92 results on '"Parsons MB"'
Search Results
2. Factors associated with typical enteropathogenic Escherichia coli infection among children <5 years old with moderate-to-severe diarrhoea in rural western Kenya, 2008-2012
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Fagerli, K, Omore, R, Kim, S, Ochieng, JB, Ayers, TL, Juma, J, Farag, TH, Nasrin, D, Panchalingam, S, Robins-Browne, RM, Nataro, JP, Kotloff, KL, Levine, MM, Oundo, J, Parsons, MB, Laserson, KF, Mintz, ED, Breiman, RF, O'Reilly, CE, Fagerli, K, Omore, R, Kim, S, Ochieng, JB, Ayers, TL, Juma, J, Farag, TH, Nasrin, D, Panchalingam, S, Robins-Browne, RM, Nataro, JP, Kotloff, KL, Levine, MM, Oundo, J, Parsons, MB, Laserson, KF, Mintz, ED, Breiman, RF, and O'Reilly, CE
- Abstract
Typical enteropathogenic Escherichia coli (tEPEC) infection is a major cause of diarrhoea and contributor to mortality in children <5 years old in developing countries. Data were analysed from the Global Enteric Multicenter Study examining children <5 years old seeking care for moderate-to-severe diarrhoea (MSD) in Kenya. Stool specimens were tested for enteric pathogens, including by multiplex polymerase chain reaction for gene targets of tEPEC. Demographic, clinical and anthropometric data were collected at enrolment and ~60-days later; multivariable logistic regressions were constructed. Of 1778 MSD cases enrolled from 2008 to 2012, 135 (7.6%) children tested positive for tEPEC. In a case-to-case comparison among MSD cases, tEPEC was independently associated with presentation at enrolment with a loss of skin turgor (adjusted odds ratio (aOR) 2.08, 95% confidence interval (CI) 1.37-3.17), and convulsions (aOR 2.83, 95% CI 1.12-7.14). At follow-up, infants with tEPEC compared to those without were associated with being underweight (OR 2.2, 95% CI 1.3-3.6) and wasted (OR 2.5, 95% CI 1.3-4.6). Among MSD cases, tEPEC was associated with mortality (aOR 2.85, 95% CI 1.47-5.55). This study suggests that tEPEC contributes to morbidity and mortality in children. Interventions aimed at defining and reducing the burden of tEPEC and its sequelae should be urgently investigated, prioritised and implemented.
- Published
- 2020
3. Geochemical data for the Bay of Chaleur - Mite project # 1.2 (phase 2)
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Cranston, R E, primary and Parsons, MB, additional
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- 2001
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4. Sporadic paediatric diarrhoeal illness in urban and rural sites in Nyanza province, Kenya
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Beatty, ME, primary, Ochieng, JB, additional, Chege, W, additional, Kumar, L, additional, Okoth, G, additional, Shapiro, RL, additional, Wells, JG, additional, Parsons, MB, additional, Bopp, C, additional, Chiller, T, additional, Vulule, J, additional, Mintz, E, additional, Slutsker, L, additional, and Brooks, JT, additional
- Published
- 2010
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5. Field evaluation of crystal VC Rapid Dipstick test for cholera during a cholera outbreak in Guinea-Bissau.
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Harris JR, Cavallaro EC, de Nóbrega AA, Dos S Barrado JC, Bopp C, Parsons MB, Djalo D, Fonseca FG, Ba U, Semedo A, Sobel J, and Mintz ED
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- 2009
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6. Organic matter is a predominant control on total mercury concentration of near-surface lake sediments across a boreal to low Arctic tundra transect in northern Canada.
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Galloway JM, Parsons MB, Ardakani OH, Falck H, Fewster RE, Swindles GT, Sanei H, Palmer MJ, Nasser NA, and Patterson RT
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Mercury (Hg) is a bioavailable and toxic element with concentrations that are persistently high or rising in some Arctic and subarctic lakes despite reduced atmospheric emissions in North America. This is due to rising Hg emissions to the atmosphere outside of North America, enhanced sequestration of Hg to sediments by climate-mediated increases in primary production, and ongoing release of Hg from terrestrial reservoirs. To evaluate the influence of organic matter and other parameters on Hg accumulation in northern lakes, near-surface sediments were sampled from 60 lakes across a boreal to shrub tundra gradient in the central Northwest Territories, Canada. The organic matter of the lake sediments, assessed using programmed pyrolysis and petrology, is composed of a mixture of terrestrial, aquatic, and inert organic matter. The proportion of algal-derived organic matter is higher in sediments of lakes below treeline relative to shrub tundra sites. Total sedimentary Hg concentration is correlated to all organic matter constituents but is unrelated to latitude or lake position below or above treeline. The concentrations of Ag, Ca, P, S, U, Ti, Y, Cd, and Zn are also strong predictors of total sedimentary Hg concentration, indicating input from a common geogenic source and/or common sequestration pathways associated with organic matter. Catchment area is a strong negative predictor of total sedimentary Hg concentration, particularly in lakes above treeline, possibly due to retention capacity of Hg and other elements in local sinks. This research highlights the complexity of controls on Hg sequestration in sediment and shows that while organic matter is a strong predictor of total sedimentary Hg concentration on a landscape scale and across extreme gradients in climate and associated vegetation and permafrost, other factors such as catchment area and sources from mineralized bedrock are also important., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests:, (Crown Copyright © 2024. Published by Elsevier B.V. All rights reserved.)
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- 2024
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7. Rethinking the tiered trauma team response: A case-series study in a regional trauma centre.
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Curtis K, Clark B, Lam MK, Huckle R, Melville G, Binks S, Ryan MW, Gardner T, Parsons MB, and Ashford B
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- Humans, Retrospective Studies, Male, Female, Adult, Middle Aged, Wounds and Injuries therapy, Tomography, X-Ray Computed statistics & numerical data, Tomography, X-Ray Computed methods, Aged, Injury Severity Score, Patient Care Team, Triage methods, Logistic Models, Emergency Service, Hospital organization & administration, Emergency Service, Hospital statistics & numerical data, Trauma Centers organization & administration, Trauma Centers statistics & numerical data, Length of Stay statistics & numerical data
- Abstract
Objective: To reduce perceived unnecessary resource use, we modified our tiered trauma response. If a patient was not physiologically compromised, surgical registrar attendance was not mandated. We investigated the effect of this change on missed injury, unplanned representation to ED, diagnostic imaging rates and staff satisfaction., Methods: A retrospective case series study assessing the 3-month period before and after the intervention was conducted. Logistic regression analyses were used to examine the association between ordering of computerised tomography (CT) and ED length of stay (LOS), injury severity (ISS), age, surgical review and admission. A staff survey was conducted to investigate staff perceptions of the practice change. Free text data were analysed using inductive content analysis., Results: There were 105 patients in the control and 166 in the intervention group and their mean (SD) ISS was the same (ISS [SD] = 4 [±4] [P = 0.608]). A higher proportion of the control group were admitted (56.3% vs 42.2% [P = 0.032]) and they had a shorter ED LOS (274 min [202-456] vs 326 min [225-560], P = 0.044). The rate of missed injury was unchanged. A surgical review resulted in a 26-fold increase in receipt of a whole-body CT scan (odds ratio = 26.89, 95% confidence interval = 3.31-218.17). Just over half of survey respondents felt the change was safe (54.4%), and more surgical (90%) than ED staff (69%) reported the change as positive., Conclusion: The removal of the surgical registrar from the initial trauma standby response did not result in any adverse events, reduced admissions, pathology and imaging, but resulted in an increased ED LOS and time to surgical review., (© 2024 The Authors. Emergency Medicine Australasia published by John Wiley & Sons Australia, Ltd on behalf of Australasian College for Emergency Medicine.)
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- 2024
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8. Occurrence and mobility of thiolated arsenic in legacy mine tailings.
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Ali JD, Guatame-Garcia A, Jamieson HE, Parsons MB, Leybourne MI, Koch I, Weber KP, Patch DJ, Harrison AL, and Vriens B
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We studied the occurrence of dissolved thiolated Arsenic (As) in legacy tailings systems in Ontario and Nova Scotia, Canada, and used aqueous and mineralogical speciation analyses to assess its governing geochemical controls. Surface-accessible and inundated tailings in Cobalt, Ontario, contained ∼1 wt-% As mainly hosted in secondary arsenate minerals (erythrite, yukonite, and others) and traces of primary sulfide minerals (cobaltite, gersdorffite and others). Significant fractions of thiolated As (up to 5.9 % of total dissolved As) were detected in aqueous porewater and surface water samples from these sites, comprising mostly monothioarsenate, and smaller amounts of di- and tri-thioarsenates as well as methylated thioarsenates. Tailings at the Goldenville and Montague sites in Nova Scotia contained less (<0.5 wt-%) As, hosted mostly in arsenopyrite and As-bearing pyrite, than the Cobalt sites, but exhibited higher proportions of dissolved thiolated As (up to 17.3 % of total dissolved As, mostly mono- and di-thioarsenate and traces of tri-thioarsenate). Dissolved thiolated As was most abundant in sub-oxic porewaters and inundated tailings samples across the studied sites, and its concentrations were strongly related to the prevailing redox conditions and porewater hydrochemistry, and to a lesser extent, the As-bearing mineralogy. Our novel results demonstrate that thiolated As species play an important role in the cycling of As in mine waste systems and surrounding environments, and should be considered in mine waste management strategies for high-As sites., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Bas Vriens reports financial support was provided by Natural Sciences and Engineering Research Council of Canada. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
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- 2024
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9. Sources of geogenic arsenic in well water associated with granitic bedrock from Nova Scotia, Canada.
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Maciag BJ, Brenan JM, Parsons MB, and Kennedy GW
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- Nova Scotia, Environmental Monitoring methods, Minerals analysis, Arsenic analysis, Drinking Water analysis, Groundwater chemistry, Water Pollutants, Chemical analysis
- Abstract
Arsenic toxicity in drinking water is a global issue, with chronic exposure causing cancer and other health concerns. Groundwater from geochemically similar granites from mainland Nova Scotia, Canada, can have high and low levels of arsenic. The origin of this variation is uncertain, but different mineral hosts for arsenic could explain the disparity. The lability of arsenic from different minerals was assessed using laser ablation inductively coupled plasma mass spectrometry combined with calculations based upon well water data. Pyrite has the highest arsenic concentration (mean: 2300 μg/g, n = 9), is unstable in the groundwater system, and can release arsenic during oxidation. However, oxidation products replacing pyrite can adsorb arsenic, modifying the amount released. Cordierite has low arsenic concentrations (mean: 7.3 μg/g, n = 5) but is abundant and relatively soluble. Thus, cordierite could be a previously unrecognized source of arsenic in metapelitic rocks from metamorphic terranes. Pyrite from one of the granites studied was not oxidized, which in addition to the absence of cordierite in these same granites could account for the lower arsenic levels observed in associated well water. The results of this study can be used to identify potential geogenic sources of arsenic in other granitic terranes and reduce the risk of exposure through drinking water., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
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10. The Gombe Ecosystem Health Project: 16 years of program evolution and lessons learned.
