41 results on '"Parsons DR"'
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2. What factors influence the uptake of vaccinations amongst pregnant women following the Covid-19 pandemic: A qualitative study
- Author
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Parsons, Dr Jo, Grimley, Dr Cath, Atherton, Professor Helen, Clarke, Louise, Hillman, Dr Sarah, and Bick, Professor Debra
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- 2024
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3. Turbidity Currents Can Dictate Organic Carbon Fluxes Across River‐Fed Fjords: An Example From Bute Inlet (BC, Canada)
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Hage, S, Galy, VV, Cartigny, MJB, Heerema, C, Heijnen, MS, Acikalin, S, Clare, MA, Giesbrecht, I, Gröcke, DR, Hendry, A, Hilton, RG, Hubbard, SM, Hunt, JE, Lintern, DG, McGhee, C, Parsons, DR, Pope, EL, Stacey, CD, Sumner, EJ, Tank, S, and Talling, PJ
- Subjects
fjords ,Atmospheric Science ,sediment ,Ecology ,organic carbon ,Paleontology ,Soil Science ,Forestry ,carbon burial ,Aquatic Science ,rivers ,submarine channel ,Water Science and Technology - Abstract
The delivery and burial of terrestrial particulate organic carbon (OC) in marine sediments is important to quantify, because this OC is a food resource for benthic communities, and if buried it may lower the concentrations of atmospheric CO2 over geologic timescales. Analysis of sediment cores has previously shown that fjords are hotspots for OC burial. Fjords can contain complex networks of submarine channels formed by seafloor sediment flows, called turbidity currents. However, the burial efficiency and distribution of OC by turbidity currents in river-fed fjords had not been investigated previously. Here, we determine OC distribution and burial efficiency across a turbidity current system within Bute Inlet, a fjord in western Canada. We show that 62 ± 10 % of the OC supplied by the two river sources is buried across the fjord surficial (30 to 200 cm) sediment. The sandy sub-environments (channel and lobe) contain 63 ± 14 % of the annual terrestrial OC burial in the fjord. In contrast, the muddy sub-environments (overbank and distal basin) contain the remaining 37 ± 14 %. OC in the channel, lobe and overbank exclusively comprises terrestrial OC sourced from rivers. When normalized by the fjord’s surface area, at least three times more terrestrial OC is buried in Bute Inlet, compared to the muddy parts of other fjords previously studied. Although the long-term (>100 year) preservation of this OC is still to be fully understood, turbidity currents in fjords appear to be efficient at storing OC supplied by rivers in their near-surface deposits. Plain Language Summary Plants on land use CO2 from the atmosphere to produce organic carbon, which promotes their growth. Rivers transport organic carbon to the sea, where it is either eaten by fauna or buried in the seafloor, thus decreasing atmospheric CO2 levels on Earth over thousands to millions of years. Fjords are recognized as global organic carbon sinks; trapping 18 million tons of organic carbon in their seafloor sediments each year. However, the complex morphology of fjord seafloors was not considered in the calculation of this organic carbon flux. In this study we determine the distribution and abundance of terrestrial organic carbon across a fjord (Bute Inlet, Canada), which contains a submarine channel network terminating onto a large accumulation of sand (called a lobe). We show that 62 % of the organic carbon supplied by the two rivers connected to the fjord is buried across the fjord; the majority of this carbon being held in the lobe. In total, Bute Inlet buries at least three times more organic carbon per unit of surface area than other fjords previously studied. Submarine channels in fjords thus appear to promote the storage of land-derived organic carbon in the seafloor, potentially impacting CO2 levels and food resources for marine fauna. Key Points Bute Inlet, a river-fed fjord incised by turbidity currents, has a contemporary terrestrial organic carbon burial efficiency of 62 ± 10 % Sandy surficial deposits are responsible for 63 ± 14 % of the total terrestrial organic carbon burial budget in Bute Inlet, but only cover 17 % of the seafloor area Global estimates based only on the muddy parts of fjords may significantly underestimate organic carbon burial rates by a factor > 3
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- 2022
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4. The Coastline Evolution Model 2D (CEM2D) V1.1
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Leach, C, Coulthard, T, Barkwith, A, Parsons, DR, Manson, S, Leach, C, Coulthard, T, Barkwith, A, Parsons, DR, and Manson, S
- Abstract
Coasts are among the most intensely used environments on the planet, but they also present dynamic and unique hazards, including flooding and erosion. Sea level rise and changing wave climates will alter patterns of erosion and deposition, but some existing coastline evolution models are unable to simulate these effects due to their one-dimensional representation of the systems or the sediment transport processes. In this paper, the development and application of the Coastline Evolution Model 2D (CEM2D) are presented, a model which incorporates these influences. The model has been developed from the established CEM and is capable of simulating fundamental cause–effect relationships in coastal systems. The two-dimensional storage and transport of sediment in CEM2D, which are only done in one-dimension in CEM, mean it is also capable of exploring the influence of a variable water level on sediment transport and the formation and evolution of morphological features and landforms at the mesoscale. The model sits between one-dimensional and three-dimensional models, with the advantage of increased complexity and detail in model outputs compared to the former but with more efficiency and less computational expense than the latter.
- Published
- 2021
5. The Coastline Evolution Model 2D (CEM2D) V1.1
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Leach, C, Coulthard, T, Barkwith, A, Parsons, DR, Manson, S, Leach, C, Coulthard, T, Barkwith, A, Parsons, DR, and Manson, S
- Abstract
Coasts are among the most intensely used environments on the planet, but they also present dynamic and unique hazards including flooding and erosion. Sea level rise and changing wave climates will alter patterns of erosion and deposition, but some existing coastline evolution models are unable to simulate these effects due to their one-dimensional representation of the systems, or of sediment transport processes. In this paper, the development and application of the Coastline Evolution Model 2D (CEM2D) is presented, that incorporates these influences. The model has been developed from the established CEM model and is capable of simulating fundamental cause-effect relationships in coastal systems. The two-dimensional storage and transport of sediment in CEM2D, which is only done in one-dimension in CEM, means it is also capable of exploring the influence of a variable water level on sediment transport and the formation and evolution of morphological features and landforms at the meso-scale, from 10 to 100 years and over 10 to 100 kilometres. The model sits between one-dimensional and three-dimensional models, with the advantage of increased complexity and detail in model outputs compared to the former, but with more efficiency and less computational expense than the latter.
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- 2019
6. Foreword
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Parsons, Dr. Simon
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- 2024
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7. Child's play: a quirky view of the special relationship; A touching tale of two friends linked by their love of toy guns and soldiers
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Parsons, Dr
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Political leadership -- Humor and anecdotes -- Excerpts ,Literature/writing ,Political science ,Humor and anecdotes - Abstract
Georg Bush is, in his own words, 'presidant of americer'. He has 'the most guns, playns, boms an soljers in the wurld'. He has a wife and a dad (who [...]
