18 results on '"Oskarsdottir, Gudrun"'
Search Results
2. Real-World Treatment Patterns and Survival Outcomes for Patients with Non-Metastatic Non-Small-Cell Lung Cancer in Sweden: A Nationwide Registry Analysis from the I-O Optimise Initiative
- Author
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Oskarsdottir, Gudrun N., primary, Lampa, Erik, additional, Berglund, Anders, additional, Rosengren, Linda, additional, Ulvestad, Maria, additional, Boros, Miklos, additional, Daumont, Melinda J., additional, Rault, Caroline, additional, Emanuel, Gabrielle, additional, Leal, Cátia, additional, Schoemaker, Minouk J., additional, and Wagenius, Gunnar, additional
- Published
- 2024
- Full Text
- View/download PDF
3. Real-World Treatment Patterns and Survival Outcomes for Patients with Non-Metastatic Non-Small-Cell Lung Cancer in Sweden: A Nationwide Registry Analysis from the I-O Optimise Initiative
- Author
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Oskarsdottir, Gudrun N., Lampa, Erik, Berglund, Anders, Rosengren, Linda, Ulvestad, Maria, Boros, Miklos, Daumont, Melinda J., Rault, Caroline, Emanuel, Gabrielle, Leal, Catia, Schoemaker, Minouk J., Wagenius, Gunnar, Oskarsdottir, Gudrun N., Lampa, Erik, Berglund, Anders, Rosengren, Linda, Ulvestad, Maria, Boros, Miklos, Daumont, Melinda J., Rault, Caroline, Emanuel, Gabrielle, Leal, Catia, Schoemaker, Minouk J., and Wagenius, Gunnar
- Abstract
Simple Summary: Non-small-cell lung cancer (NSCLC) is the leading cause of cancer-related death worldwide, with almost half of all patients diagnosed with non-metastatic disease (stage IA-IIIC). The treatment options for patients with NSCLC are evolving rapidly, and survival outcomes have improved since the introduction of immunotherapies and targeted treatments in the non-metastatic setting. In this study, we explored treatment patterns and outcomes for patients with non-metastatic NSCLC in Sweden prior to the availability of these treatments. Patient outcomes were comparable with those reported in other real-world studies; however, the prognosis for patients with NSCLC, particularly at higher disease stages, remained poor. These results provide a baseline upon which to evaluate the effectiveness of immunotherapies and targeted treatments as they are introduced into routine clinical practice, including for patients in the non-metastatic setting. Non-small-cell lung cancer (NSCLC) is the leading cause of cancer-related death worldwide, with similar to 40-50% of patients diagnosed with non-metastatic disease (stages IA-IIIC). The treatment landscape is evolving rapidly as immunotherapies and targeted therapy are introduced in the non-metastatic setting, creating a need to assess patient outcomes prior to their introduction. This real-world study using Swedish National Lung Cancer Registry data examined outcomes (overall survival (OS) and time to next treatment or death (TTNTD)) and treatment patterns for adults diagnosed with non-metastatic NSCLC. Baseline characteristics and OS from diagnosis were described for all patients; OS, treatment patterns, and TTNTD from treatment start were described for the treatment subgroup (patients diagnosed from 2014 onwards), stratified by disease stage and initial treatment. OS and TTNTD were described using the Kaplan-Meier estimator. The overall population (2008-2019) included 17,433 patients; the treatment subgroup included 5147, Funding Agencies|Bristol Myers Squibb
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- 2024
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4. A successful shift from thoracotomy to video-assisted thoracoscopic lobectomy for non-small cell lung cancer in a low-volume center
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Asbjornsson, Viktor, primary, Johannsdottir, Gyda, additional, Myer, Daniel, additional, Runarsson, Thorri Geir, additional, Heitmann, Leon Arnar, additional, Oskarsdottir, Gudrun N, additional, Silverborn, Per Martin, additional, Hansen, Henrik Jessen, additional, and Gudbjartsson, Tomas, additional
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- 2024
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5. Smoking during pregnancy : A population-based study
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OSKARSDOTTIR, GUDRUN NINA, SIGURDSSON, HEDINN, and GUDMUNDSSON, KRISTJAN G.