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Lonsdorf EV, Travis DA, Raphael J, Kamenya S, Lipende I, Mwacha D, Collins DA, Wilson M, Mjungu D, Murray C, Bakuza J, Wolf TM, Parsons MB, Deere JR, Lantz E, Kinsel MJ, Santymire R, Pintea L, Terio KA, Hahn BH, Pusey AE, Goodall J, and Gillespie TR
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- Animals, Humans, Longitudinal Studies, Parks, Recreational, Primates, Tanzania epidemiology, Ecosystem, Pan troglodytes
- Abstract
Infectious disease outbreaks pose a significant threat to the conservation of chimpanzees (Pan troglodytes) and all threatened nonhuman primates. Characterizing and mitigating these threats to support the sustainability and welfare of wild populations is of the highest priority. In an attempt to understand and mitigate the risk of disease for the chimpanzees of Gombe National Park, Tanzania, we initiated a long-term health-monitoring program in 2004. While the initial focus was to expand the ongoing behavioral research on chimpanzees to include standardized data on clinical signs of health, it soon became evident that the scope of the project would ideally include diagnostic surveillance of pathogens for all primates (including people) and domestic animals, both within and surrounding the National Park. Integration of these data, along with in-depth post-mortem examinations, have allowed us to establish baseline health indicators to inform outbreak response. Here, we describe the development and expansion of the Gombe Ecosystem Health project, review major findings from the research and summarize the challenges and lessons learned over the past 16 years. We also highlight future directions and present the opportunities and challenges that remain when implementing studies of ecosystem health in a complex, multispecies environment., (© 2021 Wiley Periodicals LLC.)
- Published
- 2022
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11. Burden of Diarrhoeagenic Escherichia coli in Santa Rosa, Guatemala in active health-services surveillance during 2008-2009 and 2014-2015.
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Jarquin C, Morales O, McCracken JP, Lopez MR, Lopez B, Reyes L, Gómez GA, Bryan JP, Peruski LF, Parsons MB, and Pattabiraman V
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- Adolescent, Adult, Child, Child, Preschool, Diarrhea epidemiology, Escherichia coli genetics, Feces, Guatemala epidemiology, Humans, Infant, Infant, Newborn, Middle Aged, Young Adult, Escherichia coli Infections epidemiology, Rosa
- Abstract
Objective: To describe the epidemiology of laboratory-confirmed Diarrhoeagenic Escherichia coli (DEC) cases from active facility-based surveillance in Guatemala., Methods: We collected clinical and risk factor data on enrolled patients (aged 0-52 years) with acute diarrhoea at government healthcare facilities (1 hospital and 6 clinics) in Santa Rosa, Guatemala, during 2008-2009 and 2014-2015. Stool samples were analysed, E. coli identified through culture and biochemical tests, PCR amplification of genes encoding pathotype-specific virulence factors identified specific DEC pathotypes. Healthcare-seeking adjusted incidence rates were calculated., Results: A total of 3041 diarrhoea cases were captured by surveillance (647 hospitalisations (H), 2394 clinic visits (CV)); general E. coli prevalence was 17.9%. DEC pathotypes were identified in 19% (n = 95/497) and 21% (n = 450/2113) in diarrhoea H and CV, respectively. Enteropathogenic E. coli (EPEC) was most frequently isolated (8.2% (n = 41) in diarrhoea H, 12.0% (n = 255) in diarrhoea CV), followed by ETEC (6.8% (n = 34) in H, 6% (n = 128) in CV) and STEC (0.6% (n = 3) in H, 0.6% (n = 13) in CV). We did not find evidence of a difference in severity between DEC and non-DEC diarrhoea. Incidence of DEC clinic visits and hospitalisations was 648.0 and 29.3, respectively, per 10,000 persons aged ≤5 years and 36.8 and 0.4, respectively, per 10,000 persons aged >5 years., Conclusions: DEC pathotypes, especially EPEC and ETEC, were detected frequently from patients presenting with diarrhoeal illness in Santa Rosa, Guatemala. Our findings suggest that preventive interventions should be prioritised for young children., (© 2022 John Wiley & Sons Ltd.)
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- 2022
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12. Mediation of arsenic mobility by organic matter in mining-impacted sediment from sub-Arctic lakes: implications for environmental monitoring in a warming climate.
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Miller CB, Parsons MB, Jamieson HE, Ardakani OH, Patterson RT, and Galloway JM
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Arsenic (As) is commonly sequestered at the sediment-water interface (SWI) in mining-impacted lakes through adsorption and/or co-precipitation with authigenic iron (Fe)-(oxy)hydroxides or sulfides. The results of this study demonstrate that the accumulation of organic matter (OM) in near-surface sediments also influences the mobility and fate of As in sub-Arctic lakes. Sediment gravity cores, sediment grab samples, and porewaters were collected from three lakes downstream of the former Tundra gold mine, Northwest Territories, Canada. Analysis of sediment using combined micro-X-ray fluorescence/diffraction, K-edge X-ray Absorption Near-Edge Structure (XANES), and organic petrography shows that As is associated with both aquatic (benthic and planktonic alginate) and terrestrially derived OM (e.g., cutinite, funginite). Most As is hosted by fine-grained Fe-(oxy)hydroxides or sulfide minerals (e.g., goethite, orpiment, lepidocrocite, and mackinawite); however, grain-scale synchrotron-based analysis shows that As is also associated with amorphous OM. Mixed As oxidation states in porewater (median = 62% As (V), 18% As (III); n = 20) and sediment (median = 80% As (-I) and (III), 20% As (V); n = 9) indicate the presence of variable redox conditions in the near-surface sediment and suggest that post-depositional remobilization of As has occurred. Detailed characterization of As-bearing OM at and below the SWI suggests that OM plays an important role in stabilizing redox-sensitive authigenic minerals and associated As. Based on these findings, it is expected that increased concentrations of labile OM will drive post-depositional surface enrichment of As in mining-impacted lakes and may increase or decrease As flux from sediments to overlying surface waters., Supplementary Information: The online version contains supplementary material available at 10.1007/s12665-022-10213-2., Competing Interests: Conflict of interestThe authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© The Author(s) 2022.)
- Published
- 2022
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13. Antimicrobial Resistance Creates Threat to Chimpanzee Health and Conservation in the Wild.
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Parsons MB, Travis DA, Lonsdorf EV, Lipende I, Elchoufi D, Gilagiza B, Collins A, Kamenya S, Tauxe RV, and Gillespie TR
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Infectious disease is recognized as the greatest threat to the endangered chimpanzees made famous by the groundbreaking work of Dr. Jane Goodall at Gombe National Park (GNP), Tanzania. The permeable boundary of this small protected area allows for regular wildlife-human and wildlife-domestic animal overlap, which may facilitate cross-species transmission of pathogens and antimicrobial resistance. Few studies have examined the prevalence of antimicrobial resistance in wild ape populations. We used molecular techniques to investigate the presence of genes conferring resistance to sulfonamides (often used to treat diarrheal illness in human settings in this region) and tetracycline (used in the past-though much less so now) in fecal specimens from humans, domestic animals, chimpanzees, and baboons in and around GNP. We also tested stream water used by these groups. Sulfonamide resistance was common in humans (74%), non-human primates (43%), and domestic animals (17%). Tetracycline resistance was less common in all groups: humans (14%), non-human primates (3%), and domestic animals (6%). Sul resistance genes were detected from 4/22 (18%) of streams sampled. Differences in sul gene frequencies did not vary by location in humans nor in chimpanzees.
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- 2021
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14. Automated Detection of Stressful Conversations Using Wearable Physiological and Inertial Sensors.
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Bari R, Rahman MM, Saleheen N, Parsons MB, Buder EH, and Kumar S
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Stressful conversation is a frequently occurring stressor in our daily life. Stressors not only adversely affect our physical and mental health but also our relationships with family, friends, and coworkers. In this paper, we present a model to automatically detect stressful conversations using wearable physiological and inertial sensors. We conducted a lab and a field study with cohabiting couples to collect ecologically valid sensor data with temporally-precise labels of stressors. We introduce the concept of stress cycles, i.e., the physiological arousal and recovery, within a stress event. We identify several novel features from stress cycles and show that they exhibit distinguishing patterns during stressful conversations when compared to physiological response due to other stressors. We observe that hand gestures also show a distinct pattern when stress occurs due to stressful conversations. We train and test our model using field data collected from 38 participants. Our model can determine whether a detected stress event is due to a stressful conversation with an F1-score of 0.83, using features obtained from only one stress cycle, facilitating intervention delivery within 3.9 minutes since the start of a stressful conversation.
- Published
- 2020
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15. Factors associated with typical enteropathogenic Escherichia coli infection among children <5 years old with moderate-to-severe diarrhoea in rural western Kenya, 2008-2012.
- Author
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Fagerli K, Omore R, Kim S, Ochieng JB, Ayers TL, Juma J, Farag TH, Nasrin D, Panchalingam S, Robins-Browne RM, Nataro JP, Kotloff KL, Levine MM, Oundo J, Parsons MB, Laserson KF, Mintz ED, Breiman RF, and O'Reilly CE
- Subjects
- Case-Control Studies, Child Nutrition Disorders, Child, Preschool, Diarrhea epidemiology, Enteropathogenic Escherichia coli, Escherichia coli Infections epidemiology, Escherichia coli Infections mortality, Female, Humans, Infant, Infant, Newborn, Kenya epidemiology, Male, Diarrhea microbiology, Escherichia coli Infections microbiology
- Abstract
Typical enteropathogenic Escherichia coli (tEPEC) infection is a major cause of diarrhoea and contributor to mortality in children <5 years old in developing countries. Data were analysed from the Global Enteric Multicenter Study examining children <5 years old seeking care for moderate-to-severe diarrhoea (MSD) in Kenya. Stool specimens were tested for enteric pathogens, including by multiplex polymerase chain reaction for gene targets of tEPEC. Demographic, clinical and anthropometric data were collected at enrolment and ~60-days later; multivariable logistic regressions were constructed. Of 1778 MSD cases enrolled from 2008 to 2012, 135 (7.6%) children tested positive for tEPEC. In a case-to-case comparison among MSD cases, tEPEC was independently associated with presentation at enrolment with a loss of skin turgor (adjusted odds ratio (aOR) 2.08, 95% confidence interval (CI) 1.37-3.17), and convulsions (aOR 2.83, 95% CI 1.12-7.14). At follow-up, infants with tEPEC compared to those without were associated with being underweight (OR 2.2, 95% CI 1.3-3.6) and wasted (OR 2.5, 95% CI 1.3-4.6). Among MSD cases, tEPEC was associated with mortality (aOR 2.85, 95% CI 1.47-5.55). This study suggests that tEPEC contributes to morbidity and mortality in children. Interventions aimed at defining and reducing the burden of tEPEC and its sequelae should be urgently investigated, prioritised and implemented.
