143 results on '"Nytko, Katarzyna J'
Search Results
2. Triple combination of lomustine, temozolomide and irradiation reduces canine glioma cell survival in vitro
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Daniel Fuchs, Carla Rohrer Bley, Luca Morandi, Caterina Tonon, Mathias S. Weyland, and Katarzyna J. Nytko
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brain tumour ,chemoradiation ,dog ,in vitro ,O‐6‐methylguanine‐DNA methyltransferase (MGMT) ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Background Combined chemoradiation offers a promising therapeutic strategy for dogs with glioma. The alkylating agents temozolomide (TMZ) and lomustine (CCNU) penetrate the blood‐brain barrier, and doses for dogs are established. Whether such combinations are clinically advantageous remains to be explored together with tumour‐specific markers. Objective To investigate if triple combination of lomustine, temozolomide and irradiation reduces canine glioma cell survival in vitro. Methods We evaluated the sensitising effect of CCNU alone and in combination with TMZ‐irradiation in canine glioma J3T‐BG cells and long‐term drug‐exposed subclones by using clonogenic survival and proliferation assays. Bisulphite‐SEQ and Western Blot were used to investigate molecular alterations. Results TMZ (200 μM) or CCNU alone (5 μM) reduced the irradiated survival fraction (4 Gy) from 60% to 38% (p = 0.0074) and 26% (p = 0.0002), respectively. The double‐drug combination reduced the irradiated survival fraction (4 Gy) more potently to 12% (p < 0.0001). After long‐term drug exposure, both subclones show higher IC50 values against CCNU and TMZ. For CCNU‐resistant cells, both, single‐drug CCNU (p = 0.0006) and TMZ (p = 0.0326) treatment combined with irradiation (4 Gy) remained effective. The double‐drug‐irradiation combination reduced the cell survival by 86% (p < 0.0001), compared to 92% in the parental (nonresistant) cell line. For TMZ‐resistant cells, only the double‐drug combination with irradiation (4 Gy) reduced the cell survival by 88% (p = 0.0057) while single‐drug treatment lost efficacy. Chemoresistant cell lines demonstrated higher P‐gp expression while MGMT‐methylation profile analysis showed a general high methylation level in the parental and long‐term treated cell lines. Conclusions Our findings indicate that combining CCNU with TMZ‐irradiation significantly reduces canine glioma cell survival. Such a combination could overcome current challenges of therapeutic resistance to improve overall patient survival.
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- 2023
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3. Temozolomide is additive with cytotoxic effect of irradiation in canine glioma cell lines
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Nina Simona Tresch, Daniel Fuchs, Luca Morandi, Caterina Tonon, Carla Rohrer Bley, and Katarzyna J. Nytko
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brain tumour ,chemoradiation ,dog ,in vitro ,O‐6‐methylguanine‐DNA methyltransferase (MGMT) ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Background Similar to human glioblastoma patients, glial tumours in dogs have high treatment resistance and a guarded prognosis. In human medicine, the addition of temozolomide to radiotherapy leads to a favourable outcome in vivo as well as a higher antiproliferative effect on tumour cells in vitro. Objectives The aim of the study was to determine the radio‐ and temozolomide‐sensitivity of three canine glial tumour cell lines and to investigate a potential additive cytotoxic effect in combined treatment. Additionally, we wanted to detect the level of MGMT promoter methylation in these cell lines and to investigate a potential association between MGMT promoter methylation and treatment resistance. Methods Cells were treated with various concentrations of temozolomide and/or irradiated with 4 and 8 Gy. Radiosensitization by temozolomide was evaluated using proliferation assay and clonogenic assay, and MGMT DNA methylation was investigated using bisulfite next‐generation sequencing. Results In all tested canine cell lines, clonogenicity was inhibited significantly in combined treatment compared to radiation alone. All canine glial cell lines tested in this study were found to have high methylation levels of MGMT promoter. Conclusions Hence, an additive effect of combined treatment in MGMT negative canine glial tumour cell lines in vitro was detected. This motivates to further investigate the association between treatment resistance and MGMT, such as MGMT promoter methylation status.
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- 2021
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4. Correction to: Elevated circulating Hsp70 levels are correlative for malignancies in different mammalian species
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Salvermoser, Lukas, Flisikowski, Krzysztof, Dressel-Böhm, Susann, Nytko, Katarzyna J., Bley, Carla Rohrer, Schnieke, Angelika, Samt, Ann-Kathrin, Thölke, Dennis, Lennartz, Philipp, Schwab, Melissa, Wang, Fei, Dezfouli, Ali Bashiri, and Multhoff, Gabriele
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- 2023
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5. Methadone does not potentiate the effect of doxorubicin in canine tumour cell lines
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Claudia Cueni, Katarzyna J. Nytko, Pauline Thumser‐Henner, Mathias S. Weyland, and Carla Rohrer Bley
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µ‐receptor ,buprenorphine ,cancer ,dogs ,flow cytometry ,opioid receptor ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Opioid receptor activation was shown to enhance the efficacy of anti‐neoplastic drugs in several human cancer cell lines. In these cell lines, doxorubicin increased the number of opioid receptors and methadone concurrently enhanced cellular doxorubicin uptake. Triggered through lay press and media, animal owners started to challenge veterinary oncologists with questions about methadone use in anti‐cancer therapy. Especially in veterinary medicine, where side effects of chemotherapy are tolerated to a lesser extent and hence smaller doses are given, agents potentiating chemotherapeutic agents would be an optimal approach to treatment. Canine transitional cell carcinoma cells (TCC, K9TCC), canine osteosarcoma cells (OSA, Abrams) and canine hemangiosarcoma cells (HSA, DAL‐4) were incubated with different combinations of methadone, buprenorphine and doxorubicin, in order to test inhibition of cell proliferation. Opioid receptor density was assessed with fluorescence‐activated cell sorting in drug native and doxorubicin pretreated cells. In TCC and OSA cell lines opioid receptor density increased after doxorubicin pretreatment. In combination treatment, however, we did not find significant potentiation of doxorubicin's inhibitory effect on proliferation in these cell lines. Neither was there a significant increase of the effect of doxorubicin when the opioids were added 24 hr before doxorubicin. Hence, we could not confirm the hypothesis that opioids increase the anti‐proliferative effect of the anti‐neoplastic drug doxorubicin in any of these canine tumour cell lines. The lack of effect on a cellular level does not warrant a clinical approach to use opioids together with doxorubicin in dogs with cancer.
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- 2020
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6. Mutations of BRCA2 in canine mammary tumors and their targeting potential in clinical therapy
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Pauline Thumser-Henner, Katarzyna J. Nytko, and Carla Rohrer Bley
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Canine mammary cancer ,BRCA2 ,PARP inhibitors ,RAD51 ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Dogs develop cancer spontaneously with age, with breed-specific risk underlying differences in genetics. Mammary tumors are reported as the most frequent neoplasia in intact female dogs. Their high prevalence in certain breeds suggests a genetic component, as it is the case in human familial breast cancer, distinctly in BRCA2-associated cancers. However, the molecular genetics of BRCA2 in the pathogenesis of canine cancer are still under investigation. Genetic variations of canine BRCA2 comprised single nucleotide polymorphisms, insertions and deletions. The BRCA2 level has been shown to be reduced in tumor gland samples, suggesting that low expression of BRCA2 is contributing to mammary tumor development in dogs. Additionally, specific variations of the BRCA2 gene affect RAD51 binding strength, critically damage the BRCA2-RAD51 binding and further provoke a defective repair. In humans, preclinical and clinical data revealed a synthetic lethality interaction between BRCA2 mutations and PARP inhibition. PARP inhibitors are successfully used to increase chemo- and radiotherapy sensitivity, although they are also associated with numerous side effects and acquired resistance. Cancer treatment of canine patients could benefit from increased chemo- and radiosensitivity, as their cancer therapy protocols usually include only low doses of drugs or radiation. Early investigations show tolerability of iniparib in dogs. PARP inhibitors also imply higher therapy costs and consequently are less likely to be accepted by pet owners. We summarized the current evidence of canine BRCA2 gene alterations and their association with mammary tumors. Mutations in the canine BRCA2 gene have the potential to be exploited in clinical therapy through the usage of PARP inhibitors. However, further investigations are needed before introducing PARP inhibitors in veterinary clinical practice.
