11 results on '"OD structures"'
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2. Symmetry Analysis of the Complex Polytypism of Layered Rare-Earth Tellurites and Related Selenites: The Case of Introducing Transition Metals
- Author
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Dmitri O. Charkin, Valeri A. Dolgikh, Timofey A. Omelchenko, Yulia A. Vaitieva, Sergey N. Volkov, Dina V. Deyneko, and Sergey M. Aksenov
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polytypism ,OD structures ,rare-earth tellurium oxyhalides ,stacking disorder ,crystal chemistry ,selenites ,Mathematics ,QA1-939 - Abstract
Our systematic explorations of the complex rare earth tellurite halide family have added several new [Ln12(TeO3)12][M6X24] (M = Cd, Mn, Co) representatives containing strongly deficient and disordered metal-halide layers based on transition metal cations. The degree of disorder increases sharply with decrease of M2+ radius and the size disagreements between the cationic [Ln12(TeO3)12]+12 and anionic [M6Cl24]−12 layers. From the crystal chemical viewpoint, this indicates that the families of both rare-earth selenites and tellurites can be further extended; one can expect formation of some more complex structure types, particularly among selenites. Analysis of the polytypism of compounds have been performed using the approach of OD (“order–disorder”) theory.
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- 2022
- Full Text
- View/download PDF
3. Polytypism of Compounds with the General Formula Cs{Al2[TP6O20]} (T = B, Al): OD (Order-Disorder) Description, Topological Features, and DFT-Calculations
- Author
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Sergey M. Aksenov, Alexey N. Kuznetsov, Andrey A. Antonov, Natalia A. Yamnova, Sergey V. Krivovichev, and Stefano Merlino
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OD structures ,polytypism ,polymorphism ,heteropolyhedral framework ,modularity ,topology ,Mineralogy ,QE351-399.2 - Abstract
The crystal structures of compounds with the general formula Cs{[6]Al2[[4]TP6O20]} (where T = Al, B) display order-disorder (OD) character and can be described using the same OD groupoid family. Their structures are built up by two kinds of nonpolar layers, with the layer symmetries Pc(n)2 (L2n+1-type) and Pc(a)m (L2n-type) (category IV). Layers of both types (L2n and L2n+1) alternate along the b direction and have common translation vectors a and c (a ~ 10.0 Å, c ~ 12.0 Å). All ordered polytypes as well as disordered structures can be obtained using the following partial symmetry operators that may be active in the L2n type layer: the 21 screw axis parallel to c [– – 21] or inversion centers and the 21 screw axis parallel to a [21 – –]. Different sequences of operators active in the L2n type layer ([– – 21] screw axes or inversion centers and [21 – –] screw axes) define the formation of multilayered structures with the increased b parameter, which are considered as non-MDO polytypes. The microporous heteropolyhedral MT-frameworks are suitable for the migration of small cations such as Li+, Na+ Ag+. Compounds with the general formula Rb{[6]M3+[[4]T3+P6O20]} (M = Al, Ga; T = Al, Ga) are based on heteropolyhedral MT-frameworks with the same stoichiometry as in Cs{[6]Al2[[4]TP6O20]} (where T = Al, B). It was found that all the frameworks have common natural tilings, which indicate the close relationships of the two families of compounds. The conclusions are supported by the DFT calculation data.
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- 2021
- Full Text
- View/download PDF
4. Polytypism of Compounds with the General Formula Cs{Al 2 [ T P 6 O 20 ]} (T = B, Al): OD (Order-Disorder) Description, Topological Features, and DFT-Calculations.
