283 results on '"P. Synowiec"'
Search Results
2. SoccerNet 2023 Challenges Results
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Cioppa, Anthony, Giancola, Silvio, Somers, Vladimir, Magera, Floriane, Zhou, Xin, Mkhallati, Hassan, Deliège, Adrien, Held, Jan, Hinojosa, Carlos, Mansourian, Amir M., Miralles, Pierre, Barnich, Olivier, De Vleeschouwer, Christophe, Alahi, Alexandre, Ghanem, Bernard, Van Droogenbroeck, Marc, Kamal, Abdullah, Maglo, Adrien, Clapés, Albert, Abdelaziz, Amr, Xarles, Artur, Orcesi, Astrid, Scott, Atom, Liu, Bin, Lim, Byoungkwon, Chen, Chen, Deuser, Fabian, Yan, Feng, Yu, Fufu, Shitrit, Gal, Wang, Guanshuo, Choi, Gyusik, Kim, Hankyul, Guo, Hao, Fahrudin, Hasby, Koguchi, Hidenari, Ardö, Håkan, Salah, Ibrahim, Yerushalmy, Ido, Muhammad, Iftikar, Uchida, Ikuma, Be'ery, Ishay, Rabarisoa, Jaonary, Lee, Jeongae, Fu, Jiajun, Yin, Jianqin, Xu, Jinghang, Nang, Jongho, Denize, Julien, Li, Junjie, Zhang, Junpei, Kim, Juntae, Synowiec, Kamil, Kobayashi, Kenji, Zhang, Kexin, Habel, Konrad, Nakajima, Kota, Jiao, Licheng, Ma, Lin, Wang, Lizhi, Wang, Luping, Li, Menglong, Zhou, Mengying, Nasr, Mohamed, Abdelwahed, Mohamed, Liashuha, Mykola, Falaleev, Nikolay, Oswald, Norbert, Jia, Qiong, Pham, Quoc-Cuong, Song, Ran, Hérault, Romain, Peng, Rui, Chen, Ruilong, Liu, Ruixuan, Baikulov, Ruslan, Fukushima, Ryuto, Escalera, Sergio, Lee, Seungcheon, Chen, Shimin, Ding, Shouhong, Someya, Taiga, Moeslund, Thomas B., Li, Tianjiao, Shen, Wei, Zhang, Wei, Li, Wei, Dai, Wei, Luo, Weixin, Zhao, Wending, Zhang, Wenjie, Yang, Xinquan, Ma, Yanbiao, Joo, Yeeun, Zeng, Yingsen, Gan, Yiyang, Zhu, Yongqiang, Zhong, Yujie, Ruan, Zheng, Li, Zhiheng, Huang, Zhijian, and Meng, Ziyu
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence - Abstract
The SoccerNet 2023 challenges were the third annual video understanding challenges organized by the SoccerNet team. For this third edition, the challenges were composed of seven vision-based tasks split into three main themes. The first theme, broadcast video understanding, is composed of three high-level tasks related to describing events occurring in the video broadcasts: (1) action spotting, focusing on retrieving all timestamps related to global actions in soccer, (2) ball action spotting, focusing on retrieving all timestamps related to the soccer ball change of state, and (3) dense video captioning, focusing on describing the broadcast with natural language and anchored timestamps. The second theme, field understanding, relates to the single task of (4) camera calibration, focusing on retrieving the intrinsic and extrinsic camera parameters from images. The third and last theme, player understanding, is composed of three low-level tasks related to extracting information about the players: (5) re-identification, focusing on retrieving the same players across multiple views, (6) multiple object tracking, focusing on tracking players and the ball through unedited video streams, and (7) jersey number recognition, focusing on recognizing the jersey number of players from tracklets. Compared to the previous editions of the SoccerNet challenges, tasks (2-3-7) are novel, including new annotations and data, task (4) was enhanced with more data and annotations, and task (6) now focuses on end-to-end approaches. More information on the tasks, challenges, and leaderboards are available on https://www.soccer-net.org. Baselines and development kits can be found on https://github.com/SoccerNet.
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- 2023
3. SoccerNet 2023 challenges results
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Cioppa, Anthony, Giancola, Silvio, Somers, Vladimir, Magera, Floriane, Zhou, Xin, Mkhallati, Hassan, Deliège, Adrien, Held, Jan, Hinojosa, Carlos, Mansourian, Amir M., Miralles, Pierre, Barnich, Olivier, De Vleeschouwer, Christophe, Alahi, Alexandre, Ghanem, Bernard, Van Droogenbroeck, Marc, Kamal, Abdullah, Maglo, Adrien, Clapés, Albert, Abdelaziz, Amr, Xarles, Artur, Orcesi, Astrid, Scott, Atom, Liu, Bin, Lim, Byoungkwon, Chen, Chen, Deuser, Fabian, Yan, Feng, Yu, Fufu, Shitrit, Gal, Wang, Guanshuo, Choi, Gyusik, Kim, Hankyul, Guo, Hao, Fahrudin, Hasby, Koguchi, Hidenari, Ardö, Håkan, Salah, Ibrahim, Yerushalmy, Ido, Muhammad, Iftikar, Uchida, Ikuma, Be’ery, Ishay, Rabarisoa, Jaonary, Lee, Jeongae, Fu, Jiajun, Yin, Jianqin, Xu, Jinghang, Nang, Jongho, Denize, Julien, Li, Junjie, Zhang, Junpei, Kim, Juntae, Synowiec, Kamil, Kobayashi, Kenji, Zhang, Kexin, Habel, Konrad, Nakajima, Kota, Jiao, Licheng, Ma, Lin, Wang, Lizhi, Wang, Luping, Li, Menglong, Zhou, Mengying, Nasr, Mohamed, Abdelwahed, Mohamed, Liashuha, Mykola, Falaleev, Nikolay, Oswald, Norbert, Jia, Qiong, Pham, Quoc-Cuong, Song, Ran, Hérault, Romain, Peng, Rui, Chen, Ruilong, Liu, Ruixuan, Baikulov, Ruslan, Fukushima, Ryuto, Escalera, Sergio, Lee, Seungcheon, Chen, Shimin, Ding, Shouhong, Someya, Taiga, Moeslund, Thomas B., Li, Tianjiao, Shen, Wei, Zhang, Wei, Li, Wei, Dai, Wei, Luo, Weixin, Zhao, Wending, Zhang, Wenjie, Yang, Xinquan, Ma, Yanbiao, Joo, Yeeun, Zeng, Yingsen, Gan, Yiyang, Zhu, Yongqiang, Zhong, Yujie, Ruan, Zheng, Li, Zhiheng, Huang, Zhijian, and Meng, Ziyu
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- 2024
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4. Biochemistry of microwave controlled Heracleum sosnowskyi (Manden.) roots with an ecotoxicological aspect
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Słowiński, Krzysztof, Grygierzec, Beata, Wajs-Bonikowska, Anna, Baran, Agnieszka, Tabor, Sylwester, Waligórski, Pitr, Rys, Magdalena, Bocianowski, Jan, and Synowiec, Agnieszka
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- 2024
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5. The effect of caraway oil-loaded bio-nanoemulsions on the growth and performance of barnyard grass and maize
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Rys, Magdalena, Miastkowska, Małgorzata, Łętocha, Anna, Wajs-Bonikowska, Anna, Lorenzo, Paula, and Synowiec, Agnieszka
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- 2024
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6. One-Year Consistent Safety, Utilization, and Efficacy Assessment of Remote Electrical Neuromodulation (REN) for Migraine Treatment
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Synowiec, Andrea, Stark-Inbar, Alit, Weinstein, Maya, Ironi, Alon, and Mauskop, Alexander
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- 2024
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7. Biochemistry of microwave controlled Heracleum sosnowskyi (Manden.) roots with an ecotoxicological aspect
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Krzysztof Słowiński, Beata Grygierzec, Anna Wajs-Bonikowska, Agnieszka Baran, Sylwester Tabor, Pitr Waligórski, Magdalena Rys, Jan Bocianowski, and Agnieszka Synowiec
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Control ,Ecotoxicology ,Essential oil ,Fatty acids ,Roots ,Sugars ,Medicine ,Science - Abstract
Abstract Sosnowski hogweed is an invasive weed in eastern-middle Europe that is dangerous to human health and the environment. The efficacy of its control using chemical and mechanical methods is limited. Electromagnetic radiation (microwaves) could be an environmentally friendly alternative for controlling this species. This study aims to: (1) Determine the effect of varying microwave treatment (MWT) durations on the control of S. hogweed using a device emitting microwaves at 2.45 GHz, 32.8 kW/m2; (2) Evaluate the impact of MWT on soil by an ecotoxicological bioassays; (3) Analyze biochemical changes occurring in the roots during the process. A field study was performed to assess the efficacy of S. hogweed control using MWT in times from 2.5 to 15 min. The MWT-treated soil was collected immediately after treatment (AT) and tested using bioassays (Phytotoxkit, Ostracodtoxkit, and Microtox). Fourteen days AT, the MWT hogweed roots were dug out, air-dried, and analyzed for the content and composition of essential oil, sugars, and fatty acids. According to the ecotoxicological biotests, the MWT soils were classified as non-toxic or low-toxic. The regeneration of hogweed was observed only in non-treated plants (control). Hogweed MWT for 2.5–15 min did not regenerate up to 14 days AT. The average weight of roots in hogweed MWT for 15.0 min was ca. two times smaller than the control plants. Those roots contained significantly higher amounts of sugars and saturated fatty acids than the control. We did not find a correlation between S. hogweed root essential oil content and composition and MWT time. The main compounds of essential oil were p‑cymene and myristicin. No highly photosensitizing compounds were identified in the tested root oil. We conclude that MWT of S. hogweed could be an environmentally safe and prospective control method, but more studies are needed.