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- 2020
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16. Influence of late-Holocene climate change on the solid-phase speciation and long-term stability of arsenic in sub-Arctic lake sediments.
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Miller CB, Parsons MB, Jamieson HE, Ardakani OH, Gregory BRB, and Galloway JM
- Abstract
Sediment cores were collected from two lakes in the Courageous Lake Greenstone Belt (CLGB), central Northwest Territories, Canada, to examine the influence of late-Holocene warming on the transport and fate of arsenic (As) in sub-Arctic lakes. In both lakes, allochthonous As-bearing minerals (i.e. arsenopyrite and scorodite) were identified in sediment deposited during times of both regional warming and cooling, suggesting that weathering of bedrock and derived surficial materials provides a continual source of As to lakes of the CLGB. However, maximum porewater As (84 μg·L
-1 and 15 μg·L-1 ) and reactive organic matter (OM; aquatic and terrestrial-derived) concentrations in each lake are coincident with known periods of regional climate warming. It is inferred that increased biological production in surface waters and influx of terrigenous OM led to the release of sedimentary As to porewater through reductive dissolution of As-bearing Fe-(oxy)hydroxides and scorodite during episodes of regional warming. Elevated sedimentary As concentrations (median: 36 mg·kg-1 ; range: 29 to 49 mg·kg-1 ) are observed in sediment coeval with the Holocene Thermal Maximum (ca. 5430 ± 110 to 4070 ± 130 cal. years BP); at these depths, authigenic As-bearing framboidal pyrite is the primary host of As in sediment and the influence of organic matter on the precipitation of As-bearing framboidal pyrite is apparent petrographically. These findings suggest that increased biological productivity and weathering of terrestrial OM associated with climate warming influences redox cycles in the near-surface sediment and enhances the mobility of As in northern lakes. Knowledge generated from this study is relevant for predicting future climate change-driven variations in metal(loid) cycling in aquatic systems and can be used to interpret trends in long-term environmental monitoring data at historical, modern, and future metal mines in northern environments., Competing Interests: Declaration of competing interest All authors have no conflicts of interest to disclose., (Crown Copyright © 2019. Published by Elsevier B.V. All rights reserved.)- Published
- 2020
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17. Mapping typical and hypokinetic dysarthric speech production network using a connected speech paradigm in functional MRI.
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Narayana S, Parsons MB, Zhang W, Franklin C, Schiller K, Choudhri AF, Fox PT, LeDoux MS, and Cannito M
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- Adult, Brain Mapping methods, Comprehension physiology, Female, Humans, Magnetic Resonance Imaging methods, Male, Voice Disorders physiopathology, Young Adult, Brain physiopathology, Dysarthria physiopathology, Speech physiology, Speech Disorders physiopathology
- Abstract
We developed a task paradigm whereby subjects spoke aloud while minimizing head motion during functional MRI (fMRI) in order to better understand the neural circuitry involved in motor speech disorders due to dysfunction of the central nervous system. To validate our overt continuous speech paradigm, we mapped the speech production network (SPN) in typical speakers (n = 19, 10 females) and speakers with hypokinetic dysarthria as a manifestation of Parkinson disease (HKD; n = 21, 8 females) in fMRI. We then compared it with the SPN derived during overt speech production by
15 O-water PET in the same group of typical speakers and another HKD cohort (n = 10, 2 females). The fMRI overt connected speech paradigm did not result in excessive motion artifacts and successfully identified the same brain areas demonstrated in the PET studies in the two cohorts. The SPN derived in fMRI demonstrated significant spatial overlap with the corresponding PET derived maps (typical speakers: r = 0.52; speakers with HKD: r = 0.43) and identified the components of the neural circuit of speech production belonging to the feedforward and feedback subsystems. The fMRI study in speakers with HKD identified significantly decreased activity in critical feedforward (bilateral dorsal premotor and motor cortices) and feedback (auditory and somatosensory areas) subsystems replicating previous PET study findings in this cohort. These results demonstrate that the overt connected speech paradigm is feasible during fMRI and can accurately localize the neural substrates of typical and disordered speech production. Our fMRI paradigm should prove useful for study of motor speech and voice disorders, including stuttering, apraxia of speech, dysarthria, and spasmodic dysphonia., (Copyright © 2020 The Author(s). Published by Elsevier Inc. All rights reserved.)- Published
- 2020
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18. Incidence and etiology of infectious diarrhea from a facility-based surveillance system in Guatemala, 2008-2012.
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Arvelo W, Hall AJ, Henao O, Lopez B, Bernart C, Moir JC, Reyes L, Montgomery SP, Morgan O, Estevez A, Parsons MB, Lopez MR, Gomez G, Vinje J, Gregoricus N, Parashar U, Mintz ED, McCracken J, Bryan JP, and Lindblade KA
- Subjects
- Adolescent, Adult, Child, Child, Preschool, Feces microbiology, Feces parasitology, Feces virology, Female, Guatemala epidemiology, Humans, Incidence, Infant, Laboratories, Male, Middle Aged, Young Adult, Dysentery epidemiology, Dysentery etiology, Public Health Surveillance methods
- Abstract
Background: Diarrhea is a major cause of morbidity and mortality, yet incidence and etiology data are limited. We conducted laboratory-based diarrhea surveillance in Guatemala., Methods: A diarrhea case was defined as ≥3 loose stools in a 24-h period in a person presenting to the surveillance facilities. Epidemiologic data and stool specimens were collected. Specimens were tested for bacterial, parasitic, and viral pathogens. Yearly incidence was adjusted for healthcare seeking behaviors determined from a household survey conducted in the surveillance catchment area., Results: From November 2008 to December 2012, the surveillance system captured 5331 diarrhea cases; among these 1381 (26%) had specimens tested for all enteric pathogens of interest. The adjusted incidence averaged 659 diarrhea cases per 10,000 persons per year, and was highest among children aged < 5 years, averaging 1584 cases per 10,000 children per year. Among 1381 (26%) specimens tested for all the pathogens of interest, 235 (17%) had a viral etiology, 275 (20%) had a bacterial, 50 (4%) had parasites, and 86 (6%) had co-infections. Among 827 (60%) specimens from children aged < 5 years, a virus was identified in 196 (23%) patients; 165 (20%) had norovirus and 99 (12%) rotavirus, including co-infections. Among 554 patients aged ≥5 years, 103 (19%) had a bacterial etiology, including diarrheagenic Escherichia coli in 94 (17%) cases, Shigella spp. in 31 (6%), Campylobacter spp. in 5 (1%), and Salmonella spp. in 4 (1%) cases. Detection of Giardia and Cryptosporidium was infrequent (73 cases; 5%)., Conclusions: There was a substantial burden of viral and bacterial diarrheal diseases in Guatemala, highlighting the importance of strengthening laboratory capacity for rapid detection and control and for evaluation of public health interventions.
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- 2019
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19. Entamoeba histolytica infection in humans, chimpanzees and baboons in the Greater Gombe Ecosystem, Tanzania.
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Deere JR, Parsons MB, Lonsdorf EV, Lipende I, Kamenya S, Collins DA, Travis DA, and Gillespie TR
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- Animals, Ecosystem, Entamoeba histolytica pathogenicity, Entamoebiasis epidemiology, Entamoebiasis transmission, Feces parasitology, Female, Humans, Male, Risk Factors, Tanzania epidemiology, Entamoebiasis veterinary, Pan troglodytes parasitology, Papio parasitology
- Abstract
Entamoeba histolytica is an enteric parasite that infects approximately 50 million people worldwide. Although E. histolytica is a zoonotic parasite that has the potential to infect nonhuman primates, such transmission is poorly understood. Consequently, this study examined whether E. histolytica is present among humans, chimpanzees and baboons living in the Greater Gombe Ecosystem (GGE), Tanzania. The primary aims were to determine patterns of E. histolytica infection in a system with human-nonhuman primate overlap and to test associations between infection status and potential risk factors of disease. Entamoeba spp. occurred in 60.3% of human, 65.6% of chimpanzee and 88.6% of baboon samples. Entamoeba histolytica occurred in 12.1% of human, 34.1% of chimpanzee and 10.9% of baboon samples. Human E. histolytica infection was associated with gastrointestinal symptoms. This was the first study to confirm the presence of E. histolytica in the GGE. The high sample prevalence of E. histolytica in three sympatric primates suggests that zoonotic transmission is possible and stresses the need for further phylogenetic studies. Interventions targeting better sanitation and hygiene practices for humans living in the GGE can help prevent E. histolytica infection in humans, while also protecting the endangered chimpanzees and other primates in this region.
- Published
- 2019
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20. The Best and Worst Things Staff Report About Behavioral Training Workshops: a Large-Scale Evaluation.
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Reid DH, Green CW, Parsons MB, and Rotholz DA
- Abstract
A variable affecting the success of staff training programs conducted by behavior analysts is trainee acceptance of the training. This study constituted a large-scale evaluation of staff acceptance of behavioral training workshops. Over a 10-year period, 646 human service staff who participated in 132 workshops were questioned regarding the best and worst thing about the workshops. The most common staff comments concerning the best thing pertained to the training content, followed closely by trainer style and then trainee activities. There were far fewer comments regarding the worst thing, with most involving aspects of the physical environment in which training occurred. Implications of the results for practitioners are offered in terms of conducting workshop training in accordance with trainees' reported preferences. Emphasis is placed on ensuring training content is specific in nature as well as new and relevant for the trainees' work situation, providing frequent demonstrations and examples, and structuring repeated opportunities for active trainee responding., Competing Interests: Conflicts of InterestThe authors declare they have no conflicts of interest., (© Association for Behavior Analysis International 2018.)
- Published
- 2018
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21. Clinical, environmental, and behavioral characteristics associated with Cryptosporidium infection among children with moderate-to-severe diarrhea in rural western Kenya, 2008-2012: The Global Enteric Multicenter Study (GEMS).