- Author
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Aksenov, Sergey M., Kuznetsov, Alexey N., Antonov, Andrey A., Yamnova, Natalia A., Krivovichev, Sergey V., and Merlino, Stefano
- Subjects
- *
CRYSTAL structure , *SCREWS , *FAMILY relations , *STOICHIOMETRY - Abstract
The crystal structures of compounds with the general formula Cs{[6]Al2[[4]TP6O20]} (where T = Al, B) display order-disorder (OD) character and can be described using the same OD groupoid family. Their structures are built up by two kinds of nonpolar layers, with the layer symmetries Pc(n)2 (L2n+1-type) and Pc(a)m (L2n-type) (category IV). Layers of both types (L2n and L2n+1) alternate along the b direction and have common translation vectors a and c (a ~ 10.0 Å, c ~ 12.0 Å). All ordered polytypes as well as disordered structures can be obtained using the following partial symmetry operators that may be active in the L2n type layer: the 21 screw axis parallel to c [– – 21] or inversion centers and the 21 screw axis parallel to a [21 – –]. Different sequences of operators active in the L2n type layer ([– – 21] screw axes or inversion centers and [21 – –] screw axes) define the formation of multilayered structures with the increased b parameter, which are considered as non-MDO polytypes. The microporous heteropolyhedral MT-frameworks are suitable for the migration of small cations such as Li+, Na+ Ag+. Compounds with the general formula Rb{[6]M3+[[4]T3+P6O20]} (M = Al, Ga; T = Al, Ga) are based on heteropolyhedral MT-frameworks with the same stoichiometry as in Cs{[6]Al2[[4]TP6O20]} (where T = Al, B). It was found that all the frameworks have common natural tilings, which indicate the close relationships of the two families of compounds. The conclusions are supported by the DFT calculation data. [ABSTRACT FROM AUTHOR]
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- 2021
- Full Text
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5. Symmetry Description of OD Crystal Structures in Group Theoretical Terms.
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Grell, Juliana
- Abstract
OD structures of layers are the geometric models of a certain class of crystal structures – so-called polytypes – with local order and generally global disorder. The set of all partial and total symmetry operations of an OD structure does not form a space group, but a groupoid. Here a group-theoretical ansatz is made for an OD symmetry description showing the relation between the set of symmetry operations of an OD structure and some symmetry groups which is based on considerations of cosets and double cosets with respect to the symmetry groups of certain periodic parts of the structure. [ABSTRACT FROM AUTHOR]
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- 1998
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6. Crystal structure of 2Mand 1Apolytypes of balangeroite
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Giovanni Ferraris, Stefano Merlino, and Elena Bonaccorsi
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Chain silicate ,Balangeroite ,Chemistry ,Crystal chemistry ,Space group ,Crystal structure ,Polytypes ,Triclinic crystal system ,Condensed Matter Physics ,Inorganic Chemistry ,Crystallography ,Octahedron ,General Materials Science ,Hydrate ,(Mg ,OD structures ,Fe) hydrate silicate ,Monoclinic crystal system - Abstract
Balangeroite, with ideal crystal chemical for- mula (Mg,Fe)42O6(Si4O12)4(OH)40, displays two MDO polytypes, balangeroite-2M (a ¼ 19.179, b ¼ 9.601, c ¼ 19.218 A ˚ , b ¼ 90.52 � ; space group P2/n) and balan- geroite-1A (a ¼ 9.602, b ¼ 13.891, c ¼ 14.012 A ˚ , a ¼ 86.99 � , b ¼ 76.79 � , g ¼ 76.67 � ; space group P � Both polytypes are built up by octahedral walls 3 � 1, octahedral bundles 2 � 2 and four-repeat silicate chains. All these modules run parallel to the 9.6 Aaxis (b and a in the monoclinic and triclinic polytype, respectively). The distinguishing features between the two polytypes are in the different positioning of the silicate chains, which gives rise to distinct cells and space groups.