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- 2024
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8. Agroecological practices for sustainable weed management in Mediterranean farming landscapes
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Boutagayout, Abdellatif, Bouiamrine, El Houssine, Synowiec, Agnieszka, Oihabi, Kamal El, Romero, Pascual, Rhioui, Wijdane, Nassiri, Laila, and Belmalha, Saadia
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- 2023
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9. The effect of caraway oil-loaded bio-nanoemulsions on the growth and performance of barnyard grass and maize
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Magdalena Rys, Małgorzata Miastkowska, Anna Łętocha, Anna Wajs-Bonikowska, Paula Lorenzo, and Agnieszka Synowiec
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Biochemical changes ,Carum carvi essential oil ,Herbicidal effect ,Physicochemical properties ,Polydispersity index ,Phytotoxicity ,Medicine ,Science - Abstract
Abstract A proper formulation is crucial to improve the herbicidal effects of essential oils and their selectivity. In this study, we investigated the physicochemical properties of bio-based nanoemulsions (CNs) containing several concentrations of caraway (Carum carvi) essential oil stabilized with Eco Tween 80, as a surfactant, maintaining 1:1 proportions. Detailed physicochemical characteristics of the CNs revealed that their properties were most desired at 2% of the oil and surfactant, i.e., the smallest droplet size, polydispersity index, and viscosity. The CNs caused biochemical changes in maize and barnyard grass (Echinochloa crus-galli) seedlings, however, to a different extent. Barnyard grass has overall metabolism (measured as a thermal power) decreased by 39–82% when exposed to the CNs. The CNs triggered changes in the content and composition of carbohydrates in the endosperm of both species' seedlings in a dose–response manner. The foliar application of CNs caused significant damage to tissues of young maize and barnyard grass plants. The effective dose of the CN (ED50, causing a 50% damage) was 5% and 17.5% oil in CN for barnyard grass and maize tissues, respectively. Spraying CNs also decreased relative water content in leaves and affected the efficiency of photosynthesis by disturbing the electron transport chain. We found that barnyard grass was significantly more susceptible to the foliar application of CNs than maize, which could be used to selectively control this species in maize crops. However, further studies are needed to verify this hypothesis under field conditions.
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- 2024
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10. Intestinal microbiota modulates neuroinflammatory response and brain injury after neonatal hypoxia-ischemia
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Alexander Drobyshevsky, Sylvia Synowiec, Ivan Goussakov, Rafael Fabres, Jing Lu, and Michael Caplan
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Gut-brain interaction ,neuroinflammation ,hypoxia-ischemia ,perinatal brain injury ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
ABSTRACTPremature infants lack a normal intestinal microbial community and also at risk of perinatal hypoxic-ischemic (HI) brain injury, which is considered to be one of the major factors for motor, sensory, and cognitive deficits. We hypothesized that neonatal gut microbiota composition modulated the immune reaction and severity of neonatal H-I brain injury. Neonatal C57BL/6J mouse pups were exposed to H-I protocol consisting of permanent left carotid artery ligation, followed by 8% hypoxia for 60 min. Microbial manipulation groups included 1) antibiotic treatment, E18 (maternal) to P5; 2) antibiotic treatment E18 to P5 + E. coli gavage; 3) antibiotic treatment E18 to P5 + B. infantis gavage; and 4) saline to pups with dams getting fresh water. The extent of brain injury and recovery was measured on MRI. Edematous injury volume was significantly higher in E. coli group than that in B. infantis group and in fresh water group. Gene expression in brains of pro-inflammatory cytokines (IL1β, IL6, IL2, TNF-α and toll-like receptors 2–6) were elevated to a greater extent in the E. coli group at P10, no injury, and at P13, 72 hours after H-I relative to sham control and B. infantis groups. Significant effects of microbiome and brain injury and interaction of these factors were found in abundance of major phyla. The neuroinflammatory response and brain injury after neonatal hypoxia-ischemia are affected by intestinal microbiota, providing opportunities for therapeutic intervention through targeting the early colonization and development of the gut microbiota.
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- 2024
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11. Halimane Derivatives from Plectranthus ornatus Codd. as Novel Anti-cancer Agents
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Gabrielle Bangay, Florencia Z. Brauning, Tomasz Kowalczyk, Anna Merecz-Sadowska, Ewelina Synowiec, Tomasz Śliwiński, Nuno Candeias, Monica S. Estevão, Carlos A.M. Afonso, Vânia André, Przemysław Sitarek, and Patrícia Rijo
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Plectranthus ornatus ,Diterpene ,Halimane ,Cytotoxic ,Anti-inflammatory ,Anti-oxidant ,Therapeutics. Pharmacology ,RM1-950 - Abstract
The Plectranthus genus is often cited for its medicinal properties. Plectranthus ornatus Codd. is traditionally used in Africa for the treatment of gastric and liver diseases and their leaves are used for their antibiotic action. The main constituent of P. ornatus is the halimane compound, 11 R∗−acetoxyhalima−5,13E−dien−15−oic acid (Hal), described for its antimicrobial and anticancer properties. The objective of this work was to improve the activity of the halimane lead molecule. Further physiochemical characterisation was performed on Hal. To the best of our knowledge, this work constitutes the first published data of the absolute configurations by SCXRD and thermal stability of Hal. Using Hal, reactions with different amines were carried out to afford novel semi-synthetic derivatives and their structural elucidation was completed. The cytotoxicity of the derivatives was assessed against three leukaemia cancer cell lines (CCRF-CEM, K562 and HL-60). The antioxidant activity was investigated using H2O2-induced HGF-1 cells and their anti-inflammatory activity was studied using RT-PCR and ELISA. Our data showed that amide derivatives of Hal presented moderate cytotoxicity and more potent activity when compared to the parent molecule, giving insight into the SAR of Hal. The derivatives also displayed protection against oxidative damage to DNA. Finally, the derivatives possessed anti-inflammatory properties at the level of gene and protein expression for the cytokines IL-1β, TNF-α and IL-6, induced by LPS in normal HGF-1 cells. Overall, our study provides useful insight into the enhanced biological activities of semi-synthetic Hal derivatives, as a starting point for novel drug formulations in cancer therapy.
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- 2024
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12. Polθ Inhibitor (ART558) Demonstrates a Synthetic Lethal Effect with PARP and RAD52 Inhibitors in Glioblastoma Cells
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Gabriela Barszczewska-Pietraszek, Piotr Czarny, Małgorzata Drzewiecka, Maciej Błaszczyk, Maciej Radek, Ewelina Synowiec, Paulina Wigner-Jeziorska, Przemysław Sitarek, Janusz Szemraj, Tomasz Skorski, and Tomasz Śliwiński
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Polθ ,RAD52 ,PARP1 inhibitors ,synthetic lethality ,DNA repair ,DNA damage ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
DNA repair proteins became the popular targets in research on cancer treatment. In our studies we hypothesized that inhibition of DNA polymerase theta (Polθ) and its combination with Poly (ADP-ribose) polymerase 1 (PARP1) or RAD52 inhibition and the alkylating drug temozolomide (TMZ) has an anticancer effect on glioblastoma cells (GBM21), whereas it has a low impact on normal human astrocytes (NHA). The effect of the compounds was assessed by analysis of cell viability, apoptosis, proliferation, DNA damage and cell cycle distribution, as well as gene expression. The main results show that Polθ inhibition causes a significant decrease in glioblastoma cell viability. It induces apoptosis, which is accompanied by a reduction in cell proliferation and DNA damage. Moreover, the effect was stronger when dual inhibition of Polθ with PARP1 or RAD52 was applied, and it is further enhanced by addition of TMZ. The impact on normal cells is much lower, especially when considering cell viability and DNA damage. In conclusion, we would like to highlight that Polθ inhibition used in combination with PARP1 or RAD52 inhibition has great potential to kill glioblastoma cells, and shows a synthetic lethal effect, while sparing normal astrocytes.