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- 2017
6. Real-world analysis of MET exon 14 mutations in non-small cell lung cancer: a retrospective study from two Swedish hospitals
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Skribek, Marcus, primary, Brunnström, Hans, additional, Oskarsdottir, Gudrun, additional, Portu Grivé, Mikel, additional, Aricak, Ozan, additional, Planck, Maria, additional, Jatta, Kenbugul, additional, Naserhojati, Homeyra, additional, Haglund de Flon, Felix, additional, and Ekman, Simon, additional
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- 2023
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7. Prevalence, molecular markers, and outcome of bronchial squamous carcinoma in situ in high‐risk subjects
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Jonsson, Steinn, primary, Franklin, Wilbur A., additional, Varella‐Garcia, Marileila, additional, Kennedy, Timothy C., additional, Merrick, Daniel, additional, Matney, Kathryn D., additional, Oskarsdottir, Gudrun N., additional, Saemundsson, Arni, additional, Keith, Robert L., additional, Bunn, Paul A., additional, and Miller, York E., additional
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- 2023
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8. Resection Rate and Outcome of Pulmonary Resections for Non–Small-Cell Lung Cancer: A Nationwide Study From Iceland
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Thorsteinsson, Hunbogi, Alexandersson, Asgeir, Oskarsdottir, Gudrun N., Skuladottir, Rut, Isaksson, Helgi J., Jonsson, Steinn, and Gudbjartsson, Tomas
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- 2012
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9. Primary adenocarcinoma of the lung – histological subtypes and outcome after surgery, using the IASLC/ATS/ERS classification of lung adenocarcinoma
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Oskarsdottir, Gudrun Nina, Bjornsson, Johannes, Jonsson, Steinn, Isaksson, Helgi J, and Gudbjartsson, Tomas
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- 2016
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10. A gene expression-based single sample predictor of lung adenocarcinoma molecular subtype and prognosis
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Liljedahl, Helena, Karlsson, Anna, Oskarsdottir, Gudrun N., Salomonsson, Annette, Brunnström, Hans, Erlingsdottir, Gigja, Jönsson, Mats, Isaksson, Sofi, Arbajian, Elsa, Ortiz-Villalón, Cristian, Hussein, Aziz, Bergman, Bengt, Vikström, Anders, Monsef, Nastaran, Branden, Eva, Koyi, Hirsh, de Petris, Luigi, Patthey, Annika, Behndig, Annelie F., Johansson, Mikael, Planck, Maria, Staaf, Johan, Liljedahl, Helena, Karlsson, Anna, Oskarsdottir, Gudrun N., Salomonsson, Annette, Brunnström, Hans, Erlingsdottir, Gigja, Jönsson, Mats, Isaksson, Sofi, Arbajian, Elsa, Ortiz-Villalón, Cristian, Hussein, Aziz, Bergman, Bengt, Vikström, Anders, Monsef, Nastaran, Branden, Eva, Koyi, Hirsh, de Petris, Luigi, Patthey, Annika, Behndig, Annelie F., Johansson, Mikael, Planck, Maria, and Staaf, Johan
- Abstract
Disease recurrence in surgically treated lung adenocarcinoma (AC) remains high. New approaches for risk stratification beyond tumor stage are needed. Gene expression-based AC subtypes such as the Cancer Genome Atlas Network (TCGA) terminal-respiratory unit (TRU), proximal-inflammatory (PI) and proximal-proliferative (PP) subtypes have been associated with prognosis, but show methodological limitations for robust clinical use. We aimed to derive a platform independent single sample predictor (SSP) for molecular subtype assignment and risk stratification that could function in a clinical setting. Two-class (TRU/nonTRU=SSP2) and three-class (TRU/PP/PI=SSP3) SSPs using the AIMS algorithm were trained in 1655 ACs (n = 9659 genes) from public repositories vs TCGA centroid subtypes. Validation and survival analysis were performed in 977 patients using overall survival (OS) and