- Published
- 2002
8. Editorial
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F. Parsons, Dr Susan, primary
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- 2009
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9. Carbon dioxide emissions by rock organic carbon oxidation and the net geochemical carbon budget of the Mackenzie River Basin
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Horan, K, Hilton, RG, Dellinger, M, Tipper, E, Galy, V, Calmels, D, Selby, D, Gaillardet, J, Ottley, CJ, Parsons, DR, and Burton, KW
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erosion and weathering ,13. Climate action ,carbon cycle ,petrogenic organic carbon ,rhenium ,Mackenzie River - Abstract
© 2019 American Journal of Science. All rights reserved. The exposure of organic carbon in rocks to oxidative weathering can release carbon dioxide (CO2) to the atmosphere and consume atmospheric oxygen. Alongside volcanism, metamorphism, and the weathering of carbonate minerals by sulfuric acid, this is a major source of atmospheric CO2 over million year timescales. The balance between CO2 release and CO2 drawdown by silicate weathering and organic carbon burial sets the net geochemical carbon budget during weathering and erosion. However, the rates of rock-derived organic carbon (petrogenic organic carbon, OCpetro) oxidation remain poorly constrained. Here, we use rhenium as a proxy to trace and quantify CO2 release by OCpetro oxidation in the Mackenzie River Basin, Canada, where the other carbon fluxes have been well constrained previously. River water and sediment samples were collected between 2009 and 2013 at gauging stations along the Mackenzie River and its main tributaries (Liard, Peel and Arctic Red). To assess rhenium inputs from silicate, sulfide and OCpetro mineral phases we normalize dissolved rhenium concentrations, [Re]diss, to sodium and sulfate ion concentrations. This approach suggests that >85 percent of Re]diss is derived from OC tro in the main river channels. [Re]diss and water discharge measurements are used to quantify dissolved Re yields. River sediments provide a measure of the Re to OC tro ratio of materials undergoing weathering in the basin, and agree well with published rock samples. Dissolved Re yields are combined with river sediment [Re]/[OCpetro] ratios to estimate the CO2 emissions by OCpetro weathering. These are 0.45+019/-0.11 metric tonnes of carbon, tC km2 yr-1 for the Mackenzie River at Tsiigehtchic (3.8+1.5/0.9 × 104 moles km-2 yr-1), and 0.94+0.41/-0.26 tC km-2yr-1, 0.78+0.35/-0.21tC km-2 yr-1 and 1.01+0.42./-0.25tC km-2 yr-1 for the Peel, Arctic Red and Liard catchments, respectively. When considered alongside published silicate and carbonate weathering rates and the sedimentary burial of biospheric organic carbon, these data suggest that the upper part of the Mackenzie River Basin presently acts as an atmospheric CO2 sink of ∼1 tC km-2 yr-1 (∼8 × 104 moles km-2 yr-1) as a result of the carbon transfers by weathering and erosion. During the Last Glacial Maximum, it is possible that the net geochemical carbon balance may have been very different: potential increases in CO2 emissions from oxidative weathering of OCpetro and carbonate minerals, coupled with reduced biospheric carbon burial, may have tipped the balance to a net source of CO2
10. Integrating suspended sediment flux in large alluvial river channels: Application of a synoptic Rouse-based model to the Irrawaddy and Salween rivers
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Emily I. Stevenson, Aung Myo Khaing, Christopher Hackney, Edward T. Tipper, Daniel R. Parsons, J. Jotautas Baronas, Mike J. Bickle, Christina S. Larkin, Stephen E. Darby, Robert G. Hilton, Baronas, JJ [0000-0002-4027-3965], Hackney, CR [0000-0001-5390-9136], Darby, SE [0000-0001-8778-4394], Bickle, MJ [0000-0001-8889-3410], Larkin, CS [0000-0002-6420-0461], Parsons, DR [0000-0002-5142-4466], Tipper, ET [0000-0003-3540-3558], and Apollo - University of Cambridge Repository
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bepress|Physical Sciences and Mathematics ,bepress|Physical Sciences and Mathematics|Earth Sciences|Sedimentology ,010504 meteorology & atmospheric sciences ,sub-01 ,Sorting (sediment) ,bepress|Physical Sciences and Mathematics|Earth Sciences|Geomorphology ,bepress|Physical Sciences and Mathematics|Earth Sciences ,EarthArXiv|Physical Sciences and Mathematics|Earth Sciences ,01 natural sciences ,Flux (metallurgy) ,EarthArXiv|Physical Sciences and Mathematics|Earth Sciences|Geomorphology ,bepress|Physical Sciences and Mathematics|Earth Sciences|Hydrology ,EarthArXiv|Physical Sciences and Mathematics|Earth Sciences|Sedimentology ,0105 earth and related environmental sciences ,Earth-Surface Processes ,Total organic carbon ,Hydrology ,geography ,Particulate organic carbon ,3707 Hydrology ,geography.geographical_feature_category ,EarthArXiv|Physical Sciences and Mathematics|Earth Sciences|Geology ,bepress|Physical Sciences and Mathematics|Earth Sciences|Geology ,Sediment ,37 Earth Sciences ,Alluvial river ,EarthArXiv|Physical Sciences and Mathematics|Earth Sciences|Geochemistry ,3709 Physical Geography and Environmental Geoscience ,EarthArXiv|Physical Sciences and Mathematics ,Geophysics ,Environmental science ,bepress|Physical Sciences and Mathematics|Earth Sciences|Geochemistry ,EarthArXiv|Physical Sciences and Mathematics|Earth Sciences|Hydrology ,Sediment transport ,Channel (geography) - Abstract
A large portion of freshwater and sediment is exported to the ocean by a small number of major rivers. Many of these megarivers are subject to substantial anthropogenic pressures, which are having a major impact on water and sediment delivery to deltaic ecosystems. Due to hydrodynamic sorting, sediment grain size and composition vary strongly with depth and across the channel in large rivers, complicating flux quantification. To account for this, we modified a semi‐empirical Rouse model, synoptically predicting sediment concentration, grain‐size distribution, and organic carbon (%OC) concentration with depth and across the river channel. Using suspended sediment depth samples and flow velocity data, we applied this model to calculate sediment fluxes of the Irrawaddy (Ayeyarwady) and the Salween (Thanlwin), the last two free‐flowing megarivers in Southeast Asia. Deriving sediment‐discharge rating curves, we calculated an annual sediment flux of urn:x-wiley:jgrf:media:jgrf21236:jgrf21236-math-0001 Mt/year for the Irrawaddy and urn:x-wiley:jgrf:media:jgrf21236:jgrf21236-math-0002 Mt/year for the Salween, together exporting 46% as much sediment as the Ganges‐Brahmaputra system. The mean flux‐weighted sediment exported by the Irrawaddy is significantly coarser (D84 = 193 ± 13 μm) and OC‐poorer (0.29 ± 0.08 wt%) compared to the Salween (112 ± 27 μm and 0.59 ± 0.16 wt%, respectively). Both rivers export similar amounts of particulate organic carbon, with a total of urn:x-wiley:jgrf:media:jgrf21236:jgrf21236-math-0003 Mt C/year, 53% as much as the Ganges‐Brahmaputra. These results underline the global significance of the Irrawaddy and Salween rivers and warrant continued monitoring of their sediment flux, given the increasing anthropogenic pressures on these river basins.
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- 2020
11. The transport and vertical distribution of microplastics in the Mekong River, SE Asia.
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Mendrik F, Hackney CR, Cumming VM, Waller C, Hak D, Dorrell R, Hung NN, and Parsons DR
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Rivers are primary vectors of plastic debris to oceans, but sources, transport mechanisms, and fate of fluvial microplastics (<5 mm) remain poorly understood, impeding accurate predictions of microplastic flux, ecological risk and socio-economic impacts. We report on microplastic concentrations, characteristics and dynamics in the Mekong River, one of the world's largest and polluting rivers, in Cambodia and Vietnam. Sampling throughout the water column at multiple localities detected an average of 24 microplastics m
-3 (0.073 mg l-1 ). Concentrations increased downstream from rural Kampi, Cambodia (344 km from river mouth; 2 microplastics m-3, 0.006 mg l-1 ), to Can Tho, Vietnam (83 km from river mouth; 64 microplastics m-3 , 0.182 mg l-1 ) with most microplastics being fibres (53 %), followed by fragments (44 %) and the most common polymer being polyethylene terephthalate (PET) or polyester. Pathways of microplastic pollution are expected to be from urban wastewater highlighting the need for improved wastewater treatment in this region. On average, 86 % of microplastics are transported within the water column and consequently we identified an optimum sampling depth capturing a representative flux value, highlighting that sampling only the water surface substantially biases microplastic concentration predictions. Additionally, microplastic abundance does not linearly follow discharge changes during annual monsoonal floods or mirror siliciclastic sediment transport, as microplastic concentrations decrease rapidly during higher monsoon flows. The findings reveal complex microplastic transport in large rivers and call for improved sampling methods and predictive models to better assess environmental risk and guide policy., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2024
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12. Microplastic trapping efficiency and hydrodynamics in model coral reefs: A physical experimental investigation.
