373 results on '"P. Loane"'
Search Results
2. Bi-directional neuro-immune dysfunction after chronic experimental brain injury
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Ritzel, Rodney M., Li, Yun, Jiao, Yun, Doran, Sarah J., Khan, Niaz, Henry, Rebecca J., Brunner, Kavitha, Loane, David J., Faden, Alan I., Szeto, Gregory L., and Wu, Junfang
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- 2024
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3. The Association of Prenatal Diagnoses with Mortality and Long-Term Morbidity in Children with Specific Isolated Congenital Anomalies: A European Register-Based Cohort Study
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Heino, Anna, Morris, Joan K., Garne, Ester, Baldacci, Silvia, Barisic, Ingeborg, Cavero-Carbonell, Clara, García-Villodre, Laura, Given, Joanne, Jordan, Sue, Loane, Maria, Lutke, L. Renée, Neville, Amanda J., Santoro, Michele, Scanlon, Ieuan, Tan, Joachim, de Walle, Hermien E. K., Kiuru-Kuhlefelt, Sonja, and Gissler, Mika
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- 2024
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4. Medical Image Retrieval via Nearest Neighbor Search on Pre-trained Image Features
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Gupta, Deepak, Loane, Russell, Gayen, Soumya, and Demner-Fushman, Dina
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence - Abstract
Nearest neighbor search (NNS) aims to locate the points in high-dimensional space that is closest to the query point. The brute-force approach for finding the nearest neighbor becomes computationally infeasible when the number of points is large. The NNS has multiple applications in medicine, such as searching large medical imaging databases, disease classification, diagnosis, etc. With a focus on medical imaging, this paper proposes DenseLinkSearch an effective and efficient algorithm that searches and retrieves the relevant images from heterogeneous sources of medical images. Towards this, given a medical database, the proposed algorithm builds the index that consists of pre-computed links of each point in the database. The search algorithm utilizes the index to efficiently traverse the database in search of the nearest neighbor. We extensively tested the proposed NNS approach and compared the performance with state-of-the-art NNS approaches on benchmark datasets and our created medical image datasets. The proposed approach outperformed the existing approach in terms of retrieving accurate neighbors and retrieval speed. We also explore the role of medical image feature representation in content-based medical image retrieval tasks. We propose a Transformer-based feature representation technique that outperformed the existing pre-trained Transformer approach on CLEF 2011 medical image retrieval task. The source code of our experiments are available at https://github.com/deepaknlp/DLS.
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- 2022
5. Strategies for managing fungicide resistance in the Brazilian tropical agroecosystem: Safeguarding food safety, health, and the environmental quality
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Ceresini, Paulo Cezar, Silva, Tatiane Carla, Vicentini, Samara Nunes Campos, Júnior, Rui Pereira Leite, Moreira, Silvino Intra, Castro-Ríos, Katherin, Garcés-Fiallos, Felipe Rafael, Krug, Loane Dantas, de Moura, Suzany Santos, da Silva, Abimael Gomes, de Paiva Custódio, Adriano Augusto, May De Mio, Louise Larissa, de Godoy Gasparoto, Maria Cândida, Portalanza, Diego, and de Jesus Júnior, Waldir Cintra
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- 2024
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6. Alpha-6 integrin deletion delays the formation of Brca1/p53-deficient basal-like breast tumors by restricting luminal progenitor cell expansion
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Marisa M. Faraldo, Mathilde Romagnoli, Loane Wallon, Pierre Dubus, Marie-Ange Deugnier, and Silvia Fre
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Brca1/p53-deficient tumors ,Luminal progenitors ,Laminin-binding integrins ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background The aberrant amplification of mammary luminal progenitors is at the origin of basal-like breast cancers associated with BRCA1 mutations. Integrins mediate cell–matrix adhesion and transmit mechanical and chemical signals that drive epithelial stem cell functions and regulate tumor progression, metastatic reactivation, and resistance to targeted therapies. Consistently, we have recently shown that laminin-binding integrins are essential for the expansion and differentiation of mammary luminal progenitors in physiological conditions. As over-expression of the laminin-binding α6 integrin (Itgα6) is associated with poor prognosis and reduced survival in breast cancer, we here investigate the role of Itgα6 in mammary tumorigenesis. Methods We used Blg-Cre; Brca1 F/F ; Trp53 F/F mice, a model that phenocopies human basal-like breast cancer with BRCA1 mutations. We generated mutant mice proficient or deficient in Itgα6 expression and followed tumor formation. Mammary tumors and pretumoral tissues were characterized by immunohistochemistry, flow cytometry, RT-qPCR, Western blotting and organoid cultures. Clonogenicity of luminal progenitors from preneoplastic glands was studied in 3D Matrigel cultures. Results We show that Itga6 deletion favors activation of p16 cell cycle inhibitor in the preneoplastic tissue. Subsequently, the amplification of luminal progenitors, the cell of origin of Brca1-deficient tumors, is restrained in Itgα6-deficient gland. In addition, the partial EMT program operating in Brca1/p53-deficient epithelium is attenuated in the absence of Itgα6. As a consequence of these events, mammary tumor formation is delayed in Itgα6-deficient mice. After tumor formation, the lack of Itgα6 does not affect tumor growth but rather alters their differentiation, resulting in reduced expression of basal cell markers. Conclusions Our data indicate that Itgα6 has a pro-tumorigenic role in Blg-Cre; Brca1 F/F ; Trp53 F/F mice developing basal-like mammary tumors. In particular, we reveal that Itgα6 is required for the luminal progenitor expansion and the aberrant partial EMT program that precedes the formation of BRCA1 deficient tumors.
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- 2024
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7. Bi-directional neuro-immune dysfunction after chronic experimental brain injury
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Rodney M. Ritzel, Yun Li, Yun Jiao, Sarah J. Doran, Niaz Khan, Rebecca J. Henry, Kavitha Brunner, David J. Loane, Alan I. Faden, Gregory L. Szeto, and Junfang Wu
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Traumatic brain injury ,Bone marrow transplantation ,Long-term reconstitution ,Hematopoiesis ,Innate immunity ,Neuroinflammation ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background It is well established that traumatic brain injury (TBI) causes acute and chronic alterations in systemic immune function and that systemic immune changes contribute to posttraumatic neuroinflammation and neurodegeneration. However, how TBI affects bone marrow (BM) hematopoietic stem/progenitor cells chronically and to what extent such changes may negatively impact innate immunity and neurological function has not been examined. Methods To further understand the role of BM cell derivatives on TBI outcome, we generated BM chimeric mice by transplanting BM from chronically injured or sham (i.e., 90 days post-surgery) congenic donor mice into otherwise healthy, age-matched, irradiated CD45.2 C57BL/6 (WT) hosts. Immune changes were evaluated by flow cytometry, multiplex ELISA, and NanoString technology. Moderate-to-severe TBI was induced by controlled cortical impact injury and neurological function was measured using a battery of behavioral tests. Results TBI induced chronic alterations in the transcriptome of BM lineage−c-Kit+Sca1+ (LSK+) cells in C57BL/6 mice, including modified epigenetic and senescence pathways. After 8 weeks of reconstitution, peripheral myeloid cells from TBI→WT mice showed significantly higher oxidative stress levels and reduced phagocytic activity. At eight months after reconstitution, TBI→WT chimeric mice were leukopenic, with continued alterations in phagocytosis and oxidative stress responses, as well as persistent neurological deficits. Gene expression analysis revealed BM-driven changes in neuroinflammation and neuropathology after 8 weeks and 8 months of reconstitution, respectively. Chimeric mice subjected to TBI at 8 weeks and 8 months post-reconstitution showed that longer reconstitution periods (i.e., time post-injury) were associated with increased microgliosis and leukocyte infiltration. Pre-treatment with a senolytic agent, ABT-263, significantly improved behavioral performance of aged C57BL/6 mice at baseline, although it did not attenuate neuroinflammation in the acutely injured brain. Conclusions TBI causes chronic activation and progressive dysfunction of the BM stem/progenitor cell pool, which drives long-term deficits in hematopoiesis, innate immunity, and neurological function, as well as altered sensitivity to subsequent brain injury.
