39 results on '"Non-structural"'
Search Results
2. Creating Open Spaces, Modification, and Improvement of Access Network: The Case of Central Area of the City of Rasht
- Author
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Bahrainy, Hossein, Bakhtiar, Ameneh, Angelidou, Margarita, Editorial Board Member, Farnaz Arefian, Fatemeh, Editorial Board Member, Batty, Michael, Editorial Board Member, Davoudi, Simin, Editorial Board Member, DeVerteuil, Geoffrey, Editorial Board Member, González Pérez, Jesús M., Editorial Board Member, Hess, Daniel B., Editorial Board Member, Jones, Paul, Editorial Board Member, Karvonen, Andrew, Editorial Board Member, Kirby, Andrew, Editorial Board Member, Kropf, Karl, Editorial Board Member, Lucas, Karen, Editorial Board Member, Maretto, Marco, Editorial Board Member, Modarres, Ali, Editorial Board Member, Neuhaus, Fabian, Editorial Board Member, Nijhuis, Steffen, Editorial Board Member, Aráujo de Oliveira, Vitor Manuel, Editorial Board Member, Silver, Christopher, Editorial Board Member, Strappa, Giuseppe, Editorial Board Member, Vojnovic, Igor, Editorial Board Member, Yamu, Claudia, Editorial Board Member, Zhao, Qunshan, Editorial Board Member, Bahrainy, Hossein, and Bakhtiar, Ameneh
- Published
- 2022
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3. Experimental Study of the Effects of Internal Non-structural Thermal Mass on the Thermal Inertia of the Whole Building
- Author
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Li, Weilin, Zhu, Jiayin, Li, Ruixin, Ning, Baisong, Förstner, Ulrich, Series Editor, Rulkens, Wim H., Series Editor, Salomons, Wim, Series Editor, Wang, Zhaojun, editor, Zhu, Yingxin, editor, Wang, Fang, editor, Wang, Peng, editor, Shen, Chao, editor, and Liu, Jing, editor
- Published
- 2020
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- View/download PDF
4. Quantitative hazard analysis and mitigation measures of rockfall in a high-frequency rockfall region.
- Author
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Jiang, Nan, Li, Hai-bo, and Zhou, Jia-wen
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HAZARD mitigation , *ROCKFALL , *QUANTITATIVE research , *ROCK slopes , *ALTITUDES , *MAINTENANCE costs - Abstract
The runout behavior of rockfall is mostly determined by the terrain and its mechanical parameters. The two factors can be significantly changed in a short period of time due to rockfall deposits in high-frequency rockfall regions. In this paper, a self-evolution process of rockfall from the Hongshiyan post-earthquake rock slope is observed and analyzed. This self-evolution process of the rockfall is the consequence of the re-occurrences of a large number of rockfall events in a short period of time, which lead to an increase in the elevation, slope angle, and hardness of the terrain, and aggravate further the severity of subsequent rockfall disasters. In order to analyze the self-evolution process, numerical simulations based on a probabilistic model were carried out on eight different conditions to analyze the interaction between the rockfall and different ground surface. The corresponding rockfall hazard was then analyzed according to a quantitative assessment method. The statistics of the average class (AC) and mitigation index (MI) of the rockfall were proposed to quantify the rockfall characteristics in different conditions. The effectiveness of structural and non-structural rockfall protection measures in high-frequency rockfall areas was discussed. An interim non-structural measure that addresses the self-evolution of rockfall is proposed to improve the mitigation efficiency, which can also reduce the maintenance cost. [ABSTRACT FROM AUTHOR]
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- 2021
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5. Choosing the most appropriate modern materials for implementing non-loaded walls in building using the hierarchical analysis method
- Author
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Maryam Lotfi, Mohammad Hadi Alizade Elizei, and Hassan Ahmadi
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analytic hierarchy process ,non-loaded walls ,hospital ,modern materials ,drywall ,non-structural ,Bridge engineering ,TG1-470 ,Building construction ,TH1-9745 - Abstract
The major damage observed in recent earthquakes is the separation of non-structural walls from structural components and large longitudinal and diagonal cracks in them; so, selecting the appropriate wall is very important. Considering the diversity of the existing walls and the multiplicity of the criteria, making an inclusive decision for choosing the most practical wall which considers all the relevant criteria seems necessary. Therefore, Analytical Hierarchy Process method was used for analysis in this paper. This method is compatible with multiple criteria and decision making purposes. In order to identify and determine the importance of effective criteria in choosing the appropriate wall, the Empirical comparisons have been used and for a more accurate comparison between the types of walls based on quantitative criteria, in addition to the questionnaire, numerical modeling has also been used. criteria include design criterion, performance criterion, economic criterion, and time criterion. Finally, using the hierarchical analysis method, the suitable types of walls in seismic areas have been prioritized. The materials used to evaluate the non-loaded walls are: 3D-panels, drywalls, cement blocks containing lightweight expanded clay aggregate (lECA), Autoclaved aerated concrete. The gained results of the study indicate that in order to achieve a safe and earthquake-resistant hospital structure, the drywalls is considered to be the best option and autoclaved aerated concrete as well as blocks options the light expanded clay aggregate and 3D-panel were selected respectively.