- Published
- 2012
7. Brochantite, Cu4SO4(OH)6: OD character, polytypism and crystal structures
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Stefano Merlino, Natale Perchiazzi, and David Franco
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Diffraction ,Materials science ,2M1 and 2M2 polytypes ,Structure refinement ,engineering.material ,Crystallography ,Character (mathematics) ,Geochemistry and Petrology ,engineering ,Brochantite ,Symmetry (geometry) ,2M1 and 2M2 polytypes, Brochantite, OD structures, Structure refinement ,OD structures ,Monoclinic crystal system - Abstract
Single-crystal X-ray diffraction studies of brochantite demonstrate its Order-Disorder (OD) character. The OD structures of the brochantite family can be described as built up by equivalent OD layers with symmetry Pn2 1 m. Two MDO polytypes are possible in this family, and both have been identified in specimens of brochantite from various localities. The MDO 1 polytype corresponds to “normal” brochantite P12 1 /a 1 , a = 13.140(2) A, b = 9.863(2), c = 6.024(1), β = 103.16(3)°, whereas the newly discovered MDO 2 polytype is monoclinic, P2 1 /n11, a = 12.776(2) A, b = 9.869(2), c = 6.026(1), α = 90.15(3)°. Given their polytypic relationships, the two MDO 1 and MDO 2 polytypes can be designated as brochantite-2M 1 and brochantite-2M 2 , respectively. The refined structure (R 1 = 0.049) of brochantite-2M 1 substantially agrees with the model of Cocco & Mazzi (1959) and confirms the assignment of the OH bands due to Schmidt & Lutz (1993). On the basis of the OD relationships between the two polytypes, a structural model for the newly discovered 2M 2 polytype was derived and subsequently refined up to R 1 = 0.062.
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- 2003
8. Fiedlerite: revised chemical formula [Pb3Cl4F(OH)·H2O], OD description and crystal structure refinement of the two MDO polytypes
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Stefano Merlino, Natale Perchiazzi, and Marco Pasero
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crystal structure ,010504 meteorology & atmospheric sciences ,Chemistry ,Stereochemistry ,fiedlerite-1A ,lead halides ,Crystal system ,fiedlerite-2M ,Space group ,Structural formula ,Crystal structure ,Triclinic crystal system ,010502 geochemistry & geophysics ,01 natural sciences ,Chemical formula ,Crystallography ,Geochemistry and Petrology ,Order (group theory) ,OD structures ,chemical data ,Chemical composition ,0105 earth and related environmental sciences - Abstract
The chemical formula of fiedlerite, a rare hydrated lead halide, has been revised. The mineral is now known to contain also fluorine, and the new, correct formula is Pb3Cl4F(OH)·H2O. X-ray diffraction studies on fiedlerite from Laurion, Greece (the type locality), and from Baratti, Italy (the second known occurrence), revealed its Order-Disorder (OD) character. All structures within this OD family can be built up by layers of the same kind. The two polytypes with Maximum Degree of Order (MDO) display triclinic and monoclinic symmetry, with one and two OD layers, respectively, in the unit cell. On these grounds the nomenclature of fiedlerite has been revised, and the mineral is designated together with the polytype suffix (i.e. fiedlerite-1A, fiedlerite-2M). The crystal structures of the two MDO polytypes of fiedlerite have been solved and refined: fiedlerite-1A: P, a = 8.574(3) Å, b = 8.045(4), c = 7.276(2), α = 89.96(4)° β = 102.05(4), γ = 103.45(4), R = 0.092; fiedlerite-2M: P21/a, a = 16.681(4) Å, b = 8.043(3), c = 7.281(2), β = 102.56(4)°, R = 0.061. In both structures Pb is eight-coordinated by different ligands [CI−, F−, (OH)−, H2O] that define bicapped trigonal prisms.
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- 1994
9. Does mathematical crystallography still have a role in the XXI century?
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Massimo Nespolo, Cristallographie, Résonance Magnétique et Modélisations (CRM2), and Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)
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topology ,graph theory ,02 engineering and technology ,twins ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Crystallography ,Theoretical physics ,Development (topology) ,theoretical crystallography ,Structural Biology ,Keywords: Mathematical crystallography ,[CHIM.CRIS]Chemical Sciences/Cristallography ,polytypes ,Symmetry (geometry) ,0210 nano-technology ,Topology (chemistry) ,OD structures ,Mathematics ,symmetry - Abstract
Acta Crystallographica Section A : http://journals.iucr.org/a/journalhomepage.html; International audience; Mathematical crystallography is the branch of crystallography dealing specifically with the fundamental properties of symmetry and periodicity of crystals, topological properties of crystal structures, twins, modular and modulated structures, polytypes and OD structures, as well as the symmetry aspects of phase transitions and physical properties of crystals. Mathematical crystallography has had its most evident success with the development of the theory of space groups, at the end of the XIX century; since then, it has greatly enlarged its applications, but crystallographers are not always familiar with the developments that followed, partly because the applications sometimes require some additional background that the structural crystallographer doe not always possess (it is the case, for example, of graph theory). The knowledge offered by mathematical crystallography is at present only partly mirrored in the International Tables for Crystallography and is sometimes still enshrined in more specialistic texts and publications. To cover this communication gap is one of the tasks of the IUCr Commission on Mathematical and Theoretical Crystallography (MaThCryst).