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Mendrik F, Houseago RC, Hackney CR, and Parsons DR
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- Animals, Microplastics, Ecosystem, Plastics, Hydrodynamics, Coral Reefs, Anthozoa
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Coastal ecosystems, such as coral reefs, are vulnerable to microplastic pollution input from proximal riverine and shoreline sources. However, deposition, retention, and transport processes are largely unevaluated, especially in relation to hydrodynamics. For the first time, we experimentally investigate the retention of biofilmed microplastic by branching 3D printed corals (staghorn coral Acropora genus) under various unidirectional flows (U = {0.15, 0.20, 0.25, 0.30} ms
-1 ) and canopy densities (15 and 48 corals m-2 ). These variables are found to drive trapping efficiency, with 79-98% of microplastics retained in coral canopies across the experimental duration at high flow velocities (U = 0.25-0.30 ms-1 ), compared to 10-13% for the bare bed, with denser canopies retaining only 15% more microplastics than the sparse canopy at highest flow conditions (U = 0.30 ms-1 ). Three fundamental trapping mechanisms were identified: (a) particle interception, (b) settlement on branches or within coral, and (c) accumulation in the downstream wake region of the coral. Corresponding hydrodynamics reveal that microplastic retention and spatial distribution is modulated by the energy-dissipative effects of corals due to flow-structure interactions reducing in-canopy velocities and generating localised turbulence. The wider ecological implications for coral systems are discussed in light of the findings, particularly in terms of concentrations and locations of plastic accumulation., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Authors. Published by Elsevier Ltd.. All rights reserved.)- Published
- 2024
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13. A high-resolution daily global dataset of statistically downscaled CMIP6 models for climate impact analyses.
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Gebrechorkos S, Leyland J, Slater L, Wortmann M, Ashworth PJ, Bennett GL, Boothroyd R, Cloke H, Delorme P, Griffith H, Hardy R, Hawker L, McLelland S, Neal J, Nicholas A, Tatem AJ, Vahidi E, Parsons DR, and Darby SE
- Abstract
A large number of historical simulations and future climate projections are available from Global Climate Models, but these are typically of coarse resolution, which limits their effectiveness for assessing local scale changes in climate and attendant impacts. Here, we use a novel statistical downscaling model capable of replicating extreme events, the Bias Correction Constructed Analogues with Quantile mapping reordering (BCCAQ), to downscale daily precipitation, air-temperature, maximum and minimum temperature, wind speed, air pressure, and relative humidity from 18 GCMs from the Coupled Model Intercomparison Project Phase 6 (CMIP6). BCCAQ is calibrated using high-resolution reference datasets and showed a good performance in removing bias from GCMs and reproducing extreme events. The globally downscaled data are available at the Centre for Environmental Data Analysis ( https://doi.org/10.5285/c107618f1db34801bb88a1e927b82317 ) for the historical (1981-2014) and future (2015-2100) periods at 0.25° resolution and at daily time step across three Shared Socioeconomic Pathways (SSP2-4.5, SSP5-3.4-OS and SSP5-8.5). This new climate dataset will be useful for assessing future changes and variability in climate and for driving high-resolution impact assessment models., (© 2023. Springer Nature Limited.)
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- 2023
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14. Inadequacy of fluvial energetics for describing gravity current autosuspension.
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Fukuda S, de Vet MGW, Skevington EWG, Bastianon E, Fernández R, Wu X, McCaffrey WD, Naruse H, Parsons DR, and Dorrell RM
- Abstract
Gravity currents, such as sediment-laden turbidity currents, are ubiquitous natural flows that are driven by a density difference. Turbidity currents have provided vital motivation to advance understanding of this class of flows because their enigmatic long run-out and driving mechanisms are not properly understood. Extant models assume that material transport by gravity currents is dynamically similar to fluvial flows. Here, empirical research from different types of particle-driven gravity currents is integrated with our experimental data, to show that material transport is fundamentally different from fluvial systems. Contrary to current theory, buoyancy production is shown to have a non-linear dependence on available flow power, indicating an underestimation of the total kinetic energy lost from the mean flow. A revised energy budget directly implies that the mixing efficiency of gravity currents is enhanced., (© 2023. The Author(s).)
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- 2023
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15. Plastic pollution in riverbeds fundamentally affects natural sand transport processes.
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Russell CE, Fernández R, Parsons DR, and Gabbott SE
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Over the past 50 years, rivers have become increasingly important vectors for plastic pollution. Lowland riverbeds exhibit coherent morphological features including ripple and dune bedforms, which transport sediment downstream via well-understood processes, yet the impact of plastic on sediment transport mechanics is largely unknown. Here we use flume tank experiments to show that when plastic particles are introduced to sandy riverbeds, even at relatively low concentrations, novel bedform morphologies and altered processes emerge, including irregular bedform stoss erosion and dune "washout", causing topographic bedform amplitudes to decline. We detail (i) new mechanisms of plastic incorporation and transport in riverbed dunes, and (ii) how sedimentary processes are fundamentally influenced. Our laboratory flume tank experiments suggest that plastic is not a passive component of river systems but directly affects bed topography and locally increases the proportion of sand suspended in the water column, which at larger scales, has the potential to impact river ecosystems and wider landscapes. The resulting plastic distribution in the sediment is heterogeneous, highlighting the challenge of representatively sampling plastic concentrations in river sediments. Our insights are part of an ongoing suite of efforts contributing to the establishment of a new branch of process sedimentology: plastic - riverbed sand interactions., Competing Interests: Competing interestsThe authors declare no competing interests., (© Crown 2023.)
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- 2023
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16. Discontinuity in Equilibrium Wave-Current Ripple Size and Shape and Deep Cleaning Associated With Cohesive Sand-Clay Beds.
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Wu X, Fernandez R, Baas JH, Malarkey J, and Parsons DR
- Abstract
Mixtures of cohesive clay and noncohesive sand are widespread in many aquatic environments. Ripple dynamics in sand-clay mixtures have been studied under current-alone and wave-alone conditions but not combined wave-current conditions, despite their prevalence in estuaries and the coastal zone. The present flume experiments examine the effect of initial clay content, C
0 , on ripples by considering a single wave-current condition and, for the first time, quantify how changing clay content of substrate impacts ripple dimensions during development. The results show inverse relationships between C0 and ripple growth rates and clay winnowing transport rates out of the bed, which reduce as the ripples develop toward equilibrium. For C0 ≤ 10.6%, higher winnowing rates lead to clay loss, and thus the presence of clean sand, far below the base of equilibrium ripples. This hitherto unquantified "deep-cleaning" of clay does not occur for C0 > 10.6%, where clay-loss rates are much lower. The clay-loss behavior is associated with two distinct types of equilibrium combined flow ripples: (a) Large asymmetric ripples with dimensions and plan geometries comparable to their clean-sand counterparts for C0 ≤ 10.6% and (b) small, flat ripples for C0 > 10.6%. The 10.6% threshold, which may be specific to the experimental conditions, corresponds to a more general 8% threshold found beneath the ripple base, suggesting that clay content here must be <8% for clean-sand-like ripples to develop in sand-clay beds. This ripple-type discontinuity comprises a threefold reduction in ripple height, with notable implications for bed roughness., Competing Interests: The authors declare no conflicts of interest relevant to this study., (© 2022. The Authors.)- Published
- 2022
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17. Longest sediment flows yet measured show how major rivers connect efficiently to deep sea.