distant metastasis-free survival (DMFS) as endpoints. In the validation cohort, SSP2 and SSP3 showed accuracies of 0.85 and 0.81, respectively. SSPs captured relevant biology previously associated with the TCGA subtypes and were associated with prognosis. In survival analysis, OS and DMFS for cases discordantly classified between TCGA and SSP2 favored the SSP2 classification. In resected Stage I patients, SSP2 identified TRU-cases with better OS (hazard ratio [HR] = 0.30; 95% confidence interval [CI] = 0.18-0.49) and DMFS (TRU HR = 0.52; 95% CI = 0.33-0.83) independent of age, Stage IA/IB and gender. SSP2 was transformed into a NanoString nCounter assay and tested in 44 Stage I patients using RNA from formalin-fixed tissue, providing prognostic stratification (relapse-free interval, HR = 3.2; 95% CI = 1.2-8.8). In conclusion, gene expression-based SSPs can provide molecular subtype and independent prognostic information in early-stage lung ACs. SSPs may overcome critical limitations in the applicability of gene signatures in lung cancer.
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- 2021
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- View/download PDF
11. A gene expression‐based single sample predictor of lung adenocarcinoma molecular subtype and prognosis
- Author
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Liljedahl, Helena, primary, Karlsson, Anna, additional, Oskarsdottir, Gudrun N., additional, Salomonsson, Annette, additional, Brunnström, Hans, additional, Erlingsdottir, Gigja, additional, Jönsson, Mats, additional, Isaksson, Sofi, additional, Arbajian, Elsa, additional, Ortiz‐Villalón, Cristian, additional, Hussein, Aziz, additional, Bergman, Bengt, additional, Vikström, Anders, additional, Monsef, Nastaran, additional, Branden, Eva, additional, Koyi, Hirsh, additional, Petris, Luigi, additional, Patthey, Annika, additional, Behndig, Annelie F., additional, Johansson, Mikael, additional, Planck, Maria, additional, and Staaf, Johan, additional
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- 2020
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12. Improved long-term survival following pulmonary resections for non-small cell lung cancer: results of a nationwide study from Iceland
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Halldorsson, Hannes, primary, Orrason, Andri Wilberg, additional, Oskarsdottir, Gudrun Nina, additional, Petursdottir, Astridur, additional, Mar Fridriksson, Bjorn, additional, Magnusson, Magnus Karl, additional, Jonsson, Steinn, additional, and Gudbjartsson, Tomas, additional
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- 2019
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13. Outcomes following pulmonary resections for lung cancer in Iceland - survival in subgroups of patients
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Oskarsdottir, Gudrun Nina, Tómas Guðbjartsson, Læknadeild (HÍ), Faculty of Medicine (UI), Heilbrigðisvísindasvið (HÍ), School of Health Sciences (UI), Háskóli Íslands, and University of Iceland
- Subjects
Elderly ,Survival ,Lungnakrabbamein ,Lífslíkur ,Aldraðir ,Lung cancer surgery ,Lobectomy ,Doktorsritgerðir ,Adenocarcinoma ,Skurðlækningar ,Surgical resection rate - Abstract
Lung cancer is the third most common type of cancer and the prime cause of cancer-related deaths in Iceland. As surgical resection is the only well-defined and well-studied curative treatment, the aim is to offer surgery to as many patients as possible who have resectable disease. However, less than one-quarter of the patients (most often non-small cell lung carcinoma, NSCLC) are diagnosed at the early stages and thus are candidates for surgery. The most common surgical procedure is lobectomy, but in some cases a sublobar resection (wedge or segment resection) is performed or pneumonectomy is required. The most common histological type of lung cancer is adenocarcinom (AC), followed by squamous cell carcinoma (SCC) and large cell