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- 2024
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8. Detection of tool wear during machining by designing a novel 12-way 2-shot learning model by applying L2-regularization and image augmentation
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Mahmood, Jawad, Raja, Muhammad Adil, Rehman, Mudassar, Loane, John, and Zahoor, Sadaf
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- 2023
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9. Prescriptions for insulin and insulin analogues in children with and without major congenital anomalies: a data linkage cohort study across six European regions
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Given, Joanne, Morris, Joan K., Garne, Ester, Ballardini, Elisa, Barrachina-Bonet, Laia, Cavero-Carbonell, Clara, Gissler, Mika, Gorini, Francesca, Heino, Anna, Jordan, Sue, Neville, Amanda J., Pierini, Anna, Scanlon, Ieuan, Tan, Joachim, Urhoj, Stine K., and Loane, Maria
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- 2023
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10. The development of a core outcome set for studies of pregnant women with multimorbidity
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Siang Ing Lee, Stephanie Hanley, Zoe Vowles, Rachel Plachcinski, Ngawai Moss, Megha Singh, Chris Gale, Adeniyi Francis Fagbamigbe, Amaya Azcoaga-Lorenzo, Anuradhaa Subramanian, Beck Taylor, Catherine Nelson-Piercy, Christine Damase-Michel, Christopher Yau, Colin McCowan, Dermot O’Reilly, Gillian Santorelli, Helen Dolk, Holly Hope, Katherine Phillips, Kathryn M. Abel, Kelly-Ann Eastwood, Lisa Kent, Louise Locock, Maria Loane, Mohamed Mhereeg, Peter Brocklehurst, Sharon McCann, Sinead Brophy, Steven Wambua, Sudasing Pathirannehelage Buddhika Hemali Sudasinghe, Shakila Thangaratinam, Krishnarajah Nirantharakumar, Mairead Black, and on behalf of the MuM-PreDiCT Group
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Multimorbidity ,Multiple chronic conditions ,Multiple long-term conditions ,Pregnancy ,Maternity ,Outcome ,Medicine - Abstract
Abstract Background Heterogeneity in reported outcomes can limit the synthesis of research evidence. A core outcome set informs what outcomes are important and should be measured as a minimum in all future studies. We report the development of a core outcome set applicable to observational and interventional studies of pregnant women with multimorbidity. Methods We developed the core outcome set in four stages: (i) a systematic literature search, (ii) three focus groups with UK stakeholders, (iii) two rounds of Delphi surveys with international stakeholders and (iv) two international virtual consensus meetings. Stakeholders included women with multimorbidity and experience of pregnancy in the last 5 years, or are planning a pregnancy, their partners, health or social care professionals and researchers. Study adverts were shared through stakeholder charities and organisations. Results Twenty-six studies were included in the systematic literature search (2017 to 2021) reporting 185 outcomes. Thematic analysis of the focus groups added a further 28 outcomes. Two hundred and nine stakeholders completed the first Delphi survey. One hundred and sixteen stakeholders completed the second Delphi survey where 45 outcomes reached Consensus In (≥70% of all participants rating an outcome as Critically Important). Thirteen stakeholders reviewed 15 Borderline outcomes in the first consensus meeting and included seven additional outcomes. Seventeen stakeholders reviewed these 52 outcomes in a second consensus meeting, the threshold was ≥80% of all participants voting for inclusion. The final core outcome set included 11 outcomes. The five maternal outcomes were as follows: maternal death, severe maternal morbidity, change in existing long-term conditions (physical and mental), quality and experience of care and development of new mental health conditions. The six child outcomes were as follows: survival of baby, gestational age at birth, neurodevelopmental conditions/impairment, quality of life, birth weight and separation of baby from mother for health care needs. Conclusions Multimorbidity in pregnancy is a new and complex clinical research area. Following a rigorous process, this complexity was meaningfully reduced to a core outcome set that balances the views of a diverse stakeholder group.
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- 2023
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11. Safety and immunogenicity of a synthetic nanoparticle-based, T cell priming peptide vaccine against dengue in healthy adults in Switzerland: a double-blind, randomized, vehicle-controlled, phase 1 studyResearch in context
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Alix Miauton, Régine Audran, Juliette Besson, Hélène Maby-El Hajjami, Maxime Karlen, Loane Warpelin-Decrausaz, Loredana Sene, Sylvain Schaufelberger, Vincent Faivre, Mohamed Faouzi, Mary-Anne Hartley, François Spertini, and Blaise Genton
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Dengue vaccine ,Dengue virus ,T cell immunity ,Nanoparticle-based vaccine ,Medicine ,Medicine (General) ,R5-920 - Abstract
Summary: Background: Vaccines that minimize the risk of vaccine-induced antibody-dependent enhancement and severe dengue are needed to address the global health threat posed by dengue. This study assessed the safety and immunogenicity of a gold nanoparticle (GNP)-based, multi-valent, synthetic peptide dengue vaccine candidate (PepGNP-Dengue), designed to provide protective CD8+ T cell immunity, without inducing antibodies. Methods: In this randomized, double-blind, vehicle-controlled, phase 1 trial (NCT04935801), healthy naïve individuals aged 18–45 years recruited at the Centre for primary care and public health, Lausanne, Switzerland, were randomly assigned to receive PepGNP-Dengue or comparator (GNP without peptides [vehicle-GNP]). Randomization was stratified into four groups (low dose [LD] and high dose [HD]), allocation was double-blind from participants and investigators. Two doses were administered by intradermal microneedle injection 21 days apart. Primary outcome was safety, secondary outcome immunogenicity. Analysis was by intention-to-treat for safety, intention-to-treat and per protocol for immunogenicity. Findings: 26 participants were enrolled (August–September 2021) to receive PepGNP-Dengue (LD or HD, n = 10 each) or vehicle-GNP (LD or HD, n = 3 each). No vaccine-related serious adverse events occurred. Most (90%) related adverse events were mild; injection site pain and transient discoloration were most frequently reported. Injection site erythema occurred in 58% of participants. As expected, PepGNP-Dengue did not elicit anti-DENV antibodies of significance. Significant increases were observed in specific CD8+ T cells and dengue dextramer+ memory cell subsets in the LD PepGNP-Dengue but not in the HD PepGNP-Dengue or vehicle-GNP groups, specifically PepGNP-activated CD137+CD69+CD8+ T cells (day 90, +0.0318%, 95% CI: 0.0088–0.1723, p = 0.046), differentiated effector memory (TemRA) and central memory (Tcm) CD8+ T cells (day 35, +0.8/105 CD8+, 95% CI: 0.19–5.13, p = 0.014 and +1.34/105 CD8+, 95% CI: 0.1–7.34, p = 0.024, respectively). Interpretation: Results provide proof of concept that a synthetic nanoparticle-based peptide vaccine can successfully induce virus-specific CD8+ T cells. The favourable safety profile and cellular responses observed support further development of PepGNP-Dengue. Funding: Emergex Vaccines Holding Limited.
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- 2024
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12. The development of a core outcome set for studies of pregnant women with multimorbidity
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Lee, Siang Ing, Hanley, Stephanie, Vowles, Zoe, Plachcinski, Rachel, Moss, Ngawai, Singh, Megha, Gale, Chris, Fagbamigbe, Adeniyi Francis, Azcoaga-Lorenzo, Amaya, Subramanian, Anuradhaa, Taylor, Beck, Nelson-Piercy, Catherine, Damase-Michel, Christine, Yau, Christopher, McCowan, Colin, O’Reilly, Dermot, Santorelli, Gillian, Dolk, Helen, Hope, Holly, Phillips, Katherine, Abel, Kathryn M., Eastwood, Kelly-Ann, Kent, Lisa, Locock, Louise, Loane, Maria, Mhereeg, Mohamed, Brocklehurst, Peter, McCann, Sharon, Brophy, Sinead, Wambua, Steven, Hemali Sudasinghe, Sudasing Pathirannehelage Buddhika, Thangaratinam, Shakila, Nirantharakumar, Krishnarajah, and Black, Mairead
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- 2023
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13. Polypharmacy during pregnancy and associated risk factors: a retrospective analysis of 577 medication exposures among 1.5 million pregnancies in the UK, 2000-2019
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Subramanian, Anuradhaa, Azcoaga-Lorenzo, Amaya, Anand, Astha, Phillips, Katherine, Lee, Siang Ing, Cockburn, Neil, Fagbamigbe, Adeniyi Francis, Damase-Michel, Christine, Yau, Christopher, McCowan, Colin, O’Reilly, Dermot, Santorelli, Gillian, Hope, Holly, Kennedy, Jonathan I., Abel, Kathryn M., Eastwood, Kelly-Ann, Locock, Louise, Black, Mairead, Loane, Maria, Moss, Ngawai, Plachcinski, Rachel, Thangaratinam, Shakila, Brophy, Sinead, Agrawal, Utkarsh, Vowles, Zoe, Brocklehurst, Peter, Dolk, Helen, Nelson-Piercy, Catherine, and Nirantharakumar, Krishnarajah
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- 2023
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14. Understanding microglial responses in large animal models of traumatic brain injury: an underutilized resource for preclinical and translational research
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Grovola, Michael R., von Reyn, Catherine, Loane, David J., and Cullen, D. Kacy
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- 2023
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15. A population-based matched cohort study of major congenital anomalies following COVID-19 vaccination and SARS-CoV-2 infection
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Calvert, Clara, Carruthers, Jade, Denny, Cheryl, Donaghy, Jack, Hopcroft, Lisa E. M., Hopkins, Leanne, Goulding, Anna, Lindsay, Laura, McLaughlin, Terry, Moore, Emily, Taylor, Bob, Loane, Maria, Dolk, Helen, Morris, Joan, Auyeung, Bonnie, Bhaskaran, Krishnan, Gibbons, Cheryl L., Katikireddi, Srinivasa Vittal, O’Leary, Maureen, McAllister, David, Shi, Ting, Simpson, Colin R., Robertson, Chris, Sheikh, Aziz, Stock, Sarah J., and Wood, Rachael
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- 2023
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16. Pre-Clinical Common Data Elements for Traumatic Brain Injury Research: Progress and Use Cases
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LaPlaca, Michelle C, Huie, J Russell, Alam, Hasan B, Bachstetter, Adam D, Bayir, Hűlya, Bellgowan, Patrick F, Cummings, Diana, Dixon, C Edward, Ferguson, Adam R, Ferland-Beckham, Chantelle, Floyd, Candace L, Friess, Stuart H, Galanopoulou, Aristea S, Hall, Edward D, Harris, Neil G, Hawkins, Bridget E, Hicks, Ramona R, Hulbert, Lindsey E, Johnson, Victoria E, Kabitzke, Patricia A, Lafrenaye, Audrey D, Lemmon, Vance P, Lifshitz, Carrie W, Lifshitz, Jonathan, Loane, David J, Misquitta, Leonie, Nikolian, Vahagn C, Noble-Haeusslein, Linda J, Smith, Douglas H, Taylor-Burds, Carol, Umoh, Nsini, Vovk, Olga, Williams, Aaron M, Young, Margaret, and Zai, Laila J
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Neurosciences ,Brain Disorders ,Traumatic Head and Spine Injury ,Traumatic Brain Injury (TBI) ,Physical Injury - Accidents and Adverse Effects ,Animals ,Brain Injuries ,Traumatic ,Common Data Elements ,Disease Models ,Animal ,big data ,common data elements ,missing value analysis ,pre-clinical ,reproducibility ,Clinical Sciences ,Neurology & Neurosurgery - Abstract
Traumatic brain injury (TBI) is an extremely complex condition due to heterogeneity in injury mechanism, underlying conditions, and secondary injury. Pre-clinical and clinical researchers face challenges with reproducibility that negatively impact translation and therapeutic development for improved TBI patient outcomes. To address this challenge, TBI Pre-clinical Working Groups expanded upon previous efforts and developed common data elements (CDEs) to describe the most frequently used experimental parameters. The working groups created 913 CDEs to describe study metadata, animal characteristics, animal history, injury models, and behavioral tests. Use cases applied a set of commonly used CDEs to address and evaluate the degree of missing data resulting from combining legacy data from different laboratories for two different outcome measures (Morris water maze [MWM]; RotorRod/Rotarod). Data were cleaned and harmonized to Form Structures containing the relevant CDEs and subjected to missing value analysis. For the MWM dataset (358 animals from five studies, 44 CDEs), 50% of the CDEs contained at least one missing value, while for the Rotarod dataset (97 animals from three studies, 48 CDEs), over 60% of CDEs contained at least one missing value. Overall, 35% of values were missing across the MWM dataset, and 33% of values were missing for the Rotarod dataset, demonstrating both the feasibility and the challenge of combining legacy datasets using CDEs. The CDEs and the associated forms created here are available to the broader pre-clinical research community to promote consistent and comprehensive data acquisition, as well as to facilitate data sharing and formation of data repositories. In addition to addressing the challenge of standardization in TBI pre-clinical studies, this effort is intended to bring attention to the discrepancies in assessment and outcome metrics among pre-clinical laboratories and ultimately accelerate translation to clinical research.
