87 results on '"Noppen S"'
Search Results
2. 2-aminothiophene-3-carboxylic acid ester derivatives as novel highly selective cytostatic agents
- Author
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Balzarini, J., Thomas, J., Liekens, S., Noppen, S., Dehaen, W., and Romagnoli, R.
- Published
- 2014
- Full Text
- View/download PDF
3. Multivalent Tryptophan- and Tyrosine-Containing [60]Fullerene Hexa-Adducts as Dual HIV and Enterovirus A71 Entry Inhibitors
- Author
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Ruiz-Santaquiteria M., Illescas B.M., Abdelnabi R., Boonen A., Mills A., Martí-Marí O., Noppen S., Neyts J., Schols D., Gago F., San-Félix A., Camarasa M.-J., Martín, Nazario, Ruiz-Santaquiteria M., Illescas B.M., Abdelnabi R., Boonen A., Mills A., Martí-Marí O., Noppen S., Neyts J., Schols D., Gago F., San-Félix A., Camarasa M.-J., and Martín, Nazario
- Published
- 2021
4. Tryptophan trimers and tetramers inhibit dengue and Zika virus replication by interfering with viral attachment processes
- Author
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Research Foundation - Flanders, Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Innovación y Universidades (España), Consejo Superior de Investigaciones Científicas (España), Fikatas, A., Vervaeke, P., Martínez-Gualda, Belén, Martí-Marí, Olaia, Noppen, S., Meyen, E., Camarasa Rius, María José, San-Félix, Ana, Pannecouque, C., Schols, Dominique, Research Foundation - Flanders, Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Innovación y Universidades (España), Consejo Superior de Investigaciones Científicas (España), Fikatas, A., Vervaeke, P., Martínez-Gualda, Belén, Martí-Marí, Olaia, Noppen, S., Meyen, E., Camarasa Rius, María José, San-Félix, Ana, Pannecouque, C., and Schols, Dominique
- Abstract
Here, we report a class of tryptophan trimers and tetramers that inhibit (at low micromolar range) dengue and Zika virus infection in vitro. These compounds (AL family) have three or four peripheral tryptophan moieties directly linked to a central scaffold through their amino groups; thus, their carboxylic acid groups are free and exposed to the periphery. Structure-activity relationship (SAR) studies demonstrated that the presence of extra phenyl rings with substituents other than COOH at the N1 or C2 position of the indole side chain is a requisite for the antiviral activity against both viruses. The molecules showed potent antiviral activity, with low cytotoxicity, when evaluated on different cell lines. Moreover, they were active against laboratory and clinical strains of all four serotypes of dengue virus as well as a selected group of Zika virus strains. Additional mechanistic studies performed with the two most potent compounds (AL439 and AL440) demonstrated an interaction with the viral envelope glycoprotein (domain III) of dengue 2 virus, preventing virus attachment to the host cell membrane. Since no antiviral agent is approved at the moment against these two flaviviruses, further pharmacokinetic studies with these molecules are needed for their development as future therapeutic/prophylactic drugs.
- Published
- 2020
5. N-alpha-Aminoacyl Colchicines as Promising Anticancer Agents
- Author
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Marzo-Mas A, Conesa-Milián L, Noppen S, Liekens S, Falomir E, Murga J, Carda M, and Marco JA
- Subjects
Cancer, Cell Cycle, Colchicine, In Vivo, L- And D- Amino Acid, Non-Toxic, Oncogene Downregulation, Tubulin - Abstract
In the last years, many efforts have been made to find colchicine derivatives with reduced toxicity. Additionally, the deregulation of amino acids uptake by cancer cells provides an opportunity to improve anticancer drug effectiveness.
- Published
- 2019
6. Anti-HIV activity of new higher order G-quadruplex aptamers obtained from tetra-end-linked oligonucleotides
- Author
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Nici, F., primary, Oliviero, G., additional, Falanga, A. P., additional, D'Errico, S., additional, Marzano, M., additional, Musumeci, D., additional, Montesarchio, D., additional, Noppen, S., additional, Pannecouque, C., additional, Piccialli, G., additional, and Borbone, N., additional
- Published
- 2018
- Full Text
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7. Tubulin-TUB092 complex
- Author
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Canela, M.-D., primary, Noppen, S., additional, Bueno, O., additional, Prota, A.E., additional, Bargsten, K., additional, Saez-Calvo, G., additional, Jimeno, M.-L., additional, Benkheil, M., additional, Ribatti, D., additional, Velazquez, S., additional, Camarasa, M.-J., additional, Diaz, J.F., additional, Steinmetz, M.O., additional, Priego, E.-M., additional, Perez-Perez, M.-J., additional, and Liekens, S., additional
- Published
- 2016
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8. Hemozoin is a Prominent Inflammatory Virulence Factor in Malaria-Associated Acute Respiratory Distress Syndrome
- Author
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Deroost, K., Tyberghein, A., Lays, N., Noppen, S., Keiling, BRIGITTE EVELIN, Vanstreels, E., Komuta, M., Prato, Mauro, Lin, J., Pamplona, A., Janse, C., Arese, Paolo, Roskams, T., Daelemans, D., Opdenakker, G., and Van den Steen, P. E.
- Published
- 2013
9. 2-aminothiophene-3-carboxylic acid ester derivatives as novel highly selective cytostatic agents
- Author
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Balzarini, J., primary, Thomas, J., additional, Liekens, S., additional, Noppen, S., additional, Dehaen, W., additional, and Romagnoli, R., additional
- Published
- 2013
- Full Text
- View/download PDF
10. Inhibition of infection and transmission of HIV-1 and lack of significant impact on the vaginal commensal lactobacilli by carbohydrate-binding agents
- Author
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Petrova, M. I., primary, Mathys, L., additional, Lebeer, S., additional, Noppen, S., additional, Van Damme, E. J. M., additional, Tanaka, H., additional, Igarashi, Y., additional, Vaneechoutte, M., additional, Vanderleyden, J., additional, and Balzarini, J., additional
- Published
- 2013
- Full Text
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11. Citrullination of CXCL12 differentially reduces CXCR4 and CXCR7 binding with loss of inflammatory and anti-HIV-1 activity via CXCR4
- Author
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Struyf S, Noppen S, Loos T, Mortier A, Gouwy M, Verbeke H, Huskens D, Luangsay S, Marc Parmentier, Geboes K, Schols D, Van Damme J, and Proost P
12. Improved methods for haemozoin quantification in tissues yield organ-and parasite-specific information in malaria-infected mice
- Author
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Deroost Katrien, Lays Natacha, Noppen Sam, Martens Erik, Opdenakker Ghislain, and Van den Steen Philippe E
- Subjects
Chemo-luminescence ,Densitometry ,Haemozoin quantification ,Malaria pigment ,Plasmodium ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Despite intensive research, malaria remains a major health concern for non-immune residents and travelers in malaria-endemic regions. Efficient adjunctive therapies against life-threatening complications such as severe malarial anaemia, encephalopathy, placental malaria or respiratory problems are still lacking. Therefore, new insights into the pathogenesis of severe malaria are imperative. Haemozoin (Hz) or malaria pigment is produced during intra-erythrocytic parasite replication, released in the circulation after schizont rupture and accumulates inside multiple organs. Many in vitro and ex vivo immunomodulating effects are described for Hz but in vivo data are limited. This study aimed to improve methods for Hz quantification in tissues and to investigate the accumulation of Hz in different organs from mice infected with Plasmodium parasites with a varying degree of virulence. Methods An improved method for extraction of Hz from tissues was elaborated and coupled to an optimized, quantitative, microtiter plate-based luminescence assay with a high sensitivity. In addition, a technique for measuring Hz by semi-quantitative densitometry, applicable on transmitted light images, was developed. The methods were applied to measure Hz in various organs of C57BL/6 J mice infected with Plasmodium berghei ANKA, P. berghei NK65 or Plasmodium chabaudi AS. The used statistical methods were the Mann–Whitney U test and Pearsons correlation analysis. Results Most Hz was detected in livers and spleens, lower levels in lungs and kidneys, whereas sub-nanomolar amounts were observed in brains and hearts from infected mice, irrespectively of the parasite strain used. Furthermore, total Hz contents correlated with peripheral parasitaemia and were significantly higher in mice with a lethal P. berghei ANKA or P. berghei NK65-infection than in mice with a self-resolving P. chabaudi AS-infection, despite similar peripheral parasitaemia levels. Conclusions The developed techniques were useful to quantify Hz in different organs with a high reproducibility and sensitivity. An organ-specific Hz deposition pattern was found and was independent of the parasite strain used. Highest Hz levels were identified in mice infected with lethal parasite strains suggesting that Hz accumulation in tissues is associated with malaria-related mortality.
- Published
- 2012
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13. Anti-HIV activity of new higher order G-quadruplex aptamers obtained from tetra-end-linked oligonucleotides
- Author
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Daniela Montesarchio, Christophe Pannecouque, Domenica Musumeci, Sam Noppen, Fabrizia Nici, Stefano D'Errico, Andrea Patrizia Falanga, Gennaro Piccialli, Nicola Borbone, Maria Marzano, Giorgia Oliviero, Nici, F., Oliviero, G., Falanga, A. P., D'Errico, S., Marzano, M., Musumeci, D., Montesarchio, D., Noppen, S., Pannecouque, C., Piccialli, G., and Borbone, N.
- Subjects
0301 basic medicine ,Anti-HIV Agents ,Stereochemistry ,Aptamer ,HIV Infections ,Sequence (biology) ,Plasma protein binding ,HIV Envelope Protein gp120 ,G-quadruplex ,Biochemistry ,Cell Line ,03 medical and health sciences ,Humans ,Physical and Theoretical Chemistry ,chemistry.chemical_classification ,biology ,Chemistry ,Oligonucleotide ,Organic Chemistry ,Aptamers, Nucleotide ,biology.organism_classification ,G-Quadruplexes ,030104 developmental biology ,Oligodeoxyribonucleotides ,Cell culture ,Tetra ,Glycoprotein ,Protein Binding - Abstract
By combining the ability of short G-rich oligodeoxyribonucleotides (ODNs) containing the sequence 5’CGGA3’ to form higher order G-quadruplex (G4) complexes with the tetra-end-linked (TEL) concept to produce aptamers targeting the HIV envelope glycoprotein 120 (gp120), three new TEL-ODNs (1–3) having the sequence 5’CGGAGG3’ were synthesized with the aim of studying the effect of G4 dimerization on their anti-HIV activity. Furthermore, in order to investigate the effect of the groups at the 5’ position, the 5’ ends of 1–3 were left uncapped (1) or capped with either the lipophilic dimethoxytrityl (DMT) (2) or the hydrophilic glucosyl-4-phosphate (3) moieties. The here reported results demonstrate that only the DMT-substituted TEL-ODN 2 is effective in protecting human MT-4 cell cultures from HIV infection (76% max protection), notwithstanding all the three new aptamers proved to be capable of forming stable higher order dimeric G4s when annealed in K+-containing buffer, thus suggesting that the recognition of a hydrophobic pocket on the target glycoprotein by the aptamers represents a main structural feature for triggering their anti-HIV activity.