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Talling PJ, Baker ML, Pope EL, Ruffell SC, Jacinto RS, Heijnen MS, Hage S, Simmons SM, Hasenhündl M, Heerema CJ, McGhee C, Apprioual R, Ferrant A, Cartigny MJB, Parsons DR, Clare MA, Tshimanga RM, Trigg MA, Cula CA, Faria R, Gaillot A, Bola G, Wallance D, Griffiths A, Nunny R, Urlaub M, Peirce C, Burnett R, Neasham J, and Hilton RJ
- Subjects
- Carbon, Environmental Monitoring, Floods, Seasons, Geologic Sediments, Rivers
- Abstract
Here we show how major rivers can efficiently connect to the deep-sea, by analysing the longest runout sediment flows (of any type) yet measured in action on Earth. These seafloor turbidity currents originated from the Congo River-mouth, with one flow travelling >1,130 km whilst accelerating from 5.2 to 8.0 m/s. In one year, these turbidity currents eroded 1,338-2,675 [>535-1,070] Mt of sediment from one submarine canyon, equivalent to 19-37 [>7-15] % of annual suspended sediment flux from present-day rivers. It was known earthquakes trigger canyon-flushing flows. We show river-floods also generate canyon-flushing flows, primed by rapid sediment-accumulation at the river-mouth, and sometimes triggered by spring tides weeks to months post-flood. It is demonstrated that strongly erosional turbidity currents self-accelerate, thereby travelling much further, validating a long-proposed theory. These observations explain highly-efficient organic carbon transfer, and have important implications for hazards to seabed cables, or deep-sea impacts of terrestrial climate change., (© 2022. The Author(s).)
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- 2022
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18. Amplification of downstream flood stage due to damming of fine-grained rivers.
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Ma H, Nittrouer JA, Fu X, Parker G, Zhang Y, Wang Y, Wang Y, Lamb MP, Cisneros J, Best J, Parsons DR, and Wu B
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- China, Rivers, Floods, Geologic Sediments
- Abstract
River dams provide many benefits, including flood control. However, due to constantly evolving channel morphology, downstream conveyance of floodwaters following dam closure is difficult to predict. Here, we test the hypothesis that the incised, enlarged channel downstream of dams provides enhanced water conveyance, using a case study from the lower Yellow River, China. We find that, although flood stage is lowered for small floods, counterintuitively, flood stage downstream of a dam can be amplified for moderate and large floods. This arises because bed incision is accompanied by sediment coarsening, which facilitates development of large dunes that increase flow resistance and reduce velocity relative to pre-dam conditions. Our findings indicate the underlying mechanism for such flood amplification may occur in >80% of fine-grained rivers, and suggest the need to reconsider flood control strategies in such rivers worldwide., (© 2022. The Author(s).)
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- 2022
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19. First source-to-sink monitoring shows dense head controls sediment flux and runout in turbidity currents.
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Pope EL, Cartigny MJB, Clare MA, Talling PJ, Lintern DG, Vellinga A, Hage S, Açikalin S, Bailey L, Chapplow N, Chen Y, Eggenhuisen JT, Hendry A, Heerema CJ, Heijnen MS, Hubbard SM, Hunt JE, McGhee C, Parsons DR, Simmons SM, Stacey CD, and Vendettuoli D
- Abstract
Until recently, despite being one of the most important sediment transport phenomena on Earth, few direct measurements of turbidity currents existed. Consequently, their structure and evolution were poorly understood, particularly whether they are dense or dilute. Here, we analyze the largest number of turbidity currents monitored to date from source to sink. We show sediment transport and internal flow characteristic evolution as they runout. Observed frontal regions (heads) are fast (>1.5 m/s), thin (<10 m), dense (depth averaged concentrations up to 38%
vol ), strongly stratified, and dominated by grain-to-grain interactions, or slower (<1 m/s), dilute (<0.01%vol ), and well mixed with turbulence supporting sediment. Between these end-members, a transitional flow head exists. Flow bodies are typically thick, slow, dilute, and well mixed. Flows with dense heads stretch and bulk up with dense heads transporting up to 1000 times more sediment than the dilute body. Dense heads can therefore control turbidity current sediment transport and runout into the deep sea.- Published
- 2022
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20. Comparative assessment of marine weathering of ROP-derived biopolymers against conventional plastics.
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Rodgers K, Mayes WM, Santoro O, Redshaw C, Mccumskay R, and Parsons DR
- Subjects
- Biopolymers, Polymerization, Seawater, Plastics, Polymers
- Abstract
Bio-based plastics were designed to replace single-use plastics and to cause less post-consumer environmental damage. This paper assesses the weathering of four bio-based polymers created by ring opening polymerization (ROP) promoted by a previously reported Ti-based catalyst, to detect any problems before production was scaled up. Samples were aged in seawater to identify degradation products and monitor structural changes. Surfaces evidenced degradation and a range of leaching products was observed. Aside from compounds used in the preparation of the plastics (i.e. residual monomers and benzyl alcohol), the degradation products included carboxylic acids (often found in plastic leachate), oxacyclohexadecan-2-one (potentially toxic to aquatic life) and triphenylmethane (potential carcinogen). Overall, there were fewer structural changes in the fossil fuel based polymer (PS) and in the commercially available bio-based plastic studied for comparison purposes than the lab based bio-based polymers., (Copyright © 2021 Elsevier Ltd. All rights reserved.)
- Published
- 2021
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21. Evaluating how lethal management affects poaching of Mexican wolves.
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Louchouarn NX, Santiago-Ávila FJ, Parsons DR, and Treves A
- Abstract
Despite illegal killing (poaching) being the major cause of death among large carnivores globally, little is known about the effect of implementing lethal management policies on poaching. Two opposing hypotheses have been proposed in the literature: implementing lethal management may decrease poaching incidence (killing for tolerance) or increase it (facilitated illegal killing). Here, we report a test of the two opposed hypotheses that poaching (reported and unreported) of Mexican grey wolves ( Canis lupus baileyi ) in Arizona and New Mexico, USA, responded to changes in policy that reduced protections to allow more wolf-killing. We employ advanced biostatistical survival and competing risk methods to data on individual resightings, mortality and disappearances of collared Mexican wolves, supplemented with Bayes factors to assess the strength of evidence. We find inconclusive evidence for any decreases in reported poaching. We also find strong evidence that Mexican wolves were 121% more likely to disappear during periods of reduced protections than during periods of stricter protections, with only slight changes in legal removals by the agency. Therefore, we find strong support for the 'facilitated illegal killing' hypothesis and none for the 'killing for tolerance' hypothesis. We provide recommendations for improving the effectiveness of US policy on environmental crimes, endangered species and protections for wild animals. Our results have implications beyond the USA or wolves because the results suggest transformations of decades-old management interventions against human-caused mortality among wild animals subject to high rates of poaching., (© 2021 The Authors.)