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Delahoy MJ, Omore R, Ayers TL, Schilling KA, Blackstock AJ, Ochieng JB, Moke F, Jaron P, Awuor A, Okonji C, Juma J, Farag TH, Nasrin D, Panchalingam S, Nataro JP, Kotloff KL, Levine MM, Oundo J, Roellig DM, Xiao L, Parsons MB, Laserson K, Mintz ED, Breiman RF, and O'Reilly CE
- Subjects
- Case-Control Studies, Child, Preschool, Cryptosporidiosis epidemiology, Cryptosporidiosis psychology, Cryptosporidium genetics, Cryptosporidium isolation & purification, Diarrhea epidemiology, Diarrhea psychology, Feces parasitology, Female, Humans, Infant, Kenya epidemiology, Male, Prospective Studies, Rural Population, Cryptosporidiosis parasitology, Cryptosporidium physiology, Diarrhea parasitology
- Abstract
Background: Cryptosporidium is a leading cause of moderate-to-severe diarrhea (MSD) in young children in Africa. We examined factors associated with Cryptosporidium infection in MSD cases enrolled at the rural western Kenya Global Enteric Multicenter Study (GEMS) site from 2008-2012., Methodology/principal Findings: At health facility enrollment, stool samples were tested for enteric pathogens and data on clinical, environmental, and behavioral characteristics collected. Each child's health status was recorded at 60-day follow-up. Data were analyzed using logistic regression. Of the 1,778 children with MSD enrolled as cases in the GEMS-Kenya case-control study, 11% had Cryptosporidium detected in stool by enzyme immunoassay; in a genotyped subset, 81% were C. hominis. Among MSD cases, being an infant, having mucus in stool, and having prolonged/persistent duration diarrhea were associated with being Cryptosporidium-positive. Both boiling drinking water and using rainwater as the main drinking water source were protective factors for being Cryptosporidium-positive. At follow-up, Cryptosporidium-positive cases had increased odds of being stunted (adjusted odds ratio [aOR] = 1.65, 95% CI: 1.06-2.57), underweight (aOR = 2.08, 95% CI: 1.34-3.22), or wasted (aOR = 2.04, 95% CI: 1.21-3.43), and had significantly larger negative changes in height- and weight-for-age z-scores from enrollment., Conclusions/significance: Cryptosporidium contributes significantly to diarrheal illness in young children in western Kenya. Advances in point of care detection, prevention/control approaches, effective water treatment technologies, and clinical management options for children with cryptosporidiosis are needed., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2018
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22. Organic matter control on the distribution of arsenic in lake sediments impacted by ~65years of gold ore processing in subarctic Canada.
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Galloway JM, Swindles GT, Jamieson HE, Palmer M, Parsons MB, Sanei H, Macumber AL, Timothy Patterson R, and Falck H
- Abstract
Climate change is profoundly affecting seasonality, biological productivity, and hydrology in high northern latitudes. In sensitive subarctic environments exploitation of mineral resources led to contamination and it is not known how cumulative effects of resource extraction and climate warming will impact ecosystems. Gold mines near Yellowknife, Northwest Territories, subarctic Canada, operated from 1938 to 2004 and released >20,000t of arsenic trioxide (As
2 O3 ) to the environment through stack emissions. This release resulted in elevated arsenic concentrations in lake surface waters and sediments relative to Canadian drinking water standards and guidelines for the protection of aquatic life. A meta-analytical approach is used to better understand controls on As distribution in lake sediments within a 30-km radius of historic mineral processing activities. Arsenic concentrations in the near-surface sediments range from 5mg·kg-1 to over 10,000mg·kg-1 (median 81mg·kg-1 ; n=105). Distance and direction from the historic roaster stack are significantly (p<0.05) related to sedimentary As concentration, with highest As concentrations in sediments within 11km and lakes located downwind. Synchrotron-based μXRF and μXRD confirm the persistence of As2 O3 in near surface sediments of two lakes. Labile organic matter (S1) is significantly (p<0.05) related to As and S concentrations in sediments and this relationship is greatest in lakes within 11km from the mine. These relations are interpreted to reflect labile organic matter acting as a substrate for microbial growth and mediation of authigenic precipitation of As-sulphides in lakes close to the historic mine where As concentrations are highest. Continued climate warming is expected to lead to increased biological productivity and changes in organic geochemistry of lake sediments that are likely to play an important role in the mobility and fate of As in aquatic ecosystems., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2018
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23. rConverse: Moment by Moment Conversation Detection Using a Mobile Respiration Sensor.
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Bari R, Adams RJ, Rahman M, Parsons MB, Buder EH, and Kumar S
- Abstract
Monitoring of in-person conversations has largely been done using acoustic sensors. In this paper, we propose a new method to detect moment-by-moment conversation episodes by analyzing breathing patterns captured by a mobile respiration sensor. Since breathing is affected by physical and cognitive activities, we develop a comprehensive method for cleaning, screening, and analyzing noisy respiration data captured in the field environment at individual breath cycle level. Using training data collected from a speech dynamics lab study with 12 participants, we show that our algorithm can identify each respiration cycle with 96.34% accuracy even in presence of walking. We present a Conditional Random Field, Context-Free Grammar (CRF-CFG) based conversation model, called rConverse , to classify respiration cycles into speech or non-speech, and subsequently infer conversation episodes. Our model achieves 82.7% accuracy for speech/non-speech classification and it identifies conversation episodes with 95.9% accuracy on lab data using a leave-one-subject-out cross-validation. Finally, the system is validated against audio ground-truth in a field study with 32 participants. rConverse identifies conversation episodes with 71.7% accuracy on 254 hours of field data. For comparison, the accuracy from a high-quality audio-recorder on the same data is 71.9%.
- Published
- 2018
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24. Zoonotic Disease Programs for Enhancing Global Health Security.
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Belay ED, Kile JC, Hall AJ, Barton-Behravesh C, Parsons MB, Salyer S, and Walke H
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- Animals, Communicable Diseases, Emerging epidemiology, Communicable Diseases, Emerging prevention & control, Communicable Diseases, Emerging transmission, Disease Outbreaks, Humans, Laboratories, Zoonoses transmission, Capacity Building, Global Health, Public Health Surveillance methods, Zoonoses epidemiology, Zoonoses prevention & control
- Abstract
Most infectious diseases that recently emerged in humans originated in animals. Besides close contact between animals and humans, other factors probably contribute to the cross-species transmission of infectious diseases. It is critical to establish effective mechanisms for coordination and collaboration between the animal, human, and environmental health sectors before new threats emerge by bringing the different sectors together to tackle endemic zoonotic diseases of greatest concern. Such multisectoral partnerships should begin by identifying priority zoonotic diseases for national engagement with equal input from the different sectors. Improvements in surveillance and data sharing for prioritized zoonotic diseases and enhancements of laboratory testing and joint outbreak response capacities in the human and animal health sectors will create and strengthen the mechanisms necessary to effectively detect and respond to emerging health threats, and thereby enhance global health security.
- Published
- 2017
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25. Animal-related factors associated with moderate-to-severe diarrhea in children younger than five years in western Kenya: A matched case-control study.
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Conan A, O'Reilly CE, Ogola E, Ochieng JB, Blackstock AJ, Omore R, Ochieng L, Moke F, Parsons MB, Xiao L, Roellig D, Farag TH, Nataro JP, Kotloff KL, Levine MM, Mintz ED, Breiman RF, Cleaveland S, and Knobel DL
- Subjects
- Animal Husbandry, Animals, Case-Control Studies, Chickens, Child, Preschool, Diarrhea microbiology, Diarrhea parasitology, Diarrhea virology, Family Characteristics, Female, Humans, Infant, Infant, Newborn, Kenya epidemiology, Logistic Models, Male, Multivariate Analysis, Risk Factors, Rodentia, Rural Population, Severity of Illness Index, Sheep, Domestic, Zoonoses epidemiology, Animals, Domestic microbiology, Animals, Domestic parasitology, Animals, Domestic virology, Diarrhea epidemiology, Feces microbiology, Hand Disinfection
- Abstract
Background: Diarrheal disease remains among the leading causes of global mortality in children younger than 5 years. Exposure to domestic animals may be a risk factor for diarrheal disease. The objectives of this study were to identify animal-related exposures associated with cases of moderate-to-severe diarrhea (MSD) in children in rural western Kenya, and to identify the major zoonotic enteric pathogens present in domestic animals residing in the homesteads of case and control children., Methodology/principal Findings: We characterized animal-related exposures in a subset of case and control children (n = 73 pairs matched on age, sex and location) with reported animal presence at home enrolled in the Global Enteric Multicenter Study in western Kenya, and analysed these for an association with MSD. We identified potentially zoonotic enteric pathogens in pooled fecal specimens collected from domestic animals resident at children's homesteads. Variables that were associated with decreased risk of MSD were washing hands after animal contact (matched odds ratio [MOR] = 0.2; 95% CI 0.08-0.7), and presence of adult sheep that were not confined in a pen overnight (MOR = 0.1; 0.02-0.5). Variables that were associated with increased risk of MSD were increasing number of sheep owned (MOR = 1.2; 1.0-1.5), frequent observation of fresh rodent excreta (feces/urine) outside the house (MOR = 7.5; 1.5-37.2), and participation of the child in providing water to chickens (MOR = 3.8; 1.2-12.2). Of 691 pooled specimens collected from 2,174 domestic animals, 159 pools (23%) tested positive for one or more potentially zoonotic enteric pathogens (Campylobacter jejuni, C. coli, non-typhoidal Salmonella, diarrheagenic E. coli, Giardia, Cryptosporidium, or rotavirus). We did not find any association between the presence of particular pathogens in household animals, and MSD in children., Conclusions and Significance: Public health agencies should continue to promote frequent hand washing, including after animal contact, to reduce the risk of MSD. Future studies should address specific causal relations of MSD with sheep and chicken husbandry practices, and with the presence of rodents.
- Published
- 2017
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26. Factors Associated with the Duration of Moderate-to-Severe Diarrhea among Children in Rural Western Kenya Enrolled in the Global Enteric Multicenter Study, 2008-2012.
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Schilling KA, Omore R, Derado G, Ayers T, Ochieng JB, Farag TH, Nasrin D, Panchalingam S, Nataro JP, Kotloff KL, Levine MM, Oundo J, Parsons MB, Bopp C, Laserson K, Stauber CE, Rothenberg R, Breiman RF, O'Reilly CE, and Mintz ED
- Subjects
- Case-Control Studies, Child, Preschool, Female, Humans, Infant, Kenya epidemiology, Male, Risk Factors, Diarrhea epidemiology, Diarrhea pathology
- Abstract
Diarrheal disease is a leading cause of death among young children worldwide. As rates of acute diarrhea (AD; 1-6 days duration) have decreased, persistent diarrhea (PD; > 14 days duration) accounts for a greater proportion of the diarrheal disease burden. We describe factors associated with the duration of moderate-to-severe diarrhea in Kenyan children < 5 years old enrolled in the Global Enteric Multicenter Study. We found 587 (58%) children experienced AD, 360 (35%) had prolonged acute diarrhea (ProAD; 7-13 days duration), and 73 (7%) had PD. We constructed a Cox proportional hazards model to identify factors associated with diarrheal duration. Risk factors independently associated with longer diarrheal duration included infection with Cryptosporidium (hazard ratio [HR]: 0.868, P = 0.035), using an unimproved drinking water source (HR: 0.87, P = 0.035), and being stunted at enrollment (HR: 0.026, P < 0.0001). Diarrheal illness of extended duration appears to be multifactorial; given its association with adverse health and development outcomes, effective strategies should be implemented to reduce the duration and severity of diarrheal illness. Effective treatments for Cryptosporidium should be identified, interventions to improve drinking water are imperative, and nutrition should be improved through exclusive breastfeeding in infants ≤ 6 months and appropriate continued feeding practices for ill children.