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- 2024
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13. The Influence of Betulin and Its Derivatives on Selected Colorectal Cancer Cell Lines’ Viability and Their Antioxidant Systems
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Marcel Madej, Celina Kruszniewska-Rajs, Magdalena Kimsa-Dudek, Agnieszka Synowiec-Wojtarowicz, Elwira Chrobak, Ewa Bębenek, Stanisław Boryczka, Stanisław Głuszek, Jolanta Adamska, Sebastian Kubica, Jarosław Matykiewicz, and Joanna Magdalena Gola
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betulin ,derivatives ,oxidative stress ,colorectal cancer ,cell lines ,CAT ,Cytology ,QH573-671 - Abstract
Oxidative stress is considered one of the main reasons for the development of colorectal cancer (CRC). Depending on the stage of the disease, variable activity of the main antioxidant enzymes, i.e., superoxide dismutase (SOD), catalase (CAT) and glutathione peroxidase (GPx), is observed. Due to limited treatment methods for CRC, new substances with potential antitumor activity targeting pathways related to oxidative stress are currently being sought, with substances of natural origin, including betulin, leading the way. The betulin molecule is chemically modified to obtain new derivatives with improved pharmacokinetic properties and higher biological activity. The aim of this study was to evaluate the effects of betulin and its new derivatives on viability and major antioxidant systems in colorectal cancer cell lines. The study showed that betulin and its derivative EB5 affect the antioxidant enzyme activity to varying degrees at both the protein and mRNA levels. The SW1116 cell line is more resistant to the tested compounds than RKO, which may be due to differences in the genetic and epigenetic profiles of these lines.
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- 2024
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14. Synthesis of HAp by Means of Sonoprecipitation Method
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Magdalena Stec, Piotr Maria Synowiec, and Agnieszka Stolarczyk
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sonoprecipitation ,hydroxyapatite (HAp) ,nanoparticles ,ultrasounds (US) ,static mixer (STM) ,Technology ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Microscopy ,QH201-278.5 ,Descriptive and experimental mechanics ,QC120-168.85 - Abstract
Biomaterials, like hydroxyapatite (HAp), are the subject of many scientific investigations. Their specific application, however, is determined by the form and some characteristic features of the resulting material. Synthesis methods and optimization procedures leading to a product of predetermined characteristics are therefore of great interest. To broaden the existing knowledge, sonoprecipitation was investigated as a potential method for the production of nanosized HAp particles. The research was carried out in a static mixer (STM) immersed in the ultrasonic bath. The influence of operating conditions, e.g., ultrasonic power PUS (εUS), ultrasonic frequency (fUS), and unit mixing power (εmix), was investigated in terms of nucleation intensity, product quality, and characteristics (particle size distribution (PSD), mean size, shape, etc.). As a result, the optimal conditions for the HAp nanoparticles synthesis (mean size: d~150 nm; length: L1~250 nm; width: L2~80 nm) in the form of needles/whiskers/rods—similar to the shape of the HAp present in natural human bones, free from agglomerates, with negligible signs of particle destruction—were determined. The formation of HAp of smaller sizes (d ≤ 100 nm) and more compact shapes (L1~155 nm, L2~90 nm), useful in bone regeneration processes, was also discussed.
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- 2024
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15. Phenolic acids and a static magnetic field change the expression of transforming growth factor β isoforms in amelanotic melanoma cells
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Kimsa-Dudek, Magdalena, Synowiec-Wojtarowicz, Agnieszka, and Krawczyk, Agata
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- 2023
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16. Emergence and Phenological Development of Herbicide-Sensitive and Herbicide-Resistant Biotypes of Apera Spica-Venti and Winter Wheat under Competition
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Beata Jop, Tomasz Wójtowicz, Katarzyna Marczewska-Kolasa, Mariusz Kucharski, and Agnieszka Synowiec
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additive model ,silky bentgrass ,BBCH scale ,emergence ,duration of the developmental phases ,Agriculture (General) ,S1-972 - Abstract
As a result of intensive herbicide protection of crops against silky bentgrass (Apera spica-venti (L.) P. Beauv), numerous herbicide-resistant biotypes have been selected, mainly from the group of acetolactate synthase (ALS) inhibitors. We analyzed the development of herbicide-sensitive and herbicide-resistant biotypes of bentgrass and winter wheat under competition, taking into account selected physical and chemical properties of the soil, including nitrogen fertilization. The pot experiment (additive model) was conducted in the 2018/19 and 2019/20 seasons. The experimental factors included: (1) bentgrass with different sensitivity levels to herbicides from the groups HRAC/WSSA 1 and HRAC/WSSA 2, specifically two sensitive and three resistant biotypes; (2) two types of soil, sandy and clay; and (3) nitrogen fertilization, both with and without fertilization. Winter wheat and bentgrass development was assessed during each growing season, every 5 or 3 days from September until May, using the BBCH scale. The emergence date of the tested species/biotypes was recorded. The development of competing species was compared based on a new, proposed index: the duration of the developmental phases. As a result, the soil type and fertilization level differentiated wheat and bentgrass emergence dates and development. The autumn development of the competing species was slower and more uniform than the spring one. At the same time, the dynamics of the bentgrass and wheat development in the spring were greater. Bentgrass and winter wheat emerged earlier and grew more intensively on clay and fertilized soil. To sum up, no clear relationship was found between the resistance/sensitivity of bentgrass to herbicides and changes in the phenological development of plants in competition with winter wheat.
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- 2024
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17. Comparison of Physicochemical Characteristics and Microbial Quality between Commercially Available Organic and Conventional Japanese Soy Sauces
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Iwona Gientka, Alicja Synowiec, Marek Roszko, Cac Ngo Khoa Nguyen, Katarzyna Pobiega, and Anna M. Kot
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soy sauce ,organic food ,volatile chemicals ,amino acids content ,antioxidant activity ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The article aims to compare the properties and quality of two types of organic Japanese soy sauce from the market, declared by manufacturers as koikuchi, and tamari, both conventional and organic, along with an attempt to determine the differentiating factors using modern statistical methods. The amino acid profile showed the highest proportions were glutamic acid and aspartic acid. Tamari sauces could be distinguished from koikuchi by an elevated content of glutamic acid and alanine, while conventional and organic products differed the most in the shares of arginine, aspartic acid, and serine. The total polyphenol content was higher in conventional soy sauces and better antioxidant properties were found in koikuchi. Organic tamari sauces were characterized by higher antioxidant capacities and total flavonoid content. The volatile profile showed a significant difference between organic and conventional sauces. The research did not confirm that the quality of sauces declared as organic was significantly enhanced, and the overall quality of all tested sauces was high, both in terms of microbiological safety and physicochemical parameters.
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- 2024
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18. Context-Aware Learning to Rank with Self-Attention
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Pobrotyn, Przemysław, Bartczak, Tomasz, Synowiec, Mikołaj, Białobrzeski, Radosław, and Bojar, Jarosław
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Computer Science - Information Retrieval - Abstract
Learning to rank is a key component of many e-commerce search engines. In learning to rank, one is interested in optimising the global ordering of a list of items according to their utility for users.Popular approaches learn a scoring function that scores items individually (i.e. without the context of other items in the list) by optimising a pointwise, pairwise or listwise loss. The list is then sorted in the descending order of the scores. Possible interactions between items present in the same list are taken into account in the training phase at the loss level. However, during inference, items are scored individually, and possible interactions between them are not considered. In this paper, we propose a context-aware neural network model that learns item scores by applying a self-attention mechanism. The relevance of a given item is thus determined in the context of all other items present in the list, both in training and in inference. We empirically demonstrate significant performance gains of self-attention based neural architecture over Multi-LayerPerceptron baselines, in particular on a dataset coming from search logs of a large scale e-commerce marketplace, Allegro.pl. This effect is consistent across popular pointwise, pairwise and listwise losses.Finally, we report new state-of-the-art results on MSLR-WEB30K, the learning to rank benchmark., Comment: 8 pages, published at SIGIR eCom'20
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- 2020
19. Reversible rearrangement of the cellular cytoskeleton: A key to the broad-spectrum antiviral activity of novel amphiphilic polymers
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Agnieszka Dabrowska, Pawel Botwina, Emilia Barreto-Duran, Agata Kubisiak, Magdalena Obloza, Aleksandra Synowiec, Artur Szczepanski, Marta Targosz-Korecka, Krzysztof Szczubialka, Maria Nowakowska, and Krzysztof Pyrc
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Polymers ,Nanomaterials ,Coronaviruses ,Antivirals ,Broad-spectrum ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
The battle against emerging viral infections has been uneven, as there is currently no broad-spectrum drug available to contain the spread of novel pathogens throughout the population. Consequently, the pandemic outbreak that occurred in early 2020 laid bare the almost empty state of the pandemic box. Therefore, the development of novel treatments with broad specificity has become a paramount concern in this post-pandemic era.Here, we propose copolymers of poly (sodium 2-(acrylamido)-2-methyl-1-propanesulfonate) (PAMPS) and poly (sodium 11-(acrylamido)undecanoate (AaU), both block (PAMPS75-b-PAaUn) and random (P(AMPSm-co-AaUn)) that show efficacy against a broad range of alpha and betacoronaviruses.Owing to their intricate architecture, these polymers exhibit a highly distinctive mode of action, modulating nano-mechanical properties of cells and thereby influencing viral replication. Through the employment of confocal and atomic force microscopy techniques, we discerned perturbations in actin and vimentin filaments, which correlated with modification of cellular elasticity and reduction of glycocalyx layer. Intriguingly, this process was reversible upon polymer removal from the cells. To ascertain the applicability of our findings, we assessed the efficacy and underlying mechanism of the inhibitors using fully differentiated human airway epithelial cultures, wherein near-complete abrogation of viral replication was documented.Given their mode of action, these polymers can be classified as biologically active nanomaterials that exploit a highly conserved molecular target—cellular plasticity—proffering the potential for truly broad-spectrum activity while concurrently for drug resistance development is minimal.