- Published
- 2021
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22. Impact of dams and climate change on suspended sediment flux to the Mekong delta.
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Bussi G, Darby SE, Whitehead PG, Jin L, Dadson SJ, Voepel HE, Vasilopoulos G, Hackney CR, Hutton C, Berchoux T, Parsons DR, and Nicholas A
- Abstract
The livelihoods of millions of people living in the world's deltas are deeply interconnected with the sediment dynamics of these deltas. In particular a sustainable supply of fluvial sediments from upstream is critical for ensuring the fertility of delta soils and for promoting sediment deposition that can offset rising sea levels. Yet, in many large river catchments this supply of sediment is being threatened by the planned construction of large dams. In this study, we apply the INCA hydrological and sediment model to the Mekong River catchment in South East Asia. The aim is to assess the impact of several large dams (both existing and planned) on the suspended sediment fluxes of the river. We force the INCA model with a climate model to assess the interplay of changing climate and sediment trapping caused by dam construction. The results show that historical sediment flux declines are mostly caused by dams built in PR China and that sediment trapping will increase in the future due to the construction of new dams in PDR Lao and Cambodia. If all dams that are currently planned for the next two decades are built, they will induce a decline of suspended sediment flux of 50% (47-53% 90% confidence interval (90%CI)) compared to current levels (99 Mt/year at the delta apex), with potentially damaging consequences for local livelihoods and ecosystems., Competing Interests: Declaration of competing interest We as authors have no conflicts of interest with the publication of this paper., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2021
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23. Species-specific impact of microplastics on coral physiology.
- Author
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Mendrik FM, Henry TB, Burdett H, Hackney CR, Waller C, Parsons DR, and Hennige SJ
- Subjects
- Animals, Coral Reefs, Microplastics, Photosynthesis, Plastics, Anthozoa
- Abstract
There is evidence that microplastic (MP) pollution can negatively influence coral health; however, mechanisms are unknown and most studies have used MP exposure concentrations that are considerably higher than current environmental conditions. Furthermore, whether MP exposure influences coral susceptibility to other stressors such as ocean warming is unknown. Our objective was to determine the physiology response of corals exposed to MP concentrations that have been observed in-situ at ambient and elevated temperature that replicates ocean warming. Here, two sets of short-term experiments were conducted at ambient and elevated temperature, exposing the corals Acroporasp. and Seriatopora hystrix to microspheres and microfibres. Throughout the experiments, gross photosynthesis and net respiration was quantified using a 4-chamber coral respirometer, and photosynthetic yields of photosystem II were measured using Pulse-Amplitude Modulated (PAM) fluorometry. Results indicate the effect of MP exposure is dependent on MP type, coral species, and temperature. MP fibres (but not spheres) reduced photosynthetic capability of Acropora sp., with a 41% decrease in photochemical efficiency at ambient temperature over 12 days. No additional stress response was observed at elevated temperature; photosynthetic performance significantly increased in Seriatopora hystrix exposed to MP spheres. These findings show that a disruption to coral photosynthetic ability can occur at MP concentrations that have been observed in the marine environment and that MP pollution impact on corals remains an important aspect for further research., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)
- Published
- 2021
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24. Impact of Increasing Comorbidity Burden on Resource Utilization in Patients With Proximal Humerus Fractures.
- Author
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London DA, Cagle PJ, Parsons BO, Galatz LM, Anthony SG, Zubizarreta N, Mazumdar M, and Poeran J
- Subjects
- Aged, Arthroplasty, Replacement, Shoulder economics, Cohort Studies, Comorbidity, Conservative Treatment economics, Costs and Cost Analysis, Female, Fracture Fixation, Internal economics, Hemiarthroplasty economics, Hospitalization economics, Humans, Male, Open Fracture Reduction economics, Shoulder Fractures epidemiology, Cost of Illness, Drug Utilization economics, Drug Utilization statistics & numerical data, Patient Acceptance of Health Care statistics & numerical data, Shoulder Fractures economics, Shoulder Fractures surgery
- Abstract
Introduction: Proximal humerus fractures (PHF) are a common upper extremity fracture in the elderly cohort. An aging and more comorbid cohort, along with recent trends of increased operative intervention, suggests that there could be an increase in resource utilization caring for these patients. We sought to quantify these trends and quantify the impact that comorbidity burden has on resource utilization., Methods: Data on 83,975 patients with PHFs were included from the Premier Healthcare Claims database (2006 to 2016) and stratified by Deyo-Charlson index. Multivariable models assessed associations between Deyo-Charlson comorbidities and resource utilization (length and cost of hospitalization, and opioid utilization in oral morphine equivalents [OME]) for five treatment modalities: (1) open reduction internal fixation (ORIF), (2) closed reduction internal fixation (CRIF), (3) hemiarthroplasty, (4) reverse total shoulder arthroplasty, and (5) nonsurgical treatment (NST). We report a percentage change in resource utilization associated with an increasing comorbidity burden., Results: Overall distribution of treatment modalities was (proportion in percent/median length of stay/cost/opioid utilization): ORIF (19.1%/2 days/$11,183/210 OME), CRIF (1.1%/4 days/$11,139/220 OME), hemiarthroplasty (10.7%/3 days/$17,255/275 OME), reverse total shoulder arthroplasty (6.4%/3 days/$21,486/230 OME), and NST (62.7%/0 days/$1,269/30 OME). Patients with an increased comorbidity burden showed a pattern of (1) more pronounced relative increases in length of stay among those treated operatively (65.0% for patients with a Deyo-Charlson index >2), whereas (2) increases in cost of hospitalization (60.1%) and opioid utilization (37.0%) were more pronounced in the NST group., Discussion: In patients with PHFs, increased comorbidity burden coincides with substantial increases in resource utilization in patients receiving surgical and NSTs. Combined with known increases in operative intervention, trends in increased comorbidity burden may have profound effects on the cohort level and resource utilization for those with PHFs, especially because the use of bundled payment strategies for fractures increases., Level of Evidence: Level III.
- Published
- 2020
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25. Author Correction: Rapidly-migrating and internally-generated knickpoints can control submarine channel evolution.
- Author
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Heijnen MS, Clare MA, Cartigny MJB, Talling PJ, Hage S, Lintern DG, Stacey C, Parsons DR, Simmons SM, Chen Y, Sumner EJ, Dix JK, and Clarke JEH
- Abstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
- Published
- 2020
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26. Influence of light and temperature cycles on the expression of circadian clock genes in the mussel Mytilus edulis.
- Author
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Chapman EC, Bonsor BJ, Parsons DR, and Rotchell JM
- Subjects
- Animals, Circadian Rhythm, Light, Photoperiod, Temperature, Circadian Clocks, Mytilus edulis genetics
- Abstract
Clock genes and environmental cues regulate essential biological rhythms. The blue mussel, Mytilus edulis, is an ecologically and economically important intertidal bivalve undergoing seasonal reproductive rhythms. We previously identified seasonal expression differences in M. edulis clock genes. Herein, the effects of light/dark cycles, constant darkness, and daily temperature cycles on the circadian expression patterns of such genes are characterised. Clock genes Clk, Cry1, ROR/HR3, Per and Rev-erb/NR1D1, and Timeout-like, show significant mRNA expression variation, persisting in darkness indicating endogenous control. Rhythmic expression was apparent under diurnal temperature cycles in darkness for all except Rev-erb. Temperature cycles induced a significant expression difference in the non-circadian clock-associated gene aaNAT. Furthermore, Suppression Subtractive Hybridisation (SSH) was used to identify seasonal genes with potential links to molecular clock function and revealed numerous genes meriting further investigation. Understanding the relationship between environmental cues and molecular clocks is crucial in predicting the outcomes of environmental change on fundamental rhythmic processes., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)
- Published
- 2020
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27. Rapidly-migrating and internally-generated knickpoints can control submarine channel evolution.