- Published
- 2017
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27. Vibriosis, not cholera: toxigenic Vibrio cholerae non-O1, non-O139 infections in the United States, 1984-2014.
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Crowe SJ, Newton AE, Gould LH, Parsons MB, Stroika S, Bopp CA, Freeman M, Greene K, and Mahon BE
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- Adolescent, Adult, Aged, Aged, 80 and over, Female, Humans, Male, Middle Aged, United States epidemiology, Vibrio Infections microbiology, Young Adult, Vibrio Infections epidemiology, Vibrio cholerae non-O1 physiology
- Abstract
Toxigenic strains of Vibrio cholerae serogroups O1 and O139 have caused cholera epidemics, but other serogroups - such as O75 or O141 - can also produce cholera toxin and cause severe watery diarrhoea similar to cholera. We describe 31 years of surveillance for toxigenic non-O1, non-O139 infections in the United States and map these infections to the state where the exposure probably originated. While serogroups O75 and O141 are closely related pathogens, they differ in how and where they infect people. Oysters were the main vehicle for O75 infection. The vehicles for O141 infection include oysters, clams, and freshwater in lakes and rivers. The patients infected with serogroup O75 who had food traceback information available ate raw oysters from Florida. Patients infected with O141 ate oysters from Florida and clams from New Jersey, and those who only reported being exposed to freshwater were exposed in Arizona, Michigan, Missouri, and Texas. Improving the safety of oysters, specifically, should help prevent future illnesses from these toxigenic strains and similar pathogenic Vibrio species. Post-harvest processing of raw oysters, such as individual quick freezing, heat-cool pasteurization, and high hydrostatic pressurization, should be considered.
- Published
- 2016
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28. Epidemiology, Seasonality and Factors Associated with Rotavirus Infection among Children with Moderate-to-Severe Diarrhea in Rural Western Kenya, 2008-2012: The Global Enteric Multicenter Study (GEMS).
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Omore R, Tate JE, O'Reilly CE, Ayers T, Williamson J, Moke F, Schilling KA, Awuor AO, Jaron P, Ochieng JB, Oundo J, Parashar UD, Parsons MB, Bopp CC, Nasrin D, Farag TH, Kotloff KL, Nataro JP, Panchalingam S, Levine MM, Laserson KF, Nuorti JP, Mintz ED, and Breiman RF
- Subjects
- Antigens, Viral analysis, Case-Control Studies, Child, Preschool, Diarrhea epidemiology, Diarrhea pathology, Feces virology, Female, Hospitalization, Humans, Infant, Infant, Newborn, Kenya epidemiology, Logistic Models, Male, Prospective Studies, Rotavirus isolation & purification, Rotavirus metabolism, Rotavirus Infections diagnosis, Rotavirus Infections mortality, Rural Population, Severity of Illness Index, Survival Rate, Vomiting etiology, Diarrhea etiology, Rotavirus Infections complications, Rotavirus Infections epidemiology, Seasons
- Abstract
Objective: To evaluate factors associated with rotavirus diarrhea and to describe severity of illness among children <5 years old with non-dysenteric, moderate-to-severe diarrhea (MSD) in rural western Kenya., Methods: We analyzed data from children <5 years old with non-dysenteric MSD enrolled as cases in the Global Enteric Multicenter Study (GEMS) in Kenya. A non-dysenteric MSD case was defined as a child with ≥3 loose stools in 24 hrs. and one or more of the following: sunken eyes, skin tenting, intravenous rehydration, or hospitalization, who sought care at a sentinel health center within 7 days of illness onset. Rotavirus antigens in stool samples were detected by ELISA. Demographic and clinical information was collected at enrollment and during a single follow-up home visit at approximately 60 days. We analyzed diarrhea severity using a GEMS 17 point numerical scoring system adapted from the Vesikari score. We used logistic regression to evaluate factors associated with rotavirus infection., Results: From January 31, 2008 to September 30, 2012, among 1,637 (92%) non-dysenteric MSD cases, rotavirus was detected in stools of 245 (15.0%). Rotavirus-positive compared with negative cases were: younger (median age, 8 vs. 13 months; p<0.0001), had more severe illness (median severity score, 9 vs 8; p<0.0001) and had to be hospitalized more frequently (37/245 [15.1%] vs. 134/1,392 [9.6%]), p <0.013). Independent factors associated with rotavirus infection included age 0-11 months old (aOR = 5.29, 95% CI 3.14-8.89) and presenting with vomiting ≥3 times/24hrs (aOR = 2.58, 95% CI [1.91-3.48]). Rotavirus was detected more commonly in warm and dry months than in the cool and rainy months (142/691 [20%] vs 70/673 [10%]) p<0.0001)., Conclusions: Diarrhea caused by rotavirus is associated with severe symptoms leading to hospitalization. Consistent with other settings, infants had the greatest burden of disease.
- Published
- 2016
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29. Familiarizing New Staff for Working with Adults with Severe Disabilities: a Case for Relationship Building.
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Parsons MB, Bentley E, Solari T, and Reid DH
- Abstract
In human service agencies, situations exist at various times in which consumers are not familiar with the staff who work with them. We evaluated effects of familiar versus unfamiliar staff working with two men with severe disabilities in a vocational program. Results indicated both participants displayed more compliance with familiar staff relative to unfamiliar staff and one exhibited more on-task (one was near ceiling levels with both staff). Subsequently, a familiarization process was conducted with four new staff before working with four men with severe disabilities that involved spending time with a participant in a preferred activity and phasing in to the participant's routine. Each staff worked with one participant after being familiarized and concurrently with another without being familiarized. In all but one case, participant compliance was greater with the familiarized staff. Except when on-task was near ceiling levels, it also was higher with the familiarized staff. Additionally, results offered some support for the existence of a good relationship between familiarized staff and participants in terms of more participant happiness indices than with unfamiliar staff and, to a smaller degree, less unhappiness indices and problem behavior. Implications for practitioners are discussed, including being aware of potential problems when unfamiliar staff work with adults with severe disabilities and considering familiarizing new staff prior to working with individuals. Discussion also addresses how more attention could be directed to relationship development from a practitioner and research perspective., Competing Interests: Compliance with Ethical Standards Funding There was no external funding for this research. Conflict of Interest Each author declares no conflict of interest. Human and Animal Rights and Informed Consent All procedures were performed in accordance with the ethical standards of the institutional research committee and the 1964 Helsinki declaration and comparable standards. All required informed consent was obtained for participants in the study.
- Published
- 2016
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30. Real-Time TaqMan PCR Assay for the Detection of Heat-Labile and Heat-Stable Enterotoxin Genes in a Geographically Diverse Collection of Enterotoxigenic Escherichia coli Strains and Stool Specimens.
- Author
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Pattabiraman V, Parsons MB, and Bopp CA
- Subjects
- Centers for Disease Control and Prevention, U.S., DNA, Bacterial isolation & purification, DNA, Bacterial metabolism, Disease Outbreaks, Enterotoxigenic Escherichia coli classification, Enterotoxigenic Escherichia coli isolation & purification, Enterotoxigenic Escherichia coli metabolism, Enterotoxins chemistry, Enterotoxins metabolism, Epidemiological Monitoring, Escherichia coli Infections diagnosis, Escherichia coli Infections epidemiology, Escherichia coli Proteins chemistry, Escherichia coli Proteins metabolism, Feces microbiology, Hot Temperature, Humans, Limit of Detection, Molecular Typing, Multiplex Polymerase Chain Reaction, Protein Stability, Real-Time Polymerase Chain Reaction, Reproducibility of Results, Reverse Transcriptase Polymerase Chain Reaction, Sensitivity and Specificity, Time Factors, United States epidemiology, Dysentery microbiology, Enterotoxigenic Escherichia coli genetics, Enterotoxins genetics, Escherichia coli Infections microbiology, Escherichia coli Proteins genetics
- Abstract
Enterotoxigenic Escherichia coli (ETEC) are an important cause of diarrhea in children under the age of 5 years in developing countries and are the leading bacterial agent of traveler's diarrhea in persons traveling to these countries. ETEC strains secrete heat-labile (LT) and/or heat-stable (ST) enterotoxins that induce diarrhea by causing water and electrolyte imbalance. We describe the validation of a real-time TaqMan PCR (RT-PCR) assay to detect LT, ST1a, and ST1b enterotoxin genes in E. coli strains and in stool specimens. We validated LT/ST1b duplex and ST1a single-plex RT-PCR assay using a conventional PCR assay as a gold standard with 188 ETEC strains and 42 non-ETEC strains. We validated LT/ST1b duplex and ST1a single-plex RT-PCR assay in stool specimens (n = 106) using traditional culture as the gold standard. RT- PCR assay sensitivities for LT, ST1a, and ST1b detection in strains were 100%, 100%, and 98%; specificities were 95%, 98%, and 99%, and Pearson correlation coefficient r was 0.9954 between RT-PCR assay and the gold standard. In stool specimens, RT-PCR assay sensitivities for LT, ST1a, and ST1b detection were 97%, 100%, and 97%; and specificities were 99%, 94%, and 97%. Pearson correlation coefficient r was 0.9975 between RT-PCR results in stool specimens and the gold standard. Limits of detection of LT, ST1a, and ST1b by RT-PCR assay were 0.1 to1.0 pg/μL and by conventional PCR assay were 100 to1000 pg/μL. The accuracy, rapidity and sensitivity of this RT-PCR assay is promising for ETEC detection in public health/clinical laboratories and for laboratories in need of an independent method to confirm results of other culture independent diagnostic tests.
- Published
- 2016
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31. Maintaining Staff Performance Following a Training Intervention: Suggestions from a 30-Year Case Example.
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Reid DH, Parsons MB, and Jensen JM
- Abstract
A frequent challenge encountered by behavior analysts in human service agencies is maintaining effects of their training interventions with agency staff. A case example is provided to illustrate how effects of a staff training intervention initiated by a behavior analyst maintained for an extended period in a center-based program for adolescents and adults with severe disabilities. The process involved the behavior analyst working closely with the program supervisor and a professional staff member in a collaborative team approach to increase involvement of center participants in functional (vs. nonfunctional) educational tasks. Initially, the team jointly developed an intervention to increase staffs' provision of functional tasks. The behavior analyst subsequently worked with the team members regarding how to implement the intervention by training their staff and providing feedback. The two team members then continued providing feedback during their respective supervisor tenures without continued presence of the behavior analyst. Results indicated that initial increases in participant involvement in functional tasks maintained during follow-up observations encompassing 30 years. Normative comparisons also showed that the levels were well above the level of functional task involvement in other center-based programs across that time period. Results are discussed regarding recommendations for behavior analysts to use a collaborative team approach with supervisors indigenous to an agency to help maintain staff behavior targeted for change by the behavior analysts.