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- 2020
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7. Triple combination of lomustine, temozolomide and irradiation reduces canine glioma cell survival in vitro
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Fuchs, Daniel, primary, Rohrer Bley, Carla, additional, Morandi, Luca, additional, Tonon, Caterina, additional, Weyland, Mathias S., additional, and Nytko, Katarzyna J., additional
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- 2023
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8. The novel microtubule targeting agent BAL101553 in combination with radiotherapy in treatment-refractory tumor models
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Sharma, Ashish, Broggini-Tenzer, Angela, Vuong, Van, Messikommer, Alessandra, Nytko, Katarzyna J., Guckenberger, Matthias, Bachmann, Felix, Lane, Heidi A., and Pruschy, Martin
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- 2017
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9. Role of HSP70 in response to (thermo)radiotherapy: analysis of gene expression in canine osteosarcoma cells by RNA-seq
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Nytko, Katarzyna J., Thumser-Henner, Pauline, Russo, Giancarlo, Weyland, Mathias S., and Rohrer Bley, Carla
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- 2020
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10. Mutations of BRCA2 in canine mammary tumors and their targeting potential in clinical therapy
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Thumser-Henner, Pauline, Nytko, Katarzyna J., and Rohrer Bley, Carla
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- 2020
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11. Elevated circulating Hsp70 levels are correlative for malignancies in different mammalian species
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Salvermoser, Lukas, Flisikowski, Krzysztof, Dressel-Böhm, Susann, Nytko, Katarzyna J, Rohrer Bley, Carla, Schnieke, Angelika, Samt, Ann-Kathrin, Thölke, Dennis, Lennartz, Philipp, Schwab, Melissa, Wang, Fei, Bashiri Dezfouli, Ali, Multhoff, Gabriele, University of Zurich, and Salvermoser, Lukas
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1307 Cell Biology ,10253 Department of Small Animals ,1303 Biochemistry ,630 Agriculture ,570 Life sciences ,biology ,Cell Biology ,Biochemistry - Abstract
Circulating Hsp70 levels were determined in feline and porcine cohorts using two different ELISA systems. These comparative animal models of larger organisms often reflect diseases, and especially malignant tumors, better than conventional rodent models. It is therefore essential to investigate the biology and utility of tumor biomarkers in animals such as cats and pigs. In this study, levels of free Hsp70 in the blood of cats with spontaneously occurring tumors were detected using a commercial Hsp70 ELISA (R&D Systems). Sub-analysis of different tumor groups revealed that animals with tumors of epithelial origin presented with significantly elevated circulating Hsp70 concentrations. In addition to free Hsp70 levels measured with the R&D Systems Hsp70 ELISA, levels of exosomal Hsp70 were determined using the compHsp70 ELISA in pigs. Both ELISA systems detected significantly elevated Hsp70 levels (R&D Systems: median 24.9 ng/mL; compHsp70: median 44.2 ng/mL) in the blood of a cohort of APC1311/+ pigs diagnosed with high-grade adenoma polyps, and the R&D Systems Hsp70 ELISA detected also elevated Hsp70 levels in animals with low-grade polyps. In contrast, in flTP53R167H pigs, suffering from malignant osteosarcoma, the compHsp70 ELISA (median 674.32 ng/mL), but not the R&D Systems Hsp70 ELISA (median 4.78 ng/mL), determined significantly elevated Hsp70 concentrations, indicating that in tumor-bearing animals, the dominant form of Hsp70 is of exosomal origin. Our data suggest that both ELISA systems are suitable for detecting free circulating Hsp70 levels in pigs with high-grade adenoma, but only the compHsp70 ELISA can measure elevated, tumor-derived exosomal Hsp70 levels in tumor-bearing animals.
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- 2022
12. Figure S6 from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Gulati, Pratiksha, primary, Rühl, Julia, primary, Kannan, Abhilash, primary, Pircher, Magdalena, primary, Schuberth, Petra, primary, Nytko, Katarzyna J., primary, Pruschy, Martin, primary, Sulser, Simon, primary, Haefner, Mark, primary, Jensen, Shawn, primary, Soltermann, Alex, primary, Jungraithmayr, Wolfgang, primary, Eisenring, Maya, primary, Winder, Thomas, primary, Samaras, Panagiotis, primary, Tabor, Annett, primary, Stenger, Rene, primary, Stupp, Roger, primary, Weder, Walter, primary, Renner, Christoph, primary, Münz, Christian, primary, and Petrausch, Ulf, primary
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- 2023
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13. supplementary figure legends from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Gulati, Pratiksha, primary, Rühl, Julia, primary, Kannan, Abhilash, primary, Pircher, Magdalena, primary, Schuberth, Petra, primary, Nytko, Katarzyna J., primary, Pruschy, Martin, primary, Sulser, Simon, primary, Haefner, Mark, primary, Jensen, Shawn, primary, Soltermann, Alex, primary, Jungraithmayr, Wolfgang, primary, Eisenring, Maya, primary, Winder, Thomas, primary, Samaras, Panagiotis, primary, Tabor, Annett, primary, Stenger, Rene, primary, Stupp, Roger, primary, Weder, Walter, primary, Renner, Christoph, primary, Münz, Christian, primary, and Petrausch, Ulf, primary
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- 2023
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14. supplementary notes from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Gulati, Pratiksha, primary, Rühl, Julia, primary, Kannan, Abhilash, primary, Pircher, Magdalena, primary, Schuberth, Petra, primary, Nytko, Katarzyna J., primary, Pruschy, Martin, primary, Sulser, Simon, primary, Haefner, Mark, primary, Jensen, Shawn, primary, Soltermann, Alex, primary, Jungraithmayr, Wolfgang, primary, Eisenring, Maya, primary, Winder, Thomas, primary, Samaras, Panagiotis, primary, Tabor, Annett, primary, Stenger, Rene, primary, Stupp, Roger, primary, Weder, Walter, primary, Renner, Christoph, primary, Münz, Christian, primary, and Petrausch, Ulf, primary
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- 2023
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15. Table S1 from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Gulati, Pratiksha, primary, Rühl, Julia, primary, Kannan, Abhilash, primary, Pircher, Magdalena, primary, Schuberth, Petra, primary, Nytko, Katarzyna J., primary, Pruschy, Martin, primary, Sulser, Simon, primary, Haefner, Mark, primary, Jensen, Shawn, primary, Soltermann, Alex, primary, Jungraithmayr, Wolfgang, primary, Eisenring, Maya, primary, Winder, Thomas, primary, Samaras, Panagiotis, primary, Tabor, Annett, primary, Stenger, Rene, primary, Stupp, Roger, primary, Weder, Walter, primary, Renner, Christoph, primary, Münz, Christian, primary, and Petrausch, Ulf, primary
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- 2023
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16. Elevated circulating Hsp70 levels are correlative for malignancies in different mammalian species
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Salvermoser, Lukas; https://orcid.org/0000-0001-7878-4245, Flisikowski, Krzysztof; https://orcid.org/0000-0001-5599-8558, Dressel-Böhm, Susann; https://orcid.org/0000-0002-1102-7458, Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Schnieke, Angelika; https://orcid.org/0000-0002-5761-9635, Samt, Ann-Kathrin, Thölke, Dennis, Lennartz, Philipp, Schwab, Melissa, Wang, Fei, Bashiri Dezfouli, Ali, Multhoff, Gabriele, Salvermoser, Lukas; https://orcid.org/0000-0001-7878-4245, Flisikowski, Krzysztof; https://orcid.org/0000-0001-5599-8558, Dressel-Böhm, Susann; https://orcid.org/0000-0002-1102-7458, Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Schnieke, Angelika; https://orcid.org/0000-0002-5761-9635, Samt, Ann-Kathrin, Thölke, Dennis, Lennartz, Philipp, Schwab, Melissa, Wang, Fei, Bashiri Dezfouli, Ali, and Multhoff, Gabriele
- Abstract
Circulating Hsp70 levels were determined in feline and porcine cohorts using two different ELISA systems. These comparative animal models of larger organisms often reflect diseases, and especially malignant tumors, better than conventional rodent models. It is therefore essential to investigate the biology and utility of tumor biomarkers in animals such as cats and pigs. In this study, levels of free Hsp70 in the blood of cats with spontaneously occurring tumors were detected using a commercial Hsp70 ELISA (R&D Systems). Sub-analysis of different tumor groups revealed that animals with tumors of epithelial origin presented with significantly elevated circulating Hsp70 concentrations. In addition to free Hsp70 levels measured with the R&D Systems Hsp70 ELISA, levels of exosomal Hsp70 were determined using the compHsp70 ELISA in pigs. Both ELISA systems detected significantly elevated Hsp70 levels (R&D Systems: median 24.9 ng/mL; compHsp70: median 44.2 ng/mL) in the blood of a cohort of APC$^{1311/+}$ pigs diagnosed with high-grade adenoma polyps, and the R&D Systems Hsp70 ELISA detected also elevated Hsp70 levels in animals with low-grade polyps. In contrast, in flTP53$^{R167H}$ pigs, suffering from malignant osteosarcoma, the compHsp70 ELISA (median 674.32 ng/mL), but not the R&D Systems Hsp70 ELISA (median 4.78 ng/mL), determined significantly elevated Hsp70 concentrations, indicating that in tumor-bearing animals, the dominant form of Hsp70 is of exosomal origin. Our data suggest that both ELISA systems are suitable for detecting free circulating Hsp70 levels in pigs with high-grade adenoma, but only the compHsp70 ELISA can measure elevated, tumor-derived exosomal Hsp70 levels in tumor-bearing animals.