- Author
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Heijnen MS, Clare MA, Cartigny MJB, Talling PJ, Hage S, Lintern DG, Stacey C, Parsons DR, Simmons SM, Chen Y, Sumner EJ, Dix JK, and Hughes Clarke JE
- Abstract
Submarine channels are the primary conduits for terrestrial sediment, organic carbon, and pollutant transport to the deep sea. Submarine channels are far more difficult to monitor than rivers, and thus less well understood. Here we present 9 years of time-lapse mapping of an active submarine channel along its full length in Bute Inlet, Canada. Past studies suggested that meander-bend migration, levee-deposition, or migration of (supercritical-flow) bedforms controls the evolution of submarine channels. We show for the first time how rapid (100-450 m/year) upstream migration of 5-to-30 m high knickpoints can control submarine channel evolution. Knickpoint migration-related changes include deep (>25 m) erosion, and lateral migration of the channel. Knickpoints in rivers are created by external factors, such as tectonics, or base-level change. However, the knickpoints in Bute Inlet appear internally generated. Similar knickpoints are found in several submarine channels worldwide, and are thus globally important for how channels operate.
- Published
- 2020
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28. A bedform phase diagram for dense granular currents.
- Author
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Smith G, Rowley P, Williams R, Giordano G, Trolese M, Silleni A, Parsons DR, and Capon S
- Abstract
Pyroclastic density currents (PDCs) are a life-threatening volcanic hazard. Our understanding and hazard assessments of these flows rely on interpretations of their deposits. The occurrence of stratified layers, cross-stratification, and bedforms in these deposits has been assumed as indicative of dilute, turbulent, supercritical flows causing traction-dominated deposition. Here we show, through analogue experiments, that a variety of bedforms can be produced by denser, aerated, granular currents, including backset bedforms that are formed in waning flows by an upstream-propagating granular bore. We are able to, for the first time, define phase fields for the formation of bedforms in PDC deposits. We examine how our findings impact the understanding of bedform features in outcrop, using the example of the Pozzolane Rosse ignimbrite of the Colli Albani volcano, Italy, and thus highlight that interpretations of the formative mechanisms of these features observed in the field must be reconsidered.
- Published
- 2020
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29. Integrating field and laboratory approaches for ripple development in mixed sand-clay-EPS.
- Author
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Baas JH, Baker ML, Malarkey J, Bass SJ, Manning AJ, Hope JA, Peakall J, Lichtman ID, Ye L, Davies AG, Parsons DR, Paterson DM, and Thorne PD
- Abstract
The shape and size of sedimentary bedforms play a key role in the reconstruction of sedimentary processes in modern and ancient environments. Recent laboratory experiments have shown that bedforms in mixed sand-clay develop at a slower rate and often have smaller heights and wavelengths than equivalent bedforms in pure sand. This effect is generally attributed to cohesive forces that can be of physical origin, caused by electrostatic forces of attraction between clay minerals, and of biological origin, caused by 'sticky' extracellular polymeric substances (EPS) produced by micro-organisms, such as microalgae (microphytobenthos) and bacteria. The present study demonstrates, for the first time, that these laboratory experiments are a suitable analogue for current ripples formed by tidal currents on a natural mixed sand-mud-EPS intertidal flat in a macrotidal estuary. Integrated hydrodynamic and bed morphological measurements, collected during a spring tide under weak wave conditions near Hilbre Island (Dee Estuary, north-west England, UK), reveal a statistically significant decrease in current ripple wavelength for progressively higher bed mud and EPS contents, and a concurrent change from three-dimensional linguoid to two-dimensional straight-crested ripple planform morphology. These results agree well with observations in laboratory flumes, but the rate of decrease of ripple wavelength as mud content increased was found to be substantially greater for the field than the laboratory. Since the formation of ripples under natural conditions is inherently more complex than in the laboratory, four additional factors that might affect current ripple development in estuaries, but which were not accounted for in laboratory experiments, were explored. These were current forcing, clay type, pore water salinity and bed EPS content. These data illustrate that clay type alone cannot explain the difference in the rate of decrease in ripple wavelength, because the bed clay contents were too low for clay type to have had a measurable effect on bedform development. Accounting for the difference in current forcing between the field and experiments, and therefore the relative stage of development with respect to equilibrium ripples, increases the difference between the ripple wavelengths. The presence of strongly cohesive EPS in the current ripples on the natural intertidal flat might explain the majority of the difference in the rate of decrease in ripple wavelength between the field and the laboratory. The effect of pore water salinity on the rate of bedform development cannot be quantified at present, but salinity is postulated herein to have had a smaller influence on the ripple wavelength than bed EPS content. The common presence of clay and EPS in many aqueous sedimentary environments implies that a re-assessment of the role of current ripples and their primary current lamination in predicting and reconstructing flow regimes is necessary, and that models that are valid for pure sand are an inappropriate descriptor for more complex mixed sediment. This study proposes that this re-assessment is necessary at all bed clay contents above 3%., (© 2019 The Authors. Sedimentology published by John Wiley © Sons Ltd on behalf of International Association of Sedimentologists.)
- Published
- 2019
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30. Direct Monitoring Reveals Initiation of Turbidity Currents From Extremely Dilute River Plumes.
- Author
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Hage S, Cartigny MJB, Sumner EJ, Clare MA, Hughes Clarke JE, Talling PJ, Lintern DG, Simmons SM, Silva Jacinto R, Vellinga AJ, Allin JR, Azpiroz-Zabala M, Gales JA, Hizzett JL, Hunt JE, Mozzato A, Parsons DR, Pope EL, Stacey CD, Symons WO, Vardy ME, and Watts C
- Abstract
Rivers (on land) and turbidity currents (in the ocean) are the most important sediment transport processes on Earth. Yet how rivers generate turbidity currents as they enter the coastal ocean remains poorly understood. The current paradigm, based on laboratory experiments, is that turbidity currents are triggered when river plumes exceed a threshold sediment concentration of ~1 kg/m
3 . Here we present direct observations of an exceptionally dilute river plume, with sediment concentrations 1 order of magnitude below this threshold (0.07 kg/m3 ), which generated a fast (1.5 m/s), erosive, short-lived (6 min) turbidity current. However, no turbidity current occurred during subsequent river plumes. We infer that turbidity currents are generated when fine sediment, accumulating in a tidal turbidity maximum, is released during spring tide. This means that very dilute river plumes can generate turbidity currents more frequently and in a wider range of locations than previously thought., (©2019. The Authors.)- Published
- 2019
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31. Self-sharpening induces jet-like structure in seafloor gravity currents.
- Author
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Dorrell RM, Peakall J, Darby SE, Parsons DR, Johnson J, Sumner EJ, Wynn RB, Özsoy E, and Tezcan D
- Abstract
Gravity currents are the primary means by which sediments, solutes and heat are transported across the ocean-floor. Existing theory of gravity current flow employs a statistically-stable model of turbulent diffusion that has been extant since the 1960s. Here we present the first set of detailed spatial data from a gravity current over a rough seafloor that demonstrate that this existing paradigm is not universal. Specifically, in contrast to predictions from turbulent diffusion theory, self-sharpened velocity and concentration profiles and a stable barrier to mixing are observed. Our new observations are explained by statistically-unstable mixing and self-sharpening, by boundary-induced internal gravity waves; as predicted by recent advances in fluid dynamics. Self-sharpening helps explain phenomena such as ultra-long runout of gravity currents and restricted growth of bedforms, and highlights increased geohazard risk to marine infrastructure. These processes likely have broader application, for example to wave-turbulence interaction, and mixing processes in environmental flows.