- Published
- 2015
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32. Emergence of Community-Acquired, Multidrug-Resistant Invasive Nontyphoidal Salmonella Disease in Rural Western Kenya, 2009-2013.
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Oneko M, Kariuki S, Muturi-Kioi V, Otieno K, Otieno VO, Williamson JM, Folster J, Parsons MB, Slutsker L, Mahon BE, and Hamel MJ
- Subjects
- Anti-Bacterial Agents pharmacology, Bacteremia complications, Bacteremia epidemiology, Bacteremia microbiology, Ceftriaxone pharmacology, Child, Preschool, Female, HIV Infections complications, HIV Infections microbiology, Hospitalization statistics & numerical data, Humans, Incidence, Infant, Kenya epidemiology, Malaria, Male, Outpatients statistics & numerical data, Residence Characteristics statistics & numerical data, Rural Population statistics & numerical data, Salmonella Infections complications, Salmonella Infections mortality, Time Factors, Drug Resistance, Multiple, Bacterial, Salmonella Infections epidemiology, Salmonella Infections microbiology, Salmonella enterica drug effects
- Abstract
Background: Nontyphoidal Salmonella (NTS), mainly serotypes Typhimurium and Enteritidis, cause invasive infections with high mortality in children in sub-Saharan Africa. Multidrug resistance is common, and resistance to third-generation cephalosporins has emerged., Methods: We reviewed clinical features, outcomes, and antimicrobial resistance patterns in invasive NTS infections among children aged 6 weeks to 5 years participating in malaria vaccine studies in an area of high malaria and human immunodeficiency virus (HIV) transmission in Siaya, western Kenya. Blood culture was performed in hospitalized children and pediatric outpatients with prolonged fever., Results: From July 2009 to December 2013, 1696 children aged 6 weeks to 17 months were enrolled into vaccine trials and followed for up to 53 months. We obtained 1692 blood cultures from 847 children. Of 134 bacterial pathogens isolated, 102 (76.1%) were Salmonella serogroup B or D. Invasive NTS disease occurred in 94 (5.5%) children, with an incidence of 1870, 4134, and 6510 episodes per 100 000 person-years overall, in infants, and in HIV-infected children, respectively. Malaria infection within the past 2 weeks occurred in 18.8% (3/16) of invasive NTS episodes in HIV-infected and 66.2% (53/80) in HIV-uninfected children. Case fatality rate was 3.1%. Salmonella group B resistant to ceftriaxone emerged in 2009 and 2010 (6.2% [2/32 isolates]), rising to 56.5% (13/23 isolates) in 2012 and 2013., Conclusions: Incidence of invasive NTS disease was high in this area of high malaria and HIV transmission, especially in HIV-infected children. Rapidly emerging resistance against ceftriaxone requires urgent reevaluation of antibiotic recommendations and primary prevention of exposure to Salmonella., (© The Author 2015. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2015
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33. Insights into the environmental reservoir of pathogenic Vibrio parahaemolyticus using comparative genomics.
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Hazen TH, Lafon PC, Garrett NM, Lowe TM, Silberger DJ, Rowe LA, Frace M, Parsons MB, Bopp CA, Rasko DA, and Sobecky PA
- Abstract
Vibrio parahaemolyticus is an aquatic halophilic bacterium that occupies estuarine and coastal marine environments, and is a leading cause of seafood-borne food poisoning cases. To investigate the environmental reservoir and potential gene flow that occurs among V. parahaemolyticus isolates, the virulence-associated gene content and genome diversity of a collection of 133 V. parahaemolyticus isolates were analyzed. Phylogenetic analysis of housekeeping genes, and pulsed-field gel electrophoresis, demonstrated that there is genetic similarity among V. parahaemolyticus clinical and environmental isolates. Whole-genome sequencing and comparative analysis of six representative V. parahaemolyticus isolates was used to identify genes that are unique to the clinical and environmental isolates examined. Comparative genomics demonstrated an O3:K6 environmental isolate, AF91, which was cultured from sediment collected in Florida in 2006, has significant genomic similarity to the post-1995 O3:K6 isolates. However, AF91 lacks the majority of the virulence-associated genes and genomic islands associated with these highly virulent post-1995 O3:K6 genomes. These findings demonstrate that although they do not contain most of the known virulence-associated regions, some V. parahaemolyticus environmental isolates exhibit significant genetic similarity to clinical isolates. This highlights the dynamic nature of the V. parahaemolyticus genome allowing them to transition between aquatic and host-pathogen states.
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- 2015
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34. Cholera in the United States, 2001-2011: a reflection of patterns of global epidemiology and travel.
- Author
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Loharikar A, Newton AE, Stroika S, Freeman M, Greene KD, Parsons MB, Bopp C, Talkington D, Mintz ED, and Mahon BE
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- Adolescent, Adult, Aged, Aged, 80 and over, Asia, Child, Child, Preschool, Cholera etiology, Dominican Republic, Female, Foodborne Diseases epidemiology, Foodborne Diseases microbiology, Global Health, Humans, Infant, Male, Middle Aged, Seafood microbiology, United States epidemiology, Young Adult, Cholera epidemiology, Travel
- Abstract
US cholera surveillance offers insight into global and domestic trends. Between 2001 and 2011, 111 cases were reported to the Centers for Disease Control and Prevention. Cholera was associated with international travel in 90 (81%) patients and was domestically acquired in 20 (18%) patients; for one patient, information was not available. From January 2001 to October 2010, the 42 (47%) travel-associated cases were associated with travel to Asia. In October 2010, a cholera epidemic started in Haiti, soon spreading to the Dominican Republic (Hispaniola). From then to December 2011, 40 (83%) of the 48 travel-associated cases were associated with travel to Hispaniola. Of 20 patients who acquired cholera domestically, 17 (85%) reported seafood consumption; 10 (59%) ate seafood from the US Gulf Coast. In summary, an increase in travel-associated US cholera cases was associated with epidemic cholera in Hispaniola in 2010-2011. Travel to Asia and consumption of Gulf Coast seafood remained important sources of US cholera cases.
- Published
- 2015
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35. Epidemiology and molecular characterization of Cryptosporidium spp. in humans, wild primates, and domesticated animals in the Greater Gombe Ecosystem, Tanzania.
- Author
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Parsons MB, Travis D, Lonsdorf EV, Lipende I, Roellig DM, Collins A, Kamenya S, Zhang H, Xiao L, and Gillespie TR
- Subjects
- Adult, Animals, Cross-Sectional Studies, Cryptosporidium genetics, Ecosystem, Feces parasitology, Humans, Livestock parasitology, Polymerase Chain Reaction, Primates parasitology, Risk Factors, Rivers parasitology, Rural Population, Sequence Analysis, DNA, Sheep parasitology, Swine parasitology, Tanzania epidemiology, Zoonoses parasitology, Animals, Domestic parasitology, Animals, Wild parasitology, Cryptosporidiosis epidemiology, Cryptosporidiosis transmission, Zoonoses epidemiology
- Abstract
Cryptosporidium is an important zoonotic parasite globally. Few studies have examined the ecology and epidemiology of this pathogen in rural tropical systems characterized by high rates of overlap among humans, domesticated animals, and wildlife. We investigated risk factors for Cryptosporidium infection and assessed cross-species transmission potential among people, non-human primates, and domestic animals in the Gombe Ecosystem, Kigoma District, Tanzania. A cross-sectional survey was designed to determine the occurrence and risk factors for Cryptosporidium infection in humans, domestic animals and wildlife living in and around Gombe National Park. Diagnostic PCR revealed Cryptosporidium infection rates of 4.3% in humans, 16.0% in non-human primates, and 9.6% in livestock. Local streams sampled were negative. DNA sequencing uncovered a complex epidemiology for Cryptosporidium in this system, with humans, baboons and a subset of chimpanzees infected with C. hominis subtype IfA12G2; another subset of chimpanzees infected with C. suis; and all positive goats and sheep infected with C. xiaoi. For humans, residence location was associated with increased risk of infection in Mwamgongo village compared to one camp (Kasekela), and there was an increased odds for infection when living in a household with another positive person. Fecal consistency and other gastrointestinal signs did not predict Cryptosporidium infection. Despite a high degree of habitat overlap between village people and livestock, our results suggest that there are distinct Cryptosporidium transmission dynamics for humans and livestock in this system. The dominance of C. hominis subtype IfA12G2 among humans and non-human primates suggest cross-species transmission. Interestingly, a subset of chimpanzees was infected with C. suis. We hypothesize that there is cross-species transmission from bush pigs (Potaochoerus larvatus) to chimpanzees in Gombe forest, since domesticated pigs are regionally absent. Our findings demonstrate a complex nature of Cryptosporidium in sympatric primates, including humans, and stress the need for further studies.
- Published
- 2015
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36. Complex epidemiology and zoonotic potential for Cryptosporidium suis in rural Madagascar.
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Bodager JR, Parsons MB, Wright PC, Rasambainarivo F, Roellig D, Xiao L, and Gillespie TR
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- Africa, Animals, Animals, Wild, Cattle, Cattle Diseases parasitology, Child, Coinfection, Cryptosporidiosis parasitology, Cryptosporidium genetics, Dogs, Genotype, Humans, Lemur, Livestock, Madagascar epidemiology, Male, Polymerase Chain Reaction veterinary, Polymorphism, Restriction Fragment Length, Rodent Diseases parasitology, Rodentia, Rural Population, Swine, Swine Diseases parasitology, Zoonoses parasitology, Cattle Diseases epidemiology, Cryptosporidiosis epidemiology, Cryptosporidium isolation & purification, Rodent Diseases epidemiology, Swine Diseases epidemiology
- Abstract
Cryptosporidium spp. is the most important parasitic diarrheal agent in the world, is among the top four causes of moderate-to-severe diarrheal disease in young children in developing nations, and is problematic as an opportunistic co-infection with HIV. In addition, Cryptosporidium is a persistent challenge for livestock production. Despite its zoonotic potential, few studies have examined the ecology and epidemiology of this pathogen in rural systems characterized by high rates of overlap among humans, domesticated animals, and wildlife. To improve our understanding of the zoonotic potential of Cryptosporidium species in the rural tropics, we screened humans, livestock, peridomestic rodents, and wildlife using PCR-RFLP and sequencing-based approaches to distinguish species of Cryptosporidium in rural southeastern Madagascar. Cryptosporidium of multiple species/genotypes were apparent in this study system. Interestingly, C. suis was the dominant species of Cryptosporidium in the region, infecting humans (n=1), cattle (n=18), pigs (n=3), and rodents (n=1). The broad species range of C. suis and the lack of common cattle Cryptosporidium species (Cryptosporidium parvum and Cryptosporidium andersoni) in this system are unique. This report represents the fifth confirmed case of C. suis infection in humans, and the first case in Africa. Few rural human and livestock populations have been screened for Cryptosporidium using genus-specific genotyping methods. Consequently, C. suis may be more widespread in human and cattle populations than previously believed., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2015
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37. Global positioning system data-loggers: a tool to quantify fine-scale movement of domestic animals to evaluate potential for zoonotic transmission to an endangered wildlife population.