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- 2021
17. Accuracy of congenital anomaly coding in live birth children recorded in European health care databases, a EUROlinkCAT study
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Bakker, Marian K., Loane, Maria, Garne, Ester, Ballardini, Elisa, Cavero-Carbonell, Clara, García, Laura, Gissler, Mika, Given, Joanne, Heino, Anna, Jamry-Dziurla, Anna, Jordan, Sue, Urhoj, Stine Kjaer, Latos-Bieleńska, Anna, Limb, Elisabeth, Lutke, Renee, Neville, Amanda J., Pierini, Anna, Santoro, Michele, Scanlon, Ieuan, Tan, Joachim, Wellesley, Diana, de Walle, Hermien E. K., and Morris, Joan K.
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- 2023
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18. Timing of Cardiac Surgical Interventions and Postoperative Mortality in Children With Severe Congenital Heart Defects Across Europe: Data From the EUROlinkCAT Study
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Mads Damkjær, Ester Garne, Maria Loane, Stine K. Urhoj, Elisa Ballardini, Clara Cavero‐Carbonell, Alessio Coi, Laura García‐Villodre, Joanne Given, Mika Gissler, Anna Heino, Sue Jordan, Elizabeth Limb, Amanda J Neville, Anna Pierini, Anke Rissmann, Joachim Tan, Ieuan Scanlon, and Joan K Morris
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cardiac surgery ,congenital heart defects ,pediatric cardiology ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background The purpose of this study was to evaluate the timing of the first cardiac surgery, the number of cardiac surgeries performed, and 30‐day postoperative mortality rate for children with severe congenital heart defects (sCHDs) in their first 5 years of life. Methods and Results This was a population‐based data linkage cohort study linking information from 9 European congenital anomaly registries to vital statistics and hospital databases. Data were extracted for 5693 children with sCHDs born from 1995 to 2004. Subgroup analyses were performed for specific types of sCHD. Children with sCHDs underwent their first surgical intervention at a median age of 3.6 (95% CI, 2.6–4.5) weeks. The timing of the first surgery for most subtypes of sCHD was consistent across Europe. In the first 5 years of life, children with hypoplastic left heart underwent the most cardiac surgeries, with a median of 4.4 (95% CI, 3.1–5.6). The 30‐day postoperative mortality rate in children aged
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- 2023
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19. Causes of death in children with congenital anomalies up to age 10 in eight European countries
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Mika Gissler, Maria Loane, Ingeborg Barisic, Hermien E K de Walle, Miriam Gatt, Kari Klungsoyr, Anna Pierini, Anke Rissmann, Oscar Zurriaga, Diana G Wellesley, Clara Cavero-Carbonell, Olatz Mokoroa, Judith Rankin, Ester Garne, Sue Jordan, Anna Heino, Michele Santoro, Alessio Coi, Joan Morris, Svetlana V Glinianaia, Elisa Ballardini, Joachim Tan, Abigail Reid, Stine Kjaer Urhoj, Lyubov Yevtushok, Diana Akhmedzhanova, Joanne Given, Amanda Julie Neville, Amaia Aizpurua, Renee Lutke, and Daniel S Thayer
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Pediatrics ,RJ1-570 - Abstract
Background Congenital anomalies (CAs) increase the risk of death during infancy and childhood. This study aimed to evaluate the accuracy of using death certificates to estimate the burden of CAs on mortality for children under 10 years old.Methods Children born alive with a major CA between 1 January 1995 and 31 December 2014, from 13 population-based European CA registries were linked to mortality records up to their 10th birthday or 31 December 2015, whichever was earlier.Results In total 4199 neonatal, 2100 postneonatal and 1087 deaths in children aged 1–9 years were reported. The underlying cause of death was a CA in 71% (95% CI 64% to 78%) of neonatal and 68% (95% CI 61% to 74%) of postneonatal infant deaths. For neonatal deaths the proportions varied by registry from 45% to 89% and by anomaly from 53% for Down syndrome to 94% for tetralogy of Fallot. In children aged 1–9, 49% (95% CI 42% to 57%) were attributed to a CA. Comparing mortality in children with anomalies to population mortality predicts that over 90% of all deaths at all ages are attributable to the anomalies. The specific CA was often not reported on the death certificate, even for lethal anomalies such as trisomy 13 (only 80% included the code for trisomy 13).Conclusions Data on the underlying cause of death from death certificates alone are not sufficient to evaluate the burden of CAs on infant and childhood mortality across countries and over time. Linked data from CA registries and death certificates are necessary for obtaining accurate estimates.
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- 2023
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20. Antiasthmatic prescriptions in children with and without congenital anomalies: a population-based study
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Mika Gissler, Susan Jordan, Maria Loane, Anna Pierini, Joan K Morris, Clara Cavero-Carbonell, Ester Garne, Anna Heino, Alessio Coi, Elisa Ballardini, Gianni Astolfi, Joachim Tan, Joanne Emma Given, Stine Kjaer Urhoj, Ieuan Scanlon, Laia Barrachina-Bonet, and Natalie Divin
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Medicine - Abstract
Objectives To explore the risk of being prescribed/dispensed medications for respiratory symptoms and breathing difficulties in children with and without congenital anomalies.Design A EUROlinkCAT population-based data linkage cohort study. Data on children with and without congenital anomalies were linked to prescription databases to identify children who did/did not receive antiasthmatic prescriptions. Data were analysed by age, European region, class of antiasthmatic, anomaly, sex, gestational age and birth cohort.Setting Children born 2000–2014 in six regions within five European countries.Participants 60 662 children with congenital anomalies and 1 722 912 reference children up to age 10 years.Primary outcome measure Relative risks (RR) of >1 antiasthmatic prescription in a year, identified using Anatomical Therapeutic Chemical classification codes beginning with R03.Results There were significant differences in the prescribing of antiasthmatics in the six regions. Children with congenital anomalies had a significantly higher risk of being prescribed antiasthmatics (RR 1.41, 95% CI 1.35 to 1.48) compared with reference children. The increased risk was consistent across all regions and all age groups. Children with congenital anomalies were more likely to be prescribed beta-2 agonists (RR 1.71, 95% CI 1.60 to 1.83) and inhaled corticosteroids (RR 1.74, 95% CI 1.61 to 1.87). Children with oesophageal atresia, genetic syndromes and chromosomal anomalies had over twice the risk of being prescribed antiasthmatics compared with reference children. Children with congenital anomalies born
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- 2023
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21. Understanding microglial responses in large animal models of traumatic brain injury: an underutilized resource for preclinical and translational research
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Michael R. Grovola, Catherine von Reyn, David J. Loane, and D. Kacy Cullen
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Mild TBI ,Neuroinflammation ,Microglia ,Large animal models ,Preclinical models ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Traumatic brain injury (TBI) often results in prolonged or permanent brain dysfunction with over 2.8 million affected annually in the U.S., including over 56,000 deaths, with over 5 million total survivors exhibiting chronic deficits. Mild TBI (also known as concussion) accounts for over 75% of all TBIs every year. Mild TBI is a heterogeneous disorder, and long-term outcomes are dependent on the type and severity of the initial physical event and compounded by secondary pathophysiological consequences, such as reactive astrocytosis, edema, hypoxia, excitotoxicity, and neuroinflammation. Neuroinflammation has gained increasing attention for its role in secondary injury as inflammatory pathways can have both detrimental and beneficial roles. For example, microglia—resident immune cells of the central nervous system (CNS)—influence cell death pathways and may contribute to progressive neurodegeneration but also aid in debris clearance and neuroplasticity. In this review, we will discuss the acute and chronic role of microglia after mild TBI, including critical protective responses, deleterious effects, and how these processes vary over time. These descriptions are contextualized based on interspecies variation, sex differences, and prospects for therapy. We also highlight recent work from our lab that was the first to describe microglial responses out to chronic timepoints after diffuse mild TBI in a clinically relevant large animal model. The scaled head rotational acceleration of our large animal model, paired with the gyrencephalic architecture and appropriate white:gray matter ratio, allows us to produce pathology with the same anatomical patterns and distribution of human TBI, and serves as an exemplary model to examine complex neuroimmune response post-TBI. An improved understanding of microglial influences in TBI could aid in the development of targeted therapeutics to accentuate positive effects while attenuating detrimental post-injury responses over time.