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- 2020
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6. Comparison of traditional vs low-damage structural and non-structural building systems through a cost/performance-based evaluation.
- Author
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Bianchi, Simona, Ciurlanti, Jonathan, and Pampanin, Stefano
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EARTHQUAKE damage ,NUMERICAL analysis ,SPECTRUM analysis ,CEILINGS ,SKELETON - Abstract
Innovative damage-mitigation technologies have been recently developed to improve the seismic performance of structural and non-structural elements. The combination of these solutions can lead to a high-performance and cost-efficient building system, capable of sustaining earthquakes with limited damage and reduced socio-economic losses. This article investigates the convenience of implementing damage-control solutions through a cost/performance-based evaluation of multi-story-reinforced concrete buildings, comprising alternative combinations of traditional vs low-damage technologies for both structural skeletons (frames, walls) and non-structural elements (heavy/light facades, heavy/light partitions, suspended ceilings). The significant benefits of the innovative systems are investigated through loss assessment studies, implemented using a practical approach based on numerical pushover analyses and the capacity spectrum method. The parametric analyses confirm that the integrated low-damage structural/non-structural system can lead to significant savings, in these specific cases, in the range of 150–300 €/m
2 during the 50-year building-life and downtime reductions at ultimate limit state in the order of 2–7 months. [ABSTRACT FROM AUTHOR]- Published
- 2021
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7. A Heuristic Lowest Unknown-Degree Target Search Strategy Under Non-Structured Environment for Multi-Agent Systems.
- Author
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Wang, Chunye and Chen, Chen
- Subjects
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TECHNOLOGICAL innovations , *UNDERWATER exploration , *MULTIAGENT systems , *WIRELESS communications , *ESCHERICHIA coli - Abstract
Multi-target searching is a hotspot and foundation topic in multi-agent systems research. However, most of the research is based on simple environment or known environment, which greatly limits the application of target search. In the non-structured environment, the searching result can be greatly affected by the complex terrain constraints and detectability of targets especially when we have no prior knowledge about the environment. In the paper, a novel search strategy combining maximum visibility and particle swarm optimization is proposed for the target search problem in a completely unknown and non-structural environment. The strategy utilizes the concept of visibility to describe how well the agent detects the map, and guides the agent to perform online path planning to complete the search task. In addition, considering the limited communication distance and communication bandwidth, the strategy introduces a cooperative mechanism for each agent to improve the search efficiency. Finally, in the experimental part, the search strategy is compared with the commonly used search strategies. Compared with the methods combining advantages, the proposed strategy can still achieve similar results, which proves the feasibility and efficiency of the strategy. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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8. Stay vane and wicket gate relationship study
- Author
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None, None
- Published
- 2005
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9. Behaviour change: Trialling a novel approach to reduce industrial stormwater pollution.
- Author
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Boulet, M., Ghafoori, E., Jorgensen, B.S., and Smith, L.D.G.