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- 2023
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20. Jak w czasach niegodnych zachować godność. Kazimierz Stołyhwo podczas II wojny światowej
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Andrzej Synowiec
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History (General) and history of Europe - Abstract
How to Maintain Dignity in Undignified Times. Kazimierz Stołyhwo during the Second World War Kazimierz Stołyhwo (1880-1966) was an outstanding Polish anthropologist. On November 6, 1939, together with other professors of the Jagiellonian University, he was arrested by the Germans during the “Sonderaktion Krakau”, and then transported to the concentration camp in Sachsenhausen. Stołyhwo described his camp and wartime experiences in detail in a little-known, but valuable publication In captivity of the NSDAP. Biographical Summary in the Period from September 1, 1939 to January 18, 1945 (Kraków 1946). During this difficult time, he proved to be a righteous and uncompromising man. Sick and exhausted, he was finally released from the camp on April 23, 1940 – it was the result of pressure from European politicians and scientists. After the war, Stołyhwo continued to work at the Jagiellonian University.
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- 2023
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21. The Role of GC-EI-MS and Derivatization in the Detection of New Psychoactive Substances Exemplified by 49 Synthetic Cathinones
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Synowiec, Kamil, Rojek, Sebastian, Maciów-Głąb, Martyna, Kula, Karol, Romańczuk, Agnieszka, and Kłys, Małgorzata
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- 2022
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22. Static Magnetic Field Reduces the Anticancer Effect of Hinokitiol on Melanoma Malignant Cells—Gene Expression and Redox Homeostasis Studies
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Agnieszka Synowiec-Wojtarowicz, Agata Krawczyk, and Magdalena Kimsa-Dudek
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hinokitiol ,static magnetic field ,melanoma malignant ,redox homeostasis ,gene expression ,Medicine ,Pharmacy and materia medica ,RS1-441 - Abstract
Background: Melanoma malignant is characterized by a high mortality rate, accounting for as much as 65% of deaths caused by skin cancer. A potential strategy in cancer treatment may be the use of natural compounds, which include hinokitiol (β-Thujaplicin), a phenolic component of essential oils extracted from cypress trees. Many studies confirm that a high-induction SMF (static magnetic field) has anticancer effects and can be used as a non-invasive anticancer therapy in combination with or without drugs. Aim: The aim of this experiment was to evaluate the effect of a static magnetic field on melanoma cell cultures (C32 and COLO 829) treated with hinokitiol. Methods and Results: Melanoma cells were exposed to a static magnetic field of moderate induction and hinokitiol. The research included determining the activity of the antioxidant enzymes (SOD, GPx, and CAT) and MDA concentration as well as the gene expression profile. Conclusion: Hinokitiol disturbs the redox homeostasis of C32 and COLO 829 melanoma malignant cells. Moreover, a static magnetic field has a protective effect on melanoma malignant cells and abolishes the anticancer effect of hinokitiol.
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- 2024
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23. Biological Properties of Extracts Obtained from In Vitro Culture of Plectranthus scutellarioides in a Cell Model
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Tomasz Kowalczyk, Joanna Sikora, Anna Merecz-Sadowska, Wirginia Kukula-Koch, Ewelina Synowiec, Agata Majda, Dawid Juda, Tomasz Śliwiński, and Przemysław Sitarek
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in vitro plant culture of Plectranthus scutellarioides extracts ,phytochemical screening ,cytotoxic effect ,apoptosis induction ,antiplatelet effect ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Plectranthus scutellarioides (L.) R.Br. is a medicinal plant that has long been used in traditional medicine to treat conditions such as abscesses, ulcers, and ear and eye infections. It is known to have a wide range of biological properties, such as antibacterial, antioxidant, antifungal, anti-inflammatory, anti-diabetic and anti-cancer effects. In this study, we established in vitro cultures from both the aerial parts and roots of Plectranthus scutellarioides. Subsequently, we compared the basic phytochemical profile of the obtained extracts and conducted a biological analysis to assess their potential for inducing apoptosis in breast (MCF-7) and lung (A549) cancer cells. Phytochemical analysis by HPLC-MS revealed the presence of compounds belonging to phenolic acids (ferulic, syringic, vanillic, rosmarinic, chlorogenic, caffeic, coumaric, dihydroxybenzoic acids), flavonoids (eriodyctiol and cirsimaritin), and terpenes such as 6,11,12,14,16-Pentahydroxy-3,17diacetyl-8,11,13-abietatrien-7-one, 6,11,12,14,16-Pentahydroxy-3,17-diacetyl5,8,11,13-abietatetraen-7-one, and 3,6,12-Trihydroxy-2-acetyl-8,12-abietadien7,11,14-trione. The results show that both extracts have a cytotoxic and genotoxic effect against MCF-7 and A549 cancer cells, with a different degree of sensitivity. It was also shown that both extracts can induce apoptosis by altering the expression of apoptotic genes (Bax, Bcl-2, TP53, Fas, and TNFSF10), reducing mitochondrial membrane potential, increasing ROS levels, and increasing DNA damage. In addition, it has been shown that the tested extracts can alter blood coagulation parameters. Our results indicate that extracts from in vitro cultures of Plectranthus scutellarioides aerial parts and roots have promising therapeutic application, but further research is needed to better understand the mechanisms of their action in the in vitro model.
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- 2024
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24. Microwave Control of Reynoutria japonica Houtt., Including Ecotoxicological Aspects and the Resveratrol Content in Rhizomes
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Krzysztof Słowiński, Beata Grygierzec, Agnieszka Baran, Sylwester Tabor, Diletta Piatti, Filippo Maggi, and Agnieszka Synowiec
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electromagnetic microwaves ,invasive weed ,non-chemical weed control ,physical control ,HPLC-MS/MS ,Botany ,QK1-989 - Abstract
Japanese knotweed (Reynoutria japonica Houtt.) is Poland’s invasive weed, for which there is no efficient control method. The rhizomes of this species are rich in resveratrol. In this work, we evaluated (1) the effectiveness of electromagnetic microwaves (MV) in destroying Japanese knotweed using an original device, HOGWEED (MV of 2450 MHz), (2) the ecotoxic effect of the MV on the soil environment, and (3) the resveratrol content in knotweed rhizomes after MV treatment. The field studies were carried out in 2022 in southern Poland. Cut plants were MV-treated for times of 5.0–25.0 min. The MV efficiency was checked 10 and 56 days after treatment (DAT). After MV treatment, fresh soil samples were taken to analyze their ecotoxicity. As a result, at 56 DAT, knotweed was controlled if MV was used for at least 20.0 min. The MV did not affect the soil ecotoxicity. The MV-treated soils were classified as non-toxic or low-toxic. To analyze the resveratrol content, healthy knotweed rhizomes were dug out, treated with MV in the laboratory at 2.5–10.0 min, and analyzed for resveratrol content in HPLC-MS/MS. As a result, the resveratrol in the rhizomes significantly decreased in a time-dependent manner following MV exposure.