- Author
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Parsons MB, Gillespie TR, Lonsdorf EV, Travis D, Lipende I, Gilagiza B, Kamenya S, Pintea L, and Vazquez-Prokopec GM
- Subjects
- Animals, Geographic Mapping, Humans, Population Dynamics, Seasons, Tanzania epidemiology, Animals, Domestic, Animals, Wild, Geographic Information Systems, Zoonoses epidemiology, Zoonoses transmission
- Abstract
Domesticated animals are an important source of pathogens to endangered wildlife populations, especially when anthropogenic activities increase their overlap with humans and wildlife. Recent work in Tanzania reports the introduction of Cryptosporidium into wild chimpanzee populations and the increased risk of ape mortality associated with SIVcpz-Cryptosporidium co-infection. Here we describe the application of novel GPS technology to track the mobility of domesticated animals (27 goats, 2 sheep and 8 dogs) with the goal of identifying potential routes for Cryptosporidium introduction into Gombe National Park. Only goats (5/27) and sheep (2/2) were positive for Cryptosporidium. Analysis of GPS tracks indicated that a crop field frequented by both chimpanzees and domesticated animals was a potential hotspot for Cryptosporidium transmission. This study demonstrates the applicability of GPS data-loggers in studies of fine-scale mobility of animals and suggests that domesticated animal-wildlife overlap should be considered beyond protected boundaries for long-term conservation strategies.
- Published
- 2014
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38. Multidrug-resistant IncA/C plasmid in Vibrio cholerae from Haiti.
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Folster JP, Katz L, McCullough A, Parsons MB, Knipe K, Sammons SA, Boncy J, Tarr CL, and Whichard JM
- Subjects
- Anti-Bacterial Agents pharmacology, Cholera epidemiology, Disease Outbreaks, Haiti epidemiology, Humans, Microbial Sensitivity Tests, Mutation, Vibrio cholerae drug effects, Vibrio cholerae isolation & purification, Bacterial Proteins genetics, Cholera microbiology, Drug Resistance, Multiple, Bacterial genetics, Phosphoproteins genetics, Plasmids genetics, Vibrio cholerae genetics
- Published
- 2014
- Full Text
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39. Increasing Independence Within Adult Services: a Program for Reducing Staff Completion of Daily Routines for Consumers with Developmental Disabilities.
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Towery D, Parsons MB, and Reid DH
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- 2014
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40. Burden of laboratory-confirmed Campylobacter infections in Guatemala 2008-2012: results from a facility-based surveillance system.
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Benoit SR, Lopez B, Arvelo W, Henao O, Parsons MB, Reyes L, Moir JC, and Lindblade K
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- Adolescent, Adult, Ambulatory Care Facilities, Campylobacter isolation & purification, Campylobacter Infections complications, Campylobacter Infections drug therapy, Child, Child, Preschool, Ciprofloxacin therapeutic use, Communicable Disease Control methods, Cost of Illness, Diarrhea drug therapy, Diarrhea microbiology, Feces microbiology, Female, Fluid Therapy, Guatemala epidemiology, Humans, Infant, Infant, Newborn, Male, Metronidazole therapeutic use, Microbial Sensitivity Tests, Middle Aged, Rehydration Solutions administration & dosage, Sentinel Surveillance, Young Adult, Anti-Bacterial Agents therapeutic use, Campylobacter Infections epidemiology, Diarrhea epidemiology, Drug Resistance, Multiple, Bacterial, Trimethoprim, Sulfamethoxazole Drug Combination therapeutic use
- Abstract
Introduction: Campylobacteriosis is one of the leading causes of gastroenteritis worldwide. This study describes the epidemiology of laboratory-confirmed Campylobacter diarrheal infections in two facility-based surveillance sites in Guatemala., Methods: Clinical, epidemiologic, and laboratory data were collected on patients presenting with acute diarrhea from select healthcare facilities in the departments of Santa Rosa and Quetzaltenango, Guatemala, from January 2008 through August 2012. Stool specimens were cultured for Campylobacter and antimicrobial susceptibility testing was performed on a subset of isolates. Multidrug resistance (MDR) was defined as resistance to ≥3 antimicrobial classes., Results: Campylobacter was isolated from 306 (6.0%) of 5137 stool specimens collected. For children <5 years of age, annual incidence was as high as 1288.8 per 100,000 children in Santa Rosa and 185.5 per 100,000 children in Quetzaltenango. Among 224 ambulatory care patients with Campylobacter, 169 (75.5%) received metronidazole or trimethoprim-sulfamethoxazole, and 152 (66.7%) received or were prescribed oral rehydration therapy. Antimicrobial susceptibilities were tested in 96 isolates; 57 (59.4%) were resistant to ciprofloxacin and 12 (12.5%) were MDR., Conclusion: Campylobacter was a major cause of diarrhea in children in two departments in Guatemala; antimicrobial resistance was high, and treatment regimens in the ambulatory setting which included metronidazole and trimethoprim-sulfamethoxazole and lacked oral rehydration were sub-optimal., (Published by Elsevier Ltd.)
- Published
- 2014
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41. Teaching Practitioners to Conduct Behavioral Skills Training: A Pyramidal Approach for Training Multiple Human Service Staff.
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Parsons MB, Rollyson JH, and Reid DH
- Abstract
A job responsibility of many behavior analysts that can involve significant amounts of time is training human service staff in behavior-change and related procedures. We evaluated a pyramidal approach using behavioral skills training (BST) for a trainer to train multiple staff. The BST skills of 10 practitioners in a human service setting were assessed as they trained a staff person in simulation before and after being trained (with BST) to conduct BST. Results indicated all participants improved their use of BST during the assessments following training and demonstrated proficient application of BST while training a staff person in the regular work setting. Acceptability measures suggested the training process was well received by the participants. Results are discussed regarding practical considerations with BST-based pyramidal training, including the conditions in which this training approach may be most advantageous.
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- 2013
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42. Diagnosis of Vibrio cholerae O1 infection in Africa.
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Keddy KH, Sooka A, Parsons MB, Njanpop-Lafourcade BM, Fitchet K, and Smith AM
- Subjects
- Africa epidemiology, Cholera epidemiology, Feces microbiology, Humans, Specimen Handling methods, Cholera diagnosis, Cholera microbiology, Vibrio cholerae O1 isolation & purification
- Abstract
Isolation of Vibrio cholerae O1 is necessary for cholera outbreak confirmation. Rapid diagnostic testing of fecal specimens, based on lipopolysaccharide detection of V. cholerae O1 or O139, may assist in early outbreak detection and surveillance. Cary-Blair transport medium is recommended for specimen transport. Filter paper, although used in epidemics, needs evaluation against rectal swab specimens. Fecal specimens are subcultured onto selective and nonselective media, including 5% blood agar and TCBS agar, for detection of V. cholerae O1 or O139. Suspicious, oxidase-positive isolates are serotyped in monovalent antisera. Antimicrobial-susceptibility testing is performed to detect resistance. Molecular characterization supports phenotypic identification and outbreak investigations. The presence of genes encoding cholera toxin, lipopolysaccharide, and El Tor biotype traits can be confirmed. Standardized pulsed-field gel electrophoresis analysis facilitates strain comparison. Quality management ensures reliability of results through validation and verification of functional laboratory equipment; quality control of testing procedures, laboratory reagents, and consumables; and participation in proficiency-testing schemes.
- Published
- 2013
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- View/download PDF
43. Laboratory-confirmed cholera and rotavirus among patients with acute diarrhea in four hospitals in Haiti, 2012-2013.
- Author
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Steenland MW, Joseph GA, Lucien MAB, Freeman N, Hast M, Nygren BL, Leshem E, Juin S, Parsons MB, Talkington DF, Mintz ED, Vertefeuille J, Balajee SA, Boncy J, and Katz MA
- Subjects
- Adolescent, Adult, Aged, Child, Child, Preschool, Female, Haiti epidemiology, Hospitals, Humans, Infant, Infant, Newborn, Inpatients, Male, Middle Aged, Population Surveillance, Rotavirus isolation & purification, Time Factors, Young Adult, Cholera complications, Cholera epidemiology, Diarrhea etiology, Rotavirus Infections complications, Rotavirus Infections epidemiology
- Abstract
An outbreak of cholera began in Haiti in October of 2010. To understand the progression of epidemic cholera in Haiti, in April of 2012, we initiated laboratory-enhanced surveillance for diarrheal disease in four Haitian hospitals in three departments. At each site, we sampled up to 10 hospitalized patients each week with acute watery diarrhea. We tested 1,616 specimens collected from April 2, 2012 to March 28, 2013; 1,030 (63.7%) specimens yielded Vibrio cholerae, 13 (0.8%) specimens yielded Shigella, 6 (0.4%) specimens yielded Salmonella, and 63 (3.9%) specimens tested positive for rotavirus. Additionally, 13.5% of children < 5 years old tested positive for rotavirus. Of 1,030 V. cholerae isolates, 1,020 (99.0%) isolates were serotype Ogawa, 9 (0.9%) isolates were serotype Inaba, and 1 isolate was non-toxigenic V. cholerae O139. During 1 year of surveillance, toxigenic cholera continued to be the main cause of acute diarrhea in hospitalized patients, and rotavirus was an important cause of diarrhea-related hospitalizations in children.
- Published
- 2013
- Full Text
- View/download PDF
44. Evidence-based staff training: a guide for practitioners.
- Author
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Parsons MB, Rollyson JH, and Reid DH
- Abstract
Behavior analysts in human service agencies are commonly expected to train support staff as one of their job duties. Traditional staff training is usually didactic in nature and generally has not proven particularly effective. We describe an alternative, evidence-based approach for training performance skills to human service staff. The description includes a specific means of conducting a behavioral skills training session with a group of staff followed by on-the-job training requirements. A brief case demonstration then illustrates application of the training approach and its apparent effectiveness for training staff in two distinct skill sets: use of most-to-least prompting within teaching procedures and use of manual signs. Practical issues associated with applying evidence-based behavioral training are presented with a focus on providing training that is effective, efficient, and acceptable to staff trainees.