- Published
- 2007
10. Effects of the stacking faults on the calculated electron density of mica polytypes - The Ďurovič effect
- Author
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Giovanni Ferraris, Massimo Nespolo, Cristallographie, Résonance Magnétique et Modélisations (CRM2), Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL), Dipartimento di Scienze Mineralogiche e Petrologiche (DSMP), Università degli studi di Torino (UNITO), and Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS)
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Diffraction ,Electron density ,010504 meteorology & atmospheric sciences ,Stacking ,Geometry ,Polytypes ,Stacking faults ,010502 geochemistry & geophysics ,01 natural sciences ,Streaking ,micas ,Matrix (mathematics) ,symbols.namesake ,Geochemistry and Petrology ,[CHIM.CRIS]Chemical Sciences/Cristallography ,OD structures ,0105 earth and related environmental sciences ,Chemistry ,Disordered structures ,Structure refinement ,Scale factor ,Crystallography ,Fourier transform ,symbols ,Mica ,[SDU.STU.MI]Sciences of the Universe [physics]/Earth Sciences/Mineralogy - Abstract
International audience; The occurrence of residues in the Fourier map of OD structures (polytypes in which pairs of building modules are geometrically equivalent) in the positions of the 'virtual atoms' of the corresponding family structure derives from the presence of stacking faults inside an otherwise ordered (periodic) matrix. These residues are commonly spurious peaks deriving from the refinement of the structure with a single scale factor for both the family and the non-family reflections, which may be instead on a different scale because of the different peak shape and background characterizing the two types of reflections, resulting in broadening and streaking of the non-family reflections. The 'virtual atoms' occur in the same positions of the atoms corresponding to the stacking faults, but the spurious peaks are in a quantitative relation with them only if the stacking faults diffract coherently. The case of mica polytypes is illustrated also with the aid of examples taken from the literature.
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- 2001
11. OD structures and polytypes
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Slavomil Ďurovič and Zdenĕk Weiss
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Physics ,OD structures ,polytypes ,symmetry ,orpiment ,vibrational spectra ,Crystallography ,structures OD ,polytype ,spectre de vibration ,symétrie ,General Earth and Planetary Sciences ,General Environmental Science ,Vibrational spectra - Abstract
A review article containing in its first part a short summary of the most important terms, definitions and logical principles of the theory of OD (order-disorder) structures by Dornberger-Schiff. It is concluded that the OD theory is a symmetry theory of polytypic structures. A few selected examples in the second part : phyllosilicates, ZnS, SiC, TaS2, orpiment, and γ-Hg3S2Cl2 demonstrate the use of the OD apparatus in the investigation of polytypic substances ; in particular the high abstraction power of the OD approach, the concept of MDO polytypes (polytypes with maximum degree of order), the explanation of unexpected vibrational spectra, and the notion of desymmetrization., Article de revue contenant en première partie un bref rappel des points les plus importants, définitions et principes logiques de la théorie des structures OD (ordre-désordre) de Dornberger-Schiff. On conclut que la théorie OD est une théorie de symétrie des structures polytypiques. Dans la seconde partie quelques exemples choisis : phyllosilicates, ZnS, SiC, TaS2, orpiment et Hg3 S2Cl2 - γ démontrent l'utilisation de l'outil OD pour l'étude des substances polytypiques ; en particulier le fort pouvoir d'abstraction de l'approche OD, le concept de polytypes MDO (polytypes avec maximum degré d'ordre), l'explication de spectres de vibration inattendus et la notion de désymétrisation., Ďurovič Slavomil, Weiss Zdenĕk. OD structures and polytypes. In: Bulletin de Minéralogie, volume 109, 1-2, 1986. Polytypes.
- Published
- 1986
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