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Excessive truncation of a population's size structure is often identified as an important deleterious effect of exploitation, yet the effect on population persistence of size-structure truncation caused by exploitation is often not quantified due to data limitations. In this study, we estimate changes in eggs per recruit (EPR)using annual length-frequency samples over a 9 year period to assess persistence of the two most important recreational fishes in southern Angola: west coast dusky kob (Argyrosomus coronus) and leerfish (Lichia amia). Using a length-and age-structured model, we improve on an existing method to fit this type of model to length-frequency data and estimate EPR. The objectives of the methodological changes are to add flexibility and robustness to the approach for assessing population status in data-limited situations. Results indicate that dusky kob presents very low levels of EPR (5%-10% of the per recruit reproductive capacity in the absence of fishing) in 2013, whereas large inter-annual variability in leerfish estimates suggest caution must be applied when drawing conclusions about its exploitation status. Using simulated length frequency data with known parameter values, we demonstrate that recruitment decline due to overexploitation leads to overestimation of EPR values. Considering the low levels of EPR estimated for the study species, recruitment limitation is not impossible and true EPR values may be even lower than our estimates. It is, therefore, likely that management action, such as the creation of Marine Protected Areas, is needed to reconstitute the west coast dusky kob population.

Marine reserves are expected to benefit a wide range of species, but most models used to evaluate their effects assume that adults are sedentary, thereby potentially overestimating population persistence. Many nearshore marine organisms move within a home range as adults, and there is a need to understand the effects of this type of movement on reserve performance. We incorporated movement within a home range into a spatially explicit marine reserve model in order to assess the combined effects of adult and larval movement on persistence and yield in a general, strategic framework. We describe how the capacity of a population to persist decreased with increasing home range size in a manner that depended on whether the sedentary case was maintained by self persistence or network persistence. Self persistence declined gradually with increasing home range and larval dispersal distance, while network persistence decreased sharply to 0 above a threshold home range and was less dependent on larval dispersal distance. The maximum home range size protected by a reserve network increased with the fraction of coastline in reserves and decreasing exploitation rates outside reserves. Spillover due to movement within a home range contributed to yield moderately under certain conditions, although yield contributions were generally not as large as those from spillover due to larval dispersal. Our results indicate that, for species exhibiting home range behavior, persistence in a network of marine reserves may be more predictable than previously anticipated from models based solely on larval dispersal, in part due to better knowledge of home range sizes. Including movement within a home range can change persistence results significantly from those assuming that adults are sedentary; hence it is an important consideration in reserve design.

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Poly(ADP-ribose) polymerase (PARP) is a multifunctional nuclear zinc finger protein which participates in the immediate response of mammalian cells exposed to DNA damaging agents. Given the complexity of the poly(ADP-ribosylation) reaction, we developed a large-scale screening procedure in Escherichia coli to identify randomly amino acids involved in the various aspects of this mechanism. Random mutations were generated by the polymerase chain reaction in a cDNA sequence covering most of the catalytic domain. Out of 26 individual mutations that diversely inactivated the full-length PARP, 22 were found at conserved positions in the primary structure, and 24 were located in the core domain formed by two beta-sheets containing the active site. Most of the PARP mutants were altered in poly(ADP-ribose) elongation and/or branching. The spatial proximity of some residues involved in chain elongation (E988) and branching (Y986) suggests a proximity or a superposition of these two catalytic sites. Other residues affected in branching were located at the surface of the molecule (R847, E923, G972), indicating that protein-protein contacts are necessary for optimal polymer branching. This screening procedure provides a simple and efficient method to explore further the structure-function relationship of the enzyme.