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- 2023
17. Temozolomide is additive with cytotoxic effect of irradiation in canine glioma cell lines
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Carla Rohrer Bley, Caterina Tonon, Nina Simona Tresch, Katarzyna J. Nytko, Daniel Fuchs, Luca Morandi, University of Zurich, Nytko, Katarzyna J, Tresch N.S., Fuchs D., Morandi L., Tonon C., Rohrer Bley C., and Nytko K.J.
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10253 Department of Small Animals ,Veterinary medicine ,3400 General Veterinary ,Cell Line ,Dogs ,In vivo ,SF600-1100 ,O-6-methylguanine-DNA methyltransferase (MGMT) ,Temozolomide ,medicine ,Animals ,Humans ,Cytotoxic T cell ,Dog Diseases ,11434 Center for Clinical Studies ,brain tumour ,chemoradiation ,Clonogenic assay ,DNA Modification Methylases ,neoplasms ,630 Agriculture ,General Veterinary ,Brain Neoplasms ,Chemistry ,Tumor Suppressor Proteins ,in vitro ,Original Articles ,Glioma ,Methylation ,digestive system diseases ,Dacarbazine ,O‐6‐methylguanine‐DNA methyltransferase (MGMT) ,DNA Repair Enzymes ,Cell culture ,Canine Glioma ,dog ,DNA methylation ,Cancer research ,570 Life sciences ,biology ,Original Article ,medicine.drug - Abstract
Background Similar to human glioblastoma patients, glial tumours in dogs have high treatment resistance and a guarded prognosis. In human medicine, the addition of temozolomide to radiotherapy leads to a favourable outcome in vivo as well as a higher antiproliferative effect on tumour cells in vitro. Objectives The aim of the study was to determine the radio‐ and temozolomide‐sensitivity of three canine glial tumour cell lines and to investigate a potential additive cytotoxic effect in combined treatment. Additionally, we wanted to detect the level of MGMT promoter methylation in these cell lines and to investigate a potential association between MGMT promoter methylation and treatment resistance. Methods Cells were treated with various concentrations of temozolomide and/or irradiated with 4 and 8 Gy. Radiosensitization by temozolomide was evaluated using proliferation assay and clonogenic assay, and MGMT DNA methylation was investigated using bisulfite next‐generation sequencing. Results In all tested canine cell lines, clonogenicity was inhibited significantly in combined treatment compared to radiation alone. All canine glial cell lines tested in this study were found to have high methylation levels of MGMT promoter. Conclusions Hence, an additive effect of combined treatment in MGMT negative canine glial tumour cell lines in vitro was detected. This motivates to further investigate the association between treatment resistance and MGMT, such as MGMT promoter methylation status., Temozolomide pre‐treatment enhanced the cytotoxic effect or irradiation in canine glioma cell lines. Clonogenic cell survival assay was used as a readout.
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- 2021
18. Cell line-specific efficacy of thermoradiotherapy in human and canine cancer cells in vitro.
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Katarzyna J Nytko, Pauline Thumser-Henner, Mathias S Weyland, Stephan Scheidegger, and Carla Rohrer Bley
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Medicine ,Science - Abstract
ObjectiveAims were to investigate sensitivity of various human and canine cancer cell lines to hyperthermia and the influence of particular treatment conditions, and to analyze the DNA-damage response and mode of cell death in cell line radiosensitized by hyperthermia. Additionally, we were interested in the involvement of HSP70 in radiosensitization.MethodsRadiosensitization by hyperthermia was determined in a panel of human and canine cancer cell lines using clonogenic cell survival assay, as well as levels of heat shock proteins (HSPs) using immunoblotting. The influence of the hyperthermia-radiotherapy time gap, different temperatures and the order of treatments on clonogenicity of hyperthermia-sensitive A549 cells was investigated. Additionally, DNA damage and cell death were assessed by Comet assay and an apoptosis/necrosis assay. Further we induced transient knockdown in A549 cells to test HSP70's involvement in radiosensitization.ResultsOut of eight cell lines tested, only two (A549 and Abrams) showed significant decrease in clonogenic cell survival when pre-treated with hyperthermia at 42°C. Strong induction of HSP70 upon thermoradiotherapy (HT-RT) treatment was found in all cell lines. Transient knockdown of HSP70 in A549 cells did not result in decrease of clonogenic cell survival in response to HT-RT.ConclusionTumor cell-type, temperature and order of treatment play an important role in radiosensitization by hyperthermia. However, hyperthermia has limited potency to radiosensitize canine cancer cells grown in a 2D cell culture setting presented here. DNA damage and apoptosis/necrosis did not increase upon combined treatment and cytosolic levels of HSP70 appear not to play critical role in the radiosensitization of A549 cells.
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- 2019
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19. supplementary notes from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Ulf Petrausch, Christian Münz, Christoph Renner, Walter Weder, Roger Stupp, Rene Stenger, Annett Tabor, Panagiotis Samaras, Thomas Winder, Maya Eisenring, Wolfgang Jungraithmayr, Alex Soltermann, Shawn Jensen, Mark Haefner, Simon Sulser, Martin Pruschy, Katarzyna J. Nytko, Petra Schuberth, Magdalena Pircher, Abhilash Kannan, Julia Rühl, and Pratiksha Gulati
- Abstract
Supplementary Materials and Methods, References
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- 2023
20. Figure S2 from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Ulf Petrausch, Christian Münz, Christoph Renner, Walter Weder, Roger Stupp, Rene Stenger, Annett Tabor, Panagiotis Samaras, Thomas Winder, Maya Eisenring, Wolfgang Jungraithmayr, Alex Soltermann, Shawn Jensen, Mark Haefner, Simon Sulser, Martin Pruschy, Katarzyna J. Nytko, Petra Schuberth, Magdalena Pircher, Abhilash Kannan, Julia Rühl, and Pratiksha Gulati
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Flow chart of transcriptome profiling after antigen-specific stimulation of redirected T cells with different co-stimulations
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- 2023
21. Table S1 from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Ulf Petrausch, Christian Münz, Christoph Renner, Walter Weder, Roger Stupp, Rene Stenger, Annett Tabor, Panagiotis Samaras, Thomas Winder, Maya Eisenring, Wolfgang Jungraithmayr, Alex Soltermann, Shawn Jensen, Mark Haefner, Simon Sulser, Martin Pruschy, Katarzyna J. Nytko, Petra Schuberth, Magdalena Pircher, Abhilash Kannan, Julia Rühl, and Pratiksha Gulati
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List of differentially regulated cell cycle genes with Log2FC values.