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STORMWATER infiltration , *BEHAVIOR modification , *WATER pollution prevention , *LITTER (Trash) , *ENVIRONMENTAL regulations - Abstract
The evidence base for the performance and effectiveness of non-structural measures to manage stormwater pollution in industrial areas is relatively underdeveloped, despite their increased use in practice. This study aims to advance stormwater management practice and research by presenting a detailed case study of the development, implementation and evaluation of a targeted behaviour change trial that engaged small to medium industrial businesses in stormwater pollution prevention. Utilising a combination of different behaviour change strategies - including capacity building, social norms and commitment - a number of preventative stormwater pollution behaviours were changed in participating businesses. Our study provides a practice model for tackling stormwater pollution from a behavioural perspective that can be further developed by both practitioners and researchers to create effective and long-lasting change. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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10. Wall building stiffness and strength effect on content sliding in Wellington seismic conditions.
- Author
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Yeow, Trevor Z., MacRae, Gregory A., and Dhakal, Rajesh P.
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CONSTRUCTION ,EQUATIONS ,STRUCTURAL design ,CONCRETE - Abstract
A numerical study of unobstructed content sliding within several low-to-midrise reinforced concrete cantilever wall buildings designed to Wellington conditions in New Zealand is performed to validate the belief that increasing a building's strength and/or stiffness would result in more severe sliding response. It was shown that contents within stronger buildings experienced larger sliding response. If the building was designed to be strong, the sliding response of contents with a friction coefficient of 0.1 was smaller in stiffer buildings compared with those in flexible buildings. However, the trends start reversing with an increase in friction coefficient or a decrease in building strength. Overall, content sliding is not necessarily more severe in stiffer buildings, and in many cases, the opposite is true. This study's findings were compared against an existing parametric equation for estimating the maximum sliding displacement. This equation, which was originally derived for contents located within elastic frame buildings, was found to be more efficient than considering total floor accelerations alone but was underconservative by a mean of 17% for yielding multistorey buildings. A design procedure considering content sliding using the parametric equation and an example are provided. Copyright © 2016 John Wiley & Sons, Ltd. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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11. FLOOD RESILIENCE AND SUSTAINABLE DEVELOPMENT IN URBAN NIGERIA: INTEGRATING TRADITIONAL AND NON-STRUCTURAL METHODS OF MITIGATING AND ADAPTING TO FLOODING IN CROSS RIVER STATE, SOUTH-EASTERN NIGERIA (II)
- Author
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RICHARD INGWE
- Subjects
flood ,non-structural ,structural ,regional ,community ,Cross River State ,Calabar ,Geography. Anthropology. Recreation ,Geography (General) ,G1-922 - Abstract
Flood resilience and sustainable development in urban Nigeria: integrating traditional and non-structural methods of mitigating and adapting to flooding in cross river state, south-eastern Nigeria. We examined application of non-structural measures in addition to conventional structural approaches by Government Agency and community for flood management in Cross River State (Nigeria) at: regional-ambit and community levels. We used focus group discussion in depth interview, and observation methods to collect data from primary and secondary sources. Our findings include: emphasis on structural flood control measures by government agencies contrasted to use of rudimentary non-structural approaches by communities. Conceptual frames proposed for managing disasters include: emphasizing future climate change impacts based on multiple scales (temporal, spatial and societal) and emphasizing historical response to disasters without increasing the visibility of climate change. We conclude that community institutions, non-government/civil society organizations should lead public institutions in promoting flood resilience based on integrated non-structural to structural measures and show recent developments regarding civil society coalition committed towards promoting environmental governance in Nigeria. Frequent flooding associated with huge losses of lives and property in the study areas, as in most of urban Nigeria, persuade us to recommend that strategically placed civil society be supported by donor/funding organizations to promote integrated non-structural and traditional-structural measures to achieve urban flood resilience nationwide.