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- 2023
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22. Polypharmacy during pregnancy and associated risk factors: a retrospective analysis of 577 medication exposures among 1.5 million pregnancies in the UK, 2000-2019
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Anuradhaa Subramanian, Amaya Azcoaga-Lorenzo, Astha Anand, Katherine Phillips, Siang Ing Lee, Neil Cockburn, Adeniyi Francis Fagbamigbe, Christine Damase-Michel, Christopher Yau, Colin McCowan, Dermot O’Reilly, Gillian Santorelli, Holly Hope, Jonathan I. Kennedy, Kathryn M. Abel, Kelly-Ann Eastwood, Louise Locock, Mairead Black, Maria Loane, Ngawai Moss, Rachel Plachcinski, Shakila Thangaratinam, Sinead Brophy, Utkarsh Agrawal, Zoe Vowles, Peter Brocklehurst, Helen Dolk, Catherine Nelson-Piercy, Krishnarajah Nirantharakumar, and on behalf of the MuM-PreDiCT Group
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Multiple medications ,Polypharmacy ,Medications ,Prescriptions ,Pregnancy ,Multimorbidity ,Medicine - Abstract
Abstract Background The number of medications prescribed during pregnancy has increased over the past few decades. Few studies have described the prevalence of multiple medication use among pregnant women. This study aims to describe the overall prevalence over the last two decades among all pregnant women and those with multimorbidity and to identify risk factors for polypharmacy in pregnancy. Methods A retrospective cohort study was conducted between 2000 and 2019 using the Clinical Practice Research Datalink (CPRD) pregnancy register. Prescription records for 577 medication categories were obtained. Prevalence estimates for polypharmacy (ranging from 2+ to 11+ medications) were presented along with the medications commonly prescribed individually and in pairs during the first trimester and the entire pregnancy period. Logistic regression models were performed to identify risk factors for polypharmacy. Results During the first trimester (812,354 pregnancies), the prevalence of polypharmacy ranged from 24.6% (2+ medications) to 0.1% (11+ medications). During the entire pregnancy period (774,247 pregnancies), the prevalence ranged from 58.7 to 1.4%. Broad-spectrum penicillin (6.6%), compound analgesics (4.5%) and treatment of candidiasis (4.3%) were commonly prescribed. Pairs of medication prescribed to manage different long-term conditions commonly included selective beta 2 agonists or selective serotonin re-uptake inhibitors (SSRIs). Risk factors for being prescribed 2+ medications during the first trimester of pregnancy include being overweight or obese [aOR: 1.16 (1.14–1.18) and 1.55 (1.53–1.57)], belonging to an ethnic minority group [aOR: 2.40 (2.33–2.47), 1.71 (1.65–1.76), 1.41 (1.35–1.47) and 1.39 (1.30–1.49) among women from South Asian, Black, other and mixed ethnicities compared to white women] and smoking or previously smoking [aOR: 1.19 (1.18–1.20) and 1.05 (1.03–1.06)]. Higher and lower age, higher gravidity, increasing number of comorbidities and increasing level of deprivation were also associated with increased odds of polypharmacy. Conclusions The prevalence of polypharmacy during pregnancy has increased over the past two decades and is particularly high in younger and older women; women with high BMI, smokers and ex-smokers; and women with multimorbidity, higher gravidity and higher levels of deprivation. Well-conducted pharmaco-epidemiological research is needed to understand the effects of multiple medication use on the developing foetus.
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- 2023
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23. A population-based matched cohort study of major congenital anomalies following COVID-19 vaccination and SARS-CoV-2 infection
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Clara Calvert, Jade Carruthers, Cheryl Denny, Jack Donaghy, Lisa E. M. Hopcroft, Leanne Hopkins, Anna Goulding, Laura Lindsay, Terry McLaughlin, Emily Moore, Bob Taylor, Maria Loane, Helen Dolk, Joan Morris, Bonnie Auyeung, Krishnan Bhaskaran, Cheryl L. Gibbons, Srinivasa Vittal Katikireddi, Maureen O’Leary, David McAllister, Ting Shi, Colin R. Simpson, Chris Robertson, Aziz Sheikh, Sarah J. Stock, and Rachael Wood
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Science - Abstract
The risks of major congenital anomalies associated with SARS-CoV-2 vaccination in early pregnancy are not well understood. Here, the authors conduct a population-based cohort study using electronic health records from Scotland and find no evidence of an association, supporting vaccine safety in pregnancy.
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- 2023
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24. Spurious laboratory results associated with immunoglobulin M gammopathy in a dog with multiple myeloma
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Samantha C. Loane, Daniel A. Castillo, Anne‐Lorraine D. M. Peschard, Harriet R. Hall, and Andre J. Kortum
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false‐positive ,hypoglycemia ,paraprotein ,serology ,Veterinary medicine ,SF600-1100 - Abstract
Abstract An 11 year old female‐neutered Labrador presented for facial swelling. Clinicopathological abnormalities included hyperglobulinemia, azotemia, hypercalcemia, nonregenerative anemia, thrombocytopenia, and spurious hypoglycemia. Normoglycemia was subsequently confirmed using a cage‐side analyzer (AlphaTRAK, Zoetis, UK). Serum and urine protein electrophoresis documented monoclonal (immunoglobulin M) gammopathy with Bence‐Jones proteinuria. Computed tomography imaging revealed a monostotic osteolytic bone‐lesion, and bone marrow cytology and histopathology documented plasmacytosis with multiple myeloma oncogene 1 / interferon regulatory factor 4 positivity, consistent with multiple myeloma. Infectious disease testing initially indicated seropositivity for Leishmania, Borrelia, and Anaplasma spp.; however, Leishmania PCR (splenic and bone marrow aspirates), and paired serological titers for Borrelia and Anaplasma were negative. Consequently, initial serological results were considered to be false positive because of paraproteinemia‐associated assay interference. Chemotherapy (prednisolone and melphalan combination therapy) was initiated, but the dog was euthanased 30 days later because of the development of pericardial effusion. This is a report of spurious serological (and other laboratory) results occurring secondary to monoclonal gammopathy in a dog.
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- 2022
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25. Medication use in Northern Ireland in early pregnancy: Agreement between maternal self-report and prescribing records
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Joanne Given, Helen Dolk, and Maria Loane
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Demography. Population. Vital events ,HB848-3697 - Abstract
Objective To assess the agreement between medication data reported by the mother at the pregnancy booking interview and recorded by midwives in the Northern Ireland Maternity System (NIMATS) compared to dispensed prescription data recorded in the Enhanced Prescribing Database (EPD). Method As part of a larger cross-sectional study investigating the prevalence of prescriptions dispensed between the last menstrual period (LMP) and the first antenatal visit 2011-2016, this sub-study assessed the agreement between self-reported medication use recorded in NIMATS and EPD compared to NIMATS, 2015-2016. Sensitivity and specificity compared to EPD were also calculated. This shorter time period was used due to underreporting of non-supplement medications before 2015 in NIMATS. Results Between 2015-2016, there were 34,432 pregnancies to 34,096 women. In NIMATS 96.8% of women reported taking medications during early pregnancy compared to 64.3% of women having prescriptions dispensed in EPD. Folic acid (low and high-dose) was the most common medication recorded in both NIMATS (57.2%) and EPD (26.2%). Antibiotics, analgesics, antacids and anticoagulants were more commonly recorded in NIMATS but all other non-supplement medications were more common in EPD. Agreement between NIMATS and EPD ranged from 2.6% for vitamins to 87.8% for insulin. Sensitivity ranged from 2.5% for cardiac medications to 84.3% for anticoagulants. Specificity ranged from 47.6% for antibiotics to 100% for cardiac and antiviral medications. Folic acid (low and high-dose), vitamins, antibiotics and analgesics were the only medications with specificity less than 90%. Conclusion Over-the-counter medications such as low-dose folic acid, antacids and analgesics were recorded more at the maternity booking interview (NIMATS), while medications requiring prescriptions were recorded more in EPD. This is important information for determining which data source to use in future studies assessing medication use.