- Published
- 2018
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14. Hairpin oligonucleotides forming G-quadruplexes: New aptamers with anti-HIV activity
- Author
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Nicoletta Potenza, Armando Zarrelli, Giovanni Di Fabio, Valeria Romanucci, Maria Gaglione, Anna Messere, Jan Balzarini, Sam Noppen, Sandra Liekens, Romanucci, Valeria, Gaglione, Maria, Messere, Anna, Potenza, Nicoletta, Zarrelli, Armando, Noppen, Sam, Liekens, Sandra, Balzarini, Jan, DI FABIO, Giovanni, Romanucci, V, Gaglione, M, Zarrelli, A, Noppen, S, Liekens, S, Balzarini, J, and Di Fabio, G.
- Subjects
Anti-HIV activity ,Aptamer ,Stereochemistry ,Anti-HIV Agents ,Oligonucleotides ,Microbial Sensitivity Tests ,Conjugated system ,G-quadruplex ,Solid-phase synthesis ,Conjugated hairpin oligonucleotide ,Oligonucleotide ,Drug Discovery ,G-Quadruplexe ,Molecule ,Cytotoxicity ,Solid-phase synthesi ,Pharmacology ,Molecular Structure ,Chemistry ,Microbial Sensitivity Test ,Drug Discovery3003 Pharmaceutical Science ,Medicine (all) ,Organic Chemistry ,Anti-HIV Agent ,General Medicine ,Aptamers, Nucleotide ,Surface Plasmon Resonance ,G-Quadruplexes ,Phosphodiester bond ,HIV-2 ,HIV-1 - Abstract
We describe the facile syntheses of new modified oligonucleotides based on d(TG3AG) that form bimolecular G-quadruplexes and possess a HEG loop as an inversion of polarity site 3'-3' or 5'-5' and aromatic residues conjugated to the 5'-end through phosphodiester bonds. The conjugated hairpin G-quadruplexes exhibited parallel orientation, high thermal stability, elevated resistance in human serum and high or moderate anti-HIV-1 activity with low cytotoxicity. Further, these molecules showed significant binding to HIV envelope glycoproteins gp120, gp41 and HSA, as revealed by SPR assays. As a result, these conjugated hairpins represent the first active anti-HIV-1 bimolecular G-quadruplexes based on the d(TG3AG) sequence. publisher: Elsevier articletitle: Hairpin oligonucleotides forming G-quadruplexes: New aptamers with anti-HIV activity journaltitle: European Journal of Medicinal Chemistry articlelink: http://dx.doi.org/10.1016/j.ejmech.2014.10.030 content_type: article copyright: Copyright © 2014 Elsevier Masson SAS. All rights reserved. ispartof: European Journal of Medicinal Chemistry vol:89 pages:51-8 ispartof: location:France status: published
- Published
- 2015
15. Functional assessment of genetic variants in thrombomodulin detected in patients with bleeding and thrombosis.
- Author
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Van Laer C, Lavend'homme R, Baert S, De Wispelaere K, Thys C, Kint C, Noppen S, Peerlinck K, Van Geet C, Schols D, Vanassche T, Labarque V, Verhamme P, Jacquemin MG, and Freson K
- Abstract
Thrombomodulin (TM) expressed on endothelial cells regulates coagulation. Specific nonsense variants in the TM gene, THBD, result in high soluble TM levels causing rare bleeding disorder. In contrast, though THBD variants have been associated with venous thromboembolism, this association remains controversial. A multigene panel was used to diagnose 601 patients with inherited bleeding or thrombotic disorders. This resulted in the identification of 8 THBD variants for six patients with a thrombotic (C175S, A282P, L433P, P501L, G502R, P508L) and two patients with a bleeding (P260A, T478I) phenotype. These were all classified as variants of uncertain significance, and we here aimed to assess their functional role in coagulation. For this purpose, soluble and cell membrane-bound recombinant TM were produced in Expi293FTM cells. L433P TM showed a marked decrease in the inhibition of thrombin generation and complete inhibition of protein C and TAFI activation. Soluble C175S TM showed decreased inhibition of thrombin generation and protein C activation, while no effect was observed for membrane-bound TM. For the other TM variants, no effect on thrombin generation nor protein C or TAFI activation could be observed. Surface plasmon resonance analysis showed absent thrombin-TM binding in the presence of L433P, as this residue is located at their interaction site. In conclusion, our study shows functional effects of L433P TM and potentially also C175S TM that are compatible with an increased thrombosis risk. THBD variants are rare but can be relevant to both bleeding and thrombosis. Functional assays for these variants are critical to understand their role., (Copyright © 2025 American Society of Hematology.)
- Published
- 2025
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16. Natural carboxyterminal truncation of human CXCL10 attenuates glycosaminoglycan binding, CXCR3A signaling and lymphocyte chemotaxis, while retaining angiostatic activity.
- Author
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Dillemans L, Yu K, De Zutter A, Noppen S, Gouwy M, Berghmans N, Verhallen L, De Bondt M, Vanbrabant L, Brusselmans S, Martens E, Schols D, Verschueren P, Rosenkilde MM, Marques PE, Struyf S, and Proost P
- Subjects
- Animals, Cricetinae, Humans, Mice, Cricetulus, Endothelial Cells metabolism, Heparin metabolism, T-Lymphocytes metabolism, Chemokine CXCL10 metabolism, Chemotaxis, Glycosaminoglycans metabolism
- Abstract
Background: Interferon-γ-inducible protein of 10 kDa (IP-10/CXCL10) is a dual-function CXC chemokine that coordinates chemotaxis of activated T cells and natural killer (NK) cells via interaction with its G protein-coupled receptor (GPCR), CXC chemokine receptor 3 (CXCR3). As a consequence of natural posttranslational modifications, human CXCL10 exhibits a high degree of structural and functional heterogeneity. However, the biological effect of natural posttranslational processing of CXCL10 at the carboxy (C)-terminus has remained partially elusive. We studied CXCL10
(1-73) , lacking the four endmost C-terminal amino acids, which was previously identified in supernatant of cultured human fibroblasts and keratinocytes., Methods: Relative levels of CXCL10(1-73) and intact CXCL10(1-77) were determined in synovial fluids of patients with rheumatoid arthritis (RA) through tandem mass spectrometry. The production of CXCL10(1-73) was optimized through Fmoc-based solid phase peptide synthesis (SPPS) and a strategy to efficiently generate human CXCL10 proteoforms was introduced. CXCL10(1-73) was compared to intact CXCL10(1-77) using surface plasmon resonance for glycosaminoglycan (GAG) binding affinity, assays for cell migration, second messenger signaling downstream of CXCR3, and flow cytometry of CHO cells and primary human T lymphocytes and endothelial cells. Leukocyte recruitment in vivo upon intraperitoneal injection of CXCL10(1-73) was also evaluated., Results: Natural CXCL10(1-73) was more abundantly present compared to intact CXCL10(1-77) in synovial fluids of patients with RA. CXCL10(1-73) had diminished affinity for GAG including heparin, heparan sulfate and chondroitin sulfate A. Moreover, CXCL10(1-73) exhibited an attenuated capacity to induce CXCR3A-mediated signaling, as evidenced in calcium mobilization assays and through quantification of phosphorylated extracellular signal-regulated kinase-1/2 (ERK1/2) and protein kinase B/Akt. Furthermore, CXCL10(1-73) incited significantly less primary human T lymphocyte chemotaxis in vitro and peritoneal ingress of CXCR3+ T lymphocytes in mice. In contrast, loss of the four endmost C-terminal residues did not affect the inhibitory properties of CXCL10 on migration, proliferation, wound closure, phosphorylation of ERK1/2, and sprouting of human microvascular endothelial cells., Conclusion: Our study shows that the C-terminal residues Lys74 -Pro77 of CXCL10 are important for GAG binding, signaling through CXCR3A, T lymphocyte chemotaxis, but dispensable for angiostasis., (© 2024. The Author(s).)- Published
- 2024
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17. PRO-2000 exhibits SARS-CoV-2 antiviral activity by interfering with spike-heparin binding.
- Author
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Vanderlinden E, Boonen A, Noppen S, Schoofs G, Imbrechts M, Geukens N, Snoeck R, Stevaert A, Naesens L, Andrei G, and Schols D
- Subjects
- Chlorocebus aethiops, Animals, Humans, Angiotensin-Converting Enzyme 2, Caco-2 Cells, Vero Cells, SARS-CoV-2, Protein Binding, Spike Glycoprotein, Coronavirus, Antiviral Agents pharmacology, COVID-19
- Abstract
Here, we report on the anti-SARS-CoV-2 activity of PRO-2000, a sulfonated polyanionic compound. In Vero cells infected with the Wuhan, alpha, beta, delta or omicron variant, PRO-2000 displayed EC
50 values of 1.1 μM, 2.4 μM, 1.3 μM, 2.1 μM and 0.11 μM, respectively, and an average selectivity index (i.e. ratio of cytotoxic versus antiviral concentration) of 172. Its anti-SARS-CoV-2 activity was confirmed by virus yield assays in Vero cells, Caco2 cells and A549 cells overexpressing ACE2 and TMPRSS2 (A549-AT). Using pseudoviruses bearing the SARS-CoV-2 spike (S), PRO-2000 was shown to block the S-mediated pseudovirus entry in Vero cells and A549-AT cells, with EC50 values of 0.091 μM and 1.6 μM, respectively. This entry process is initiated by interaction of the S glycoprotein with angiotensin-converting enzyme 2 (ACE2) and heparan sulfate proteoglycans. Surface Plasmon Resonance (SPR) studies showed that PRO-2000 binds to the receptor-binding domain (RBD) of S with a KD of 1.6 nM. Similar KD values (range: 1.2 nM-2.1 nM) were obtained with the RBDs of the alpha, beta, delta and omicron variants. In an SPR neutralization assay, PRO-2000 had no effect on the interaction between the RBD and ACE2. Instead, PRO-2000 was proven to inhibit binding of the RBD to a heparin-coated sensor chip, yielding an IC50 of 1.1 nM. To conclude, PRO-2000 has the potential to inhibit a broad range of SARS-CoV-2 variants by blocking the heparin-binding site on the S protein., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2023
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18. Novel Human/Non-Human Primate Cross-Reactive Anti-Transferrin Receptor Nanobodies for Brain Delivery of Biologics.
- Author
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Rué L, Jaspers T, Degors IMS, Noppen S, Schols D, De Strooper B, and Dewilde M
- Abstract
The blood-brain barrier (BBB), while being the gatekeeper of the central nervous system (CNS), is a bottleneck for the treatment of neurological diseases. Unfortunately, most of the biologicals do not reach their brain targets in sufficient quantities. The antibody targeting of receptor-mediated transcytosis (RMT) receptors is an exploited mechanism that increases brain permeability. We previously discovered an anti-human transferrin receptor (TfR) nanobody that could efficiently deliver a therapeutic moiety across the BBB. Despite the high homology between human and cynomolgus TfR, the nanobody was unable to bind the non-human primate receptor. Here we report the discovery of two nanobodies that were able to bind human and cynomolgus TfR, making these nanobodies more clinically relevant. Whereas nanobody BBB00515 bound cynomolgus TfR with 18 times more affinity than it did human TfR, nanobody BBB00533 bound human and cynomolgus TfR with similar affinities. When fused with an anti-beta-site amyloid precursor protein cleaving enzyme (BACE1) antibody (1A11AM), each of the nanobodies was able to increase its brain permeability after peripheral injection. A 40% reduction of brain Aβ
1-40 levels could be observed in mice injected with anti-TfR/BACE1 bispecific antibodies when compared to vehicle-injected mice. In summary, we found two nanobodies that could bind both human and cynomolgus TfR with the potential to be used clinically to increase the brain permeability of therapeutic biologicals.- Published
- 2023
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19. Novel Polymyxin-Inspired Peptidomimetics Targeting the SARS-CoV-2 Spike:hACE2 Interface.