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- 2023
22. supplementary figure legends from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Ulf Petrausch, Christian Münz, Christoph Renner, Walter Weder, Roger Stupp, Rene Stenger, Annett Tabor, Panagiotis Samaras, Thomas Winder, Maya Eisenring, Wolfgang Jungraithmayr, Alex Soltermann, Shawn Jensen, Mark Haefner, Simon Sulser, Martin Pruschy, Katarzyna J. Nytko, Petra Schuberth, Magdalena Pircher, Abhilash Kannan, Julia Rühl, and Pratiksha Gulati
- Abstract
supplementary figure legends
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- 2023
23. Data from Aberrant Lck Signal via CD28 Costimulation Augments Antigen-Specific Functionality and Tumor Control by Redirected T Cells with PD-1 Blockade in Humanized Mice
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Ulf Petrausch, Christian Münz, Christoph Renner, Walter Weder, Roger Stupp, Rene Stenger, Annett Tabor, Panagiotis Samaras, Thomas Winder, Maya Eisenring, Wolfgang Jungraithmayr, Alex Soltermann, Shawn Jensen, Mark Haefner, Simon Sulser, Martin Pruschy, Katarzyna J. Nytko, Petra Schuberth, Magdalena Pircher, Abhilash Kannan, Julia Rühl, and Pratiksha Gulati
- Abstract
Purpose: Combination therapy of adoptively transferred redirected T cells and checkpoint inhibitors aims for higher response rates in tumors poorly responsive to immunotherapy like malignant pleural mesothelioma (MPM). Only most recently the issue of an optimally active chimeric antigen receptor (CAR) and the combination with checkpoint inhibitors is starting to be addressed.Experimental Design: Fibroblast activation protein (FAP)–specific CARs with different costimulatory domains, including CD28, Δ-CD28 (lacking lck binding moiety), or 4-1BB were established. CAR-T cells were characterized in vitro and antitumor efficacy was tested in vivo in a humanized mouse model in combination with PD-1 blockade. Finally, the Δ-CD28 CAR was tested clinically in a patient with MPM.Results: All the three CARs demonstrated FAP-specific functionality in vitro. Gene expression data indicated a distinct activity profile for the Δ-CD28 CAR, including higher expression of genes involved in cell division, glycolysis, fatty acid oxidation, and oxidative phosphorylation. In vivo, only T cells expressing the Δ-CD28 CAR in combination with PD-1 blockade controlled tumor growth. When injected into the pleural effusion of a patient with MPM, the Δ-CD28 CAR could be detected for up to 21 days and showed functionality.Conclusions: Overall, anti-FAP-Δ-CD28/CD3ζ CAR T cells revealed superior in vitro functionality, better tumor control in combination with PD-1 blockade in humanized mice, and persistence up to 21 days in a patient with MPM. Therefore, further clinical investigation of this optimized CAR is warranted. Clin Cancer Res; 24(16); 3981–93. ©2018 AACR.
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- 2023
24. Correction to: Elevated circulating Hsp70 levels are correlative for malignancies in different mammalian species
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Salvermoser, Lukas, primary, Flisikowski, Krzysztof, additional, Dressel-Böhm, Susann, additional, Nytko, Katarzyna J., additional, Bley, Carla Rohrer, additional, Schnieke, Angelika, additional, Samt, Ann-Kathrin, additional, Thölke, Dennis, additional, Lennartz, Philipp, additional, Schwab, Melissa, additional, Wang, Fei, additional, Dezfouli, Ali Bashiri, additional, and Multhoff, Gabriele, additional
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- 2022
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25. Role of HSP70 in response to (thermo)radiotherapy : analysis of gene expression in canine osteosarcoma cells by RNA-seq
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Nytko, Katarzyna J., Thumser-Henner, Pauline, Russo, Giancarlo, Weyland, Mathias S., Rohrer Bley, Carla, Nytko, Katarzyna J., Thumser-Henner, Pauline, Russo, Giancarlo, Weyland, Mathias S., and Rohrer Bley, Carla
- Abstract
Pre-treatment of tumors with hyperthermia is often used to increase the efficacy of radiotherapy. One of the main proteins induced in response to hyperthermia is heat shock protein 70 (HSP70). The aim of our study was to investigate up- and down-regulated genes in response to (thermo)radiotherapy in HSP70 proficient and deficient canine osteosarcoma cell line (Abrams), and functional role of HSP70 in the mechanism of thermoradiosensitization. Cells were transfected with negative control siRNA or siRNA targeting HSP70 and treated with hyperthermia (HT), radiotherapy (RT), and thermoradiotherapy (HTRT). RNA sequencing was used to analyze gene expression. Hyperthermia and thermoradiotherapy, but not radiotherapy alone, induced differential gene expression. We identified genes differentially expressed only in HSP70 knockdown (thus HSP70-dependent) cells in response to hyperthermia and thermoradiotherapy. Interestingly, cell proliferation but not clonogenicity and apoptosis/necrosis was affected by the HSP70 knockdown in response to thermoradiotherapy. The results suggest that HSP70 regulates expression of specific genes in response to hyperthermia and thermoradiotherapy. Further investigations into the role of specific genes regulated in a HSP70-dependent manner in response to thermoradiotherapy could pave a way into new, combinatorial treatment options for (canine) osteosarcoma and other cancer types.
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- 2022
26. Methadone does not potentiate the effect of doxorubicin in canine tumour cell lines
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Cueni, Claudia, Nytko, Katarzyna J., Thumser-Henner, Pauline, Weyland, Mathias S., Rohrer Bley, Carla, Cueni, Claudia, Nytko, Katarzyna J., Thumser-Henner, Pauline, Weyland, Mathias S., and Rohrer Bley, Carla
- Abstract
Opioid receptor activation was shown to enhance the efficacy of anti-neoplastic drugs in several human cancer cell lines. In these cell lines, doxorubicin increased the number of opioid receptors and methadone concurrently enhanced cellular doxorubicin uptake. Triggered through lay press and media, animal owners started to challenge veterinary oncologists with questions about methadone use in anti-cancer therapy. Especially in veterinary medicine, where side effects of chemotherapy are tolerated to a lesser extent and hence smaller doses are given, agents potentiating chemotherapeutic agents would be an optimal approach to treatment. Canine transitional cell carcinoma cells (TCC, K9TCC), canine osteosarcoma cells (OSA, Abrams) and canine hemangiosarcoma cells (HSA, DAL-4) were incubated with different combinations of methadone, buprenorphine and doxorubicin, in order to test inhibition of cell proliferation. Opioid receptor density was assessed with fluorescence-activated cell sorting in drug native and doxorubicin pretreated cells. In TCC and OSA cell lines opioid receptor density increased after doxorubicin pretreatment. In combination treatment, however, we did not find significant potentiation of doxorubicin's inhibitory effect on proliferation in these cell lines. Neither was there a significant increase of the effect of doxorubicin when the opioids were added 24 hr before doxorubicin. Hence, we could not confirm the hypothesis that opioids increase the anti-proliferative effect of the anti-neoplastic drug doxorubicin in any of these canine tumour cell lines. The lack of effect on a cellular level does not warrant a clinical approach to use opioids together with doxorubicin in dogs with cancer.
- Published
- 2022
27. Combined Treatment Strategies for Microtubule Stabilizing Agent-Resistant Tumors
- Author
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Broggini-Tenzer, Angela, Sharma, Ashish, Nytko, Katarzyna J., Bender, Sabine, Vuong, Van, Orlowski, Katrin, Hug, Daniel, O’Reilly, Terence, and Pruschy, Martin
- Published
- 2015
- Full Text
- View/download PDF
28. Vitamin C is dispensable for oxygen sensing in vivo
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Nytko, Katarzyna J., Maeda, Nobuyo, Schläfli, Philipp, Spielmann, Patrick, Wenger, Roland H., and Stiehl, Daniel P.