carcinoma (LCC). The short- and long-term outcomes of pulmonary resections for NSCLC have improved over the past years, and even if the total 5-year survival of lung cancer is less than 20%, the survival of patients with resectable localized disease can be up to 80%. This thesis is based on four peer-reviewed papers (I-IV) and the aim was to investigate four key issues: (1) to investigate the surgical resection rate for lung cancer surgery in a whole nation; (2) to determine short- and long-term outcomes of surgery, with special emphasis on patients who underwent lobectomy, had AC separately, or were elderly (>75 years); (3) to determine whether the international IASLC/ATS/ERS adenocarcinoma classification system from 2011 predicts survival in surgical patients with lung cancer in Iceland; and (4) to determine how many patients aged >75 years underwent pulmonary resection and to determine the reasons for the operation not being performed in patients with resectable disease. Three separate registries were used to identify cases. The histology database from the Department of Pathology at Landspitali University Hospital and the diagnosis and operation registry at Landspitali were used to identify patients who underwent surgery for NSCLC, and the Icelandic Cancer Registry was used to find patients who were not operated on. Clinical information was gathered from hospital charts and surgical records, and entered into a data sheet. Survival was analyzed using the Kaplan-Meier method and multivariate Cox analysis was used to evaluate possible independent prognostic factors of survival. All four studies were retrospective, population-based nationwide studies. In paper I, all 404 cases (397 patients) who underwent pulmonary resections for NSCLC in Iceland during 15 years (1994-2008) were studied. The surgical resection rate was 26.4% and 8.7% had major operative complications. The 30-day mortality rate was 1% and the 5-year overall survival was 40.7%. Patients who did not undergo surgical resection had a 5-year survival of 4.8% compared to 12.4% for all lung cancer patients combined. Paper II involved 489 consecutive patients who underwent lobectomy for NSCLC in Iceland from 1991-2014. The 30-day mortality was 0.6% and 4.7% had a major complication postoperatively. The 5-year overall survival was 49.2% and the 3-year survival improved from 48.3% in the period 1991-1994 to 72.8% in 2011-2014 (p=0.0004). Similar improvement was observed in 5-year survival, but 3-year survival was chosen for comparison due to shorter follow-up during the last 4-year period. Paper III described the outcome of 285 patients with resected primary AC of the lung in Iceland 1991-2010, and their subclassification according to the IASLC/ATS/ERS adenocarcinoma classification from 2011. The most common AC subtype was acinar-predominant (46%), followed by solid-predominant with mucin production (23%) and lepidic-predominant (20%). At 5 years, the overall survival was 45.3% and no difference was found in survival between the histological subtypes. The histological subtype was not found to be an independent predictor of overall survival (p = 0.7), in contrast to several studies that have reported more favourable survival for certain subtypes of ACs. Paper IV was a retrospective study on the surgical resection rate and outcome in elderly patients (>75 years old) who had a pulmonary resection for NSCLC in Iceland between 1991 and 2014. The elderly patients were compared with younger patients (, Lungnakrabbamein er þriðja algengasta krabbameinið á Íslandi og það krabbamein sem leggur flesta Íslendinga af velli. Sjúklingar læknast sjaldnast án skurðaðgerðar og því er markmiðið að beita skurðaðgerð hjá sem flestum sjúklingum þegar ábending er til staðar. Skurðmeðferð kemur hinsvegar eingöngu til greina hjá þeim sjúklingum sem eru með staðbundið lungnakrabbamein og vefjagerðin ekki smáfrumukrabbamein. Algengasta vefjagerð þeirra sem gangast undir skurðaðgerð