- Author
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Bugatti K, Sartori A, Battistini L, Coppa C, Vanhulle E, Noppen S, Provinciael B, Naesens L, Stevaert A, Contini A, Vermeire K, and Zanardi F
- Subjects
- Humans, SARS-CoV-2, Binding Sites, Angiotensin-Converting Enzyme 2 chemistry, Polymyxins, Pandemics, Protein Binding, COVID-19, Peptidomimetics pharmacology
- Abstract
Though the bulk of the COVID-19 pandemic is behind, the search for effective and safe anti-SARS-CoV-2 drugs continues to be relevant. A highly pursued approach for antiviral drug development involves targeting the viral spike (S) protein of SARS-CoV-2 to prevent its attachment to the cellular receptor ACE2. Here, we exploited the core structure of polymyxin B, a naturally occurring antibiotic, to design and synthesize unprecedented peptidomimetics (PMs), intended to target contemporarily two defined, non-overlapping regions of the S receptor-binding domain (RBD). Monomers 1 , 2 , and 8 , and heterodimers 7 and 10 bound to the S-RBD with micromolar affinity in cell-free surface plasmon resonance assays ( K
D ranging from 2.31 μM to 2.78 μM for dimers and 8.56 μM to 10.12 μM for monomers). Although the PMs were not able to fully protect cell cultures from infection with authentic live SARS-CoV-2, dimer 10 exerted a minimal but detectable inhibition of SARS-CoV-2 entry in U87.ACE2+ cells. These results validated a previous modeling study and provided the first proof-of-feasibility of using medium-sized heterodimeric PMs for targeting the S-RBD. Thus, heterodimers+ cells. These results validated a previous modeling study and provided the first proof-of-feasibility of using medium-sized heterodimeric PMs for targeting the S-RBD. Thus, heterodimers 7 may serve as a lead for the development of optimized compounds, which are structurally related to polymyxin, with improved S-RBD affinity and anti-SARS-CoV-2 potential.10 may serve as a lead for the development of optimized compounds, which are structurally related to polymyxin, with improved S-RBD affinity and anti-SARS-CoV-2 potential.- Published
- 2023
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20. Cellular electrical impedance to profile SARS-CoV-2 fusion inhibitors and to assess the fusogenic potential of spike mutants.
- Author
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Vanhulle E, Doijen J, Stroobants J, Provinciael B, Noppen S, Schols D, Stevaert A, and Vermeire K
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- Humans, Electric Impedance, HEK293 Cells, Spike Glycoprotein, Coronavirus chemistry, Membrane Fusion, Antiviral Agents pharmacology, Antiviral Agents chemistry, Anti-Retroviral Agents pharmacology, SARS-CoV-2 genetics, SARS-CoV-2 metabolism, COVID-19
- Abstract
Despite the vaccination campaigns for COVID-19, we still cannot control the spread of SARS-CoV-2, as evidenced by the ongoing circulation of the Omicron variants of concern. This highlights the need for broad-spectrum antivirals to further combat COVID-19 and to be prepared for a new pandemic with a (re-)emerging coronavirus. An interesting target for antiviral drug development is the fusion of the viral envelope with host cell membranes, a crucial early step in the replication cycle of coronaviruses. In this study, we explored the use of cellular electrical impedance (CEI) to quantitatively monitor morphological changes in real time, resulting from cell-cell fusion elicited by SARS-CoV-2 spike. The impedance signal in CEI-quantified cell-cell fusion correlated with the expression level of SARS-CoV-2 spike in transfected HEK293T cells. For antiviral assessment, we validated the CEI assay with the fusion inhibitor EK1 and measured a concentration-dependent inhibition of SARS-CoV-2 spike mediated cell-cell fusion (IC
50 value of 0.13 μM). In addition, CEI was used to confirm the fusion inhibitory activity of the carbohydrate-binding plant lectin UDA against SARS-CoV-2 (IC50 value of 0.55 μM), which complements prior in-house profiling activities. Finally, we explored the utility of CEI in quantifying the fusogenic potential of mutant spike proteins and in comparing the fusion efficiency of SARS-CoV-2 variants of concern. In summary, we demonstrate that CEI is a powerful and sensitive technology that can be applied to studying the fusion process of SARS-CoV-2 and to screening and characterizing fusion inhibitors in a label-free and non-invasive manner., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2023
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21. FLUIDOT: A Modular Microfluidic Platform for Single-Cell Study and Retrieval, with Applications in Drug Tolerance Screening and Antibody Mining.
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Breukers J, Ven K, Struyfs C, Ampofo L, Rutten I, Imbrechts M, Pollet F, Van Lent J, Kerstens W, Noppen S, Schols D, De Munter P, Thibaut HJ, Vanhoorelbeke K, Spasic D, Declerck P, Cammue BPA, Geukens N, Thevissen K, and Lammertyn J
- Subjects
- Humans, SARS-CoV-2, Antibodies, Saccharomyces cerevisiae genetics, Microfluidics methods, COVID-19
- Abstract
Advancements in lab-on-a-chip technologies have revolutionized the single-cell analysis field. However, an accessible platform for in-depth screening and specific retrieval of single cells, which moreover enables studying diverse cell types and performing various downstream analyses, is still lacking. As a solution, FLUIDOT is introduced, a versatile microfluidic platform incorporating customizable microwells, optical tweezers and an interchangeable cell-retrieval system. Thanks to its smart microfluidic design, FLUIDOT is straightforward to fabricate and operate, rendering the technology widely accessible. The performance of FLUIDOT is validated and its versatility is subsequently demonstrated in two applications. First, drug tolerance in yeast cells is studied, resulting in the discovery of two treatment-tolerant populations. Second, B cells from convalescent COVID-19 patients are screened, leading to the discovery of highly affine, in vitro neutralizing monoclonal antibodies against SARS-CoV-2. Owing to its performance, flexibility, and accessibility, it is foreseen that FLUIDOT will enable phenotypic and genotypic analysis of diverse cell samples and thus elucidate unexplored biological questions., (© 2023 Wiley-VCH GmbH.)
- Published
- 2023
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22. A stabilized CXCL9(74-103)-derived peptide selectively inhibits proliferation, adhesion and metastasis of tumor cells that express high levels of heparan sulfate.
- Author
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De Zutter A, Dillemans L, Berghmans N, Noppen S, Crijns H, Verscheure P, Verhaegen J, Martens E, Vanbrabant L, Pörtner N, Schols D, Proost P, and Struyf S
- Subjects
- Peptides, Cell Proliferation, Cell Adhesion, Heparitin Sulfate pharmacology, Glycosaminoglycans
- Abstract
Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: A patent application based on the results described in this study has been submitted whereupon Alexandra De Zutter, Sofie Struyf and Paul Proost are listed as inventors.
- Published
- 2022
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23. Carbohydrate-binding protein from stinging nettle as fusion inhibitor for SARS-CoV-2 variants of concern.
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Vanhulle E, D'huys T, Provinciael B, Stroobants J, Camps A, Noppen S, Schols D, Van Damme EJM, Maes P, Stevaert A, and Vermeire K
- Subjects
- Angiotensin-Converting Enzyme 2, Anti-Retroviral Agents, Antiviral Agents pharmacology, Carbohydrates, Europium, Humans, Receptors, Cell Surface, SARS-CoV-2 genetics, Spike Glycoprotein, Coronavirus genetics, Spike Glycoprotein, Coronavirus metabolism, Viral Proteins, COVID-19, Urtica dioica metabolism
- Abstract
Urtica dioica agglutinin (UDA) is a carbohydrate-binding small monomeric protein isolated from stinging nettle rhizomes. It inhibits replication of a broad range of viruses, including coronaviruses, in multiple cell types, with appealing selectivity. In this work, we investigated the potential of UDA as a broad-spectrum antiviral agent against SARS-CoV-2. UDA potently blocks transduction of pseudotyped SARS-CoV-2 in A549.ACE2
+ -TMPRSS2 cells, with IC50 values ranging from 0.32 to 1.22 µM. Furthermore, UDA prevents viral replication of the early Wuhan-Hu-1 strain in Vero E6 cells (IC50 = 225 nM), but also the replication of SARS-CoV-2 variants of concern, including Alpha, Beta and Gamma (IC50 ranging from 115 to 171 nM). In addition, UDA exerts antiviral activity against the latest circulating Delta and Omicron variant in U87.ACE2+ cells (IC50 values are 1.6 and 0.9 µM, respectively). Importantly, when tested in Air-Liquid Interface (ALI) primary lung epithelial cell cultures, UDA preserves antiviral activity against SARS-CoV-2 (20A.EU2 variant) in the nanomolar range. Surface plasmon resonance (SPR) studies demonstrated a concentration-dependent binding of UDA to the viral spike protein of SARS-CoV-2, suggesting interference of UDA with cell attachment or subsequent virus entry. Moreover, in additional mechanistic studies with cell-cell fusion assays, UDA inhibited SARS-CoV-2 spike protein-mediated membrane fusion. Finally, pseudotyped SARS-CoV-2 mutants with N-glycosylation deletions in the S2 subunit of the spike protein remained sensitive to the antiviral activity of UDA. In conclusion, our data establish UDA as a potent fusion inhibitor for the current variants of SARS-CoV-2., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Vanhulle, D’huys, Provinciael, Stroobants, Camps, Noppen, Schols, Van Damme, Maes, Stevaert and Vermeire.)- Published
- 2022
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24. Potent neutralizing anti-SARS-CoV-2 human antibodies cure infection with SARS-CoV-2 variants in hamster model.
- Author
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Imbrechts M, Maes W, Ampofo L, Van den Berghe N, Calcoen B, Van Looveren D, Kerstens W, Rasulova M, Vercruysse T, Noppen S, Abdelnabi R, Foo C, Hollevoet K, Maes P, Zhang X, Jochmans D, Ven K, Lammertyn J, Vanhoorelbeke K, Callewaert N, De Munter P, Schols D, Thibaut HJ, Neyts J, Declerck P, and Geukens N
- Abstract
Treatment with neutralizing monoclonal antibodies (mAbs) against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) contributes to COVID-19 management. Unfortunately, SARS-CoV-2 variants escape several of these recently approved mAbs, highlighting the need for additional discovery and development. In a convalescent patient with COVID-19, we identified six mAbs, classified in four epitope groups, that potently neutralized SARS-CoV-2 D614G, beta, gamma, and delta infection in vitro , with three mAbs neutralizing omicron as well. In hamsters, mAbs 3E6 and 3B8 potently cured infection with SARS-CoV-2 Wuhan, beta, and delta when administered post-viral infection at 5 mg/kg. Even at 0.2 mg/kg, 3B8 still reduced viral titers. Intramuscular delivery of DNA-encoded 3B8 resulted in in vivo mAb production of median serum levels up to 90 μg/mL, and protected hamsters against delta infection. Overall, our data mark 3B8 as a promising candidate against COVID-19, and highlight advances in both the identification and gene-based delivery of potent human mAbs., Competing Interests: The authors filed two patent applications: EP21206787.0 and EP21216594.8., (© 2022 The Authors.)