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- 2024
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25. Correction: Antimicrobial and prebiotic activity of mannoproteins isolated from conventional and nonconventional yeast species—the study on selected microorganisms
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Anna, Bzducha-Wróbel, Pavol, Farkaš, Paulina, Chraniuk, Dominika, Popielarz, Alicja, Synowiec, Katarzyna, Pobiega, and Monika, Janowicz
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- 2023
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26. Temporal trajectories of normal myelination and axonal development assessed by quantitative macromolecular and diffusion MRI: Ultrastructural and immunochemical validation in a rabbit model
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Alexander Drobyshevsky, Sylvia Synowiec, Ivan Goussakov, Jing Lu, David Gascoigne, Daniil P Aksenov, and Vasily Yarnykh
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Brain development ,Myelin ,Tissue microstructure ,Macromolecular proton fraction ,G-ratio ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Introduction: Quantitative and non-invasive measures of brain myelination and maturation during development are of great importance to both clinical and translational research communities. While the metrics derived from diffusion tensor imaging, are sensitive to developmental changes and some pathologies, they remain difficult to relate to the actual microstructure of the brain tissue. The advent of advanced model-based microstructural metrics requires histological validation. The purpose of the study was to validate novel, model-based MRI techniques, such as macromolecular proton fraction mapping (MPF) and neurite orientation and dispersion indexing (NODDI), against histologically derived indexes of myelination and microstructural maturation at various stages of development. Methods: New Zealand White rabbit kits underwent serial in-vivo MRI examination at postnatal days 1, 5, 11, 18, and 25, and as adults. Multi-shell, diffusion-weighted experiments were processed to fit NODDI model to obtain estimates, intracellular volume fraction (ICVF) and orientation dispersion index (ODI). Macromolecular proton fraction (MPF) maps were obtained from three source (MT-, PD-, and T1-weighted) images. After MRI sessions, a subset of animals was euthanized and regional samples of gray and white matter were taken for western blot analysis, to determine myelin basic protein (MBP), and electron microscopy, to estimate axonal, myelin fractions and g-ratio. Results: MPF of white matter regions showed a period of fast growth between P5 and P11 in the internal capsule, with a later onset in the corpus callosum. This MPF trajectory was in agreement with levels of myelination in the corresponding brain region, as assessed by western blot and electron microscopy. In the cortex, the greatest increase of MPF occurred between P18 and P26. In contrast, myelin, according to MBP western blot, saw the largest hike between P5 and P11 in the sensorimotor cortex and between P11 and P18 in the frontal cortex, which then seemingly plateaued after P11 and P18 respectively.G-ratio by MRI markers decreased with age in the white matter. However, electron microscopy suggest a relatively stable g-ratio throughout development. Conclusion: Developmental trajectories of MPF accurately reflected regional differences of myelination rate in different cortical regions and white matter tracts. MRI-derived estimation of g-ratio was inaccurate during early development, likely due to the overestimation of axonal volume fraction by NODDI due to the presence of a large proportion of unmyelinated axons.
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- 2023
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27. Evaluation of the Efficacy of UV-C Radiation in Eliminating Microorganisms of Special Epidemiological Importance from Touch Surfaces under Laboratory Conditions and in the Hospital Environment
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Anna Różańska, Monika Walkowicz, Małgorzata Bulanda, Tomasz Kasperski, Edyta Synowiec, Piotr Osuch, and Agnieszka Chmielarczyk
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infection control ,UV-C disinfection ,ESKAPE ,Candida auris ,Medicine - Abstract
Introduction: Healthcare-associated infections in the post-pandemic era are as important as they were before COVID-19. The dominant route of transmission of microorganisms in health care units is the contact route, for which hand hygiene is of cardinal importance, but also effective disinfection of touch surfaces. Traditional disinfection based on chemical compounds is sensitive to human errors. Therefore, a valuable supplement to it can be contactless disinfection methods, including the use of UV-C. The aim of the study was to assess the effectiveness of UV-C radiation in eliminating selected, most important pathogens of particular epidemic importance from surfaces made of various materials: stainless steel, plastic and glass, most often found in hospital conditions. Material and Method: In laboratory conditions, the study was conducted using bacterial strains of great epidemiological importance and Candida auris. In hospital wards, samples were taken before and after disinfection for comparisons of the composition and quantity of bacteria. In laboratory conditions, carriers made of steel, plastic and glass were contaminated with a bacterial suspension with a density of approx. 0.5 McFarland, and then the density of persistent microorganisms was assessed after 10 min of UV-C irradiation. Results: The high effectiveness of UV-C radiation in eliminating bacteria contaminating touch surfaces in hospital wards and in laboratory conditions has been confirmed. The elimination efficiency in laboratory conditions was slightly lower (statistically insignificant) on the plastic surface, which is probably related to subtle differences in the thickness of the contaminating layer. Hydrophobic properties and the smallest suspension diameter were confirmed for the tested plastic carriers. Conclusions: UV-C disinfection is a desirable element to support traditional, chemical methods of disinfection in hospital conditions, effective against multidrug-resistant bacteria and C. auris.
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- 2023
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28. Condition of Young Japanese Knotweed (Reynoutria japonica Houtt.) Offshoots in Response to Microwave Radiation of Their Rhizomes
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Beata Grygierzec, Krzysztof Słowiński, Stanisław Mazur, Sylwester Tabor, Angelika Kliszcz, Agnieszka Synowiec, Dariusz Roman Ropek, and Lidia Luty
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microwave control ,growth ,spectrophotometric indices ,threshold ,Agriculture - Abstract
Invasive Japanese knotweed is one of Poland’s most aggressive and difficult-to-control species. New methods of control are of utmost importance. This study aimed to analyze young knotweed offshoots’ regeneration and physiological condition after treatment of their rhizomes with microwaves of high frequency. The fresh rhizomes were microwaved in the laboratory once for different times (from 5 to 60 s, interval 5 s). Next, in the greenhouse, the growth of offshoots and their biochemical state (spectrophotometry of leaves) were recorded in three measurement series. It was shown that the microwave treatment for 35 s directly destroys knotweed rhizomes of a diameter of 1–3 cm, so it does not produce new offsprings. The treatment times from 5–25 s delay offspring regeneration and growth and development of leaves. The leaves initiate the mechanisms of protection against microwave stress in offshoots grown from the rhizomes exposed to microwaves for 10 s (increase in the anthocyanin index) and the 5 or 20 s treatments (higher values of the photochemical reflectance index). Based on the effective dose (ED50) analysis, the threshold of harmful effects of microwaves on the growth and development of Reynoutria japonica rhizomes was assumed to be 17–19 s.
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- 2023
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29. The Thermal Properties and Nutritional Value of Biomass of Oleaginous Yeast Rhodotorula sp. during Glucose Fed-Batch Cultivation in Medium with Waste Nitrogen
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Iwona Gientka, Ewa Ostrowska-Ligęza, Magdalena Wirkowska-Wojdyła, and Alicja Synowiec
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yeast biomass ,DSC ,lipid ,fatty acids ,protein ,amino acids composition ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The biotechnological processing of oleaginous yeast biomass should be comprehensively managed using the zero-waste policy. This study focused on the biomass of the red yeast Rhodotorula obtained from a medium containing waste nitrogen. The cells accumulate lipids in intracellular lipid droplets; however, they are also rich in protein. Therefore, the nutritional value of lipid and protein, according to their fatty acid and amino acid composition, is a necessary step for practical application. For the very first time, this study focused on understanding the influence of temperature on powdered red yeast biomass to study components phase transition or chemical reactions by using DSC. Rhodotorula glutinis var. rubescens was cultivated in a glucose fed-batch in a potato wastewater medium, where the biomass yield was powdered, and lipid and fatty acid, protein, and amino acid compositions were determined. The DSC diagrams of red yeast biomass were characterized by two small and mild endothermic peaks, indicating the presence of fat and the presence of low molecular weight carbohydrates and a distinct peak associated with the presence of crystalline sugars. The nutritional quality of the lipid fraction as atherogenicity (0.223), thrombogenicity index (0.438), PUFA/SFA (0.24), and the n-6/n-3 ratio (3.275) was adequate for the recommendation and resulted from the fatty acid composition. The yeast protein was characterized by a high content of glutamic acid (99 mg/1 g of protein), and a value of essential amino acid index of protein suggested a superior amino acid composition compared to the FAO/WHO standard. Despite a high essential amino acid index (>120), yeast protein was characterized by a low content of Lys or Met.
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- 2023
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30. The effect of a static magnetic field and baicalin or baicalein interactions on amelanotic melanoma cell cultures (C32)
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Synowiec-Wojtarowicz, Agnieszka, Pawłowska-Góral, Katarzyna, Krawczyk, Agata, Gawron, Stanisław, and Kimsa-Dudek, Magdalena
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- 2022
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31. Variation of genes encoding nitric oxide synthases and antioxidant enzymes as potential risks of multiple sclerosis development: a preliminary study
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Paulina Wigner, Angela Dziedzic, Ewelina Synowiec, Elzbieta Miller, Michal Bijak, and Joanna Saluk-Bijak
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Medicine ,Science - Abstract
Abstract Multiple sclerosis (MS) is a neurodegenerative disease characterized by a variable clinical course and diverse pathophysiology, including nitrative and oxidative stresses as well as inflammation. We aimed to detect the potential association between five selected single-nucleotide polymorphisms (SNPs) in genes encoding nitric oxide synthetases as well as antioxidant enzymes and the development of MS in a Polish population. Genomic DNA was isolated from peripheral blood collected from 142 MS patients and 140 controls. Using Taq-Man® probes, we genotyped the following SNPs: rs1879417 in NOS1, and rs2297518 in NOS2 as well as rs4880 in SOD2, rs7943316 in CAT, rs713041 in GPX4. In the case of rs2297518, the C/C genotype and C allele SNP were associated with an enhanced occurrence of MS, while the C/T, T/T genotypes, and T allele of the same polymorphism reduced this risk. Moreover, the C/C homozygote and C allele of the rs4880 SNP reduced MS risk, while the T allele increased the risk. In addition, the A/T heterozygote of rs7943316 polymorphism was associated with an increased risk of MS occurrence. We also detected that the C/C genotype and C allele of rs713041 decreased the risk of MS, whereas the T/T genotype and T allele increased this risk. In conclusion, the results of our study suggest some links between polymorphic variability in the nitrative/oxidative stress-related genes and the risk of MS development in the Polish population.