- Published
- 2012
- Full Text
- View/download PDF
45. Biochemical, serological, and virulence characterization of clinical and oyster Vibrio parahaemolyticus isolates.
- Author
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Jones JL, Lüdeke CH, Bowers JC, Garrett N, Fischer M, Parsons MB, Bopp CA, and DePaola A
- Subjects
- Animals, Bacterial Typing Techniques, Genes, Bacterial, Humans, North America, Serotyping, Vibrio parahaemolyticus genetics, Vibrio parahaemolyticus metabolism, Virulence Factors genetics, Ostreidae microbiology, Vibrio Infections microbiology, Vibrio parahaemolyticus classification, Vibrio parahaemolyticus isolation & purification
- Abstract
In this study, 77 clinical and 67 oyster Vibrio parahaemolyticus isolates from North America were examined for biochemical profiles, serotype, and the presence of potential virulence factors (tdh, trh, and type III secretion system [T3SS] genes). All isolates were positive for oxidase, indole, and glucose fermentation, consistent with previous reports. The isolates represented 35 different serotypes, 9 of which were shared by clinical and oyster isolates. Serotypes associated with pandemic strains (O1:KUT, O1:K25, O3:K6, and O4:K68) were observed for clinical isolates, and 7 (9%) oyster isolates belonged to serotype O1:KUT. Of the clinical isolates, 27% were negative for tdh and trh, while 45% contained both genes. Oyster isolates were preferentially selected for the presence of tdh and/or trh; 34% contained both genes, 42% had trh but not tdh, and 3% had tdh but not trh. All but 1 isolate (143/144) had at least three of the four T3SS1 genes examined. The isolates lacking both tdh and trh contained no T3SS2α or T3SS2β genes. All clinical isolates positive for tdh and negative for trh possessed all T3SS2α genes, and all isolates negative for tdh and positive for trh possessed all T3SS2β genes. The two oyster isolates containing tdh but not trh possessed all but the vopB2 gene of T3SS2α, as reported previously. In contrast to the findings of previous studies, all strains examined that were positive for both tdh and trh also carried T3SS2β genes. This report identifies the serotype as the most distinguishing feature between clinical and oyster isolates. Our findings raise concerns about the reliability of the tdh, trh, and T3SS genes as virulence markers and highlight the need for more-detailed pathogenicity investigations of V. parahaemolyticus.
- Published
- 2012
- Full Text
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46. Identifying indices of happiness and unhappiness among adults with autism: potential targets for behavioral assessment and intervention.
- Author
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Parsons MB, Reid DH, Bentley E, Inman A, and Lattimore LP
- Abstract
Research is increasingly demonstrating the importance of monitoring indices of happiness as part of behavioral programs for individuals who have severe intellectual disabilities. We evaluated a practitioner-oriented process for identifying and validating individualized indices of this private event among three adults with autism who were nonvocal or minimally vocal. Caregiver surveys were administered to obtain agreement regarding behavior displayed when the individuals were happy and unhappy, as well as situations in which they were likely to experience happiness and unhappiness. Observations corroborated caregiver opinion in that participants displayed more happiness indices in situations reported to be accompanied by happiness, and for the most part, more unhappiness indices in reported unhappiness situations. Subsequent choices by each participant supported the validity of the individualized indices. Results are discussed regarding how identifying happiness indices can be a useful component of behavioral applications, as well as guidelines and cautions regarding use of the indices in routine practice.
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- 2012
- Full Text
- View/download PDF
47. Risk factors for death among children less than 5 years old hospitalized with diarrhea in rural western Kenya, 2005-2007: a cohort study.
- Author
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O'Reilly CE, Jaron P, Ochieng B, Nyaguara A, Tate JE, Parsons MB, Bopp CA, Williams KA, Vinjé J, Blanton E, Wannemuehler KA, Vulule J, Laserson KF, Breiman RF, Feikin DR, Widdowson MA, and Mintz E
- Subjects
- Age Distribution, Child, Preschool, Clinical Laboratory Techniques, Diarrhea diagnosis, Diarrhea microbiology, Female, Humans, Infant, Kenya epidemiology, Logistic Models, Male, Multivariate Analysis, Population Surveillance, Risk Factors, Child Mortality, Diarrhea epidemiology, Hospitalization statistics & numerical data, Rural Population statistics & numerical data
- Abstract
Background: Diarrhea is a leading cause of childhood morbidity and mortality in sub-Saharan Africa. Data on risk factors for mortality are limited. We conducted hospital-based surveillance to characterize the etiology of diarrhea and identify risk factors for death among children hospitalized with diarrhea in rural western Kenya., Methods and Findings: We enrolled all children <5 years old, hospitalized with diarrhea (≥3 loose stools in 24 hours) at two district hospitals in Nyanza Province, western Kenya. Clinical and demographic information was collected. Stool specimens were tested for bacterial and viral pathogens. Bivariate and multivariable logistic regression analyses were carried out to identify risk factors for death. From May 23, 2005 to May 22, 2007, 1,146 children <5 years old were enrolled; 107 (9%) children died during hospitalization. Nontyphoidal Salmonella were identified in 10% (118), Campylobacter in 5% (57), and Shigella in 4% (42) of 1,137 stool samples; rotavirus was detected in 19% (196) of 1,021 stool samples. Among stools from children who died, nontyphoidal Salmonella were detected in 22%, Shigella in 11%, rotavirus in 9%, Campylobacter in 5%, and S. Typhi in <1%. In multivariable analysis, infants who died were more likely to have nontyphoidal Salmonella (adjusted odds ratio [aOR] = 6·8; 95% CI 3·1-14·9), and children <5 years to have Shigella (aOR = 5·5; 95% CI 2·2-14·0) identified than children who survived. Children who died were less likely to be infected with rotavirus (OR = 0·4; 95% CI 0·2-0·8). Further risk factors for death included being malnourished (aOR = 4·2; 95% CI 2·1-8·7); having oral thrush on physical exam (aOR = 2·3; 95% CI 1·4-3·8); having previously sought care at a hospital for the illness (aOR = 2·2; 95% CI 1·2-3·8); and being dehydrated as diagnosed at discharge/death (aOR = 2·5; 95% CI 1·5-4·1). A clinical diagnosis of malaria, and malaria parasites seen on blood smear, were not associated with increased risk of death. This study only captured in-hospital childhood deaths, and likely missed a substantial number of additional deaths that occurred at home., Conclusion: Nontyphoidal Salmonella and Shigella are associated with mortality among rural Kenyan children with diarrhea who access a hospital. Improved prevention and treatment of diarrheal disease is necessary. Enhanced surveillance and simplified laboratory diagnostics in Africa may assist clinicians in appropriately treating potentially fatal diarrheal illness.
- Published
- 2012
- Full Text
- View/download PDF
48. Characterization of toxigenic Vibrio cholerae from Haiti, 2010-2011.
- Author
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Talkington D, Bopp C, Tarr C, Parsons MB, Dahourou G, Freeman M, Joyce K, Turnsek M, Garrett N, Humphrys M, Gomez G, Stroika S, Boncy J, Ochieng B, Oundo J, Klena J, Smith A, Keddy K, and Gerner-Smidt P
- Subjects
- Alleles, Bacterial Typing Techniques, Cholera epidemiology, Cholera Toxin genetics, Disease Outbreaks, Electrophoresis, Gel, Pulsed-Field, Genotype, Haiti epidemiology, Humans, Microbial Sensitivity Tests, Vibrio cholerae classification, Virulence, Virulence Factors genetics, Vibrio cholerae genetics, Vibrio cholerae pathogenicity
- Abstract
In October 2010, the US Centers for Disease Control and Prevention received reports of cases of severe watery diarrhea in Haiti. The cause was confirmed to be toxigenic Vibrio cholerae, serogroup O1, serotype Ogawa, biotype El Tor. We characterized 122 isolates from Haiti and compared them with isolates from other countries. Antimicrobial drug susceptibility was tested by disk diffusion and broth microdilution. Analyses included identification of rstR and VC2346 genes, sequencing of ctxAB and tcpA genes, and pulsed-field gel electrophoresis with SfiI and NotI enzymes. All isolates were susceptible to doxycycline and azithromycin. One pulsed-field gel electrophoresis pattern predominated, and ctxB sequence of all isolates matched the B-7 allele. We identified the tcpETCIRS allele, which is also present in Bangladesh strain CIRS 101. These data show that the isolates from Haiti are clonally and genetically similar to isolates originating in Africa and southern Asia and that ctxB-7 and tcpET(CIRS) alleles are undergoing global dissemination.
- Published
- 2011
- Full Text
- View/download PDF
49. Drug-resistance mechanisms in Vibrio cholerae O1 outbreak strain, Haiti, 2010.
- Author
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Sjölund-Karlsson M, Reimer A, Folster JP, Walker M, Dahourou GA, Batra DG, Martin I, Joyce K, Parsons MB, Boncy J, Whichard JM, and Gilmour MW
- Subjects
- Anti-Bacterial Agents pharmacology, Gene Order, Genome, Bacterial, Haiti epidemiology, Humans, Microbial Sensitivity Tests, Phylogeny, Vibrio cholerae O1 genetics, Vibrio cholerae O1 isolation & purification, Cholera epidemiology, Disease Outbreaks, Drug Resistance, Multiple, Bacterial genetics, Vibrio cholerae O1 drug effects
- Abstract
To increase understanding of drug-resistant Vibrio cholerae, we studied selected molecular mechanisms of antimicrobial drug resistance in the 2010 Haiti V. cholerae outbreak strain. Most resistance resulted from acquired genes located on an integrating conjugative element showing high homology to an integrating conjugative element identified in a V. cholerae isolate from India.
- Published
- 2011
- Full Text
- View/download PDF
50. Reading groups: a practical means of enhancing professional knowledge among human service practitioners.
- Author
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Parsons MB and Reid DH
- Abstract
Quality human service provision is heavily dependent on practitioners maintaining up-to-date professional knowledge. We evaluated a monthly reading group process as a practical means of enhancing professional knowledge among educators in a program for adults with severe disabilities. The reading group process was designed to minimize disruptions to participants' direct contact time with students and to promote participant acceptance of the process. The process followed a structured format involving study questions and systematic prompting to ensure active participation. Comparison of pre- and post-quiz responses to short-answer and multiple-choice questions showed consistent improvement in correct answers following each of four reading group meetings. Survey responses indicated all participants reported the process to be highly acceptable. Results are discussed regarding guidelines for behavior analysts interested in enhancing professional knowledge of other practitioners with whom they work, with a focus on obtaining administrative approval for reading group activities, structuring the activities to promote active participation, and using strategies to enhance participant acceptance.
- Published
- 2011
- Full Text
- View/download PDF
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