- Published
- 2013
12. FLOOD RESILIENCE AND SUSTAINABLE DEVELOPMENT IN URBAN NIGERIA: INTEGRATING TRADITIONAL AND NON-STRUCTURAL METHODS OF MITIGATING AND ADAPTING TO FLOODING IN CROSS RIVER STATE, SOUTH-EASTERN NIGERIA (I)
- Author
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RICHARD INGWE
- Subjects
flood ,non-structural ,structural ,regional ,community ,Cross River State ,Calabar. ,Geography. Anthropology. Recreation ,Geography (General) ,G1-922 - Abstract
Flood resilience and sustainable development in urban Nigeria: integrating traditional and non-structural methods of mitigating and adapting to flooding in cross river state, south-eastern Nigeria. We examined application of non-structural measures in addition to conventional structural approaches by Government Agency and community for flood management in Cross River State (Nigeria) at: regional-ambit and community levels. We used focus group discussion in depth interview, and observation methods to collect datafrom primary and secondary sources. Our findings include: emphasis on structural flood control measures by government agencies contrasted to use of rudimentary non-structural approaches by communities. Conceptual frames proposed for managing disasters include: emphasizing future climate change impacts based on multiple scales (temporal, spatial and societal) and emphasizing historical response to disasters without increasing the visibility of climate change. We conclude that community institutions, non-government/civil society organizations should lead public institutions in promoting flood resilience based on integrated non-structural to structural measures and show recent developments regarding civil society coalition committed towards promoting environmental governance in Nigeria. Frequent flooding associated with huge losses of lives and property in the studyareas, as in most of urban Nigeria, persuade us to recommend that strategically placed civil society be supported by donor/funding organizations to promote integrated non-structural and traditional-structural measures to achieve urban flood resilience nationwide.
- Published
- 2012
13. Hospital Safety Index in Hospitals Affiliated with Alborz University of Medical Sciences in 2015
- Author
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Fariba Rahimi, Sima Feizolahzadeh, Alireza Momeni, Yazdan Mohsenzadeh, and Ahmad Elahi
- Subjects
Structural ,business.industry ,lcsh:Disasters and engineering ,medicine ,Medical emergency ,lcsh:TA495 ,Non-structural ,medicine.disease ,business ,Safety index ,disasters ,Hospital Safety Index - Abstract
Introduction: To survive is the first concern of people after disasters. The ability to keep performing and offering services in hospitals at the same time as appropriate responding to the medical needs of disaster victims, matters tremendously. An effective element in this regard is having appropriate safety level in hospitals. The aim of this study was to specify the safety index of hospitals covered by Alborz University of Medical Sciences. Methods: This descriptive-provisional study was conducted between 2014 and 2015 in Alborz province. Nine public hospitals, affiliated with Alborz University of Medical Sciences, were chosen by the means of census method. The data collection tool was the standard tool of hospital safety index, WHO / PAHO, through which the level of hospital safety (in three structural, non-structural and functional areas) were determined. Data were analyzed through Excel software. The outcomes were rated between zero to one, and accordingly, in terms of safety, hospitals were classified as either A, B or C. Results: Based on the results of this study, most of the examined hospitals were at B level of safety. Although the group B hospitals can put up with disasters in time but, their vital equipment and services will be put at jeopardy. Conclusion: Measuring the safety index of hospitals as well as determining their level of safety, it can be figured out how much a hospital can preserve its organization and function in disasters. This index will be helpful for decision makers and policymakers, when it comes to prioritizing management and civil interventions.
- Published
- 2019
14. Estimating floor spectra in multiple degree of freedom systems.
- Author
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Calvi, Paolo M. and Sullivan, Timothy J.
