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Coccolithophore export fluxes were investigated via the analysis of sinking matter, obtained from Eastern Mediterranean time-series sediment traps moored in three open sites of the north-eastern Mediterranean Sea located in the Athos Basin of North Aegean (M2 site), Cretan Sea of South Aegean (M3 site) and at Ionian Sea (Nestor site). The aim of our study was to determine the spatial, temporal and seasonal variability in coccolithophore fluxes, as well as to estimate coccolith biogenic carbonate contribution to the sedimentation process. Data from an additional time-series sediment trap located in the southwestern Black Sea were also considered for the comparison of the oligotrophic Eastern Mediterranean setting with the eutrophic Black Sea. Coccolithophore fluxes revealed a highly seasonal pattern during February–March in the North Aegean (peak in late February 2015: 85.6 x 105 coccospheres m−2 day−1; 27.9 x 108 coccoliths m−2 day−1), during March–May in the Cretan Sea (peak in late March 2015: 33.7 x 105 coccospheres m−2 day−1; 19.5 x 108 coccoliths m−2 day−1) and during February–March and May–June in the Ionian Sea (peak in late May 2012: 14.3 x 105 coccospheres m−2 day−1; 1.53 x 108 coccoliths m−2 day−1). The recorded maxima coincide with low sea surface temperatures, increased precipitation and high PIC fluxes. Coccosphere fluxes were dominated by Emiliania huxleyi comprising ~70% of the total abundance, in the North Aegean and ~50% in the Cretan and Ionian Seas. Syracosphaera pulchra was also prominent in the study sites, where its abundance reached 14% in the North Aegean and ~10% in the Cretan and Ionian Seas respectively. Florisphaera profunda represented one of the major taxa in the coccolith fluxes of all three Eastern Mediterranean sites (~25% in North Aegean, ~20% in Cretan and Ionian Seas), while Algirosphaera robusta and Umbilicosphaera sibogae were the most abundant among the minor taxa. The North Aegean Sea exhibited a considerably higher coccolith

Quantitative coccolithophore analyses were performed on data of 2011–2015 dataset derived from the examination of plankton samples (until 100 m water depth), the sinking particulate matter (collected by a time series sediment trap) and surface and core sediments of the North Aegean Sea sampling site M2 (Athos Basin, NE Mediterranean). The aim was to achieve a better understanding of the potential modifications of the coccolithophore assemblage between the surface waters (plankton), the water column (sidocoenosis) and the underlying sediment (thanatocoenosis). Sediment trap calcareous nannoplankton multiannual mean fluxes (20 × 108 coccoliths m2 day−1) documented similar values to the accumulation rates recorded in the surface sediment (23.6 × 108 coccoliths m−2 day−1), whereas within the last 500 years the rates have ranged from 2.19 × 108 to 5.4 × 108 coccoliths m−2 day−1. The dominant species in all sampling types was Emiliania huxleyi, reaching in some cases striking relative abundances of 85–90%. Morphometric analyses on E. huxleyi coccoliths documented the presence of a lightly calcified morphotype in the water column and sediment trap samples in addition to the seasonal occurrence of heavier calcified E. huxleyi coccoliths, indicating enhanced Black Sea water inflows during May 2011, February 2015 and October 2015. However, such a signal was not preserved in the surface sediment assemblage mostly due to processes of diagenetic calcite overgrowth. Notably, Florisphaera profunda was not included in the upper water column plankton assemblage but in the sediment traps and surface sediments. Thus, it is presumed to flourish in nutrient-enriched layers below the sampled 100 m water column depth. Several fragile Syracosphaeraceae and holococcolithophore species and the delicate Algirosphaera robusta were not present in the sinking assemblage or on the seafloor; however, the main features of the living assemblages were generally preserved. The recorded high relative a