er kirtilfrumukrabbamein en flöguþekju- og stórfrumukrabbamein koma þar á eftir. Algengasta skurðaðgerðin er blaðnám en stundum er beitt fleyg- eða geiraskurði ellegar lungnabrottnámi. Skammtíma- og langtímaárangur skurðaðgerða við lungnakrabbameini hefur batnað á síðustu árum og þrátt fyrir að innan við fimmti hver lungnakrabbameinssjúklingur læknist í heildina þá er fimm ára lifun þeirra sjúklinga sem gangast undir skurðaðgerð vegna staðbundins æxlis í lunganu allt að 80%. Þessi doktorsritgerð tekur til fjögurra vísindagreina (I-IV) þar sem markmiðin voru fjórskipt. Í fyrsta lagi var leitast við að reikna hlutfall sjúklinga með lungnakrabbamein sem gengust undir skurðaðgerð hjá heilli þjóð. Í öðru lagi að meta skammtíma- og langtímaárangur þessara aðgerða með sérstakri áherslu á afdrif sjúklinga sem gengust undir blaðnám, en einnig á afdrif þeirra sem höfðu kirtilfrumukrabbamein eða voru aldraðir (≥75 ára). Í þriðja lagi var markmiðið að meta hvort alþjóðlega flokkun IASLC/ATS/ERS á kirtilfrumukrabbameinum frá árinu 2011 spái fyrir um lifun þessara sjúklinga. Í fjórða lagi að kanna hversu margir sjúklingar eldri en 75 ára gengust undir skurðagerð og af hverju sjúklingar sem taldir voru með skurðtækan sjúkdóm gengust ekki undir aðgerð. Sjúklingar voru fundnir í þremur aðskildum skráningarkerfum. Sjúklingar sem gengust undir aðgerð voru fundnir í rafrænni aðgerðarskrá Landspítala og gagnagrunni rannsóknastofu Landspítala í meinafræði. Upplýsingar um sjúklinga sem ekki gengust undir skurðaðgerð voru fengnar úr krabbameinsskrá Krabbameinsfélags Íslands. Sjúkraskrár og aðgerðarlýsingar voru skoðaðar og klínískar upplýsingar um sjúklinga skráðar rafrænt. Lifun var metin með aðferð Kaplan-Meier og forspárþættir lifunar metnir með fjölþáttagreiningu Cox. Allar rannsóknirnar fjórar voru afturskyggnar og lýðgrundaðar. Grein I tók til 397 sjúklinga sem gengust undir 404 skurðaðgerðir við lungnakrabbameini á Íslandi frá árinu 1994 til ársins 2008. Á öllu tímabilinu var hlutfall þeirra sem gengust undir skurðaðgerð 26,4% og 8,7% fengu alvarlega fylgikvilla í kjölfar aðgerðar. Dánartíðni innan 30 daga frá aðgerð var 1% og 5 ára heildarlifun reyndist 40,7%. Sjúklingar sem ekki gengust undir skurðaðgerð höfðu iv 4,8% fimm ára lifun og fyrir alla lungnakrabbameinssjúklinga í heildina var lifunin 12,4%. Grein II tók til 489 sjúklinga sem gengust undir blaðnám við lungnakrabbameini á Íslandi á árunum 1991-2014. Dánartíðni innan 30 daga var 0,6% og 4,7% fengu alvarlega fylgikvilla. Heildarlifun fimm árum frá aðgerð var 49,2% og þriggja ára lifun jókst frá 48,3% á árunum 1991-1994 í 72,8% á árunum 2011-2014 (p = 0,0004). Svipuð aukning í lifun sást einnig fimm árum frá aðgerð en skemmri eftirlitstími á síðasta tímabilinu gerir samanburð á þriggja ára lifun áreiðanlegri. Grein III lýsti árangri aðgerða hjá 285 sjúklingum með kirtilfrumukrabbamein sem gengust undir lungnaskurðaðgerð á árunum 1991-2010 og undirflokkun þeirra samkvæmt IASLC/ATS/ERS flokkuninni frá árinu 2011. Algengasta vefjaundirgerðin reyndist vera þrúgufrumu (acinar) ríkjandi kirtilfrumukrabbamein (46%), þar á eftir þétt (solid) ríkjandi kirtilfrumukrabbamein með slímmyndun (23%) og hreisturlík (lepidic) ríkjandi kirtilfrumukrabbamein (20%). Fimm ára lifun var 45,3%. Ekki sást marktækur munur á lifun eftir undirgerðum kirtilfrumukrabbameins og IASLC/ATS/ERS flokkunin reyndist ekki vera sjálfstæður forspárþáttur lifunar í fjölþáttagreiningu líkt og sumar erlendar rannsóknir hafi sýnt. Í grein IV var fjallað um aldraða einstaklinga (≥ 75 ára) sem greindust með lungnakrabbamein af ekki smáfrumugerð. Hlutfall þeirra sem gengust undir skurðaðgerð og árangur aðgerða var borinn saman við yngri sjúklinga sem gengust undir skurðaðgerð. Skurðhlutfall hjá öldruðum reyndist 18% borið saman við 32% hjá þeim yngri (p < 0,001). Hvorki reyndist marktækur munur á fylgikvillum né 30 daga dánartíðni milli hópanna. Algengustu ástæður þess að sjúklingar voru ekki teknir í aðgerð