- Published
- 2022
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25. Organotropic dendrons with high potency as HIV-1, HIV-2 and EV-A71 cell entry inhibitors.
- Author
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Martí-Marí O, Martínez-Gualda B, Fernández-Barahona I, Mills A, Abdelnabi R, Noppen S, Neyts J, Schols D, Camarasa MJ, Herranz F, Gago F, and San-Félix A
- Subjects
- HIV-2, Humans, Virus Internalization, Dendrimers chemistry, Enterovirus A, Human, Enterovirus Infections, HIV Fusion Inhibitors pharmacology, HIV-1
- Abstract
We have recently described a novel family of compounds of reduced size and dual anti-HIV and anti-EV71 activity that encompasses tripodal and tetrapodal derivatives. The tripodal prototype, AL-470, has a nitro group at the focal point of the central scaffold and three attached tryptophan residues, each of which bearing an isophthaloyl moiety at the C2 position of the indole ring. A nitro to amino substitution has allowed us now to introduce a chemically addressable functionality to perform further structural modifications consisting of both direct and linker-mediated attachment of several aromatic groups, including the fluorescent dye Alexa Fluor 647 and the antibody-recruiting 2,4-dinitrophenyl motif. Some of the derivatives turned out to be more potent and selective than AL-470 against HIV-1, HIV-2 and EV-A71. The fluorescent probe demonstrated a specific tropism for intestines and lungs, two important niches for the human microbiome in health and disease., (Copyright © 2022 The Authors. Published by Elsevier Masson SAS.. All rights reserved.)
- Published
- 2022
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26. SARS-CoV-2 Permissive glioblastoma cell line for high throughput antiviral screening.
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Vanhulle E, Stroobants J, Provinciael B, Camps A, Noppen S, Maes P, and Vermeire K
- Subjects
- Angiotensin-Converting Enzyme 2, Antiviral Agents pharmacology, COVID-19 Vaccines, Cell Line, High-Throughput Screening Assays, Humans, Peptidyl-Dipeptidase A metabolism, SARS-CoV-2, Spike Glycoprotein, Coronavirus metabolism, Glioblastoma drug therapy, COVID-19 Drug Treatment
- Abstract
Despite the great success of the administered vaccines against SARS-CoV-2, the virus can still spread, as evidenced by the current circulation of the highly contagious Omicron variant. This emphasizes the additional need to develop effective antiviral countermeasures. In the context of early preclinical studies for antiviral assessment, robust cellular infection systems are required to screen drug libraries. In this study, we reported the implementation of a human glioblastoma cell line, stably expressing ACE2, in a SARS-CoV-2 cytopathic effect (CPE) reduction assay. These glioblastoma cells, designated as U87.ACE2
+ , expressed ACE2 and cathepsin B abundantly, but had low cellular levels of TMPRSS2 and cathepsin L. The U87.ACE2+ cells fused highly efficiently and quickly with SARS-CoV-2 spike expressing cells. Furthermore, upon infection with SARS-CoV-2 wild-type virus, the U87.ACE2+ cells displayed rapidly a clear CPE that resulted in complete cell lysis and destruction of the cell monolayer. By means of several readouts we showed that the U87.ACE2+ cells actively replicate SARS-CoV-2. Interestingly, the U87.ACE2+ cells could be successfully implemented in an MTS-based colorimetric CPE reduction assay, providing IC50 values for Remdesivir and Nirmatrelvir in the (low) nanomolar range. Lastly, the U87.ACE2+ cells were consistently permissive to all tested SARS-CoV-2 variants of concern, including the current Omicron variant. Thus, ACE2 expressing glioblastoma cells are highly permissive to SARS-CoV-2 with productive viral replication and with the induction of a strong CPE that can be utilized in high-throughput screening platforms., (Copyright © 2022 The Author(s). Published by Elsevier B.V. All rights reserved.)- Published
- 2022
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27. Functional Analysis of Human and Feline Coronavirus Cross-Reactive Antibodies Directed Against the SARS-CoV-2 Fusion Peptide.
- Author
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Vanderheijden N, Stevaert A, Xie J, Ren X, Barbezange C, Noppen S, Desombere I, Verhasselt B, Geldhof P, Vereecke N, Stroobants V, Oh D, Vanhee M, Naesens LMJ, and Nauwynck HJ
- Subjects
- Adult, Animals, Antibodies, Neutralizing blood, Antibodies, Viral blood, Blood Donors, COVID-19 blood, COVID-19 virology, COVID-19 Serological Testing methods, Cats, Chlorocebus aethiops, Cross Reactions, Epitopes immunology, Humans, Swine, Vero Cells, Antibodies, Neutralizing immunology, Antibodies, Viral immunology, Antigens, Viral immunology, COVID-19 immunology, Coronavirus, Feline immunology, Pandemics, Peptides immunology, SARS-CoV-2 immunology, Spike Glycoprotein, Coronavirus immunology
- Abstract
To face the continuous emergence of SARS-CoV-2 variants, broadly protective therapeutic antibodies are highly needed. We here focused on the fusion peptide (FP) region of the viral spike antigen since it is highly conserved among alpha- and betacoronaviruses. First, we found that coronavirus cross-reactive antibodies are commonly formed during infection, being omnipresent in sera from COVID-19 patients, in ~50% of pre-pandemic human sera (rich in antibodies against endemic human coronaviruses), and even in feline coronavirus-infected cats. Pepscan analyses demonstrated that a confined N-terminal region of the FP is strongly immunogenic across diverse coronaviruses. Peptide-purified human antibodies targeting this conserved FP epitope exhibited broad binding of alpha- and betacoronaviruses, besides weak and transient SARS-CoV-2 neutralizing activity. Being frequently elicited by coronavirus infection, these FP-binding antibodies might potentially exhibit Fc-mediated effector functions and influence the kinetics or severity of coronavirus infection and disease., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Vanderheijden, Stevaert, Xie, Ren, Barbezange, Noppen, Desombere, Verhasselt, Geldhof, Vereecke, Stroobants, Oh, Vanhee, Naesens and Nauwynck.)
- Published
- 2022
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28. Skeleton binding protein-1-mediated parasite sequestration inhibits spontaneous resolution of malaria-associated acute respiratory distress syndrome.
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Possemiers H, Pham TT, Coens M, Pollenus E, Knoops S, Noppen S, Vandermosten L, D'haese S, Dillemans L, Prenen F, Schols D, Franke-Fayard B, and Van den Steen PE
- Subjects
- Animals, Disease Progression, Female, Lung metabolism, Lung pathology, Malaria parasitology, Male, Mice, Mice, Inbred C57BL, Protozoan Proteins genetics, Respiratory Distress Syndrome metabolism, Respiratory Distress Syndrome parasitology, Respiratory Distress Syndrome pathology, Lung parasitology, Malaria complications, Membrane Proteins deficiency, Plasmodium berghei pathogenicity, Protozoan Proteins metabolism, Respiratory Distress Syndrome prevention & control
- Abstract
Malaria is a hazardous disease caused by Plasmodium parasites and often results in lethal complications, including malaria-associated acute respiratory distress syndrome (MA-ARDS). Parasite sequestration in the microvasculature is often observed, but its role in malaria pathogenesis and complications is still incompletely understood. We used skeleton binding protein-1 (SBP-1) KO parasites to study the role of sequestration in experimental MA-ARDS. The sequestration-deficiency of these SBP-1 KO parasites was confirmed with bioluminescence imaging and by measuring parasite accumulation in the lungs with RT-qPCR. The SBP-1 KO parasites induced similar lung pathology in the early stage of experimental MA-ARDS compared to wildtype (WT) parasites. Strikingly, the lung pathology resolved subsequently in more than 60% of the SBP-1 KO infected mice, resulting in prolonged survival despite the continuous presence of the parasite. This spontaneous disease resolution was associated with decreased inflammatory cytokine expression measured by RT-qPCR and lower expression of cytotoxic markers in pathogenic CD8+ T cells in the lungs of SBP-1 KO infected mice. These data suggest that SBP-1-mediated parasite sequestration and subsequent high parasite load are not essential for the development of experimental MA-ARDS but inhibit the resolution of the disease., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2021
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29. Deciphering the Role of Extracellular Vesicles Derived from ZIKV-Infected hcMEC/D3 Cells on the Blood-Brain Barrier System.
- Author
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Fikatas A, Dehairs J, Noppen S, Doijen J, Vanderhoydonc F, Meyen E, Swinnen JV, Pannecouque C, and Schols D
- Subjects
- Blood-Brain Barrier virology, Cells, Cultured, Central Nervous System virology, Endothelial Cells virology, Extracellular Vesicles virology, Humans, Lipidomics, RNA, Viral metabolism, Viral Nonstructural Proteins metabolism, Viral Proteins genetics, Viral Proteins metabolism, Zika Virus Infection virology, Blood-Brain Barrier metabolism, Extracellular Vesicles metabolism, Zika Virus physiology, Zika Virus Infection transmission
- Abstract
To date, no vaccines or antivirals are available against Zika virus (ZIKV). In addition, the mechanisms underlying ZIKV-associated pathogenesis of the central nervous system (CNS) are largely unexplored. Getting more insight into the cellular pathways that ZIKV recruits to facilitate infection of susceptible cells will be crucial for establishing an effective treatment strategy. In general, cells secrete a number of vesicles, known as extracellular vesicles (EVs), in response to viral infections. These EVs serve as intercellular communicators. Here, we investigated the role of EVs derived from ZIKV-infected human brain microvascular endothelial cells on the blood-brain barrier (BBB) system. We demonstrated that ZIKV-infected EVs (IEVs) can incorporate viral components, including ZIKV RNA, NS1, and E-protein, and further transfer them to several types of CNS cells. Using label-free impedance-based biosensing, we observed that ZIKV and IEVs can temporally disturb the monolayer integrity of BBB-mimicking cells, possibly by inducing structural rearrangements of the adherent protein VE-cadherin (immunofluorescence staining). Finally, differences in the lipidomic profile between EVs and their parental cells possibly suggest a preferential sorting mechanism of specific lipid species into the vesicles. To conclude, these data suggest that IEVs could be postulated as vehicles (Trojan horse) for ZIKV transmission via the BBB.
- Published
- 2021
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30. Labyrinthopeptin A1 inhibits dengue and Zika virus infection by interfering with the viral phospholipid membrane.