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- 2022
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32. Intra- and interspecies competition of blackgrass and wheat in the context of herbicidal resistance and environmental conditions in Poland
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Anna Wenda-Piesik, Agnieszka Synowiec, Katarzyna Marcinkowska, Barbara Wrzesińska, Cezary Podsiadło, Krzysztof Domaradzki, Piotr Kuc, and Ewa Kwiecińska-Poppe
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Medicine ,Science - Abstract
Abstract Blackgrass (Alopecurus myosuroides Huds.), one of the most aggressive grass weeds in Europe, is also a strong competitor of crops. This study aimed to assess the impact of environmental conditions on the competition between (1) ACC-ase and ALS herbicide-resistant (BR) and herbicide-susceptible (BS) blackgrass biotypes, (2) BR and winter wheat cv. Arkadia (W), and (3) BS and W. In the replacement series model, the experiment was conducted at seven sites across Poland during two seasons (2018/19 and 2019/20). In the BR-BS experiment, the BS biotype was in majority more competitive toward the BR biotype. However, in the regime of optimal hydrothermal conditions and at a higher sand content in the soil we observed a higher competitiveness of BR towards BS. The combined interactions between W and BR or BS were also affected by environmental conditions, i.e., soil texture and hydrothermal coefficient, as explained by PCA and k-means cluster analysis. At most sites, W was more competitive toward both BS and BR, which could result from earlier emergence of W in relation to B in majority of sites. Except for two cases, located on heavy, clay soils, during humid seasons, where B was more competitive toward W. We summarize that blackgrass competitiveness towards other biotypes and wheat depends to some extent on environmental conditions; however, the phenomenon should be explored in more detail.
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- 2022
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33. Intra- and interspecies competition of blackgrass and wheat in the context of herbicidal resistance and environmental conditions in Poland
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Wenda-Piesik, Anna, Synowiec, Agnieszka, Marcinkowska, Katarzyna, Wrzesińska, Barbara, Podsiadło, Cezary, Domaradzki, Krzysztof, Kuc, Piotr, and Kwiecińska-Poppe, Ewa
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- 2022
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34. Variation of genes encoding nitric oxide synthases and antioxidant enzymes as potential risks of multiple sclerosis development: a preliminary study
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Wigner, Paulina, Dziedzic, Angela, Synowiec, Ewelina, Miller, Elzbieta, Bijak, Michal, and Saluk-Bijak, Joanna
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- 2022
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35. Antimicrobial and prebiotic activity of mannoproteins isolated from conventional and nonconventional yeast species—the study on selected microorganisms
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Anna, Bzducha-Wróbel, Pavol, Farkaš, Paulina, Chraniuk, Dominika, Popielarz, Alicja, Synowiec, Katarzyna, Pobiega, and Monika, Janowicz
- Published
- 2022
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36. Determinants of chronic disease acceptance
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Iwona Oskędra, Natalia Synowiec, and Katarzyna Wojtas
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surgical site infections ,surgical site infection prevention ,orthopaedics ,perioperative care. ,Nursing ,RT1-120 - Published
- 2022
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37. DNA Damage Induced by T-2 Mycotoxin in Human Skin Fibroblast Cell Line—Hs68
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Edyta Janik-Karpinska, Michal Ceremuga, Marcin Niemcewicz, Ewelina Synowiec, Tomasz Sliwinski, Maksymilian Stela, and Michal Bijak
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T-2 toxin ,skin ,Hs68 cell line ,genotoxicity ,DNA ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
T-2 mycotoxin is the most potent representative of the trichothecene group A and is produced by various Fusarium species, including F. sporotrichioides, F. poae, and F. acuminatum. T-2 toxin has been reported to have toxic effects on various tissues and organs, and humans and animals alike suffer a variety of pathological conditions after consumption of mycotoxin-contaminated food. The T-2 toxin’s unique feature is dermal toxicity, characterized by skin inflammation. In this in vitro study, we investigated the molecular mechanism of T-2 toxin-induced genotoxicity in the human skin fibroblast—Hs68 cell line. For the purpose of investigation, the cells were treated with T-2 toxin in 0.1, 1, and 10 μM concentrations and incubated for 24 h and 48 h. Nuclear DNA (nDNA) is found within the nucleus of eukaryotic cells and has a double-helix structure. nDNA encodes the primary structure of proteins, consisting of the basic amino acid sequence. The alkaline comet assay results showed that T-2 toxin induces DNA alkali-labile sites. The DNA strand breaks in cells, and the DNA damage level is correlated with the increasing concentration and time of exposure to T-2 toxin. The evaluation of nDNA damage revealed that exposure to toxin resulted in an increasing lesion frequency in Hs68 cells with HPRT1 and TP53 genes. Further analyses were focused on mRNA expression changes in two groups of genes involved in the inflammatory and repair processes. The level of mRNA increased for all examined inflammatory genes (TNF, INFG, IL1A, and IL1B). In the second group of genes related to the repair process, changes in expression induced by toxin in genes—LIG3 and APEX were observed. The level of mRNA for LIG3 decreased, while that for APEX increased. In the case of LIG1, FEN, and XRCC1, no changes in mRNA level between the control and T-2 toxin probes were observed. In conclusion, the results of this study indicate that T-2 toxin shows genotoxic effects on Hs68 cells, and the molecular mechanism of this toxic effect is related to nDNA damage.
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- 2023
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38. Single-Nucleotide Polymorphisms in Genes Maintaining the Stability of Mitochondrial DNA Affect the Occurrence, Onset, Severity and Treatment of Major Depressive Disorder
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Piotr Czarny, Sylwia Ziółkowska, Łukasz Kołodziej, Cezary Watała, Paulina Wigner-Jeziorska, Katarzyna Bliźniewska-Kowalska, Katarzyna Wachowska, Małgorzata Gałecka, Ewelina Synowiec, Piotr Gałecki, Michał Bijak, Janusz Szemraj, and Tomasz Śliwiński
- Subjects
oxidative stress ,depression ,DNA repair ,DNA damage ,mitochondrial DNA ,gene polymorphism ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
One of the key features of major depressive disorder (MDD, depression) is increased oxidative stress manifested by elevated levels of mtROS, a hallmark of mitochondrial dysfunction, which can arise from mitochondrial DNA (mtDNA) damage. Thus, the current study explores possibility that the single-nucleotide polymorphisms (SNPs) of genes encoding the three enzymes that are thought to be implicated in the replication, repair or degradation of mtDNA, i.e., POLG, ENDOG and EXOG, have an impact on the occurrence, onset, severity and treatment of MDD. Five SNPs were selected: EXOG c.-188T > G (rs9838614), EXOG c.*627G > A (rs1065800), POLG c.-1370T > A (rs1054875), ENDOG c.-394T > C (rs2977998) and ENDOG c.-220C > T (rs2997922), while genotyping was performed on 538 DNA samples (277 cases and 261 controls) using TaqMan probes. All SNPs of EXOG and ENDOG modulated the risk of depression, but the strongest effect was observed for rs1065800, while rs9838614 and rs2977998 indicate that they might influence the severity of symptoms, and, to a lesser extent, treatment effectiveness. Although the SNP located in POLG did not affect occurrence of the disease, the result suggests that it may influence the onset and treatment outcome. These findings further support the hypothesis that mtDNA damage and impairment in its metabolism play a crucial role not only in the development, but also in the treatment of depression.
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- 2023
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39. Comparison of the Chemical Composition and Antioxidant Properties of Propolis from Urban Apiaries
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Katarzyna Pobiega, Anna M. Kot, Jarosław L. Przybył, Alicja Synowiec, and Małgorzata Gniewosz
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propolis ,urban apiares ,antioxidants ,chemical composition ,Organic chemistry ,QD241-441 - Abstract
Bee products from urban apiaries are increasingly used. They are mainly used to promote local apiaries and cities in which they are located. The aim of the study was to compare the chemical composition and antioxidant activity of propolis from 6 Polish apiaries located in cities (Legionowo, Torun, Cracow, Warsaw, Katowice, Lodz). The chemical composition was analyzed using liquid chromatography (HPLC-DAD) and the analysis of antioxidant activity by scavenging free radicals (ABTS and DPPH) and FRAP. The obtained results showed the presence of 24 phenolic compounds in propolis extracts. The tested samples showed differentiation in terms of the content of individual chemical components, however, cinnamic acid and its derivatives were dominant. High antioxidant activity of the tested extracts was demonstrated (ABTS was in the range of 16.80–51.53 mg Te/mL, DPPH was in the range of 7.54–22.13 mg Te/mL, while FRAP reduction was in the range of 10.93–29.55 mg Te/mL). The obtained results compared with literature data on propolis from agricultural areas allow to conclude that propolis samples from both Poland types of areas are similar and can be classified as poplar propolis.