þrátt fyrir skurðtækan sjúkdóm reyndust ófullnægjandi lungnastarfsemi (58%), hjartasjúkdómur (17%) og margþætt önnur heilsufarsvandamál (17%). Heildarlifun var betri fyrir yngri hópinn en þann eldri (40% sbr. 44%, p = 0,019) en ekki reyndist munur á krabbameinssértækri lifun (51% sbr. 50%, p = 0,8). Samantekið þá er hlutfall sjúklinga sem gangast undir skurðaðgerð vegna lungnakrabbameins hátt hér á landi. Skammtímaárangur þessara aðgerða er góður og tíðni alvarlegra fylgikvilla og 30 daga dánartíðni lág. Að frátöldum árangri eftir lungnabrottnám eru langtímalífshorfur sjúklinga svipaðar og í erlendum rannsóknum og lífshorfur fara batnandi.
- Published
- 2017
14. Resection rate and operability of elderly patients with non-small cell lung cancer: Nationwide study from 1991 to 2014
- Author
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Baldvinsson, Kristjan, primary, Oskarsdottir, Gudrun Nina, additional, Orrason, Andri Wilberg, additional, Halldorsson, Hannes, additional, Thorsteinsson, Hunbogi, additional, Sigurdsson, Martin Ingi, additional, Jonsson, Steinn, additional, and Gudbjartsson, Tomas, additional
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- 2017
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15. Smoking during pregnancy: A population-based study
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Oskarsdottir, Gudrun Nina, primary, Sigurdsson, Hedinn, additional, and Gudmundsson, Kristjan G., additional
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- 2016
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16. Primary adenocarcinoma of the lung - histological subtypes and outcome after surgery, using the IASLC/ ATS/ ERS classification of lung adenocarcinoma.
- Author
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Oskarsdottir, Gudrun Nina, Bjornsson, Johannes, Jonsson, Steinn, Isaksson, Helgi J, and Gudbjartsson, Tomas
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- *
MUCINOUS adenocarcinoma , *LUNG cancer , *HISTOLOGY , *MUCINS , *ADENOCARCINOMA - Abstract
Adenocarcinoma is the most common histological type of lung carcinoma. Recently the histologic classification of adenocarcinomas in the lung was modified to better reflect biologic properties and prognosis. We reviewed the histology of all primary lung adenocarcinomas operated on in Iceland during a 20-year period and assessed the impact of histology on survival. This nationwide study included 285 patients (mean age 67 years, 57% female), who underwent resection in Iceland from 1991 to 2010. Tumors were reclassified according to the current IASLC/ ATS/ ERS classification system. Overall survival was estimated by the Kaplan-Meier method and Cox regression analysis used to evaluate prognostic factors of overall mortality. Acinar predominant adenocarcinoma was the most common histological subtype (46%) followed by solid-predominant ( SPA) with mucin production comprised (23%). Non-invasive carcinomas were rare. A difference in survival between the histological adenocarcinoma subtypes was not seen (p = 0.32) and multivariate analysis showed that advanced stage and age predicted worse outcome, but histologic subtyping of adenocarcinoma did not. In this nation-wide study there was not a statistical difference in survival according to adenocarcinoma subtypes and the histological subtype did not predict mortality. Preinvasive and minimally invasive adenocarcinomas were rare. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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17. Modification of fatty acid composition of rat heart lipids by feeding cod liver oil
- Author
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Gudbjarnason, Sigmundur, primary and Oskarsdottir, Gudrun, additional
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- 1977
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18. A gene expression-based single sample predictor of lung adenocarcinoma molecular subtype and prognosis.