- Author
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Oeyen M, Meyen E, Noppen S, Claes S, Doijen J, Vermeire K, Süssmuth RD, and Schols D
- Subjects
- Animals, Antiviral Agents metabolism, Bacteriocins metabolism, Cell Survival drug effects, Cells, Cultured, Cytokines metabolism, Dose-Response Relationship, Drug, Humans, Peptides pharmacology, Viral Envelope metabolism, Virus Internalization drug effects, Viruses classification, Viruses drug effects, Antiviral Agents pharmacology, Bacteriocins pharmacology, Dengue Virus drug effects, Phospholipids metabolism, Viral Envelope drug effects, Zika Virus drug effects
- Abstract
To date, there are no broad-spectrum antivirals available to treat infections with flaviviruses such as dengue (DENV) and Zika virus (ZIKV). In this study, we determine the broad antiviral activity of the lantibiotic Labyrinthopeptin A1. We show that Laby A1 inhibits all DENV serotypes and various ZIKV strains with IC
50 around 1 μM. The structurally related Laby A2 also displayed a consistent, but about tenfold lower, antiviral activity. Furthermore, Laby A1 inhibits many viruses from divergent families such as HIV, YFV, RSV and Punta Torovirus. Of interest, Laby A1 does not show activity against non-enveloped viruses. Its antiviral activity is independent of the cell line or the used evaluation method, and can also be observed in MDDC, a physiologically relevant primary cell type. Furthermore, Laby A1 demonstrates low cellular toxicity and has a more favorable SI compared to duramycin, a well-described lantibiotic with broad-spectrum antiviral activity. Time-of-drug addition experiments demonstrate that Laby A1 inhibits infection and entry processes of ZIKV and DENV. We reveal that Laby A1 performs its broad antiviral activity by interacting with a viral factor rather than a cellular factor, and that it has virucidal properties. Finally, using SPR interaction studies we demonstrate that Laby A1 interacts with several phospholipids (i.e. PE and PS) present in the viral envelope. Together with other recent Labyrinthopeptin antiviral publications, this work validates the activity of Laby A1 as broad antiviral entry inhibitor with a unique mechanism of action and demonstrates its potential value as antiviral agent against emerging flaviviruses., (Copyright © 2021 Elsevier Inc. All rights reserved.)- Published
- 2021
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31. Double Arylation of the Indole Side Chain of Tri- and Tetrapodal Tryptophan Derivatives Renders Highly Potent HIV-1 and EV-A71 Entry Inhibitors†.
- Author
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Martí-Marí O, Martínez-Gualda B, de la Puente-Secades S, Mills A, Quesada E, Abdelnabi R, Sun L, Boonen A, Noppen S, Neyts J, Schols D, Camarasa MJ, Gago F, and San-Félix A
- Subjects
- Anti-HIV Agents chemical synthesis, Anti-HIV Agents chemistry, Dose-Response Relationship, Drug, HIV Fusion Inhibitors chemical synthesis, HIV Fusion Inhibitors chemistry, Indoles chemistry, Microbial Sensitivity Tests, Molecular Structure, Structure-Activity Relationship, Tryptophan chemical synthesis, Tryptophan chemistry, Anti-HIV Agents pharmacology, Enterovirus A, Human drug effects, HIV Fusion Inhibitors pharmacology, HIV-1 drug effects, Indoles pharmacology, Tryptophan pharmacology
- Abstract
We have recently described a new generation of potent human immunodeficiency virus (HIV) and EV-A71 entry inhibitors. The prototypes contain three or four tryptophan (Trp) residues bearing an isophthalic acid moiety at the C2 position of each side-chain indole ring. This work is now extended by both shifting the position of the isophthalic acid to C7 and synthesizing doubly arylated C2/C7 derivatives. The most potent derivative (50% effective concentration (EC
50 ) HIV-1, 6 nM; EC50 EV-A71, 40 nM), 33 ( AL-518 ), is a C2/C7 doubly arylated tetrapodal compound. Its superior anti-HIV potency with respect to the previous C2-arylated prototype is in consonance with its higher affinity for the viral gp120. 33 ( AL-518 ) showed comparable antiviral activities against X4 and R5 HIV-1 strains and seems to interact with the tip and base of the gp120 V3 loop. Taken together, these findings support the interest in 33 ( AL-518 ) as a useful new prototype for anti-HIV/EV71 drug development.- Published
- 2021
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32. Multivalent Tryptophan- and Tyrosine-Containing [60]Fullerene Hexa-Adducts as Dual HIV and Enterovirus A71 Entry Inhibitors.
- Author
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Ruiz-Santaquiteria M, Illescas BM, Abdelnabi R, Boonen A, Mills A, Martí-Marí O, Noppen S, Neyts J, Schols D, Gago F, San-Félix A, Camarasa MJ, and Martín N
- Subjects
- Hexosaminidase A, Humans, Tryptophan, Tyrosine, Enterovirus, Fullerenes, HIV Infections drug therapy
- Abstract
Unprecedented 3D hexa-adducts of [60]fullerene peripherally decorated with twelve tryptophan (Trp) or tyrosine (Tyr) residues have been synthesized. Studies on the antiviral activity of these novel compounds against HIV and EV71 reveal that they are much more potent against HIV and equally active against EV71 than the previously described dendrimer prototypes AL-385 and AL-463, which possess the same number of Trp/Tyr residues on the periphery but attached to a smaller and more flexible pentaerythritol core. These results demonstrate the relevance of the globular 3D presentation of the peripheral groups (Trp/Tyr) as well as the length of the spacer connecting them to the central core to interact with the viral envelopes, particularly in the case of HIV, and support the hypothesis that [60]fullerene can be an alternative and attractive biocompatible carbon-based scaffold for this type of highly symmetrical dendrimers. In addition, the functionalized fullerenes here described, which display twelve peripheral negatively charged indole moieties on their globular surface, define a new and versatile class of compounds with a promising potential in biomedical applications., (© 2021 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH.)
- Published
- 2021
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33. Internal Disulfide Bonding and Glycosylation of Interleukin-7 Protect Against Proteolytic Inactivation by Neutrophil Metalloproteinases and Serine Proteases.
- Author
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Vandooren J, Pereira RVS, Ugarte-Berzal E, Rybakin V, Noppen S, Stas MR, Bernaerts E, Ganseman E, Metzemaekers M, Schols D, Proost P, and Opdenakker G
- Subjects
- Cell Line, Cell Line, Tumor, Cytokines metabolism, Glycosylation, Humans, Inflammation metabolism, Leukocytes, Mononuclear metabolism, Neutrophil Activation physiology, Proteolysis, Interleukin-7 metabolism, Matrix Metalloproteinase 9 metabolism, Neutrophils metabolism, Serine Proteases metabolism
- Abstract
Interleukin 7 (IL-7) is a cell growth factor with a central role in normal T cell development, survival and differentiation. The lack of IL-7-IL-7 receptor(R)-mediated signaling compromises lymphoid development, whereas increased signaling activity contributes to the development of chronic inflammation, cancer and autoimmunity. Gain-of-function alterations of the IL-7R and the signaling through Janus kinases (JAKs) and signal transducers and activators of transcription (STATs) are enriched in T cell acute lymphoblastic leukemia (T-ALL) and autocrine production of IL-7 by T-ALL cells is involved in the phenotypes of leukemic initiation and oncogenic spreading. Several IL-7-associated pathologies are also characterized by increased presence of matrix metalloproteinase-9 (MMP-9), due to neutrophil degranulation and its regulated production by other cell types. Since proteases secreted by neutrophils are known to modulate the activity of many cytokines, we investigated the interactions between IL-7, MMP-9 and several other neutrophil-derived proteases. We demonstrated that MMP-9 efficiently cleaved human IL-7 in the exposed loop between the α-helices C and D and that this process is delayed by IL-7 N-linked glycosylation. Functionally, the proteolytic cleavage of IL-7 did not influence IL-7Rα binding and internalization nor the direct pro-proliferative effects of IL-7 on a T-ALL cell line (HPB-ALL) or in primary CD8
+ human peripheral blood mononuclear cells. A comparable effect was observed for the neutrophil serine proteases neutrophil elastase, proteinase 3 and combinations of neutrophil proteases. Hence, glycosylation and disulfide bonding as two posttranslational modifications influence IL-7 bioavailability in the human species: glycosylation protects against proteolysis, whereas internal cysteine bridging under physiological redox state keeps the IL-7 conformations as active proteoforms. Finally, we showed that mouse IL-7 does not contain the protease-sensitive loop and, consequently, was not cleaved by MMP-9. With the latter finding we discovered differences in IL-7 biology between the human and mouse species., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Vandooren, Pereira, Ugarte-Berzal, Rybakin, Noppen, Stas, Bernaerts, Ganseman, Metzemaekers, Schols, Proost and Opdenakker.)- Published
- 2021
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34. FO-SPR biosensor calibrated with recombinant extracellular vesicles enables specific and sensitive detection directly in complex matrices.
- Author
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Yildizhan Y, Vajrala VS, Geeurickx E, Declerck C, Duskunovic N, De Sutter D, Noppen S, Delport F, Schols D, Swinnen JV, Eyckerman S, Hendrix A, Lammertyn J, and Spasic D
- Subjects
- Antibodies chemistry, Fiber Optic Technology methods, HEK293 Cells, Humans, MCF-7 Cells, Neoplasms chemistry, Neoplasms diagnosis, Plasma chemistry, Reference Standards, Surface Plasmon Resonance methods, Biological Assay methods, Biological Assay standards, Biosensing Techniques methods, Calibration, Extracellular Vesicles chemistry
- Abstract
Extracellular vesicles (EVs) have drawn huge attention for diagnosing myriad of diseases, including cancer. However, the EV detection and analyses procedures often lack much desired sample standardization. To address this, we used well-characterized recombinant EVs (rEVs) for the first time as a biological reference material in developing a fiber optic surface plasmon resonance (FO-SPR) bioassay. In this context, EV binding on the FO-SPR probes was achieved only with EV-specific antibodies (e.g. anti-CD9 and anti-CD63) but not with non-specific anti-IgG. To increase detection sensitivity, we tested six different combinations of EV-specific antibodies in a sandwich bioassay. Calibration curves were generated with two most effective combinations (anti-CD9/
B anti-CD81 and anti-CD63/B anti-CD9), resulting in 103 and 104 times higher sensitivity than the EV concentration in human blood plasma from healthy or cancer patients, respectively. Additionally, by using anti-CD63/B anti-CD9, we detected rEVs spiked in cell culture medium and HEK293 endogenous EVs in the same matrix without any prior EV purification or enrichment. Lastly, we selectively captured breast cancer cell EVs spiked in blood plasma using anti-EpCAM antibody on the FO-SPR surface. The obtained results combined with FO-SPR real-time monitoring, fast response time and ease of operation, demonstrate its outstanding potential for EV quantification and analysis., Competing Interests: Professor Jeroen Lammertyn is a board member of FOx Biosystems, a spin‐off company of KU Leuven commercializing FO‐SPR platforms, next to the principal investigator of the Biosensors group., (© 2021 The Authors. Journal of Extracellular Vesicles published by Wiley Periodicals, LLC on behalf of the International Society for Extracellular Vesicles.)- Published
- 2021
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35. N-alpha-Aminoacyl Colchicines as Promising Anticancer Agents.