- Published
- 2011
- Full Text
- View/download PDF
29. Correction to: Elevated circulating Hsp70 levels are correlative for malignancies in different mammalian species
- Author
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Lukas Salvermoser, Krzysztof Flisikowski, Susann Dressel-Böhm, Katarzyna J. Nytko, Carla Rohrer Bley, Angelika Schnieke, Ann-Kathrin Samt, Dennis Thölke, Philipp Lennartz, Melissa Schwab, Fei Wang, Ali Bashiri Dezfouli, and Gabriele Multhoff
- Subjects
Cell Biology ,Biochemistry - Published
- 2022
30. Role of HSP70 in response to (thermo)radiotherapy: analysis of gene expression in canine osteosarcoma cells by RNA-seq
- Author
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Mathias S. Weyland, Carla Rohrer Bley, Pauline Thumser-Henner, Giancarlo Russo, Katarzyna J. Nytko, University of Zurich, and Nytko, Katarzyna J
- Subjects
Disease model, animal ,10253 Department of Small Animals ,Vesicular Transport Proteins ,lcsh:Medicine ,Bone neoplasm ,615: Pharmakologie und Therapeutik ,Membrane glycoprotein ,Gene expression ,Dog ,Vesicular transport protein ,Bone cancer ,Cluster Analysis ,RNA-Seq ,11434 Center for Clinical Studies ,RNA, Small Interfering ,lcsh:Science ,Cancer ,Regulation of gene expression ,Gene knockdown ,Osteosarcoma ,Principal Component Analysis ,Multidisciplinary ,Membrane Glycoproteins ,HSP70 heat-shock protein ,Transfection ,Photon ,Gene Expression Regulation, Neoplastic ,Matrix Metalloproteinase 1 ,Hyperthermia ,610 Medicine & health ,Bone Neoplasms ,Biology ,Canine Osteosarcoma ,Article ,Dogs ,medicine ,Animals ,HSP70 Heat-Shock Proteins ,RNA, Messenger ,Cell Proliferation ,1000 Multidisciplinary ,Photons ,11077 Center for Applied Biotechnology and Molecular Medicine ,Radiotherapy ,Animal ,572: Biochemie ,Cell growth ,lcsh:R ,Hyperthermia, Induced ,medicine.disease ,Disease Models, Animal ,Cancer research ,lcsh:Q - Abstract
Pre-treatment of tumors with hyperthermia is often used to increase the efficacy of radiotherapy. One of the main proteins induced in response to hyperthermia is heat shock protein 70 (HSP70). The aim of our study was to investigate up- and down-regulated genes in response to (thermo)radiotherapy in HSP70 proficient and deficient canine osteosarcoma cell line (Abrams), and functional role of HSP70 in the mechanism of thermoradiosensitization. Cells were transfected with negative control siRNA or siRNA targeting HSP70 and treated with hyperthermia (HT), radiotherapy (RT), and thermoradiotherapy (HTRT). RNA sequencing was used to analyze gene expression. Hyperthermia and thermoradiotherapy, but not radiotherapy alone, induced differential gene expression. We identified genes differentially expressed only in HSP70 knockdown (thus HSP70-dependent) cells in response to hyperthermia and thermoradiotherapy. Interestingly, cell proliferation but not clonogenicity and apoptosis/necrosis was affected by the HSP70 knockdown in response to thermoradiotherapy. The results suggest that HSP70 regulates expression of specific genes in response to hyperthermia and thermoradiotherapy. Further investigations into the role of specific genes regulated in a HSP70-dependent manner in response to thermoradiotherapy could pave a way into new, combinatorial treatment options for (canine) osteosarcoma and other cancer types., Scientific Reports, 10 (1), ISSN:2045-2322
- Published
- 2020
31. Temozolomide is additive with cytotoxic effect of irradiation in canine glioma cell lines
- Author
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Tresch, Nina Simona, primary, Fuchs, Daniel, additional, Morandi, Luca, additional, Tonon, Caterina, additional, Rohrer Bley, Carla, additional, and Nytko, Katarzyna J., additional
- Published
- 2021
- Full Text
- View/download PDF
32. Dynamic In Vivo Profiling of DNA Damage and Repair after Radiotherapy Using Canine Patients as a Model
- Author
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Nadine Schulz, Hassan Chaachouay, Katarzyna J. Nytko, Mathias S. Weyland, Malgorzata Roos, Rudolf M. Füchslin, Franco Guscetti, Stephan Scheidegger, and Carla Rohrer Bley
- Subjects
DNA damage repair ,kinetics ,γH2AX-foci ,comet assay ,dog ,radiation ,DNA repair model ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Time resolved data of DNA damage and repair after radiotherapy elucidates the relation between damage, repair, and cell survival. While well characterized in vitro, little is known about the time-course of DNA damage response in tumors sampled from individual patients. Kinetics of DNA damage after radiotherapy was assessed in eight dogs using repeated in vivo samples of tumor and co-irradiated normal tissue analyzed with comet assay and phosphorylated H2AX (γH2AX) immunohistochemistry. In vivo results were then compared (in silico) with a dynamic mathematical model for DNA damage formation and repair. Maximum %DNA in tail was observed at 15–60 min after irradiation, with a rapid decrease. Time-courses of γH2AX-foci paralleled these findings with a small time delay and were not influenced by covariates. The evolutionary parameter search based on %DNA in tail revealed a good fit of the DNA repair model to in vivo data for pooled sarcoma time-courses, but fits for individual sarcoma time-courses suffer from the heterogeneous nature of the in vivo data. It was possible to follow dynamics of comet tail intensity and γH2AX-foci during a course of radiation using a minimally invasive approach. DNA repair can be quantitatively investigated as time-courses of individual patients by integrating this resulting data into a dynamic mathematical model.
- Published
- 2017
- Full Text
- View/download PDF
33. Temozolomide is additive with cytotoxic effect of irradiation in canine glioma cell lines
- Author
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Tresch, Nina Simona; https://orcid.org/0000-0002-6582-6706, Fuchs, Daniel, Morandi, Luca, Tonon, Caterina, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Nytko, Katarzyna J, Tresch, Nina Simona; https://orcid.org/0000-0002-6582-6706, Fuchs, Daniel, Morandi, Luca, Tonon, Caterina, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, and Nytko, Katarzyna J
- Abstract
Background: Similar to human glioblastoma patients, glial tumours in dogs have high treatment resistance and a guarded prognosis. In human medicine, the addition of temozolomide to radiotherapy leads to a favourable outcome in vivo as well as a higher antiproliferative effect on tumour cells in vitro. Objectives: The aim of the study was to determine the radio- and temozolomide-sensitivity of three canine glial tumour cell lines and to investigate a potential additive cytotoxic effect in combined treatment. Additionally, we wanted to detect the level of MGMT promoter methylation in these cell lines and to investigate a potential association between MGMT promoter methylation and treatment resistance. Methods: Cells were treated with various concentrations of temozolomide and/or irradiated with 4 and 8 Gy. Radiosensitization by temozolomide was evaluated using proliferation assay and clonogenic assay, and MGMT DNA methylation was investigated using bisulfite next-generation sequencing. Results: In all tested canine cell lines, clonogenicity was inhibited significantly in combined treatment compared to radiation alone. All canine glial cell lines tested in this study were found to have high methylation levels of MGMT promoter. Conclusions: Hence, an additive effect of combined treatment in MGMT negative canine glial tumour cell lines in vitro was detected. This motivates to further investigate the association between treatment resistance and MGMT, such as MGMT promoter methylation status.
- Published
- 2021
34. Defective nuclear entry of hydrolases prevents neutrophil extracellular trap formation in patients with chronic granulomatous disease
- Author
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Romao, Susana, Puente, Emilio Tejera, Nytko, Katarzyna J., Siler, Ulrich, Münz, Christian, and Reichenbach, Janine
- Published
- 2015
- Full Text
- View/download PDF
35. Congenital erythrocytosis associated with gain-of-function HIF2A gene mutations and erythropoietin levels in the normal range
- Author
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Silverio Perrotta, Daniel P. Stiehl, Francesca Punzo, Saverio Scianguetta, Adriana Borriello, Debora Bencivenga, Maddalena Casale, Bruno Nobili, Silvia Fasoli, Adriana Balduzzi, Lilla Cro, Katarzyna J. Nytko, Roland H. Wenger, and Fulvio Della Ragione
- Subjects
Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Hypoxia-inducible factor 2α (HIF-2α) plays a pivotal role in the balancing of oxygen requirements throughout the body. The protein is a transcription factor that modulates the expression of a wide array of genes and, in turn, controls several key processes including energy metabolism, erythropoiesis and angiogenesis. We describe here the identification of two cases of familial erythrocytosis associated with heterozygous HIF2A missense mutations, namely Ile533Val and Gly537Arg. Ile533Val is a novel mutation and represents the genetic HIF2A change nearest to Pro-531, the primary hydroxyl acceptor residue, so far identified. The Gly537Arg missense mutation has already been described in familial erythrocytosis. However, our patient is the only described case of a de novo HIF2A mutation associated with the development of congenital polycythemia. Functional in vivo studies, based on exogenous expression of hybrid HIF-2α transcription factors, indicated that these genetic alterations lead to the stabilization of HIF-2α protein. All the identified polycythemic subjects with HIF2A mutations show serum erythropoietin in the normal range, independently of the hematocrit values and phlebotomy frequency. The erythroid precursors obtained from the peripheral blood of patients showed an altered phenotype, including an increased rate of growth and a modified expression of some HIF-2α target genes. These results suggest the novel proposal that polycythemia observed in subjects with HIF2A mutations might also be due to primary changes in hematopoietic cells and not only secondary to increased erythropoietin levels.