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- 2023
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26. Risk factors for admission and length of stay in hospital for children with and without congenital anomalies: A EUROlinkCAT study
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Joanne Given, Ester Garne, Joan Morris, Maria Loane, and EUROlinkCAT Working Group
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Demography. Population. Vital events ,HB848-3697 - Abstract
Objective To explore risk factors for hospital admission, and length of stay (LOS) in hospital, among children with congenital anomalies (CAs) and reference children without CAs in Europe. Method A European population-based data-linkage cohort study was conducted including children with CAs (born 1995-2014) registered in seven EUROCAT CA registries and children without CAs (reference children) living in the same geographical areas. Data on hospitalisation and LOS (1995-2015) for all children aged
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- 2023
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27. EUROlinkCAT: A linked European cohort of children with congenital anomalies
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Maria Loane, Joan Morris, Ester Garne, and EUROlinkCAT Working Group
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Demography. Population. Vital events ,HB848-3697 - Abstract
Objective To establish a linked European cohort of children with congenital anomalies (CAs) to evaluate mortality and morbidity outcomes of these children up to the age of 10 years. Method EUROlinkCAT supported 22 EUROCAT population-based congenital anomaly registries in 14 countries to link their data on children with CAs to mortality, vital statistics, hospital discharge and prescription databases. All live births with a CA born 1995-2014 recorded in the registries were followed up to age 10 years or to 31st December 2015. Each registry transformed their local mortality and morbidity data to a Common Data Model (CDM) and ran centrally created syntax scripts and produced tables/outputs in a standard form for meta-analysis. Analyses were performed on 100 different congenital anomaly subgroups for children
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- 2023
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28. Ethics and legal requirements for data linkage in 14 European countries for children with congenital anomalies
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Babak Khoshnood, David Tucker, Susan Jordan, Hanitra Randrianaivo, Maria Loane, Ingeborg Barisic, Miriam Gatt, Kari Klungsoyr, Anna Pierini, Anke Rissmann, Joan K Morris, Clara Cavero-Carbonell, Vera Nelen, Amanda J Neville, Ester Garne, Hermien de Walle, Carlos Dias, Wladimir Wertelecki, Joachim Tan, Hugh Claridge, Sonja Kiuru-Kuhlefelt, and Olatz Mokoroa Carollo
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Medicine - Abstract
Introduction Linking healthcare data sets can create valuable resources for research, particularly when investigating rare exposures or outcomes. However, across Europe, the permissions processes required to access data can be complex. This paper documents the processes required by the EUROlinkCAT study investigators to research the health and survival of children with congenital anomalies in Europe.Methods Eighteen congenital anomaly registries in 14 countries provided information on all the permissions required to perform surveillance of congenital anomalies and to link their data on live births with available vital statistics and healthcare databases for research. Small number restrictions imposed by data providers were also documented.Results The permissions requirements varied substantially, with certain registries able to conduct congenital anomaly surveillance as part of national or regional healthcare provision, while others were required to obtain ethics approvals or informed consent. Data linkage and analysis for research purposes added additional layers of complexity for registries, with some required to obtain several permissions, including ethics approvals to link the data. Restrictions relating to small numbers often resulted in a registry’s data on specific congenital anomalies being unusable.Conclusion The permissions required to obtain and link data on children with congenital anomalies varied greatly across Europe. The variation and complexity present a significant obstacle to the use of such data, especially in large data linkage projects. Furthermore, small number restrictions severely limited the research that could be performed for children with specific rare congenital anomalies.
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- 2023
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29. Locus coeruleus imaging as a biomarker for noradrenergic dysfunction in neurodegenerative diseases.
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Betts, Matthew J, Kirilina, Evgeniya, Otaduy, Maria CG, Ivanov, Dimo, Acosta-Cabronero, Julio, Callaghan, Martina F, Lambert, Christian, Cardenas-Blanco, Arturo, Pine, Kerrin, Passamonti, Luca, Loane, Clare, Keuken, Max C, Trujillo, Paula, Lüsebrink, Falk, Mattern, Hendrik, Liu, Kathy Y, Priovoulos, Nikos, Fliessbach, Klaus, Dahl, Martin J, Maaß, Anne, Madelung, Christopher F, Meder, David, Ehrenberg, Alexander J, Speck, Oliver, Weiskopf, Nikolaus, Dolan, Raymond, Inglis, Ben, Tosun, Duygu, Morawski, Markus, Zucca, Fabio A, Siebner, Hartwig R, Mather, Mara, Uludag, Kamil, Heinsen, Helmut, Poser, Benedikt A, Howard, Robert, Zecca, Luigi, Rowe, James B, Grinberg, Lea T, Jacobs, Heidi IL, Düzel, Emrah, and Hämmerer, Dorothea
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Locus Coeruleus ,Humans ,Neurodegenerative Diseases ,Norepinephrine ,Magnetic Resonance Imaging ,Biomarkers ,locus coeruleus ,magnetic resonance imaging ,neurodegeneration ,noradrenaline (NA) biomarker ,noradrenaline ,biomarker ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Neurology & Neurosurgery - Abstract
Pathological alterations to the locus coeruleus, the major source of noradrenaline in the brain, are histologically evident in early stages of neurodegenerative diseases. Novel MRI approaches now provide an opportunity to quantify structural features of the locus coeruleus in vivo during disease progression. In combination with neuropathological biomarkers, in vivo locus coeruleus imaging could help to understand the contribution of locus coeruleus neurodegeneration to clinical and pathological manifestations in Alzheimer's disease, atypical neurodegenerative dementias and Parkinson's disease. Moreover, as the functional sensitivity of the noradrenergic system is likely to change with disease progression, in vivo measures of locus coeruleus integrity could provide new pathophysiological insights into cognitive and behavioural symptoms. Locus coeruleus imaging also holds the promise to stratify patients into clinical trials according to noradrenergic dysfunction. In this article, we present a consensus on how non-invasive in vivo assessment of locus coeruleus integrity can be used for clinical research in neurodegenerative diseases. We outline the next steps for in vivo, post-mortem and clinical studies that can lay the groundwork to evaluate the potential of locus coeruleus imaging as a biomarker for neurodegenerative diseases.
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- 2019
30. Evaluation of symmetric dimethylarginine in cats with acute kidney injury and chronic kidney disease
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Samantha C. Loane, James M. Thomson, Timothy L. Williams, and Katie E. McCallum
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feline ,renal biomarker ,SDMA ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Background Serum symmetric dimethylarginine (SDMA) concentrations are considered a biomarker for renal dysfunction in dogs and humans with acute kidney injury (AKI). No studies have assessed SDMA in cats with AKI. Hypothesis/Objectives SDMA correctly identifies cats with azotemic AKI. Animals Fifteen control cats, 22 with novel AKI, 13 with acute on chronic‐AKI (AoC) and 19 with chronic kidney disease (CKD). Methods Retrospective study. Cats with azotemia (serum creatinine concentrations >1.7 mg/dL) were defined as having AKI or CKD based on history, clinical signs, clinicopathological findings and diagnostic imaging, and classified using the International Renal Interest Society (IRIS) grading/staging systems. Serum SDMA concentrations were compared between groups with nonparametric methods, and correlations assessed using Spearman's correlation coefficient. Data are presented as median [range]. Results SDMA concentrations were 11 (8‐21) μg/dL, 36 (9‐170)μg/dL, 33 (22‐75) μg/dL and 25 (12‐69) μg/dL in control, novel AKI, AoC and CKD cats. SDMA concentrations were significantly higher in cats with novel AKI (P
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- 2022
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31. Breastfeeding, pregnancy, medicines, neurodevelopment, and population databases: the information desert
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Sue Jordan, Rebecca Bromley, Christine Damase-Michel, Joanne Given, Sophia Komninou, Maria Loane, Naomi Marfell, and Helen Dolk
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Breastfeeding ,Pharmacoepidemiology ,Pharmacovigilance ,Pregnancy ,Child development ,Adverse drug reactions ,Pediatrics ,RJ1-570 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background The pharmacoepidemiology of the long-term benefits and harms of medicines in pregnancy and breastfeeding has received little attention. The impact of maternal medicines on children is increasingly recognised as a source of avoidable harm. The focus of attention has expanded from congenital anomalies to include less visible, but equally important, outcomes, including cognition, neurodevelopmental disorders, educational performance, and childhood ill-health. Breastfeeding, whether as a source of medicine exposure, a mitigator of adverse effects or as an outcome, has been all but ignored in pharmacoepidemiology and pharmacovigilance: a significant ‘blind spot’. Whole-population data on breastfeeding: why we need them Optimal child development and maternal health necessitate breastfeeding, yet little information exists to guide families regarding the safety of medicine use during lactation. Breastfeeding initiation or success may be altered by medicine use, and breastfeeding may obscure the true relationship between medicine exposure during pregnancy and developmental outcomes. Absent or poorly standardised recording of breastfeeding in most population databases hampers analysis and understanding of the complex relationships between medicine, pregnancy, breastfeeding and infant and maternal health. The purpose of this paper is to present the arguments for breastfeeding to be included alongside medicine use and neurodevelopmental outcomes in whole-population database investigations of the harms and benefits of medicines during pregnancy, the puerperium and postnatal period. We review: 1) the current situation, 2) how these complexities might be accommodated in pharmacoepidemiological models, using antidepressants and antiepileptics as examples; 3) the challenges in obtaining comprehensive data. Conclusions The scarcity of whole-population data and the complexities of the inter-relationships between breastfeeding, medicines, co-exposures and infant outcomes are significant barriers to full characterisation of the benefits and harms of medicines during pregnancy and breastfeeding. This makes it difficult to answer the questions: ‘is it safe to breastfeed whilst taking this medicine’, and ‘will this medicine interfere with breastfeeding and/ or infants’ development’?
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- 2022
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32. Tilting Styx and Nix but not Uranus with a Spin-Precession-Mean-motion resonance
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Quillen, Alice C., Chen, Yuan-Yuan, Noyelles, Benoit, and Loane, Santiago
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Astrophysics - Earth and Planetary Astrophysics - Abstract
A Hamiltonian model is constructed for the spin axis of a planet perturbed by a nearby planet with both planets in orbit about star. We expand the planet-planet gravitational potential perturbation to first order in orbital inclinations and eccentricities, finding terms describing spin resonances involving the spin precession rate and the two planetary mean motions. Convergent planetary migration allows the spinning planet to be captured into spin resonance. With initial obliquity near zero, the spin resonance can lift the planet's obliquity to near 90 or 180 degrees depending upon whether the spin resonance is first or zero-th order in inclination. Past capture of Uranus into such a spin resonance could give an alternative non-collisional scenario accounting for Uranus's high obliquity. However we find that the time spent in spin resonance must be so long that this scenario cannot be responsible for Uranus's high obliquity. Our model can be used to study spin resonance in satellite systems. Our Hamiltonian model explains how Styx and Nix can be tilted to high obliquity via outward migration of Charon, a phenomenon previously seen in numerical simulations., Comment: Submitted to Celestial Mechanics and Dynamical Astronomy
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- 2017
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33. House and Senate Floor and Committee Action to Reauthorize the Elementary and Secondary Education Act: 1966 to Present. CRS Report R43761, Version 5. Updated
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Library of Congress, Congressional Research Service (CRS), Skinner, Rebecca R., and Loane, Shannon S.