- Subjects
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DEGREES of freedom , *BUILDING performance , *ENGINEERS , *RELIABILITY in engineering , *EARTHQUAKE resistant design - Abstract
As the desire for high performance buildings increases, it is increasingly evident that engineers require reliable methods for the estimation of seismic demands on both structural and non-structural components. To this extent, improved tools for the prediction of floor spectra would assist in the assessment of acceleration sensitive non-structural and secondary components. Recently, a new procedure was successfully developed and tested for the simplified construction of floor spectra, at various levels of elastic damping, atop single-degree-of-freedom structures. This paper extends the methodology to multi-degree-of-freedom (MDOF) supporting systems responding in the elastic range, proposing a simplified modal combination approach for floor spectra over upper storeys and accounting for the limited filtering of the ground motion input that occurs over lower storeys. The procedure is tested numerically by comparing predictions with floor spectra obtained from time-history analyses of RC wall structures of 2- to 20-storeys in height. Results demonstrate that the method performs well for MDOF systems responding in the elastic range. Future research should further develop the approach to permit the prediction of floor spectra in MDOF systems that respond in the inelastic range. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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15. A non-structural approach to assess competitive conditions in container liner shipping market: 2009-2014
- Author
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Enna Hirata
- Subjects
long-run effects ,demand elasticities ,CLS ,Transportation ,Management Science and Operations Research ,dynamic model ,competitive ,Monopolistic competition ,CLs upper limits ,container liner shipping ,competitive conditions ,Management of Technology and Innovation ,short-run effects ,shipping market ,Econometrics ,monopolistic ,non-structural ,Business and International Management ,shipping ,Structural approach ,Panzar-Rosse h-statistic ,logistics ,competition degree ,Container (abstract data type) ,transport ,Business ,Liner shipping - Abstract
This paper aims to assess the demand elasticities and competitive conditions in container liner shipping (henceforth: CLS) market. Using a dynamic model, the regression results reveal that the degree of competition measured by Panzar-Rosse (P-R) H statistic varies from 0.37 to 0.97 for the period of 2009 to 2014. It implies that CLS market can be described as displaying monopolistic competitive behaviour. The conclusion is consistent with previous studies conducted for earlier periods; moreover, the increasing trend of P-R H statistic value implies increasing degree of competition in the industry. The findings contribute to the understanding of theoretical explanation of competitive condition in latest CLS market. Unlike other studies, this paper establishes a dynamic model that makes it possible to measure both short-run and long-run effects.
- Published
- 2018
16. BIM and machine learning in seismic damage prediction for non-structural exterior infill walls.
- Author
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Mousavi, Milad, TohidiFar, Ali, and Alvanchi, Amin
- Subjects
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WALLS , *MACHINE learning , *EXTERIOR walls , *BUILDING information modeling , *EARTHQUAKE damage , *RESILIENT design - Abstract
Despite the seismic vulnerability of non-structural Exterior Infill Walls (EIWs), their resilient design has received minimal attention. This study addresses the issue by proposing a novel framework for predicting possible damage states of EIWs. The framework benefits from an automated combination of Building Information Modeling as a visualized 3D database of the building's components and the Machine Learning classification as the prediction engine. The framework's applicability is studied in a Proof of Concept example of the exterior walls of the buildings damaged in the 2017 earthquake in Kermanshah, Iran. The Extremely Randomized Trees classifier produced the best results for predicting new cases with an overall accuracy of %86. The trained model is used to develop a system for predicting the damage states of EIWs of a new building. The proposed framework works as a complementary tool in buildings' design and operation phases to enhance EIWs' seismic resilience. • Proposed a novel damage prediction framework for non-structural building systems. • Combined Building Information Modeling and Machine Learning Classification. • Applied the framework to the exterior infill walls in Kermanshah earthquake example. • Identified seismic stability features of exterior infill walls from the literature. • Framework represented %86 accuracy using the Extremely Randomized Trees classifier. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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17. ESTUDIO Y DESARROLLO DE EXPLORACIÓN ROBÓTICA AUTÓNOMA CON DISCRIMINACIÓN SELECTIVA DE OBJETOS MEDIANTE EL USO DE DETECCIÓN DE OBJETOS DE APRENDIZAJE PROFUNDO
- Author