- Author
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Marzo-Mas A, Conesa-Milián L, Noppen S, Liekens S, Falomir E, Murga J, Carda M, and Marco JA
- Subjects
- Apoptosis drug effects, Cell Line, Tumor, Cell Proliferation drug effects, Dose-Response Relationship, Drug, G2 Phase Cell Cycle Checkpoints drug effects, Humans, M Phase Cell Cycle Checkpoints drug effects, Structure-Activity Relationship, Antineoplastic Agents chemistry, Antineoplastic Agents pharmacology, Colchicine chemistry, Colchicine pharmacology
- Abstract
Background: In the last years, many efforts have been made to find colchicine derivatives with reduced toxicity. Additionally, the deregulation of amino acid uptake by cancer cells provides an opportunity to improve anticancer drug effectiveness., Objective: To design new colchicine derivatives with reduced cytotoxicity and enhanced selectivity by means of introducing aminoacyl groups., Methods: 34 colchicine analogues bearing L- and D-amino acid pendants were synthetized and characterized by NMR, IR and MS techniques. Cytotoxicity and antimitotic properties were assessed by spectrophotometry and cell cycle assays. Oncogene downregulation was studied by RTqPCR whereas in vivo studies were performed in SCID mice., Results: Compounds exhibit high antiproliferative activities at the nanomolar level while being, in general, less cytotoxic than colchicine. Most compounds inhibit the polymerization of tubulin in a way similar to colchicine itself, with L-amino acid derivatives being the most active in the inhibition of tubulin polymerization. All selected compounds caused cell cycle arrest at the G2/M phase when tested at 1 μM. More specifically, Boc-L-proline derivative 6 arrested half of the population and showed one of the highest Selectivity Indexes. Derivatives 1 (Boc-glycine), 27 (D-leucine) and 31 (Boc-glycine-glycine) proved fairly active in downregulating the expression of the c-Myc, hTERT and VEGF oncogenes, with compound 6 (Boc-L-proline) having the highest activity. This compound was shown to exert a potent anti-tumor effect when administered intraperitoneally (LD50 > 100 mg/kg for 6, compared with 2.5 mg/kg for colchicine)., Conclusion: Compound 6 offers an opportunity to be used in cancer therapy with less toxicity problems than colchicine., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.)
- Published
- 2021
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36. Development of a Novel SPR Assay to Study CXCR4-Ligand Interactions.
- Author
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Boonen A, Singh AK, Hout AV, Das K, Loy TV, Noppen S, and Schols D
- Subjects
- Biological Assay, Humans, Ligands, Protein Binding, Receptors, CXCR4, Signal Transduction, Surface Plasmon Resonance methods
- Abstract
G protein-coupled receptors (GPCRs) are involved in a plethora of different diseases. Consequently, these proteins are considered as an important class of drug targets. Measuring detailed kinetic information on these types of proteins has been challenging. Surface plasmon resonance (SPR) can provide this information, however, the use of SPR on GPCRs remains a complex issue. Here, we report an SPR assay to investigate the interactions between the full-length chemokine receptor CXCR4 and nanobody-Fc (Nb-Fc) ligands. Nb-Fcs consist of two monovalent VHH domains fused with an Fc domain of a human IgG molecule. The CXCR4 protein used in this assay was produced with a C-terminal 10x-histidine tag and was immobilized on a nitrilotriacetic acid chip. In order to verify the sensitivity and effectiveness of this assay, the results were compared to data obtained from cellular assays as well as from another SPR assay using CXCR4 virus-like particles (VLPs). CXCR4 remained intact and stable for at least 12 h, and the kinetic results correlated well with both the cellular assays and the VLP SPR assay results. Apart from determining the binding kinetics of Nb-Fc with CXCR4, our results contributed to understanding CXCR4 interaction dynamics. In conclusion, this assay provides a viable experimental platform that has high potential to be expanded for studying other molecules as well as other histidine-tagged GPCRs.
- Published
- 2020
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37. Tryptophan Trimers and Tetramers Inhibit Dengue and Zika Virus Replication by Interfering with Viral Attachment Processes.
- Author
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Fikatas A, Vervaeke P, Martínez-Gualda B, Martí-Marí O, Noppen S, Meyen E, Camarasa MJ, San-Félix A, Pannecouque C, and Schols D
- Subjects
- Animals, Chlorocebus aethiops, Dengue Virus pathogenicity, Human Umbilical Vein Endothelial Cells, Humans, Serogroup, Structure-Activity Relationship, Vero Cells, Viral Envelope Proteins genetics, Viral Envelope Proteins metabolism, Virus Replication drug effects, Zika Virus pathogenicity, Antiviral Agents chemistry, Antiviral Agents pharmacology, Dengue Virus drug effects, Tryptophan chemistry, Tryptophan pharmacology, Zika Virus drug effects
- Abstract
Here, we report a class of tryptophan trimers and tetramers that inhibit (at low micromolar range) dengue and Zika virus infection in vitro These compounds (AL family) have three or four peripheral tryptophan moieties directly linked to a central scaffold through their amino groups; thus, their carboxylic acid groups are free and exposed to the periphery. Structure-activity relationship (SAR) studies demonstrated that the presence of extra phenyl rings with substituents other than COOH at the N1 or C2 position of the indole side chain is a requisite for the antiviral activity against both viruses. The molecules showed potent antiviral activity, with low cytotoxicity, when evaluated on different cell lines. Moreover, they were active against laboratory and clinical strains of all four serotypes of dengue virus as well as a selected group of Zika virus strains. Additional mechanistic studies performed with the two most potent compounds (AL439 and AL440) demonstrated an interaction with the viral envelope glycoprotein (domain III) of dengue 2 virus, preventing virus attachment to the host cell membrane. Since no antiviral agent is approved at the moment against these two flaviviruses, further pharmacokinetic studies with these molecules are needed for their development as future therapeutic/prophylactic drugs., (Copyright © 2020 American Society for Microbiology.)
- Published
- 2020
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38. Scaffold Simplification Strategy Leads to a Novel Generation of Dual Human Immunodeficiency Virus and Enterovirus-A71 Entry Inhibitors.
- Author
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Martínez-Gualda B, Sun L, Martí-Marí O, Noppen S, Abdelnabi R, Bator CM, Quesada E, Delang L, Mirabelli C, Lee H, Schols D, Neyts J, Hafenstein S, Camarasa MJ, Gago F, and San-Félix A
- Subjects
- Antiviral Agents chemical synthesis, Antiviral Agents metabolism, CD4-Positive T-Lymphocytes virology, Capsid Proteins metabolism, Enterovirus A, Human drug effects, HIV-1 drug effects, HIV-2 drug effects, Humans, Microbial Sensitivity Tests, Models, Molecular, Molecular Structure, Protein Binding, Structure-Activity Relationship, Tryptophan metabolism, Virus Replication drug effects, Antiviral Agents pharmacology, Tryptophan analogs & derivatives, Tryptophan pharmacology, Virus Internalization drug effects
- Abstract
Currently, there are only three FDA-approved drugs that inhibit human immunodeficiency virus (HIV) entry-fusion into host cells. The situation is even worse for enterovirus EV71 infection for which no antiviral therapies are available. We describe here the discovery of potent entry dual inhibitors of HIV and EV71. These compounds contain in their structure three or four tryptophan (Trp) residues linked to a central scaffold. Critical for anti-HIV/EV71 activity is the presence of extra phenyl rings, bearing one or two carboxylates, at the C2 position of the indole ring of each Trp residue. The most potent derivatives, 22 and 30 , inhibit early steps of the replicative cycles of HIV-1 and EV-A71 by interacting with their respective viral surfaces (glycoprotein gp120 of HIV and the fivefold axis of the EV-A71 capsid). The high potency, low toxicity, facile chemical synthesis, and great opportunities for chemical optimization make them useful prototypes for future medicinal chemistry studies.
- Published
- 2020
- Full Text
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39. A unique class of lignin derivatives displays broad anti-HIV activity by interacting with the viral envelope.
- Author
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Oeyen M, Noppen S, Vanhulle E, Claes S, Myrvold BO, Vermeire K, and Schols D
- Subjects
- Animals, Antiviral Agents chemistry, Cell Line, HIV Infections transmission, Herpes Simplex prevention & control, Herpes Simplex transmission, Herpesvirus 2, Human drug effects, Humans, Inhibitory Concentration 50, Lignin chemistry, Lignin pharmacology, Membrane Fusion drug effects, Molecular Structure, Molecular Weight, Viral Envelope Proteins chemistry, Virus Internalization drug effects, Antiviral Agents pharmacology, HIV drug effects, HIV Infections prevention & control, Lignin analogs & derivatives
- Abstract
In Gordts et al. (2015), we have shown that lignosulfonic acid, a commercially available lignin derivative, possesses broad antiviral activity against human immunodeficiency virus (HIV) and Herpes simplex virus (HSV) by preventing viral entry into susceptible target cells. Because of the interesting safety profile as potential microbicide, we now determined the antiviral activity of a series of lignosulfonates in order to understand better which molecular features can contribute to their antiviral activity. Here, 24 structurally different lignosulfonates were evaluated for their capacity to inhibit HIV and HSV transmission and replication in various cellular assays. These derivatives differ in origin (hardwood or softwood), counter-ion used during sulphite processing (Na
+ , Ca2+ , or NH4 + ), sulphur content, carboxylic acid percentage, and molecular weight fraction, which allowed to determine structure-activity relationships. We demonstrate that the broad antiviral activity of lignosulfonates is mainly dependent on their molecular weight and that their mechanism of action is based on interactions with the viral envelope glycoproteins. This makes the lignosulfonates a potential low-cost microbicide that protects women from sexual HIV and HSV transmission and thus prevents life-long infection., (Copyright © 2019 Elsevier B.V. All rights reserved.)- Published
- 2019
- Full Text
- View/download PDF
40. Gelatinase B/matrix metalloproteinase-9 and other neutrophil proteases switch off interleukin-2 activity.
- Author
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Rybakin V, Stas M, Ugarte-Berzal E, Noppen S, Vandooren J, Van Aelst I, Liekens S, Proost P, and Opdenakker G
- Subjects
- Animals, Cell Line, Humans, Interleukin-2 genetics, Matrix Metalloproteinase 9 genetics, Mice, Interleukin-2 metabolism, Matrix Metalloproteinase 9 metabolism, Neutrophils enzymology, Signal Transduction, T-Lymphocytes, Regulatory immunology
- Abstract
Interleukin 2 (IL-2) is critical for T cell development and homeostasis, being a key regulator of adaptive immune responses in autoimmunity, hypersensitivity reactions and cancer. Therefore, its abundance in serum and peripheral tissues needs tight control. Here, we described a new mechanism contributing to the immunobiology of IL-2. We demonstrated, both in biochemical and cell-based assays, that IL-2 is subject to proteolytic processing by neutrophil matrix metalloproteinase-9 (MMP-9). IL-2 fragments produced after cleavage by MMP-9 remained linked by a disulfide bond and displayed a reduced affinity for all IL-2 receptor subunits and a distinct pattern and timing of signal transduction. Stimulation of IL-2-dependent cells, including murine CTLL-2 and primary human regulatory T cells, with cleaved IL-2 resulted in significantly decreased proliferation. The concerted action of neutrophil proteases destroyed IL-2. Our data suggest that in neutrophil-rich inflammatory conditions in vivo , neutrophil MMP-9 may reduce the abundance of signaling-competent IL-2 and generate a fragment that competes with IL-2 for receptor binding, whereas the combined activity of granulocyte proteases has the potential to degrade and thus eliminate bioavailable IL-2., (© 2019 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.)