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The Elementary and Secondary Education Act (ESEA) was initially enacted in 1965 (P.L. 89-10). Since then, there have been 13 major reauthorizations of the ESEA, with the most recent reauthorization occurring in 2015 with the Every Student Succeeds Act (ESSA, P.L. 114-95). This report provides information on the votes taken in the House and Senate in the committees of jurisdiction and on the House and Senate floors prior to and following conference proceedings for the ESEA of 1965 and subsequent major reauthorizations. The report also provides vote information on comprehensive ESEA reauthorization bills that were considered in the committees of jurisdiction or on the House or Senate floors following the enactment of the No Child Left Behind Act of 2001 (NCLB; P.L. 107-110) but prior to the consideration of the ESSA. During the 112th and 113th Congresses, both committees with jurisdiction over the ESEA ordered ESEA reauthorization bills to be reported. In the 113th Congress, an ESEA reauthorization bill was considered on the House floor.
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- 2016
34. Survival of children with rare structural congenital anomalies: a multi-registry cohort study
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Alessio Coi, Michele Santoro, Anna Pierini, Judith Rankin, Svetlana V. Glinianaia, Joachim Tan, Abigail-Kate Reid, Ester Garne, Maria Loane, Joanne Given, Elisa Ballardini, Clara Cavero-Carbonell, Hermien E. K. de Walle, Miriam Gatt, Laura García-Villodre, Mika Gissler, Sue Jordan, Sonja Kiuru-Kuhlefelt, Stine Kjaer Urhoj, Kari Klungsøyr, Nathalie Lelong, L. Renée Lutke, Amanda J. Neville, Makan Rahshenas, Ieuan Scanlon, Diana Wellesley, and Joan K. Morris
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Medicine - Abstract
Abstract Background Congenital anomalies are the leading cause of perinatal, neonatal and infant mortality in developed countries. Large long-term follow-up studies investigating survival beyond the first year of life in children with rare congenital anomalies are costly and sufficiently large standardized cohorts are difficult to obtain due to the rarity of some anomalies. This study aimed to investigate the survival up to 10 years of age of children born with a rare structural congenital anomaly in the period 1995–2014 in Western Europe. Methods Live births from thirteen EUROCAT (European network for the epidemiological surveillance of congenital anomalies) population-based registries were linked to mortality records. Survival for 12,685 live births with one of the 31 investigated rare structural congenital anomalies (CAs) was estimated at 1 week, 4 weeks and 1, 5 and 10 years of age within each registry and combined across Europe using random effects meta-analyses. Differences between registries were evaluated for the eight rare CAs with at least 500 live births. Results Amongst the investigated CAs, arhinencephaly/holoprosencephaly had the lowest survival at all ages (58.1%, 95% Confidence Interval (CI): 44.3–76.2% at 1 week; 47.4%, CI: 36.4–61.6% at 1 year; 35.6%, CI: 22.2–56.9% at 10 years). Overall, children with rare CAs of the digestive system had the highest survival (> 95% at 1 week, > 84% at 10 years). Most deaths occurred within the first four weeks of life, resulting in a 10-year survival conditional on surviving 4 weeks of over 95% for 17 out of 31 rare CAs. A moderate variability in survival between participating registries was observed for the eight selected rare CAs. Conclusions Pooling standardised data across 13 European CA registries and the linkage to mortality data enabled reliable survival estimates to be obtained at five ages up to ten years. Such estimates are useful for clinical practice and parental counselling.
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- 2022
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35. Epidemiology of pre-existing multimorbidity in pregnant women in the UK in 2018: a population-based cross-sectional study
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Siang Ing Lee, Amaya Azcoaga-Lorenzo, Utkarsh Agrawal, Jonathan I. Kennedy, Adeniyi Francis Fagbamigbe, Holly Hope, Anuradhaa Subramanian, Astha Anand, Beck Taylor, Catherine Nelson-Piercy, Christine Damase-Michel, Christopher Yau, Francesca Crowe, Gillian Santorelli, Kelly-Ann Eastwood, Zoe Vowles, Maria Loane, Ngawai Moss, Peter Brocklehurst, Rachel Plachcinski, Shakila Thangaratinam, Mairead Black, Dermot O’Reilly, Kathryn M. Abel, Sinead Brophy, Krishnarajah Nirantharakumar, Colin McCowan, and on behalf of the MuM-PreDiCT Group
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Multimorbidity ,Multiple chronic conditions ,Multiple long-term conditions ,Pregnancy ,Maternity ,Epidemiology ,Gynecology and obstetrics ,RG1-991 - Abstract
Abstract Background Although maternal death is rare in the United Kingdom, 90% of these women had multiple health/social problems. This study aims to estimate the prevalence of pre-existing multimorbidity (two or more long-term physical or mental health conditions) in pregnant women in the United Kingdom (England, Northern Ireland, Wales and Scotland). Study design Pregnant women aged 15–49 years with a conception date 1/1/2018 to 31/12/2018 were included in this population-based cross-sectional study, using routine healthcare datasets from primary care: Clinical Practice Research Datalink (CPRD, United Kingdom, n = 37,641) and Secure Anonymized Information Linkage databank (SAIL, Wales, n = 27,782), and secondary care: Scottish Morbidity Records with linked community prescribing data (SMR, Tayside and Fife, n = 6099). Pre-existing multimorbidity preconception was defined from 79 long-term health conditions prioritised through a workshop with patient representatives and clinicians. Results The prevalence of multimorbidity was 44.2% (95% CI 43.7–44.7%), 46.2% (45.6–46.8%) and 19.8% (18.8–20.8%) in CPRD, SAIL and SMR respectively. When limited to health conditions that were active in the year before pregnancy, the prevalence of multimorbidity was still high (24.2% [23.8–24.6%], 23.5% [23.0–24.0%] and 17.0% [16.0 to 17.9%] in the respective datasets). Mental health conditions were highly prevalent and involved 70% of multimorbidity CPRD: multimorbidity with ≥one mental health condition/s 31.3% [30.8–31.8%]). After adjusting for age, ethnicity, gravidity, index of multiple deprivation, body mass index and smoking, logistic regression showed that pregnant women with multimorbidity were more likely to be older (CPRD England, adjusted OR 1.81 [95% CI 1.04–3.17] 45–49 years vs 15–19 years), multigravid (1.68 [1.50–1.89] gravidity ≥ five vs one), have raised body mass index (1.59 [1.44–1.76], body mass index 30+ vs body mass index 18.5–24.9) and smoked preconception (1.61 [1.46–1.77) vs non-smoker). Conclusion Multimorbidity is prevalent in pregnant women in the United Kingdom, they are more likely to be older, multigravid, have raised body mass index and smoked preconception. Secondary care and community prescribing dataset may only capture the severe spectrum of health conditions. Research is needed urgently to quantify the consequences of maternal multimorbidity for both mothers and children.
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- 2022
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36. Prevalence of polypharmacy in pregnancy: a systematic review
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Catherine Nelson-Piercy, Krishnarajah Nirantharakumar, Anuradhaa Subramanian, Peter Brocklehurst, Maria Loane, Siang Ing Lee, Utkarsh Agrawal, Amaya Azcoaga-Lorenzo, Christine Damase-Michel, Katherine Phillips, Astha Anand, Zhaonan Wang, Rebecca McCowan, and Adeniyi Frances Fagbamigbe
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Medicine - Abstract
Objectives The use of medications among pregnant women has been rising over the past few decades but the reporting of polypharmacy has been sporadic. The objective of this review is to identify literature reporting the prevalence of polypharmacy among pregnant women, the prevalence of multimorbidity in women taking multiple medications in pregnancy and associated effects on maternal and offspring outcomes.Design MEDLINE and Embase were searched from their inception to 14 September 2021 for interventional trials, observational studies and systematic reviews reporting on the prevalence of polypharmacy or the use of multiple medications in pregnancy were included.Data on prevalence of polypharmacy, prevalence of multimorbidity, combinations of medications and pregnancy and offspring outcomes were extracted. A descriptive analysis was performed.Results Fourteen studies met the review criteria. The prevalence of women being prescribed two or more medications during pregnancy ranged from 4.9% (4.3%–5.5%) to 62.4% (61.3%–63.5%), with a median of 22.5%. For the first trimester, prevalence ranged from 4.9% (4.7%–5.14%) to 33.7% (32.2%–35.1%). No study reported on the prevalence of multimorbidity, or associated pregnancy outcomes in women exposed to polypharmacy.Conclusion There is a significant burden of polypharmacy among pregnant women. There is a need for evidence on the combinations of medications prescribed in pregnancy, how this specifically affects women with multiple long-term conditions and the associated benefits and harms.Tweetable abstract Our systematic review shows significant burden of polypharmacy in pregnancy but outcomes for women and offspring are unknown.PROSPERO registration number CRD42021223966.