- Published
- 2019
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32. Newly recognized turbidity current structure can explain prolonged flushing of submarine canyons.
- Author
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Azpiroz-Zabala M, Cartigny MJB, Talling PJ, Parsons DR, Sumner EJ, Clare MA, Simmons SM, Cooper C, and Pope EL
- Abstract
Seabed-hugging flows called turbidity currents are the volumetrically most important process transporting sediment across our planet and form its largest sediment accumulations. We seek to understand the internal structure and behavior of turbidity currents by reanalyzing the most detailed direct measurements yet of velocities and densities within oceanic turbidity currents, obtained from weeklong flows in the Congo Canyon. We provide a new model for turbidity current structure that can explain why these are far more prolonged than all previously monitored oceanic turbidity currents, which lasted for only hours or minutes at other locations. The observed Congo Canyon flows consist of a short-lived zone of fast and dense fluid at their front, which outruns the slower moving body of the flow. We propose that the sustained duration of these turbidity currents results from flow stretching and that this stretching is characteristic of mud-rich turbidity current systems. The lack of stretching in previously monitored flows is attributed to coarser sediment that settles out from the body more rapidly. These prolonged seafloor flows rival the discharge of the Congo River and carry ~2% of the terrestrial organic carbon buried globally in the oceans each year through a single submarine canyon. Thus, this new structure explains sustained flushing of globally important amounts of sediment, organic carbon, nutrients, and fresh water into the deep ocean.
- Published
- 2017
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- View/download PDF
33. Mismeasured mortality: correcting estimates of wolf poaching in the United States.
- Author
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Treves A, Artelle KA, Darimont CT, and Parsons DR
- Abstract
Measuring rates and causes of mortalities is important in animal ecology and management. Observing the fates of known individuals is a common method of estimating life history variables, including mortality patterns. It has long been assumed that data lost when known animals disappear were unbiased. We test and reject this assumption under conditions common to most, if not all, studies using marked animals. We illustrate the bias for 4 endangered wolf populations in the United States by reanalyzing data and assumptions about the known and unknown fates of marked wolves to calculate the degree to which risks of different causes of death were mismeasured. We find that, when using traditional methods, the relative risk of mortality from legal killing measured as a proportion of all known fates was overestimated by 0.05-0.16 and the relative risk of poaching was underestimated by 0.17-0.44. We show that published government estimates are affected by these biases and, importantly, are underestimating the risk of poaching. The underestimates have obscured the magnitude of poaching as the major threat to endangered wolf populations. We offer methods to correct estimates of mortality risk for marked animals of any taxon and describe the conditions under which traditional methods produce more or less bias. We also show how correcting past and future estimates of mortality parameters can address uncertainty about wildlife populations and increase the predictability and sustainability of wildlife management interventions.
- Published
- 2017
- Full Text
- View/download PDF
34. Seasonal expression patterns of clock-associated genes in the blue mussel Mytilus edulis.
- Author
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Chapman EC, O'Dell AR, Meligi NM, Parsons DR, and Rotchell JM
- Subjects
- Animals, Male, Photoperiod, RNA, Messenger metabolism, Sex Factors, Circadian Clocks physiology, Circadian Rhythm genetics, Circadian Rhythm physiology, Mytilus edulis genetics, Seasons
- Abstract
Environmental cues allow organisms to synchronise their internal biological rhythms with external environmental cycles. These rhythms are regulated on a molecular level by oscillating interactions between clock genes and their proteins. Light is a particularly relevant environmental cue, provisioning daily information via light/dark cycles as well as seasonal information via day-length (photoperiod). Despite the ecological and commercial importance of bivalves, little is known about the interactions comprising their molecular clock mechanism. This study investigates the link between the annual seasonal progression and reproductive development in the blue mussel (Mytilus edulis), using mRNA expression patterns of clock-associated genes: Clock, Cry1¸ ARNT, Timeout-like, ROR/HR3 and aaNAT, in the gonads of both sexes, sampled over three daily time-points on a tidal beach during the winter and summer solstices. Significant differences in mRNA expression levels, including some seasonal differences at comparable time-points, were detected for all genes with the exception of Timeout-like. These differences occurred seasonally within sex (Clock, Cry1, ROR/HR3), seasonally between sexes (Clock, Cry1, ARNT, ROR/HR3, aaNAT) and daily between sexes (Cry1), although no significant daily differences were detected in summer or winter for either sex for any of the genes. This study reveals that clock-associated genes show seasonal responses in this species of bivalve. Understanding the mechanisms by which environmental cues drive biological rhythms is critical to understanding the seasonal sensitivity of this keystone species to environmental changes.
- Published
- 2017
- Full Text
- View/download PDF
35. Does the canopy mixing layer model apply to highly flexible aquatic vegetation? Insights from numerical modelling.
- Author
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Marjoribanks TI, Hardy RJ, Lane SN, and Parsons DR
- Abstract
Vegetation is a characteristic feature of shallow aquatic flows such as rivers, lakes and coastal waters. Flow through and above aquatic vegetation canopies is commonly described using a canopy mixing layer analogy which provides a canonical framework for assessing key hydraulic characteristics such as velocity profiles, large-scale coherent turbulent structures and mixing and transport processes for solutes and sediments. This theory is well developed for the case of semi-rigid terrestrial vegetation and has more recently been applied to the case of aquatic vegetation. However, aquatic vegetation often displays key differences in morphology and biomechanics to terrestrial vegetation due to the different environment it inhabits. Here we investigate the effect of plant morphology and biomechanical properties on flow-vegetation interactions through the application of a coupled LES-biomechanical model. We present results from two simulations of aquatic vegetated flows: one assuming a semi-rigid canopy and the other a highly flexible canopy and provide a comparison of the associated flow regimes. Our results show that while both cases display canopy mixing layers, there are also clear differences in the shear layer characteristics and turbulent processes between the two, suggesting that the semi-rigid approximation may not provide a complete representation of flow-vegetation interactions., (© The Author(s) 2016.)
- Published
- 2017
- Full Text
- View/download PDF
36. Fluvial sediment supply to a mega-delta reduced by shifting tropical-cyclone activity.
- Author
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Darby SE, Hackney CR, Leyland J, Kummu M, Lauri H, Parsons DR, Best JL, Nicholas AP, and Aalto R
- Subjects
- Asia, Southeastern, Climate Change, Cyclonic Storms history, History, 20th Century, History, 21st Century, Hydrology, Cyclonic Storms statistics & numerical data, Geologic Sediments analysis, Rain, Rivers chemistry, Tropical Climate
- Abstract
The world's rivers deliver 19 billion tonnes of sediment to the coastal zone annually, with a considerable fraction being sequestered in large deltas, home to over 500 million people. Most (more than 70 per cent) large deltas are under threat from a combination of rising sea levels, ground surface subsidence and anthropogenic sediment trapping, and a sustainable supply of fluvial sediment is therefore critical to prevent deltas being 'drowned' by rising relative sea levels. Here we combine suspended sediment load data from the Mekong River with hydrological model simulations to isolate the role of tropical cyclones in transmitting suspended sediment to one of the world's great deltas. We demonstrate that spatial variations in the Mekong's suspended sediment load are correlated (r = 0.765, P < 0.1) with observed variations in tropical-cyclone climatology, and that a substantial portion (32 per cent) of the suspended sediment load reaching the delta is delivered by runoff generated by rainfall associated with tropical cyclones. Furthermore, we estimate that the suspended load to the delta has declined by 52.6 ± 10.2 megatonnes over recent years (1981-2005), of which 33.0 ± 7.1 megatonnes is due to a shift in tropical-cyclone climatology. Consequently, tropical cyclones have a key role in controlling the magnitude of, and variability in, transmission of suspended sediment to the coast. It is likely that anthropogenic sediment trapping in upstream reservoirs is a dominant factor in explaining past, and anticipating future, declines in suspended sediment loads reaching the world's major deltas. However, our study shows that changes in tropical-cyclone climatology affect trends in fluvial suspended sediment loads and thus are also key to fully assessing the risk posed to vulnerable coastal systems.