- Published
- 2013
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- View/download PDF
36. Cell line-specific efficacy of thermoradiotherapy in human and canine cancer cells in vitro
- Author
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Mathias S. Weyland, Katarzyna J. Nytko, Stephan Scheidegger, Carla Rohrer Bley, Pauline Thumser-Henner, University of Zurich, Thamm, Douglas H, and Nytko, Katarzyna J
- Subjects
0301 basic medicine ,10253 Department of Small Animals ,Cancer Treatment ,Apoptosis ,Pathology and Laboratory Medicine ,Biochemistry ,Heat Shock Response ,615: Pharmakologie und Therapeutik ,0302 clinical medicine ,Medicine and Health Sciences ,11434 Center for Clinical Studies ,Cellular Stress Responses ,Multidisciplinary ,Cell Death ,630 Agriculture ,Chemistry ,General Medicine ,Nucleic acids ,Radiation therapy ,Oncology ,Cell Processes ,030220 oncology & carcinogenesis ,Medicine ,General Agricultural and Biological Sciences ,Research Article ,Hyperthermia ,Clinical Oncology ,Programmed cell death ,Science ,Immunoblotting ,Molecular Probe Techniques ,Genetics and Molecular Biology ,1100 General Agricultural and Biological Sciences ,Research and Analysis Methods ,Transfection ,03 medical and health sciences ,Signs and Symptoms ,Gentamicin protection assay ,Diagnostic Medicine ,1300 General Biochemistry, Genetics and Molecular Biology ,medicine ,Genetics ,Heat shock ,Molecular Biology Techniques ,Molecular Biology ,A549 cell ,1000 Multidisciplinary ,Biology and life sciences ,11077 Center for Applied Biotechnology and Molecular Medicine ,DNA ,Cell Biology ,medicine.disease ,Comet assay ,030104 developmental biology ,Cell culture ,General Biochemistry ,Cancer research ,DNA damage ,570 Life sciences ,biology ,Clinical Medicine - Abstract
ObjectiveAims were to investigate sensitivity of various human and canine cancer cell lines to hyperthermia and the influence of particular treatment conditions, and to analyze the DNA-damage response and mode of cell death in cell line radiosensitized by hyperthermia. Additionally, we were interested in the involvement of HSP70 in radiosensitization.MethodsRadiosensitization by hyperthermia was determined in a panel of human and canine cancer cell lines using clonogenic cell survival assay, as well as levels of heat shock proteins (HSPs) using immunoblotting. The influence of the hyperthermia-radiotherapy time gap, different temperatures and the order of treatments on clonogenicity of hyperthermia-sensitive A549 cells was investigated. Additionally, DNA damage and cell death were assessed by Comet assay and an apoptosis/necrosis assay. Further we induced transient knockdown in A549 cells to test HSP70's involvement in radiosensitization.ResultsOut of eight cell lines tested, only two (A549 and Abrams) showed significant decrease in clonogenic cell survival when pre-treated with hyperthermia at 42°C. Strong induction of HSP70 upon thermoradiotherapy (HT-RT) treatment was found in all cell lines. Transient knockdown of HSP70 in A549 cells did not result in decrease of clonogenic cell survival in response to HT-RT.ConclusionTumor cell-type, temperature and order of treatment play an important role in radiosensitization by hyperthermia. However, hyperthermia has limited potency to radiosensitize canine cancer cells grown in a 2D cell culture setting presented here. DNA damage and apoptosis/necrosis did not increase upon combined treatment and cytosolic levels of HSP70 appear not to play critical role in the radiosensitization of A549 cells.
- Published
- 2019
37. Author response for 'Methadone does not potentiate the effect of doxorubicin in canine tumour cell lines'
- Author
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Carla Rohrer Bley, Claudia Cueni, Pauline Thumser-Henner, Katarzyna J. Nytko, and Mathias S. Weyland
- Subjects
business.industry ,Cell culture ,Cancer research ,Medicine ,Doxorubicin ,business ,Methadone ,medicine.drug - Published
- 2020
38. Methadone does not potentiate the effect of doxorubicin in canine tumour cell lines
- Author
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Pauline Thumser-Henner, Katarzyna J. Nytko, Claudia Cueni, Mathias S. Weyland, and Carla Rohrer Bley
- Subjects
Canine Transitional Cell Carcinoma ,dogs ,medicine.drug_class ,medicine.medical_treatment ,Antineoplastic Agents ,Pharmacology ,630: Landwirtschaft ,Opioid receptor ,medicine ,Dog ,Animals ,Doxorubicin ,Flow cytometry ,µ‐receptor ,Cell proliferation ,Cancer ,Chemotherapy ,lcsh:Veterinary medicine ,µ-receptor ,General Veterinary ,Cell growth ,business.industry ,Animal ,Original Articles ,Buprenorphine ,Cell line, tumor ,Opioid ,Antineoplastic agent ,lcsh:SF600-1100 ,Original Article ,business ,Methadone ,medicine.drug - Abstract
Opioid receptor activation was shown to enhance the efficacy of anti‐neoplastic drugs in several human cancer cell lines. In these cell lines, doxorubicin increased the number of opioid receptors and methadone concurrently enhanced cellular doxorubicin uptake. Triggered through lay press and media, animal owners started to challenge veterinary oncologists with questions about methadone use in anti‐cancer therapy. Especially in veterinary medicine, where side effects of chemotherapy are tolerated to a lesser extent and hence smaller doses are given, agents potentiating chemotherapeutic agents would be an optimal approach to treatment. Canine transitional cell carcinoma cells (TCC, K9TCC), canine osteosarcoma cells (OSA, Abrams) and canine hemangiosarcoma cells (HSA, DAL‐4) were incubated with different combinations of methadone, buprenorphine and doxorubicin, in order to test inhibition of cell proliferation. Opioid receptor density was assessed with fluorescence‐activated cell sorting in drug native and doxorubicin pretreated cells. In TCC and OSA cell lines opioid receptor density increased after doxorubicin pretreatment. In combination treatment, however, we did not find significant potentiation of doxorubicin's inhibitory effect on proliferation in these cell lines. Neither was there a significant increase of the effect of doxorubicin when the opioids were added 24 hr before doxorubicin. Hence, we could not confirm the hypothesis that opioids increase the anti‐proliferative effect of the anti‐neoplastic drug doxorubicin in any of these canine tumour cell lines. The lack of effect on a cellular level does not warrant a clinical approach to use opioids together with doxorubicin in dogs with cancer., Triggered through lay press and media, animal owners started to challenge veterinary oncologists with questions about methadone use in anti‐cancer therapy. However, we could not confirm the hypothesis that opioids increase the anti‐proliferative effect of the anti‐neoplastic drug doxorubicin in any of these canine tumor cell lines. The lack of effect on a cellular level does not warrant a clinical approach to use opioids together with doxorubicin in dogs with cancer.
- Published
- 2020
- Full Text
- View/download PDF
39. Holistic View on Cell Survival and DNA Damage: How Model-Based Data Analysis Supports Exploration of Dynamics in Biological Systems
- Author
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Alke Petri-Fink, Rudolf Marcel Füchslin, Pauline Thumser-Henner, Carla Rohrer Bley, Stephan Scheidegger, Mathias S. Weyland, Marco Lattuada, Simone Ulzega, Katarzyna J. Nytko, University of Zurich, and Weyland, Mathias S
- Subjects
10253 Department of Small Animals ,DNA Repair ,Computer science ,Semantics (computer science) ,Model parameters ,030218 nuclear medicine & medical imaging ,0302 clinical medicine ,2604 Applied Mathematics ,2400 General Immunology and Microbiology ,Neoplasms ,11434 Center for Clinical Studies ,Tumor Stem Cell Assay ,Systems Biology ,Applied Mathematics ,Dynamics (mechanics) ,Contrast (statistics) ,General Medicine ,030220 oncology & carcinogenesis ,Modeling and Simulation ,Simulated annealing ,Comet Assay ,Approximate Bayesian computation ,Monte Carlo Method ,Algorithm ,Research Article ,Article Subject ,Cell Survival ,Computer applications to medicine. Medical informatics ,R858-859.7 ,610 Medicine & health ,Genetics and Molecular Biology ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Dogs ,1300 General Biochemistry, Genetics and Molecular Biology ,Modelling and Simulation ,Cell Line, Tumor ,Calibration ,Animals ,Humans ,Cell survival ,11077 Center for Applied Biotechnology and Molecular Medicine ,General Immunology and Microbiology ,572: Biochemie ,Radiotherapy Planning, Computer-Assisted ,Computational Biology ,Bayes Theorem ,Mathematical Concepts ,General Biochemistry ,2611 Modeling and Simulation ,DNA Damage - Abstract
In this work, a method is established to calibrate a model that describes the basic dynamics of DNA damage and repair. The model can be used to extend planning for radiotherapy and hyperthermia in order to include the biological effects. In contrast to “syntactic” models (e.g., describing molecular kinetics), the model used here describes radiobiological semantics, resulting in a more powerful model but also in a far more challenging calibration. Model calibration is attempted from clonogenic assay data (doses of 0–6 Gy) and from time-resolved comet assay data obtained within 6 h after irradiation with 6 Gy. It is demonstrated that either of those two sources of information alone is insufficient for successful model calibration, and that both sources of information combined in a holistic approach are necessary to find viable model parameters. Approximate Bayesian computation (ABC) with simulated annealing is used for parameter search, revealing two aspects that are beneficial to resolving the calibration problem: (1) assessing posterior parameter distributions instead of point-estimates and (2) combining calibration runs from different assays by joining posterior distributions instead of running a single calibration run with a combined, computationally very expensive objective function.