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- 2023
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40. Magnesium Binding by Cyberlindnera jadinii Yeast in Media from Potato Wastewater and Glycerol
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Anna M. Kot, Stanisław Błażejak, Klaudia Nosek, Alicja Synowiec, Anna Chlebowska-Śmigiel, and Katarzyna Pobiega
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fodder yeasts ,potato wastewater ,glycerol ,magnesium ,Biology (General) ,QH301-705.5 - Abstract
The aim of this study was to determine the magnesium-binding capacity of Cyberlindnera jadinii yeast in media prepared from potato wastewater and glycerol (after biodiesel production), supplemented with magnesium salt. The research was carried out in two stages. In the first, the ability to binding magnesium by yeast in media supplemented with various doses of this element was tested. In the second stage, after selecting the appropriate dose of magnesium, the culture was carried out in a bioreactor. The composition of the yeast biomass was also analysed in terms of lipids and protein content and amino acid composition. Studies have shown that this type of medium can be used as a culture medium for the growth of C. jadinii yeast. In the first stage of the study, the most magnesium (8.97 mg/gd.m.) was bound by yeast cells after 48 h of cultivation in a medium supplemented with the addition of magnesium at a dose of 2 g/L. In the second stage of the research, the highest magnesium content in the biomass (7.9 mg/gd.m.) was noted after 24 h of cultivation in the same medium. The lipid and protein contents in the biomass obtained after 24 h of cultivation in the bioreactor were 6.35 and 43.73%, respectively. The main fatty acids present in the yeast lipids were oleic acid (59.4%) and linoleic acid (8.6%). Analysis of the amino acid profile of the proteins showed the highest proportions were glutamic acid (13.7%) and aspartic acid (11%).
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- 2023
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41. The Effect of Resveratrol and Static Magnetic Field Interactions on the Oxidation–Reduction Parameters of Melanoma Malignant Cells
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Agnieszka Synowiec-Wojtarowicz, Agata Krawczyk, and Magdalena Kimsa-Dudek
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resveratrol ,static magnetic fields ,C32 cells ,Colo829 cells ,anticancer properties ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Background: Scientific research has confirmed the biological activity of resveratrol, which includes its antioxidant, anti-inflammatory, cardioprotective and anticancer properties. There is no known interaction between a static magnetic field and resveratrol that can modulate resveratrol’s effect on cells. Thus, the main aim of our research was to assess the effect of the co-exposure to resveratrol and a static magnetic field on the oxidation–reduction homeostasis of C32 and Colo829 melanoma cells. Methods: The studies consisted of determining the activity of the antioxidant enzymes that constitute the body’s first line of defense—SOD, GPx and CAT—and determining the lipid peroxidation product—MDA—and the value of the total antioxidant status of melanoma cells. Results and conclusions: Resveratrol was shown to exhibit anticancer properties, possibly through the ferroptosis of melanoma cells. A static magnetic field was also found to abolish the anticancer properties of resveratrol and to have a protective effect against melanoma cells by restoring the redox balance in the cells.
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- 2023
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42. Sulfidation of Ceramic-Based Coatings Deposited on Low-Alloyed Steel 16Mo3 Exposed at High Temperature
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Rząd, Ewa, Dudziak, Tomasz, Polczyk, Tomasz, Boroń, Łukasz, Figiel, Paweł, Oziębło, Artur, Chmielewska, Danuta, Synowiec, Barbara, and Pichniarczyk, Paweł
- Published
- 2021
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43. Palbociclib in combination with aromatase inhibitors in patients ≥ 75 years with oestrogen receptor-positive, human epidermal growth factor receptor 2 negative advanced breast cancer: A real-world multicentre UK study
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Salma El Badri, Bilal Tahir, Kirsty Balachandran, Pavel Bezecny, Fiona Britton, Mark Davies, Karen Desouza, Simon Dixon, Daniel Hills, Maung Moe, Thomas Pigott, Andrew Proctor, Yatri Shah, Richard Simcock, Anna Stansfeld, Alicja Synowiec, Marianna Theodoulou, Mark Verrill, Anshu Wadhawan, Catherine Harper-Wynne, and Caroline Wilson
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Palbociclib ,Breast cancer ,Real-world ,Frail elderly ,Toxicity ,Treatment efficacy ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Breast cancer incidence increases with age and real-world data is essential to guide prescribing practices in the older population. The aim of this study was to collect large scale real-world data on tolerability and efficacy of palbociclib + AI in the first line treatment of ER+/HER2-advanced breast cancer in those aged ≥75 years. Methods: 14 cancer centres participated in this national UK retrospective study. Patients aged ≥75 years treated with palbociclib + AI in the first line setting were identified. Data included baseline demographics, disease characteristics, toxicities, dose reductions and delays, treatment response and survival data. Multivariable Cox regression was used to assess independent predictors of PFS, OS and toxicities. Results: 276 patients met the eligibility criteria. The incidence of febrile neutropenia was low (2.2%). The clinical benefit rate was 87%. 50.7% of patients had dose reductions and 59.3% had dose delays. The 12- and 24- month PFS rates were 75.9% and 64.9%, respectively. The 12- and 24- month OS rates were 85.1% and 74.0%, respectively. Multivariable analysis identified PS, Age-adjusted Charlson Comorbidity Index (ACCI) and number of metastatic sites to be independent predictors of PFS. Dose reductions and delays were not associated with adverse survival outcomes. Baseline ACCI was an independent predictor of development and severity of neutropenia. Conclusion: Palbociclib is an effective therapy in the real-world older population and is well-tolerated with low levels of clinically significant toxicities. The use of geriatric and frailty assessments can help guide decision making in these patients.
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- 2021
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44. Kształtowanie się ogólnopolskiej placówki naukowo-badawczej przemysłu tytoniowego – powstanie Centralnego Laboratorium Przemysłu Tytoniowego
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Andrzej Synowiec
- Subjects
History (General) and history of Europe - Abstract
Formation of a nationwide research and development facility for the tobacco industry – establishment of the Central Tobacco Industry Laboratory The text presents the establishment circumstances of the first nationwide research and development institution for the tobacco industry. The need to create such an institution dealing with workings of the broadly understood tobacco industry was felt from the beginning of tobacco cultivation in Poland, and especially after the regaining of the independence. After World War II, the matter became even more urgent due to the fact that the cultivation of tobacco was of great importance for the Polish economy and the consumption of tobacco products was constantly growing. It is difficult to talk about a modern tobacco industry without a specialized research and development facility with qualified personnel of scientists and appropriate laboratories. Long-term discussions as to the form and manner of organization of said facility were crowned with the establishment of the Central Scientific and Research Institute of the Tobacco Industry in 1951. It was intended to then later be replaced with the Tobacco Industry Institute, but instead, the Tobacco Industry Research and Control Laboratory was first established in 1954 and in 1956 it was transformed into the Central Tobacco Industry Laboratory with its seat first in Warsaw and then in Cracow-Czyżyny (until 2004).
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- 2021
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45. Lower Silesian Factory of Nicotine Preparations
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Andrzej Synowiec
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tobacco industry ,Lower Silesian Nicotine Preparations Factory ,Szalejów Dolny ,Góra Śląska ,nicotine sulphate ,plant protection ,Economic history and conditions ,HC10-1085 ,Finance ,HG1-9999 - Abstract
The state-owned enterprise under the name of Lower Silesian Factory of Nicotine Preparations (Dolnośląska Wytwórnia Preparatów Nikotynowych; DWPN) with its registered office first in Szalejów Dolny and then in Góra Śląska existed in the years 1952–1958. It produced, above all, nicotine sulphate used by farmers for plant protection (primarily to combat extremely widespread aphids). The plant was managed by the Polish tobacco industry, which supplied the raw material in the form of tobacco waste and waste from tobacco plants. The article first presents the post-war demand of Polish agriculture for nicotine preparations and the plans of the tobacco industry to concentrate their production in one place. Initially, nicotine preparations were manufactured in plants in Szalejów Dolny, Góra Śląska and Kraków-Czyżyny. Finally, under the auspices of the tobacco industry, the DWPN company was established, which produced nicotine preparations for the entire Polish agriculture. DWPN produced approximately 40 tons of nicotine sulphate annually. The plant employed an average of 60–70 employees. Economic reasons and a reduction in the demand for nicotine sulphate resulting from the appearance of cheaper and equally effective insecticides on the market made it necessary to liquidate the plant. The company’s facilities were taken over by the Provincial Union of Enterprises of State Industry in Wrocław.