- Published
- 2016
- Full Text
- View/download PDF
37. The role of biophysical cohesion on subaqueous bed form size.
- Author
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Parsons DR, Schindler RJ, Hope JA, Malarkey J, Baas JH, Peakall J, Manning AJ, Ye L, Simmons S, Paterson DM, Aspden RJ, Bass SJ, Davies AG, Lichtman ID, and Thorne PD
- Abstract
Biologically active, fine-grained sediment forms abundant sedimentary deposits on Earth's surface, and mixed mud-sand dominates many coasts, deltas, and estuaries. Our predictions of sediment transport and bed roughness in these environments presently rely on empirically based bed form predictors that are based exclusively on biologically inactive cohesionless silt, sand, and gravel. This approach underpins many paleoenvironmental reconstructions of sedimentary successions, which rely on analysis of cross-stratification and bounding surfaces produced by migrating bed forms. Here we present controlled laboratory experiments that identify and quantify the influence of physical and biological cohesion on equilibrium bed form morphology. The results show the profound influence of biological cohesion on bed form size and identify how cohesive bonding mechanisms in different sediment mixtures govern the relationships. The findings highlight that existing bed form predictors require reformulation for combined biophysical cohesive effects in order to improve morphodynamic model predictions and to enhance the interpretations of these environments in the geological record.
- Published
- 2016
- Full Text
- View/download PDF
38. The pervasive role of biological cohesion in bedform development.
- Author
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Malarkey J, Baas JH, Hope JA, Aspden RJ, Parsons DR, Peakall J, Paterson DM, Schindler RJ, Ye L, Lichtman ID, Bass SJ, Davies AG, Manning AJ, and Thorne PD
- Subjects
- Extracellular Space chemistry, Motion, Time Factors, Biopolymers chemistry, Geologic Sediments microbiology
- Abstract
Sediment fluxes in aquatic environments are crucially dependent on bedform dynamics. However, sediment-flux predictions rely almost completely on clean-sand studies, despite most environments being composed of mixtures of non-cohesive sands, physically cohesive muds and biologically cohesive extracellular polymeric substances (EPS) generated by microorganisms. EPS associated with surficial biofilms are known to stabilize sediment and increase erosion thresholds. Here we present experimental data showing that the pervasive distribution of low levels of EPS throughout the sediment, rather than the high surficial levels of EPS in biofilms, is the key control on bedform dynamics. The development time for bedforms increases by up to two orders of magnitude for extremely small quantities of pervasively distributed EPS. This effect is far stronger than for physical cohesion, because EPS inhibit sand grains from moving independently. The results highlight that present bedform predictors are overly simplistic, and the associated sediment transport processes require re-assessment for the influence of EPS.
- Published
- 2015
- Full Text
- View/download PDF
39. Acceptability and implementation of debriefings after trauma resuscitation.
- Author
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Berg GM, Hervey AM, Basham-Saif A, Parsons D, Acuna DL, and Lippoldt D
- Subjects
- Adult, Critical Illness nursing, Critical Illness therapy, Emergency Nursing organization & administration, Female, Health Care Surveys, Humans, Male, Middle Aged, Quality Improvement, Surveys and Questionnaires, Wounds and Injuries diagnosis, Clinical Competence, Interdisciplinary Communication, Patient Care Team organization & administration, Resuscitation methods, Wounds and Injuries therapy
- Abstract
Postresuscitation debriefings allow team members to reflect on performance and discuss areas for improvement. Pre-/postsurveys of trauma team members (physicians, mid-level practitioners, technicians, pharmacists, and nurses) were administered to evaluate the acceptability of debriefings and self-perceptions after multidisciplinary trauma resuscitations. After a 3-month trial period, improvements were observed in perceptions of psychological and patient safety, role on team, team communication, and acceptability of the debriefing initiative. Regrouping for a debriefing requires organizational change, which may be more easily assimilated if team members recognize the potential for process improvement and feel confident about success.
- Published
- 2014
- Full Text
- View/download PDF
40. The effectiveness of surrogate taxa for the representation of biodiversity.
- Author
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Lewandowski AS, Noss RF, and Parsons DR
- Subjects
- Demography, Regression Analysis, Species Specificity, Biodiversity, Conservation of Natural Resources methods, Ecosystem, Models, Biological
- Abstract
Biodiversity is too complex to measure directly, so conservation planning must rely on surrogates to estimate the biodiversity of sites. The species richness of selected taxa is often used as a surrogate for the richness of other taxa. Surrogacy values of taxa have been evaluated in diverse contexts, yet broad trends in their effectiveness remain unclear. We reviewed published studies testing the ability of species richness of surrogate taxa to capture the richness of other (target) taxa. We stratified studies into two groups based on whether a complementarity approach (surrogates used to select a combination of sites that together maximize total species richness for the taxon) or a richness-hotspot approach (surrogates used to select sites containing the highest species richness for the taxon) was used. For each comparison of one surrogate taxon with one target, we used the following predictor variables: biome, spatial extent of study area, surrogate taxon, and target taxon. We developed a binary response variable based on whether the surrogate taxon provided better than random representation of the target taxon. For studies that used an evaluation approach that was not based on better than random representation of target taxa, we based the response variable on the interpretation of results in the original study. We performed a categorical regression to elucidate trends in the effectiveness of surrogate taxa with regard to each of the predictor variables. A surrogate was 25% more likely to be effective with a complementarity approach than with a hotspot approach. For hotspot-based approaches, biome, extent of study, surrogate taxon, and target taxon significantly influenced effectiveness of the surrogate. For complementarity-based approaches, biome, extent, and surrogate taxon significantly influenced effectiveness of the surrogate. For all surrogate evaluations, biome explained the greatest amount of variation in surrogate effectiveness. From most to least, extent, surrogate taxon, and target taxon explained the most variation after biome. Surrogate taxa were most effective in grasslands and in some cases boreal zones, deserts, and tropical forests; surrogate taxa also were more effective in studies examining larger areas. Herpetofauna were the most effective taxon as both surrogate and target when a richness-hotspot approach was used; however, herpetofauna were analyzed in fewer studies, so this result is tentative. For complementarity approaches, taxa that are easy to measure and tend to have a large number of habitat specialists distributed collectively across broad environmental gradients (e.g., plants, birds, and mammals) were the most effective surrogates., (© 2010 Society for Conservation Biology.)
- Published
- 2010
- Full Text
- View/download PDF
41. The bureaucratically imperiled Mexican wolf.
- Author
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Povilitis A, Parsons DR, Robinson MJ, and Becker CD
- Subjects
- Animals, Conservation of Natural Resources economics, Population Dynamics, Conservation of Natural Resources legislation & jurisprudence, Wolves physiology
- Published
- 2006
- Full Text
- View/download PDF
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