- Published
- 2020
40. Holistic view on cell survival and DNA damage : how model-based data analysis supports exploration of dynamics in biological systems
- Author
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Weyland, Mathias S., Thumser-Henner, Pauline, Nytko, Katarzyna J., Rohrer Bley, Carla, Ulzega, Simone, Petri-Fink, Alke, Lattuada, Marco, Füchslin, Rudolf Marcel, Scheidegger, Stephan, Weyland, Mathias S., Thumser-Henner, Pauline, Nytko, Katarzyna J., Rohrer Bley, Carla, Ulzega, Simone, Petri-Fink, Alke, Lattuada, Marco, Füchslin, Rudolf Marcel, and Scheidegger, Stephan
- Abstract
In this work, a method is established to calibrate a model that describes the basic dynamics of DNA damage and repair. The model can be used to extend planning for radiotherapy and hyperthermia in order to include the biological effects. In contrast to ``syntactic'' models (e.g. describing molecular kinetics), the model used here describes radiobiological semantics, resulting in a more powerful model but also in a far more challenging calibration. Model calibration is attempted from clonogenic assay data (doses of 0 -- 6 Gy) and from time-resolved comet assay data obtained within 6~h after irradiation with 6~Gy. It is demonstrated that either of those two sources of information alone is insufficient for successful model calibration, and that both sources of information combined in a holistic approach are necessary to find viable model parameters. Approximate Bayesian Computation (ABC) with simulated annealing is used for parameter search, revealing two aspects that are beneficial to resolving the calibration problem: (1) assessing posterior parameter distributions instead of point-estimates; (2) combining calibration runs from different assays by joining posterior distributions instead of running a single calibration run with a combined, computationally very expensive objective function.
- Published
- 2020
41. Holistic view on cell survival and DNA damage: how model-based data analysis supports exploration of dynamics in Biological systems
- Author
-
Weyland, Mathias S; https://orcid.org/0000-0001-6389-0029, Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Ulzega, Simone, Petri-Fink, Alke, Lattuada, Marco, Füchslin, Rudolf M, Scheidegger, Stephan; https://orcid.org/0000-0002-2622-2918, Weyland, Mathias S; https://orcid.org/0000-0001-6389-0029, Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Ulzega, Simone, Petri-Fink, Alke, Lattuada, Marco, Füchslin, Rudolf M, and Scheidegger, Stephan; https://orcid.org/0000-0002-2622-2918
- Abstract
In this work, a method is established to calibrate a model that describes the basic dynamics of DNA damage and repair. The model can be used to extend planning for radiotherapy and hyperthermia in order to include the biological effects. In contrast to “syntactic” models (e.g., describing molecular kinetics), the model used here describes radiobiological semantics, resulting in a more powerful model but also in a far more challenging calibration. Model calibration is attempted from clonogenic assay data (doses of 0–6 Gy) and from time-resolved comet assay data obtained within 6 h after irradiation with 6 Gy. It is demonstrated that either of those two sources of information alone is insufficient for successful model calibration, and that both sources of information combined in a holistic approach are necessary to find viable model parameters. Approximate Bayesian computation (ABC) with simulated annealing is used for parameter search, revealing two aspects that are beneficial to resolving the calibration problem: (1) assessing posterior parameter distributions instead of point-estimates and (2) combining calibration runs from different assays by joining posterior distributions instead of running a single calibration run with a combined, computationally very expensive objective function.
- Published
- 2020
42. Role of HSP70 in response to (thermo)radiotherapy: analysis of gene expression in canine osteosarcoma cells by RNA-seq
- Author
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Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Russo, Giancarlo; https://orcid.org/0000-0003-0707-2640, Weyland, Mathias S; https://orcid.org/0000-0001-6389-0029, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Russo, Giancarlo; https://orcid.org/0000-0003-0707-2640, Weyland, Mathias S; https://orcid.org/0000-0001-6389-0029, and Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722
- Abstract
Pre-treatment of tumors with hyperthermia is often used to increase the efficacy of radiotherapy. One of the main proteins induced in response to hyperthermia is heat shock protein 70 (HSP70). The aim of our study was to investigate up- and down-regulated genes in response to (thermo)radiotherapy in HSP70 proficient and deficient canine osteosarcoma cell line (Abrams), and functional role of HSP70 in the mechanism of thermoradiosensitization. Cells were transfected with negative control siRNA or siRNA targeting HSP70 and treated with hyperthermia (HT), radiotherapy (RT), and thermoradiotherapy (HTRT). RNA sequencing was used to analyze gene expression. Hyperthermia and thermoradiotherapy, but not radiotherapy alone, induced differential gene expression. We identified genes differentially expressed only in HSP70 knockdown (thus HSP70-dependent) cells in response to hyperthermia and thermoradiotherapy. Interestingly, cell proliferation but not clonogenicity and apoptosis/necrosis was affected by the HSP70 knockdown in response to thermoradiotherapy. The results suggest that HSP70 regulates expression of specific genes in response to hyperthermia and thermoradiotherapy. Further investigations into the role of specific genes regulated in a HSP70-dependent manner in response to thermoradiotherapy could pave a way into new, combinatorial treatment options for (canine) osteosarcoma and other cancer types.
- Published
- 2020
43. Mutations of BRCA2 in canine mammary tumors and their targeting potential in clinical therapy
- Author
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Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, and Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722
- Abstract
Dogs develop cancer spontaneously with age, with breed-specific risk underlying differences in genetics. Mammary tumors are reported as the most frequent neoplasia in intact female dogs. Their high prevalence in certain breeds suggests a genetic component, as it is the case in human familial breast cancer, distinctly in BRCA2-associated cancers. However, the molecular genetics of BRCA2 in the pathogenesis of canine cancer are still under investigation.Genetic variations of canine BRCA2 comprised single nucleotide polymorphisms, insertions and deletions. The BRCA2 level has been shown to be reduced in tumor gland samples, suggesting that low expression of BRCA2 is contributing to mammary tumor development in dogs. Additionally, specific variations of the BRCA2 gene affect RAD51 binding strength, critically damage the BRCA2-RAD51 binding and further provoke a defective repair. In humans, preclinical and clinical data revealed a synthetic lethality interaction between BRCA2 mutations and PARP inhibition. PARP inhibitors are successfully used to increase chemo- and radiotherapy sensitivity, although they are also associated with numerous side effects and acquired resistance. Cancer treatment of canine patients could benefit from increased chemo- and radiosensitivity, as their cancer therapy protocols usually include only low doses of drugs or radiation. Early investigations show tolerability of iniparib in dogs. PARP inhibitors also imply higher therapy costs and consequently are less likely to be accepted by pet owners.We summarized the current evidence of canine BRCA2 gene alterations and their association with mammary tumors. Mutations in the canine BRCA2 gene have the potential to be exploited in clinical therapy through the usage of PARP inhibitors. However, further investigations are needed before introducing PARP inhibitors in veterinary clinical practice.
- Published
- 2020
44. 32nd Annual Meeting of the European Society for Hyperthermic Oncology
- Author
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Mathias S. Weyland, Katarzyna J. Nytko, Carla Rohrer Bley, Pauline Thumser-Henner, and Stephan Scheidegger
- Subjects
0301 basic medicine ,business.industry ,Phased array ,Imaging phantom ,Compensation (engineering) ,Set (abstract data type) ,03 medical and health sciences ,030104 developmental biology ,Oncology ,Calibration ,Medicine ,Radiology, Nuclear Medicine and imaging ,Antenna (radio) ,Focus (optics) ,business ,Algorithm ,Communication channel - Abstract
Introduction In microwave hyperthermia (MW-HT), treatment planning determines the steering parameters for a phased array to yield appropriate tumor coverage and hot-spot suppression. In real HT systems, however, such arrays are subjected to mismatches, which might not be considered in the models used in treatment planning. While certain mismatches can be addressed via channel calibration, those occurring inside the array are more difficult to predict as they can vary during the treatment session itself. The effect of such mismatches can be as relevant as to disrupt the interference pattern. Objectives This contribution proposes self-calibration (SC) as a solution for real-time compensation of various types of mismatches, such as different cable lengths, manufacturing tolerances, patient misplacement and air bubbles in the water bolus. Two SC algorithms have been designed for use with applicator arrays of arbitrary shapes. Materials & Methods The algorithms are based on comparison of simulated and measured S-matrices of the phased array. The extra time delays caused by various mismatches at each channel are then compensated accordingly. The verification of both algorithms includes virtual and experimental models of our neck applicator used in a setup with a patient model and a muscle phantom. The accuracy has been evaluated numerically by comparing the ideal E-field distributions with those obtained by introducing a set of randomly distributed mismatches to the applicator model. The proof-of-principle has then been demonstrated experimentally by means of temperature measurements. Results Results indicate that at least one of the tested SC algorithms converge to the correct compensation solution with performances largely comparable and sometimes even exceeding those typical of an external calibration. Antenna offsets of ±5 mm and air bubbles about 1 cm big are well handled. Improvements can be done with respect to patient misplacement, which is compensated by the algorithm up to ±1 mm. Experimental results confirm the ability of the algorithm to restore focus shape. Conclusion Self-calibration can be a valid solution for mismatch compensation in MW-HT. The potential real-time application of SC makes it a desirable candidate for use in clinical settings.