- Published
- 2019
- Full Text
- View/download PDF
41. Influenza virus entry via the GM3 ganglioside-mediated platelet-derived growth factor receptor β signalling pathway.
- Author
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Vrijens P, Noppen S, Boogaerts T, Vanstreels E, Ronca R, Chiodelli P, Laporte M, Vanderlinden E, Liekens S, Stevaert A, and Naesens L
- Subjects
- Animals, CHO Cells, Cell Line, Cricetulus, Dogs, HEK293 Cells, Humans, Influenza, Human drug therapy, Madin Darby Canine Kidney Cells, Orthomyxoviridae drug effects, Orthomyxoviridae Infections drug therapy, Phenylurea Compounds pharmacology, Phosphatidylinositol 3-Kinases metabolism, Phosphorylation physiology, Protein Kinase Inhibitors pharmacology, Quinolines pharmacology, Receptor Protein-Tyrosine Kinases metabolism, Signal Transduction drug effects, Virus Internalization drug effects, G(M3) Ganglioside metabolism, Influenza, Human metabolism, Influenza, Human virology, Orthomyxoviridae pathogenicity, Orthomyxoviridae Infections metabolism, Receptor, Platelet-Derived Growth Factor beta metabolism, Signal Transduction physiology
- Abstract
The possible resistance of influenza virus against existing antiviral drugs calls for new therapeutic concepts. One appealing strategy is to inhibit virus entry, in particular at the stage of internalization. This requires a better understanding of virus-host interactions during the entry process, including the role of receptor tyrosine kinases (RTKs). To search for cellular targets, we evaluated a panel of 276 protein kinase inhibitors in a multicycle antiviral assay in Madin-Darby canine kidney cells. The RTK inhibitor Ki8751 displayed robust anti-influenza A and B virus activity and was selected for mechanistic investigations. Ki8751 efficiently disrupted the endocytic process of influenza virus in different cell lines carrying platelet-derived growth factor receptor β (PDGFRβ), an RTK that is known to act at GM3 ganglioside-positive lipid rafts. The more efficient virus entry in CHO-K1 cells compared to the wild-type ancestor (CHO-wt) cells indicated a positive effect of GM3, which is abundant in CHO-K1 but not in CHO-wt cells. Entering virus localized to GM3-positive lipid rafts and the PDGFRβ-containing endosomal compartment. PDGFRβ/GM3-dependent virus internalization involved PDGFRβ phosphorylation, which was potently inhibited by Ki8751, and desialylation of activated PDGFRβ by the viral neuraminidase. Virus uptake coincided with strong activation of the Raf/MEK/Erk cascade, but not of PI3K/Akt or phospholipase C-γ. We conclude that influenza virus efficiently hijacks the GM3-enhanced PDGFRβ signalling pathway for cell penetration, providing an opportunity for host cell-targeting antiviral intervention.
- Published
- 2019
- Full Text
- View/download PDF
42. Potent antiviral activity of carbohydrate-specific algal and leguminous lectins from the Brazilian biodiversity.
- Author
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Gondim ACS, Roberta da Silva S, Mathys L, Noppen S, Liekens S, Holanda Sampaio A, Nagano CS, Renata Costa Rocha C, Nascimento KS, Cavada BS, Sadler PJ, and Balzarini J
- Abstract
Brazil has one of the largest biodiversities in the world. The search for new natural products extracted from the Brazilian flora may lead to the discovery of novel drugs with potential to treat infectious and other diseases. Here, we have investigated 9 lectins extracted and purified from the Northeastern Brazilian flora, from both leguminous species: Canavalia brasiliensis (ConBr), C. maritima (ConM), Dioclea lasiocarpa (DLasiL) and D. sclerocarpa (DSclerL), and algae Amansia multifida (AML), Bryothamniom seaforthii (BSL), Hypnea musciformis (HML), Meristiella echinocarpa (MEL) and Solieria filiformis (SfL). They were exposed to a panel of 18 different viruses, including HIV and influenza viruses. Several lectins showed highly potent antiviral activity, often within the low nanomolar range. DSclerL and DLasiL exhibited EC
50 values (effective concentration of lectin required to inhibit virus-induced cytopathicity by 50%) of 9 nM to 46 nM for HIV-1 and respiratory syncytial virus (RSV), respectively, DLasiL also inhibited feline corona virus at an EC50 of 5 nM, and DSclerL, ConBr and ConM showed remarkably low EC50 values ranging from 0.4 to 6 nM against influenza A virus strain H3N2 and influenza B virus. For HIV, evidence pointed to the blockage of entry of the virus into its target cells as the underlying mechanism of antiviral action of these lectins. Overall, the most promising lectins based on their EC50 values were DLasiL, DSclerL, ConBr, ConM, SfL and HML. These novel findings indicate that lectins from the Brazilian flora may provide novel antiviral compounds with therapeutic potential.- Published
- 2019
- Full Text
- View/download PDF
43. CCL20, a direct-acting pro-angiogenic chemokine induced by hepatitis C virus (HCV): Potential role in HCV-related liver cancer.
- Author
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Benkheil M, Van Haele M, Roskams T, Laporte M, Noppen S, Abbasi K, Delang L, Neyts J, and Liekens S
- Subjects
- Animals, Carcinoma, Hepatocellular pathology, Carcinoma, Hepatocellular virology, Chemotaxis genetics, Endothelial Cells physiology, Endothelial Cells virology, Gene Expression Regulation, Neoplastic, Hepacivirus genetics, Hepacivirus pathogenicity, Human Umbilical Vein Endothelial Cells, Humans, Liver metabolism, Liver pathology, Liver virology, Liver Neoplasms pathology, Liver Neoplasms virology, Mice, Neovascularization, Pathologic pathology, Neovascularization, Pathologic virology, Tumor Microenvironment genetics, Carcinoma, Hepatocellular genetics, Chemokine CCL20 genetics, Liver Neoplasms genetics, Neovascularization, Pathologic genetics, Receptors, CCR6 genetics
- Abstract
The CCL20/CCR6 chemokine/receptor axis has previously been shown to contribute to the initiation and progression of hepatocellular carcinoma (HCC) through the recruitment of CCR6-positive leukocytes to the tumor microenvironment. In particular, high serum levels of CCL20 are reported in patients with HCC induced by the hepatitis C virus (HCV). A potential non-immune role for the CCL20/CCR6 axis in HCC development has not yet been investigated. Microarray analysis (Benkheil et al., paper submitted for publication), revealed that CCL20 is highly upregulated in hepatoma cells infected with HCV compared with non-infected hepatoma cells. To determine the role of the CCL20/CCR6 axis in HCV-related HCC, we first explored which cell populations express CCR6 in human liver tissue with chronic disease or HCC. Immunohistochemical (IHC) analysis revealed that CCR6 is present on endothelial cells (ECs) of portal blood vessels in livers with chronic HCV infection and in HCV- and alcoholic-HCC tissue. In addition, we found CCR6 to be expressed on primary macrovascular (HUVECs) and microvascular ECs (HMVEC-ds) where it co-expressed with the endothelial marker CD31. In vitro angiogenesis experiments revealed that CCL20 is a direct pro-angiogenic molecule that induces EC invasion, sprouting and migration through CCR6. Moreover, using the angiogenesis matrigel plug assay in immunodeficient NMRI-nu mice, we clearly showed that CCL20 induces blood vessel formation, by attracting CCR6-positive ECs. Finally, we demonstrated that HCV-induced CCL20 protein expression and secretion in hepatoma cells could be abolished by antiviral treatment, indicating that CCL20 expression is dependent on HCV replication. In contrast to HCV, HBV-infection resulted in a decreased expression of CCL20, implying a virus-specific effect. Taken together, we identified HCV-induced CCL20 as a direct pro-angiogenic factor that acts on endothelial CCR6. These results suggest that the CCL20/CCR6 axis contributes to hepatic angiogenesis, promoting the hypervascular state of HCV-HCC., (Copyright © 2018 Elsevier Inc. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
44. Synthesis of a 3'-C-ethynyl-β-d-ribofuranose purine nucleoside library: Discovery of C7-deazapurine analogs as potent antiproliferative nucleosides.
- Author
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Hulpia F, Noppen S, Schols D, Andrei G, Snoeck R, Liekens S, Vervaeke P, and Van Calenbergh S
- Subjects
- Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Cell Line, Tumor, Cell Proliferation drug effects, Cytomegalovirus drug effects, Dose-Response Relationship, Drug, Drug Screening Assays, Antitumor, Humans, Microbial Sensitivity Tests, Molecular Structure, Nucleosides chemical synthesis, Nucleosides chemistry, Purine Nucleosides chemical synthesis, Purine Nucleosides chemistry, Small Molecule Libraries chemical synthesis, Small Molecule Libraries chemistry, Structure-Activity Relationship, Vaccinia virus drug effects, Antineoplastic Agents pharmacology, Antiviral Agents pharmacology, Drug Discovery, Nucleosides pharmacology, Purine Nucleosides pharmacology, Small Molecule Libraries pharmacology
- Abstract
A focused nucleoside library was constructed around a 3'-C-ethynyl-d-ribofuranose sugar scaffold, which was coupled to variously modified purine nucleobases. The resulting nucleosides were probed for their ability to inhibit tumor cell proliferation, as well as for their activity against a panel of relevant human viruses. While C6-aryl substituted purine nucleosides were found to be weakly active, several C7-substituted 7-deazapurine nucleosides elicited potent antiproliferative activity. Their activity spectrum was evaluated in the NCI-60 tumor cell line panel indicating activity against several solid tumor derived cell lines. Analog 32, equipped with a 7-deaza 7-chloro-6-amino-purin-9-yl base was evaluated in a metastatic breast tumor (MDA-MB-231-LM2) xenograft model. It inhibited both tumor growth and reduced the formation of lung metastases as revealed by BLI analysis. The dideazanucleoside analog 66 showed interesting activity against hCMV. These results highlight the potential advantages of recombining known sugar and nucleobase motifs as a library design strategy to discover novel antiviral or antitumor agents., (Copyright © 2018 Elsevier Masson SAS. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
45. Peroxynitrite Exposure of CXCL12 Impairs Monocyte, Lymphocyte and Endothelial Cell Chemotaxis, Lymphocyte Extravasation in vivo and Anti-HIV-1 Activity.