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- 2022
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46. Oculomotor, vestibular, reaction time, and cognitive tests as objective measures of neural deficits in patients post COVID-19 infection
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Kevin M. Kelly, R. Anghinah, A. Kullmann, R. C. Ashmore, A. S. Synowiec, L. C. Gibson, L. Manfrinati, A. de Araújo, R. R. Spera, S. M. D. Brucki, R. L. Tuma, A. Braverman, and A. Kiderman
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oculomotor ,COVID-19 ,biomarker ,eye-tracking ,Neurobehavioral Symptom Inventory (NSI) ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
ObjectiveAn alarming proportion (>30%) of patients affected by SARS-CoV-2 (COVID-19) continue to experience neurological symptoms, including headache, dizziness, smell and/or taste abnormalities, and impaired consciousness (brain fog), after recovery from the acute infection. These symptoms are self-reported and vary from patient to patient, making it difficult to accurately diagnose and initiate a proper treatment course. Objective measures to identify and quantify neural deficits underlying the symptom profiles are lacking. This study tested the hypothesis that oculomotor, vestibular, reaction time, and cognitive (OVRT-C) testing using eye-tracking can objectively identify and measure functional neural deficits post COVID-19 infection.MethodsSubjects diagnosed with COVID-19 (n = 77) were tested post-infection with a battery of 20 OVRT-C tests delivered on a portable eye-tracking device (Neurolign Dx100). Data from 14 tests were compared to previously collected normative data from subjects with similar demographics. Post-COVID subjects were also administered the Neurobehavioral Symptom Inventory (NSI) for symptom evaluation.ResultsA significant percentage of post COVID-19 patients (up to 86%) scored outside the norms in 12 out of 14 tests, with smooth pursuit and optokinetic responses being most severely affected. A multivariate model constructed using stepwise logistic regression identified 6 metrics as significant indicators of post-COVID patients. The area under the receiver operating characteristic curve (AUC) was 0.89, the estimated specificity was 98% (with cutoff value of 0.5) and the sensitivity was 88%. There were moderate but significant correlations between NSI domain key variables and OVRT-C tests.ConclusionsThis study demonstrates the feasibility of OVRT-C testing to provide objective measures of neural deficits in people recovering from COVID-19 infection. Such testing may serve as an efficient tool for identifying hidden neurological deficits post COVID-19, screening patients at risk of developing long COVID, and may help guide rehabilitation and treatment strategies.
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- 2022
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47. Chitosan Nanoparticles-Preparation, Characterization and Their Combination with Ginkgo biloba Extract in Preliminary In Vitro Studies
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Monika Owczarek, Lucyna Herczyńska, Przemysław Sitarek, Tomasz Kowalczyk, Ewelina Synowiec, Tomasz Śliwiński, and Izabella Krucińska
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chitosan nanoparticles ,Ginkgo biloba extract ,drug release ,cytotoxicity ,Organic chemistry ,QD241-441 - Abstract
Nanoparticles (NPs), due to their size, have a key position in nanotechnology as a spectrum of solutions in medicine. NPs improve the ability of active substances to penetrate various routes: transdermal, but also digestive (active endocytosis), respiratory and injection. Chitosan, an N-deacetylated derivative of chitin, is a natural biodegradable cationic polymer with antioxidant, anti-inflammatory and antimicrobial properties. Cross-linked chitosan is an excellent matrix for the production of nanoparticles containing active substances, e.g., the Ginkgo biloba extract (GBE). Chitosan nanoparticles with the Ginkgo biloba extract (GBE) were obtained by ion gelation using TPP as a cross-linking agent. The obtained product was characterized in terms of morphology and size based on SEM and Zeta Sizer analyses as well as an effective encapsulation of GBE in nanoparticles—FTIR-ATR and UV-Vis analyses. The kinetics of release of the active substance in water and physiological saline were checked. Biological studies were carried out on normal and cancer cell lines to check the cytotoxic effect of GBE, chitosan nanoparticles and a combination of the chitosan nanoparticles with GBE. The obtained nanoparticles contained and released GBE encapsulated in research media. Pure NPs, GBE and a combination of NPs and the extract showed cytotoxicity against tumor cells, with no cytotoxicity against the physiological cell line.
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- 2023
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48. Experimental Determination Influence of Flow Disturbances behind the Knife Gate Valve on the Indications of the Ultrasonic Flow Meter with Clamp-On Sensors on Pipelines
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Piotr Piechota, Piotr Synowiec, Artur Andruszkiewicz, Wiesław Wędrychowicz, Elżbieta Wróblewska, and Andrzej Mrowiec
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ultrasonic flow meter ,clamp-on ,flow disturbance ,correction factor measurement error ,knife gate valve ,laser doppler anemometry ,Chemical technology ,TP1-1185 - Abstract
The aim of this work is to experimentally determine and evaluate the value of the correction factor for ultrasonic flow meters in order to improve their accuracy. This article concerns flow velocity measurement with the use of an ultrasonic flow meter in the area of disturbed flow behind the distorting element. Clamp-on ultrasonic flow meters are popular among measurement technologies due to their high accuracy and easy, non-invasive installation, because the sensors are mounted directly on the outer surface of the pipe. In industrial applications, installation space is usually limited and, therefore, flow meters frequently have to be mounted directly behind flow disturbances. In such cases, it is necessary to determine the value of the correction factor. The disturbing element was a knife gate valve, a valve often used in flow installations. Water flow velocity tests were performed using an ultrasonic flow meter with clamp-on sensors on the pipeline. The research was performed in 2 series of measurements with different Reynolds numbers of 35,000 and 70,000, which correspond to a velocity of approximately 0.9 m/s and 1.8 m/s. The tests were carried out at different distances from the source of interference, within the range of 3–15 DN (pipe nominal diameter). The position of the sensors at successive measurement points on the circuit of the pipeline was changed by 30 degrees. Flow velocity measurements were carried out for two different levels of the valve’s closure: 1/3 and 1/2 of the valve’s height. For the collected velocity values at single measurement points, the values of the correction coefficient, K, were determined. The results of the tests and calculations prove that compensation error of measurement performed behind the disturbance without keeping the required straight sections of the pipeline is possible by using the factor K*. The analysis of the results made it possible to identify the optimal measuring point at a distance from the knife gate valve as being smaller than specified in the standards and recommendations.
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- 2023
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49. Changes in Physical and Chemical Parameters of Beetroot and Carrot Juices Obtained by Lactic Fermentation
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Emilia Janiszewska-Turak, Katarzyna Pobiega, Katarzyna Rybak, Alicja Synowiec, Łukasz Woźniak, Urszula Trych, Małgorzata Gniewosz, and Dorota Witrowa-Rajchert
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beetroot ,carrot ,juice ,lactic acid fermentation ,carotenoids ,betalain ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Fermented foods have gained popularity recently, especially lactofermented vegetable juice products that provide a rich source of nutrients. This study analyzed the properties of fermented beetroot, carrot and beetroot-carrot juices fermented with bacterial strains Lactiplantibacillus plantarum or Levilactobacillus brevis. Density, extract, dry matter content, pH, total acidity, pigments (betalain or carotenoids), color and LAB count were measured. The results showed that the LAB strains used were capable of fermenting the analyzed juices. It was proven that Lactiplantibacillus plantarum was the better strain for fermentation of vegetable juice. This might have been influenced by the fermentation temperature and the duration time. The highest number of lactic acid bacteria was observed for carrot juice fermented with L. brevis on the 4th day (9.41 log CFU/mL), while for L. plantarum the highest numbers were observed on the 5th–6th day (8.9–9.1 log CFU/mL). For beetroot and its mixture with carrot juices, higher results were observed on the 5th day for L. plantarum (9.0 and 8.3 log CFU/mL, respectively). In most variants of this process, fermentation can be completed after 4–5 days. During the fermentation of carrot and mixed juice slow degradation of carotenoids was observed, while in mixed juice an increase of red pigment (betanin) was observed. In beetroot juices huge degradation was observed for fermentation with L. brevis, while the second bacteria kept the same level of red pigment almost until the last day, while yellow decreased from the 3rd day. It can be concluded that the mixed juice was most stable according to the bacteria count and the pigment content. In our opinion, L. plantarum was better for the fermentation of juices than L. brevis. However, in future tests the time of fermentation can be shortened to 5 days and other LAB strains can be tested.
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- 2023
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50. An effect of positional isomerism of benzoic acid derivatives on antibacterial activity against Escherichia coli
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Synowiec Alicja, Żyła Kinga, Gniewosz Małgorzata, and Kieliszek Marek
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benzoic acid derivatives ,positional isomerism ,antibacterial activity ,e. coli ,Biology (General) ,QH301-705.5 - Abstract
This study demonstrated the effect of positional isomerism of benzoic acid derivatives against E. coli ATCC 700728 with the serotype O157. The addition of hydroxyl and methoxyl substituents weakened the effect of acids against E. coli with respect to benzoic acid (except 2-hydroxybenzoic). The connection of the hydroxyl group at the second carbon atom in the benzoic ring reduced the time needed to kill bacterial cells. Phenolic acids with methoxyl substitutes limited the biofilm formation by E. coli to a greater extent than hydroxyl derivatives. The most significant influence on the antibacterial activity of phenolic acids has the type of substituent attached to the benzoic ring, their number, and finally the number of carbon atoms at which the functional group is located.
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- 2021
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