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- 2023
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37. Maternal and child outcomes for pregnant women with pre-existing multiple long-term conditions: protocol for an observational study in the UK
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Christopher Yau, Catherine Nelson-Piercy, Krishnarajah Nirantharakumar, Richard D Riley, Anuradhaa Subramanian, Peter Brocklehurst, Sinead Brophy, Maria Loane, Helen Dolk, Shakila Thangaratinam, Muhammad Usman, Dermot O’Reilly, Jingya Wang, Colin McCowan, Louise Locock, Holly Hope, Francesca Crowe, Siang Ing Lee, Rachel Plachcinski, Utkarsh Agrawal, Amaya Azcoaga-Lorenzo, Gillian Santorelli, Beck Taylor, Mairead Black, Adeniyi Francis Fagbamigbe, Christine Damase-Michel, Ngawai Moss, Katherine Phillips, Kelly-Ann Eastwood, Astha Anand, Jonathan Ian Kennedy, Kathryn Mary Abel, Lisa Kent, Steven Wambua, Sharon McCann, Megha Singh, Mohamed Mhereeg, Neil Cockburn, Sudasing Pathirannehelage Buddhika Hemali Sudasinghe, Zoe Vowles, Charles Gadd, Stephanie Hanley, and Natalia Hong
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Medicine - Abstract
Introduction One in five pregnant women has multiple pre-existing long-term conditions in the UK. Studies have shown that maternal multiple long-term conditions are associated with adverse outcomes. This observational study aims to compare maternal and child outcomes for pregnant women with multiple long-term conditions to those without multiple long-term conditions (0 or 1 long-term conditions).Methods and analysis Pregnant women aged 15–49 years old with a conception date between 2000 and 2019 in the UK will be included with follow-up till 2019. The data source will be routine health records from all four UK nations (Clinical Practice Research Datalink (England), Secure Anonymised Information Linkage (Wales), Scotland routine health records and Northern Ireland Maternity System) and the Born in Bradford birth cohort. The exposure of two or more pre-existing, long-term physical or mental health conditions will be defined from a list of health conditions predetermined by women and clinicians. The association of maternal multiple long-term conditions with (a) antenatal, (b) peripartum, (c) postnatal and long-term and (d) mental health outcomes, for both women and their children will be examined. Outcomes of interest will be guided by a core outcome set. Comparisons will be made between pregnant women with and without multiple long-term conditions using modified Poisson and Cox regression. Generalised estimating equation will account for the clustering effect of women who had more than one pregnancy episode. Where appropriate, multiple imputation with chained equation will be used for missing data. Federated analysis will be conducted for each dataset and results will be pooled using random-effects meta-analyses.Ethics and dissemination Approval has been obtained from the respective data sources in each UK nation. Study findings will be submitted for publications in peer-reviewed journals and presented at key conferences.
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- 2023
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38. Creating a population-based cohort of children born with and without congenital anomalies using birth data matched to hospital discharge databases in 11 European regions: Assessment of linkage success and data quality.
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Maria Loane, Joanne E Given, Joachim Tan, Ingeborg Barišić, Laia Barrachina-Bonet, Clara Cavero-Carbonell, Alessio Coi, James Densem, Ester Garne, Mika Gissler, Anna Heino, Sue Jordan, Renee Lutke, Amanda J Neville, Ljubica Odak, Aurora Puccini, Michele Santoro, Ieuan Scanlon, Stine K Urhoj, Hermien E K de Walle, Diana Wellesley, and Joan K Morris
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Medicine ,Science - Abstract
Linking routinely collected healthcare administrative data is a valuable method for conducting research on morbidity outcomes, but linkage quality and accuracy needs to be assessed for bias as the data were not collected for research. The aim of this study was to describe the rates of linking data on children with and without congenital anomalies to regional or national hospital discharge databases and to evaluate the quality of the matched data. Eleven population-based EUROCAT registries participated in a EUROlinkCAT study linking data on children with a congenital anomaly and children without congenital anomalies (reference children) born between 1995 and 2014 to administrative databases including hospital discharge records. Odds ratios (OR), adjusted by region, were estimated to assess the association of maternal and child characteristics on the likelihood of being matched. Data on 102,654 children with congenital anomalies were extracted from 11 EUROCAT registries and 2,199,379 reference children from birth registers in seven regions. Overall, 97% of children with congenital anomalies and 95% of reference children were successfully matched to administrative databases. Information on maternal age, multiple birth status, sex, gestational age and birthweight were >95% complete in the linked datasets for most regions. Compared with children born at term, those born at ≤27 weeks and 28-31 weeks were less likely to be matched (adjusted OR 0.23, 95% CI 0.21-0.25 and adjusted OR 0.75, 95% CI 0.70-0.81 respectively). For children born 32-36 weeks, those with congenital anomalies were less likely to be matched (adjusted OR 0.78, 95% CI 0.71-0.85) while reference children were more likely to be matched (adjusted OR 1.28, 95% CI 1.24-1.32). Children born to teenage mothers and mothers ≥35 years were less likely to be matched compared with mothers aged 20-34 years (adjusted ORs 0.92, 95% CI 0.88-0.96; and 0.87, 95% CI 0.86-0.89 respectively). The accuracy of linkage and the quality of the matched data suggest that these data are suitable for researching morbidity outcomes in most regions/countries. However, children born preterm and those born to mothers aged
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- 2023
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39. Breastfeeding, pregnancy, medicines, neurodevelopment, and population databases: the information desert
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Jordan, Sue, Bromley, Rebecca, Damase-Michel, Christine, Given, Joanne, Komninou, Sophia, Loane, Maria, Marfell, Naomi, and Dolk, Helen
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- 2022
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40. Survival of children with rare structural congenital anomalies: a multi-registry cohort study
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Coi, Alessio, Santoro, Michele, Pierini, Anna, Rankin, Judith, Glinianaia, Svetlana V., Tan, Joachim, Reid, Abigail-Kate, Garne, Ester, Loane, Maria, Given, Joanne, Ballardini, Elisa, Cavero-Carbonell, Clara, de Walle, Hermien E. K., Gatt, Miriam, García-Villodre, Laura, Gissler, Mika, Jordan, Sue, Kiuru-Kuhlefelt, Sonja, Kjaer Urhoj, Stine, Klungsøyr, Kari, Lelong, Nathalie, Lutke, L. Renée, Neville, Amanda J., Rahshenas, Makan, Scanlon, Ieuan, Wellesley, Diana, and Morris, Joan K.
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- 2022
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41. Epidemiology of pre-existing multimorbidity in pregnant women in the UK in 2018: a population-based cross-sectional study
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Lee, Siang Ing, Azcoaga-Lorenzo, Amaya, Agrawal, Utkarsh, Kennedy, Jonathan I., Fagbamigbe, Adeniyi Francis, Hope, Holly, Subramanian, Anuradhaa, Anand, Astha, Taylor, Beck, Nelson-Piercy, Catherine, Damase-Michel, Christine, Yau, Christopher, Crowe, Francesca, Santorelli, Gillian, Eastwood, Kelly-Ann, Vowles, Zoe, Loane, Maria, Moss, Ngawai, Brocklehurst, Peter, Plachcinski, Rachel, Thangaratinam, Shakila, Black, Mairead, O’Reilly, Dermot, Abel, Kathryn M., Brophy, Sinead, Nirantharakumar, Krishnarajah, and McCowan, Colin
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- 2022
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42. Preterm birth and prescriptions for cardiovascular, antiseizure, antibiotics and antiasthmatic medication in children up to 10 years of age: a population-based data linkage cohort study across six European regions
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Mika Gissler, Susan Jordan, Maria Loane, Amanda Neville, Anna Pierini, Joan K Morris, Ester Garne, Anna Heino, Alessio Coi, Elisa Ballardini, Joachim Tan, Joanne Emma Given, Stine Kjaer Urhoj, Mads Damkjær, Ieuan Scanlon, Laura García-Villodre, and Clara Cavero- Carbonell
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Medicine - Abstract
Objectives Preterm children are exposed to many medications in neonatal intensive care units, but little is known about the effect of prematurity on medication use throughout infancy and childhood. We examined prescriptions of cardiovascular medication (CVM), antiseizure medication (ASM), antiasthmatic medication and antibiotics issued/dispensed in the first 10 years of life for very and moderately preterm children compared with term.Design Population-based data linkage cohort study linking information from birth records to prescription records.Setting Six registries from five countries in the EUROlinkCAT study.Participants The study population included 1 722 912 children, of whom 10 820 (0.6%) were very preterm (
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- 2022
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43. Region-Specific Homeostatic Identity of Astrocytes Is Essential for Defining Their Response to Pathological Insults
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Natallia Makarava, Olga Mychko, Kara Molesworth, Jennifer Chen-Yu Chang, Rebecca J. Henry, Natalya Tsymbalyuk, Volodymyr Gerzanich, J. Marc Simard, David J. Loane, and Ilia V. Baskakov
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astrocytes reactivity ,neurodegenerative diseases ,prion disease ,Alzheimer’s disease ,traumatic brain injury ,aging ,Cytology ,QH573-671 - Abstract
The transformation of astrocytes into reactive states constitutes a biological response of the central nervous system under a variety of pathological insults. Astrocytes display diverse homeostatic identities that are developmentally predetermined and regionally specified. Upon transformation into reactive states associated with neurodegenerative diseases and other neurological disorders, astrocytes acquire diverse reactive phenotypes. However, it is not clear whether their reactive phenotypes are dictated by region-specific homeostatic identity or by the nature of an insult. To address this question, region-specific gene expression profiling was performed for four brain regions (cortex, hippocampus, thalamus, and hypothalamus) in mice using a custom NanoString panel consisting of selected sets of genes associated with astrocyte functions and their reactivity for five conditions: prion disease, traumatic brain injury, brain ischemia, 5XFAD Alzheimer’s disease model and normal aging. Upon transformation into reactive states, genes that are predominantly associated with astrocytes were found to respond to insults in a region-specific manner. Regardless of the nature of the insult or the insult-specificity of astrocyte response, strong correlations between undirected GSA (gene set analysis) scores reporting on astrocyte reactivity and on their homeostatic functions were observed within each individual brain region. The insult-specific gene expression signatures did not separate well from each other and instead partially overlapped, forming continuums. The current study demonstrates that region-specific homeostatic identities of astrocytes are important for defining their response to pathological insults. Within region-specific populations, reactive astrocytes show continuums of gene expression signatures, partially overlapping between individual insults.