- Author
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Liljedahl H, Karlsson A, Oskarsdottir GN, Salomonsson A, Brunnström H, Erlingsdottir G, Jönsson M, Isaksson S, Arbajian E, Ortiz-Villalón C, Hussein A, Bergman B, Vikström A, Monsef N, Branden E, Koyi H, de Petris L, Patthey A, Behndig AF, Johansson M, Planck M, and Staaf J
- Subjects
- Adenocarcinoma of Lung genetics, Adenocarcinoma of Lung mortality, Adenocarcinoma of Lung surgery, Algorithms, Datasets as Topic, Disease-Free Survival, Female, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Humans, Lung surgery, Lung Neoplasms genetics, Lung Neoplasms mortality, Lung Neoplasms surgery, Male, Models, Genetic, Neoplasm Recurrence, Local genetics, Neoplasm Staging, Predictive Value of Tests, Prognosis, Risk Assessment methods, Risk Factors, Adenocarcinoma of Lung diagnosis, Biomarkers, Tumor genetics, Lung pathology, Lung Neoplasms diagnosis, Neoplasm Recurrence, Local epidemiology
- Abstract
Disease recurrence in surgically treated lung adenocarcinoma (AC) remains high. New approaches for risk stratification beyond tumor stage are needed. Gene expression-based AC subtypes such as the Cancer Genome Atlas Network (TCGA) terminal-respiratory unit (TRU), proximal-inflammatory (PI) and proximal-proliferative (PP) subtypes have been associated with prognosis, but show methodological limitations for robust clinical use. We aimed to derive a platform independent single sample predictor (SSP) for molecular subtype assignment and risk stratification that could function in a clinical setting. Two-class (TRU/nonTRU=SSP2) and three-class (TRU/PP/PI=SSP3) SSPs using the AIMS algorithm were trained in 1655 ACs (n = 9659 genes) from public repositories vs TCGA centroid subtypes. Validation and survival analysis were performed in 977 patients using overall survival (OS) and distant metastasis-free survival (DMFS) as endpoints. In the validation cohort, SSP2 and SSP3 showed accuracies of 0.85 and 0.81, respectively. SSPs captured relevant biology previously associated with the TCGA subtypes and were associated with prognosis. In survival analysis, OS and DMFS for cases discordantly classified between TCGA and SSP2 favored the SSP2 classification. In resected Stage I patients, SSP2 identified TRU-cases with better OS (hazard ratio [HR] = 0.30; 95% confidence interval [CI] = 0.18-0.49) and DMFS (TRU HR = 0.52; 95% CI = 0.33-0.83) independent of age, Stage IA/IB and gender. SSP2 was transformed into a NanoString nCounter assay and tested in 44 Stage I patients using RNA from formalin-fixed tissue, providing prognostic stratification (relapse-free interval, HR = 3.2; 95% CI = 1.2-8.8). In conclusion, gene expression-based SSPs can provide molecular subtype and independent prognostic information in early-stage lung ACs. SSPs may overcome critical limitations in the applicability of gene signatures in lung cancer., (© 2020 The Authors. International Journal of Cancer published by John Wiley & Sons Ltd on behalf of Union for International Cancer Control.)
- Published
- 2021
- Full Text
- View/download PDF
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