- Published
- 2018
45. Vitamin C is not required for oxygen sensing in vivo
- Author
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Nytko, Katarzyna J., Maeda, Nobuyo, Schläfli, Philipp, Spielmann, Patrick, Wenger, Roland H., and Stiehl, Daniel P.
- Published
- 2012
46. Holistic View on Cell Survival and DNA Damage: How Model-Based Data Analysis Supports Exploration of Dynamics in Biological Systems
- Author
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Weyland, Mathias S., primary, Thumser-Henner, Pauline, additional, Nytko, Katarzyna J., additional, Rohrer Bley, Carla, additional, Ulzega, Simone, additional, Petri-Fink, Alke, additional, Lattuada, Marco, additional, Füchslin, Rudolf M., additional, and Scheidegger, Stephan, additional
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- 2020
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47. Methadone does not potentiate the effect of doxorubicin in canine tumour cell lines
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Cueni, Claudia, primary, Nytko, Katarzyna J., additional, Thumser‐Henner, Pauline, additional, Weyland, Mathias S., additional, and Rohrer Bley, Carla, additional
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- 2020
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48. The hypoxia-activated prodrug evofosfamide in combination with multiple regimens of radiotherapy
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Ivo Grgic, Martin Pruschy, Katarzyna J. Nytko, Janosch Ott, Matthias Guckenberger, Sabine Bender, Oliver Riesterer, University of Zurich, and Pruschy, Martin
- Subjects
0301 basic medicine ,Radiobiology ,medicine.medical_treatment ,610 Medicine & health ,P450 oxidoreductase ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Cell Line, Tumor ,medicine ,Carcinoma ,Animals ,Humans ,Prodrugs ,evofosfamide ,TH-302 ,Evofosfamide ,Radiotherapy ,business.industry ,Chemoradiotherapy ,Tumor Oxygenation ,Prodrug ,medicine.disease ,10044 Clinic for Radiation Oncology ,Cell Hypoxia ,3. Good health ,Radiation therapy ,030104 developmental biology ,Oncology ,chemistry ,hypoxia-activated prodrug ,Head and Neck Neoplasms ,Nitroimidazoles ,030220 oncology & carcinogenesis ,Concomitant ,Immunology ,Cancer research ,2730 Oncology ,Phosphoramide Mustards ,business ,ionizing radiation ,Adjuvant ,Research Paper - Abstract
// Katarzyna J. Nytko 1, 2 , Ivo Grgic 1, 2 , Sabine Bender 1 , Janosch Ott 1 , Matthias Guckenberger 3 , Oliver Riesterer 2, 3 , Martin Pruschy 1, 2 1 Laboratory for Applied Radiobiology, Department of Radiation Oncology, University Hospital Zurich, Zurich, Switzerland 2 Clinical Research Priority Program “Tumor Oxygenation”, Zurich, Switzerland 3 Department of Radiation Oncology, University Hospital Zurich, Zurich, Switzerland Correspondence to: Martin Pruschy, email: martin.pruschy@usz.ch Keywords: evofosfamide, TH-302, hypoxia-activated prodrug, ionizing radiation, P450 oxidoreductase Received: June 29, 2016 Accepted: February 06, 2017 Published: February 28, 2017 ABSTRACT The promising treatment combination of ionizing radiation (IR) with a hypoxia-activated prodrug (HAP) is based on biological cooperation. Here we investigated the hypoxia-activated prodrug evofosfamide in combination with different treatment regimens of IR against lung A549- and head&neck UT-SCC-14-derived tumor xenografts. DNA damage-related endpoints and clonogenic cell survival of A549 and UT-SCC-14 carcinoma cells were probed under normoxia and hypoxia. Evofosfamide (TH-302) induced DNA-damage and a dose-dependent antiproliferative response in A549 cells on cellular pretreatment under hypoxia, and supra-additively reduced clonogenic survival in combination with IR. Concomitant treatment of A549-derived tumor xenografts with evofosfamide and fractionated irradiation induced the strongest treatment response in comparison to the corresponding neoadjuvant and adjuvant regimens. Adjuvant evofosfamide was more potent than concomitant and neoadjuvant evofosfamide when combined with a single high dose of IR. Hypoxic UT-SCC-14 cells and tumor xenografts thereof were resistant to evofosfamide alone and in combination with IR, most probably due to reduced P450 oxidoreductase expression, which might act as major predictive determinant of sensitivity to HAPs. In conclusion, evofosfamide with IR is a potent combined treatment modality against hypoxic tumors. However, the efficacy and the therapeutic outcome of this combined treatment modality is, as indicated here in preclinical tumor models, dependent on scheduling parameters and tumor type, which is most probably related to the status of respective HAP-activating oxidoreductases. Further biomarker development is necessary for the launch of successful clinical trials.
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- 2017
49. Cell line-specific efficacy of thermoradiotherapy in human and canine cancer cells in vitro
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Thamm, Douglas H, Thamm, D H ( Douglas H ), Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Weyland, Mathias S; https://orcid.org/0000-0001-6389-0029, Scheidegger, Stephan, Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722, Thamm, Douglas H, Thamm, D H ( Douglas H ), Nytko, Katarzyna J; https://orcid.org/0000-0001-8148-6329, Thumser-Henner, Pauline; https://orcid.org/0000-0001-8817-2592, Weyland, Mathias S; https://orcid.org/0000-0001-6389-0029, Scheidegger, Stephan, and Rohrer Bley, Carla; https://orcid.org/0000-0002-5733-2722
- Abstract
OBJECTIVE: Aims were to investigate sensitivity of various human and canine cancer cell lines to hyperthermia and the influence of particular treatment conditions, and to analyze the DNA-damage response and mode of cell death in cell line radiosensitized by hyperthermia. Additionally, we were interested in the involvement of HSP70 in radiosensitization. METHODS: Radiosensitization by hyperthermia was determined in a panel of human and canine cancer cell lines using clonogenic cell survival assay, as well as levels of heat shock proteins (HSPs) using immunoblotting. The influence of the hyperthermia-radiotherapy time gap, different temperatures and the order of treatments on clonogenicity of hyperthermia-sensitive A549 cells was investigated. Additionally, DNA damage and cell death were assessed by Comet assay and an apoptosis/necrosis assay. Further we induced transient knockdown in A549 cells to test HSP70's involvement in radiosensitization. RESULTS: Out of eight cell lines tested, only two (A549 and Abrams) showed significant decrease in clonogenic cell survival when pre-treated with hyperthermia at 42°C. Strong induction of HSP70 upon thermoradiotherapy (HT-RT) treatment was found in all cell lines. Transient knockdown of HSP70 in A549 cells did not result in decrease of clonogenic cell survival in response to HT-RT. CONCLUSION: Tumor cell-type, temperature and order of treatment play an important role in radiosensitization by hyperthermia. However, hyperthermia has limited potency to radiosensitize canine cancer cells grown in a 2D cell culture setting presented here. DNA damage and apoptosis/necrosis did not increase upon combined treatment and cytosolic levels of HSP70 appear not to play critical role in the radiosensitization of A549 cells.
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- 2019
50. Cell line-specific efficacy of thermoradiotherapy in human and canine cancer cells in vitro
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Nytko, Katarzyna J., primary, Thumser-Henner, Pauline, additional, Weyland, Mathias S., additional, Scheidegger, Stephan, additional, and Bley, Carla Rohrer, additional
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- 2019
- Full Text
- View/download PDF
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