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- 2023
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44. Signal Detection in EUROmediCAT: Identification and Evaluation of Medication–Congenital Anomaly Associations and Use of VigiBase as a Complementary Source of Reference
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Cavadino, Alana, Sandberg, Lovisa, Öhman, Inger, Bergvall, Tomas, Star, Kristina, Dolk, Helen, Loane, Maria, Addor, Marie-Claude, Barisic, Ingeborg, Cavero-Carbonell, Clara, Garne, Ester, Gatt, Miriam, Khoshnood, Babak, Klungsøyr, Kari, Latos-Bielenska, Anna, Lelong, Nathalie, Lutke, Reneé, Materna-Kiryluk, Anna, Nelen, Vera, Nevill, Amanda, O’Mahony, Mary, Mokoroa, Olatz, Pierini, Anna, Randrianaivo, Hanitra, Rissmann, Anke, Tucker, David, Wiesel, Awi, Yevtushok, Lyubov, and Morris, Joan K
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- 2021
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45. Anti-asthmatic prescriptions in children with and without congenital anomalies: a European data linkage study.
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Natalie Divin, Ester Garne, Joan K Morris, and Maria Loane
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Anti-asthmatics ,Prescriptions ,Congenital anomalies ,Population-based ,Data linkage ,Pharmaco-epidemiology ,Demography. Population. Vital events ,HB848-3697 - Abstract
Objectives Asthma is the most common chronic disease in childhood, yet little is known about rates of asthma and wheezing in children with congenital anomalies. This study explored the prevalence and risk of receiving anti-asthmatic prescriptions in children with congenital anomalies compared to children without anomalies in six European regions/countries. Approach This was a EUROlinkCAT population-based linkage cohort study involving children from 0-9 years of age born between 2000-2014. Congenital anomaly data from six EUROCAT registries were linked to births data in national/vital statistics and to electronic prescription databases. Prescription/pharmacy dispensing records across regions were standardised to a Common Data Model. Anatomical Therapeutic Chemical classification codes beginning with R03 were used to identify anti-asthmatic prescriptions. Random-effects meta-analyses were performed to identify both the relative risk (RR) of receiving >1 anti-asthmatic prescription in a year relative to the reference group, and the heterogeneity of prevalence rates across registries and age group. Results A total of 5.1% of children with congenital anomalies and 4.9% of reference children were dropped from the study as they were not linked. Children with congenital anomalies (n=60,662) had a higher prevalence of >1 anti-asthmatic prescription and a significantly higher risk of being prescribed anti-asthmatics (RR=1.41, 95% CI 1.35-1.48) compared to reference children (n=1,722,912). The increased risk was consistent across all age groups. Children with congenital anomalies were more likely to be prescribed beta-2 agonists (RR=1.71, 95% CI 1.60-1.83) and inhaled corticosteroids (RR=1.74, 95% CI 1.61-1.87). Children with oesophageal atresia, diaphragmatic hernia, genetic syndromes and chromosomal anomalies had over twice the risk of being prescribed anti-asthmatics compared to reference children. Regional differences in prevalence and risk of anti-asthmatic prescriptions were identified. Conclusion Children aged 1 anti-asthmatic prescription across age group and across European regions. This study demonstrates that information on the prevalence of anti-asthmatic prescriptions issued/dispensed can be obtained through data linkage to monitor changes in prevalence over time.
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- 2022
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46. A national data linkage study to determine the association of congenital anomalies with standardised education outcomes.
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Anna Rawlings, Ieuan Scanlon, Svetlana Glinianaia, Judith Rankin, Maria Loane, Joan Morris, Dan Thayer, David Tucker, and Sue Jordan
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education outcomes ,educational attainment ,standardised assessment ,congenital anomalies ,congenital heart defects ,hydrocephalus ,Demography. Population. Vital events ,HB848-3697 - Abstract
Objectives Education outcomes predict life chances; however disabilities and concurrent learning difficulties are often barriers to school performance. Low educational achievement is also linked with socio-economic deprivation. We aimed to quantify the association of these factors with education outcomes by ages 12 and 17 for children in Wales (UK). Approach We linked health, socio-economic and education data for children born after 1997 in Wales, registered with any one of 17 isolated congenital anomalies. Children were included if they had known education outcomes at ages 12 (n=9,223) and 17 (n=4524). A reference population comprised children born similarly but without anomalies, also having education records at 12 (n=261,827) and 17 (n=4,524). Multinomial logistic regressions determined the likelihood of attainment in compulsory subjects by age 12 and of attaining five GCSE qualifications by age 17. We adjusted for socio-economic status by using free school meal eligibility (household deprivation) and area-based indices of deprivation. Results We identified 14 and 11 isolated anomalies that reduced the likelihood of achieving educational standards by ages 12 and 17 respectively. Educational achievements were lower for children with Down syndrome, Turner syndrome, hydrocephalus and limb reduction defects, particularly at age 12, indicating that children with anomalies may catch-up with their peers. While children with anomalies were less likely to achieve five GCSEs by age 17, there was no difference in the grades of those who did so. Deprivation, particularly at household level, further reduced the likelihood of education success. At age 17, household deprivation reduced 3-fold the odds of achieving any five GCSEs grades A*-C. Conclusions Children with congenital anomalies from the most deprived communities and households are at particular risk of low education achievement. To realise their potential, these children should be identified from medical records at an early age and offered targeted educational support as soon as possible and at every opportunity.
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- 2022
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47. Editorial: Congenital anomalies: State of the art and the new paradigms for a precision public health approach
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Babak Khoshnood, Gareth Baynam, Maria Loane, Anke Rissmann, and Lorenzo Botto
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congenital anomalies (CAs) ,epidemiology ,precision medicine ,public health ,outcomes ,Pediatrics ,RJ1-570 - Published
- 2022
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48. Positive Polynomials on Riesz Spaces
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Cruickshank, James, Loane, John, and Ryan, Raymond A.
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Mathematics - Functional Analysis ,46A40, 46G20 (Primary), 46B30 (Secondary) - Abstract
We prove some properties of positive polynomial mappings between Riesz spaces, using finite difference calculus. We establish the polynomial analogue of the classical result that positive, additive mappings are linear. And we prove a polynomial version of the Kantorovich extension theorem., Comment: 12 pages
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- 2015
49. Aerobiology of the Wheat Blast Pathogen: Inoculum Monitoring and Detection of Fungicide Resistance Alleles
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Samara Nunes Campos Vicentini, Nichola J. Hawkins, Kevin M. King, Silvino Intra Moreira, Adriano Augusto de Paiva Custódio, Rui Pereira Leite Júnior, Diego Portalanza, Felipe Rafael Garcés-Fiallos, Loane Dantas Krug, Jonathan S. West, Bart A. Fraaije, Waldir Cintra De Jesus Júnior, and Paulo Cezar Ceresini
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Pyricularia oryzae Triticum lineage ,airborne spores ,epidemic predictors ,integrated disease management ,Agriculture - Abstract
Wheat blast, caused by the ascomycetous fungus Pyricularia oryzae Triticum lineage (PoTl), is mainly controlled by fungicide use, but resistance to the main fungicide groups—sterol demethylase (DMI), quinone outside (QoI), and succinate dehydrogenase inhibitors (SDHI)—has been reported in Brazil. In order to rationalize fungicide inputs (e.g., choice, timing, dose-rate, spray number, and mixing/alternation) for managing wheat blast, we describe a new monitoring tool, enabling the quantitative measurement of pathogen’s inoculum levels and detection of fungicide resistance alleles. Wheat blast airborne spores (aerosol populations) were monitored at Londrina in Paraná State, a major wheat cropping region in Brazil, using an automated high-volume cyclone coupled with a lab-based quantitative real-time PCR (qPCR) assay. The objectives of our study were as follows: (1) to monitor the amount of PoTl airborne conidia during 2019–2021 based on DNA detection, (2) to reveal the prevalence of QoI resistant (QoI-R) cytochrome b alleles in aerosol populations of wheat blast, and (3) to determine the impact of weather on the dynamics of wheat blast aerosol populations and spread of QoI resistant alleles. PoTl inoculum was consistently detected in aerosols during the wheat cropping seasons from 2019 to 2021, but amounts varied significantly between seasons, with highest amounts detected in 2019. High peaks of PoTl DNA were also continuously detected during the off-season in 2020 and 2021. The prevalence of QoI resistant (QoI-R) cytochrome b G143A alleles in aerosol populations was also determined for a subset of 10 PoTl positive DNA samples with frequencies varying between 10 and 91% using a combination of PCR-amplification and SNP detection pyrosequencing. Statistically significant but low correlations were found between the levels of pathogen and the weather variables. In conclusion, for wheat blast, this system provided prior detection of airborne spore levels of the pathogen and of the prevalence of fungicide resistance alleles.
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- 2023
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50. Optimal 3D arm strategies for maximizing twist rotation during somersault of a rigid-body model
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Bailly, François, Charbonneau, Eve, Danès, Loane, and Begon, Mickael
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- 2021
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