rural young adult readers and how those identities are connected to structural power and inequity. With over nine million rural students in the United States, each of them deserves to see themselves reflected in the literature they read.
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- 2023
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48. Until the Last One’s Found: An Introduction to Universal Reconciliation and Restoration
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Curt Parton
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- 2024
49. The Road to 500,000 Apprentices: Ideas for Expanding Apprenticeship in California
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New America, Parton, Brent, and Prebil, Michael
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In 2018, California Governor Gavin Newsom set an ambitious goal of reaching 500,000 active apprentices by 2029. He did so because apprenticeship is a proven model and clear strategy for connecting Californians to good jobs. It has a strong track record for workers and employers in the skilled trades and in firefighting, but apprenticeship innovations are also emerging in new sectors, such as health care, information technology, advanced manufacturing, and education, opening up access to good jobs for workers and students through a combination of paid, on-the-job training, and debt-free postsecondary credentials. Access to a good job and family sustaining career is a critical cornerstone for building a more inclusive economy for communities that have always been cut off, or who today find themselves today increasingly distant from opportunities to share in the state's prosperity. But paths to a good job for California's workers and students have only narrowed. The ongoing impact of COVID-19 is making the important work of creating more clear pathways to good jobs and care simultaneously more complicated, more urgent, and more expansive in scale. COVID-19's impacts on the state's economy, especially on the small businesses which employ nearly half of Californian workers, mean more uncertainty for workers in the coming years, especially for those who were already on the fringes of a changing labor market. Like all other states, California will have many policy priorities to manage with diminished budget resources. Reaching a half a million apprentices by 2029 will rest on a strong base of apprenticeship in the building trades and firefighting, where the majority of the state's apprentices are concentrated today. But it will also demand a more expansive and inclusive apprenticeship system, where today nearly 70 percent of Californian apprentices are racial minorities, but only 7 percent are women. Apprenticeship is a strategy that can and should be applied much more broadly across California's workforce. Despite its ambition, the 10-year goal of a 500,000-apprentice system creates the necessary time and space for policymakers to evaluate and implement the necessary actions. At the same time, many of the policy ideas outlined in this report are mutually reinforcing, and as such will have the greatest potential when taken together as part of a comprehensive roadmap for expanding the availability of high-quality apprenticeship opportunities in new and emerging nontraditional industry sectors.
- Published
- 2020
50. Australian microgrids: Navigating complexity in the regional energy transition
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Wright, Simon, Frost, Mark, Wong, Alfred, and Parton, Kevin
- Published
- 2024
- Full Text
- View/download PDF
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