- Author
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Janssens R, Boff D, Ruytinx P, Mortier A, Vanheule V, Larsen O, Daugvilaite V, Rosenkilde MM, Noppen S, Liekens S, Schols D, De Meester I, Opdenakker G, Struyf S, Teixeira MM, Amaral FA, and Proost P
- Subjects
- Animals, CHO Cells, Chemotaxis immunology, Cricetulus, Lymphocytes cytology, Mice, Monocytes cytology, Receptors, CXCR4 chemistry, Receptors, CXCR4 immunology, Chemokine CXCL12 chemistry, Chemokine CXCL12 immunology, Chemotaxis drug effects, Endothelial Cells immunology, Lymphocytes immunology, Monocytes immunology, Peroxynitrous Acid chemistry, Peroxynitrous Acid pharmacology, Signal Transduction drug effects
- Abstract
CXCL12 is a chemotactic cytokine that attracts many different cell types for homeostasis and during inflammation. Under stress conditions, macrophages and granulocytes produce factors such as peroxynitrite as a consequence of their oxidative response. After short incubations of CXCL12 with peroxynitrite, the gradual nitration of Tyr7, Tyr61, or both Tyr7 and Tyr61 was demonstrated with the use of mass spectrometry, whereas longer incubations caused CXCL12 degradation. Native CXCL12 and the nitrated forms, [3-NT
61 ]CXCL12 and [3-NT7/61 ]CXCL12, were chemically synthesized to evaluate the effects of Tyr nitration on the biological activity of CXCL12. All CXCL12 forms had a similar binding affinity for heparin, the G protein-coupled chemokine receptor CXCR4 and the atypical chemokine receptor ACKR3. However, nitration significantly enhanced the affinity of CXCL12 for chondroitin sulfate. Internalization of CXCR4 and β-arrestin 2 recruitment to CXCR4 was significantly reduced for [3-NT7/61 ]CXCL12 compared to CXCL12, whereas β-arrestin 2 recruitment to ACKR3 was similar for all CXCL12 variants. [3-NT7/61 ]CXCL12 was weaker in calcium signaling assays and in i n vitro chemotaxis assays with monocytes, lymphocytes and endothelial cells. Surprisingly, nitration of Tyr61, but not Tyr7, partially protected CXCL12 against cleavage by the specific serine protease CD26. In vivo , the effects were more pronounced compared to native CXCL12. Nitration of any Tyr residue drastically lowered lymphocyte extravasation to joints compared to native CXCL12. Finally, the anti-HIV-1 activity of [3-NT7 ]CXCL12 and [3-NT7/61 ]CXCL12 was reduced, whereas CXCL12 and [3-NT61 ]CXCL12 were equally potent. In conclusion, nitration of CXCL12 occurs readily upon contact with peroxynitrite and specifically nitration of Tyr7 fully reduces its in vitro and in vivo biological activities.- Published
- 2018
- Full Text
- View/download PDF
46. Modulation of BACE1 Activity by Chemically Modified Aptamers.
- Author
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Gasse C, Zaarour M, Noppen S, Abramov M, Marlière P, Liekens S, De Strooper B, and Herdewijn P
- Subjects
- Adenine analogs & derivatives, Adenine chemistry, Aptamers, Nucleotide chemistry, Base Sequence, Humans, Protein Binding, SELEX Aptamer Technique, Uracil analogs & derivatives, Uracil chemistry, Amyloid Precursor Protein Secretases antagonists & inhibitors, Amyloid Precursor Protein Secretases metabolism, Aptamers, Nucleotide metabolism, Aspartic Acid Endopeptidases antagonists & inhibitors, Aspartic Acid Endopeptidases metabolism
- Abstract
A modified DNA aptamer that binds BACE1, a therapeutic target involved in Alzheimer's disease has been developed. This ssXNA not only tightly binds to BACE1 but also inhibits its protease activity in vitro in the same range as a previously described unmodified aptamer. We report the in vitro selection of functional oligonucleotides incorporating two nucleobase modifications: 5-chlorouracil and 7-deazaadenine. The nucleoside analogue 5-chloro-2'-deoxyuridine has already been explored as a replacement for thymidine in a chemically modified genome of a bacterium. Thus, 5-chlorouracil modification is a good candidate to support genetic transfer in vivo as well as functional activity., (© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2018
- Full Text
- View/download PDF
47. Conformational mimetics of the α-methyl chalcone TUB091 binding tubulin: Design, synthesis and antiproliferative activity.
- Author
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Bueno O, Tobajas G, Quesada E, Estévez-Gallego J, Noppen S, Camarasa MJ, Díaz JF, Liekens S, Priego EM, and Pérez-Pérez MJ
- Subjects
- Animals, Antineoplastic Agents chemistry, Antineoplastic Agents pharmacology, Benzodioxoles metabolism, Binding Sites, Biomimetics, Cell Line, Cell Proliferation drug effects, Drug Design, Endothelial Cells drug effects, Humans, Neoplasms drug therapy, Neoplasms pathology, Protein Conformation, Tubulin Modulators, Antineoplastic Agents chemical synthesis, Chalcones metabolism, Tubulin metabolism
- Abstract
Based on the conformation of the α-methyl chalcone TUB091 in its complex with tubulin, a series of conformational mimetics have been designed and synthesized where the methyl group of the chalcone has been fused to phenyl ring B resulting in 1,2,3,4-tetrahydronaphthalen-2-yl aryl ketones. Among the synthesized compounds, the 5-amino-6-methoxy derivative, with a similar substitution pattern to that of TUB091, showed antiproliferative activity around 20 nM against tumor and endothelial cells. Tubulin binding experiments confirmed its binding to tubulin at the colchicine site with a Kb of 2.4 × 10
6 M-1 resulting in the inhibition of the in vitro assembly of purified tubulin. Moreover, based on the recently reported complex of combretastatin A4 (CA4) with tubulin, a comparative analysis of the binding mode of CA4 and the α-methyl chalcone to tubulin has been performed., (Copyright © 2018 Elsevier Masson SAS. All rights reserved.)- Published
- 2018
- Full Text
- View/download PDF
48. An allosteric binding site of the α7 nicotinic acetylcholine receptor revealed in a humanized acetylcholine-binding protein.
- Author
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Delbart F, Brams M, Gruss F, Noppen S, Peigneur S, Boland S, Chaltin P, Brandao-Neto J, von Delft F, Touw WG, Joosten RP, Liekens S, Tytgat J, and Ulens C
- Subjects
- Acetylcholine chemistry, Allosteric Regulation, Allosteric Site, Animals, Crystallography, X-Ray, Humans, Models, Molecular, Protein Domains, Receptors, Nicotinic chemistry, Receptors, Nicotinic genetics, Receptors, Nicotinic metabolism, Snails, alpha7 Nicotinic Acetylcholine Receptor genetics, Acetylcholine metabolism, alpha7 Nicotinic Acetylcholine Receptor chemistry, alpha7 Nicotinic Acetylcholine Receptor metabolism
- Abstract
Nicotinic acetylcholine receptors (nAChRs) belong to the family of pentameric ligand-gated ion channels and mediate fast excitatory transmission in the central and peripheral nervous systems. Among the different existing receptor subtypes, the homomeric α7 nAChR has attracted considerable attention because of its possible implication in several neurological and psychiatric disorders, including cognitive decline associated with Alzheimer's disease or schizophrenia. Allosteric modulators of ligand-gated ion channels are of particular interest as therapeutic agents, as they modulate receptor activity without affecting normal fluctuations of synaptic neurotransmitter release. Here, we used X-ray crystallography and surface plasmon resonance spectroscopy of α7-acetylcholine-binding protein (AChBP), a humanized chimera of a snail AChBP, which has 71% sequence similarity with the extracellular ligand-binding domain of the human α7 nAChR, to investigate the structural determinants of allosteric modulation. We extended previous observations that an allosteric site located in the vestibule of the receptor offers an attractive target for receptor modulation. We introduced seven additional humanizing mutations in the vestibule-located binding site of AChBP to improve its suitability as a model for studying allosteric binding. Using a fragment-based screening approach, we uncovered an allosteric binding site located near the β8-β9 loop, which critically contributes to coupling ligand binding to channel opening in human α7 nAChR. This work expands our understanding of the topology of allosteric binding sites in AChBP and, by extrapolation, in the human α7 nAChR as determined by electrophysiology measurements. Our insights pave the way for drug design strategies targeting nAChRs involved in ion channel-mediated disorders., (© 2018 by The American Society for Biochemistry and Molecular Biology, Inc.)
- Published
- 2018
- Full Text
- View/download PDF
49. New findings on the d(TGGGAG) sequence: Surprising anti-HIV-1 activity.
- Author
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Romanucci V, Zarrelli A, Liekens S, Noppen S, Pannecouque C, and Di Fabio G
- Subjects
- Anti-HIV Agents chemistry, Base Sequence, Dose-Response Relationship, Drug, G-Quadruplexes, Kinetics, Microbial Sensitivity Tests, Molecular Structure, Oligodeoxyribonucleotides chemistry, Structure-Activity Relationship, Anti-HIV Agents pharmacology, HIV Infections drug therapy, HIV-1 drug effects, Oligodeoxyribonucleotides pharmacology
- Abstract
The biological relevance of tetramolecular G-quadruplexes especially as anti-HIV agents has been extensively reported in the literature over the last years. In the light of our recent results regarding the slow G-quadruplex folding kinetics of ODNs based on d(TGGGAG) sequence, here we report a systematic anti-HIV screening to investigate the impact of the G-quadruplex folding on their anti-HIV activity. In particular, varying the single stranded concentrations of ODNs, it has been tested a pool of ODN sample solutions with different G-quadruplex concentrations. The anti-HIV assays have been designed favouring the limited kinetics involved in the tetramolecular G4-association based on the d(TGGGAG) sequence. Aiming to determine the stoichiometry of G-quadruplex structures in the same experimental conditions of the anti-HIV assays, a native gel electrophoresis was performed. The gel confirmed the G-quadruplex formation for almost all sample solutions while showing the formation of high order G4 structures for the more concentrated ODNs solutions. The most significant result is the discovery of a potent anti-HIV activity of the G-quadruplex formed by the natural d(TGGGAG) sequence (IC
50 = 14 nM) that, until now, has been reported to be completely inactive against HIV infection., (Copyright © 2018 Elsevier Masson SAS. All rights reserved.)- Published
- 2018
- Full Text
- View/download PDF
50. Interferon lambda (IFN-λ) efficiently blocks norovirus transmission in a mouse model.
- Author
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Rocha-Pereira J, Jacobs S, Noppen S, Verbeken E, Michiels T, and Neyts J
- Subjects
- Animals, Antibodies, Viral immunology, Caliciviridae Infections mortality, Caliciviridae Infections virology, Cell Line, Disease Models, Animal, Gene Expression, Gene Expression Regulation, Immunoglobulin G immunology, Interferon Regulatory Factors genetics, Interferon Regulatory Factors metabolism, Interferons blood, Interferons metabolism, Intestine, Small metabolism, Intestine, Small pathology, Intestine, Small virology, Mice, Plasmids genetics, Virus Replication, Caliciviridae Infections genetics, Caliciviridae Infections transmission, Interferons genetics, Norovirus physiology
- Abstract
Human noroviruses are highly efficient in person to person transmission thus associated with explosive outbreaks of acute gastroenteritis. Outbreak control is limited to disinfection and isolation measures. Strategies to control the spread of noroviruses should be developed and models to study norovirus transmission will greatly facilitate this. Here, a mouse-to-mouse transmission model, in which mice develop acute murine norovirus (MNV)-induced diarrhea, was used to explore the role of interferon lambda (IFN-λ) in the control of a norovirus infection. Sentinel AG129 mice [deficient in IFN-α/β and IFN-γ receptors] that were co-housed with MNV-infected mice shedding high amounts of virus in their stool, developed a MNV-infection with associated diarrhea. Inoculation of such sentinel mice with an IFN-λ expression plasmid resulted in the production of circulating IFN-λ and upregulation of the expression of IFN-stimulated genes (ISGs) of the gut. Injection of the IFN-λ-expressing plasmid to sentinels prevents MNV-induced disease upon exposure to MNV-infected mice, as well as MNV replication in the small intestine, the associated signs of inflammation and the mounting of a specific IgG-based immune response. This demonstrates that IFN-λ can alone mediate protection against transmission of norovirus. The development of a simple delivery method for IFN-λ could be explored as a strategy to control norovirus outbreaks and protect vulnerable populations such as the elderly and immunocompromised., (Copyright © 2017. Published by Elsevier B.V.)
- Published
- 2018
- Full Text
- View/download PDF
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