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Sánchez Salmerón, Antonio José, Universitat Politècnica de València. Departamento de Ingeniería de Sistemas y Automática - Departament d'Enginyeria de Sistemes i Automàtica, Universitat Politècnica de València. Escuela Técnica Superior de Ingenieros Industriales - Escola Tècnica Superior d'Enginyers Industrials, Blom-Dahl Casanova, Christen, Sánchez Salmerón, Antonio José, Universitat Politècnica de València. Departamento de Ingeniería de Sistemas y Automática - Departament d'Enginyeria de Sistemes i Automàtica, Universitat Politècnica de València. Escuela Técnica Superior de Ingenieros Industriales - Escola Tècnica Superior d'Enginyers Industrials, and Blom-Dahl Casanova, Christen
- Abstract
[ES] Dado que el mundo geopolítico ya no está polarizado, la competitividad del mercado aumenta como nunca antes para sobrevivir como organización industrial, es clave ser competitivo. Es decir, reduciendo costos y tiempos de producción entre otras necesidades. Los robots móviles son recursos que consiguen aliviar esas necesidades ya que pueden sustituir a los humanos y tener un mejor rendimiento. Esto provoca una caída casuística de los problemas humanos, la reasignación de recursos humanos a puestos de trabajo más creativos que no pueden ser reemplazados por robots, y una mayor eficiencia a largo plazo. El estado del arte del uso de los robots móviles se basa en el hecho de que estamos hablando no sólo de un único robot móvil, sino de una flota de ellos que funciona de forma inteligente y coordinada. Estos dispositivos pueden integrarse en la cadena de suministro para poder transportar cargas útiles sin necesidad de intervención humana. Además, esta integración permite una gran flexibilidad, ya que los robots móviles industriales inteligentes pueden adaptarse a nuevas condiciones, parámetros impuestos y obstáculos que no estaban previstos. Para cualquier robot móvil autónomo, es necesario un conocimiento previo de su entorno antes de realizar una navegación autónoma, es decir, tener un mapa previo. La cartografía suele ser una tarea intervenida por el hombre que lleva tiempo, especialmente en el caso de las grandes instalaciones. Este trabajo propone una forma de mapear autónomamente, de la manera más eficiente, un ambiente interior 2D utilizando el enfoque de Árboles aleatorios de exploración rápida, ya que está sesgado hacia regiones desconocidas. Además, este trabajo propone la discriminación de objetos durante el mapeo. Con el enfoque convencional, durante el proceso de mapeo, los escáneres láser leen la presencia de todos los obstáculos en el entorno. Este hecho es indeseable, ya que algunos de estos obstáculos escaneados son escaneados sólo por causalidad du, [EN] Since the geopolitical world is not polarized anymore, the market competitivity is increasing as never before so in order to survive as an industrial organization, it is key to be competitive. That is, reducing costs and production times among other needs. Mobile robots are resources that manage to get those needs relieved since they can substitute humans and perform better. This causes human issues casuistic drop, human resources re-allocation in more creative job positions which cannot replaced by robots, and more long-term efficiency. The state-of-the-art of the use of mobile robots remains on the fact that we are talking about not just a single mobile robot but a fleet of them which performs in a smart and coordinated way. These devices can be integrated in the supply-chain so that can transport payloads without the need of any human intervention. In addition, such integration allows a huge flexibility since smart industrial mobile robots can adapt to new conditions, imposed parameters and obstacles that were not predicted. For any autonomous mobile robot, a prior knowledge about its environment is necessary before performing autonomous navigation, that is to have a previous map. Mapping usually is a human intervened task which takes time, especially for large facilities. This work proposes a way to map autonomously, in the most efficient way, an indoor 2D environment by using the Rapidly-exploring Random Trees approach since it is biased towards unknown regions. In addition, this work proposes object discrimination during mapping. With the conventional approach, during the mapping process laser scanners read the presence of all the obstacles in the environment. This fact is undesired since some of such scanned obstacles are scanned just by causality during the exploration (e.g. personnel, industrial mobile equipment ). Such undesired registered data in the map suppose noise and does not represent the actual long-term environment. The implementation of remo
- Published
- 2020
18. Bluetongue virus infection induces aberrant mitosis in mammalian cells.
- Author
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Shaw, Andrew E., Brüning-Richardson, Anke, Morrison, Ewan E., Bond, Jacquelyn, Simpson, Jennifer, Ross-Smith, Natalie, Alpar, Oya, Mertens, Peter P. C., and Monaghan, Paul
- Subjects
- *
BLUETONGUE virus , *ARBOVIRUS diseases , *BLUETONGUE , *MITOSIS , *CELL cycle , *CONFOCAL microscopy , *CENTROSOMES , *MAMMALS - Abstract
Background Bluetongue virus (BTV) is an arbovirus that is responsible for 'bluetongue', an economically important disease of livestock. Although BTV is well characterised at the protein level, less is known regarding its interaction with host cells. During studies of virus inclusion body formation we observed what appeared to be a large proportion of cells in mitosis. Although the modulation of the cell cycle is well established for many viruses, this was a novel observation for BTV. We therefore undertook a study to reveal in more depth the impact of BTV upon cell division. Methods We used a confocal microscopy approach to investigate the localisation of BTV proteins in a cellular context with their respective position relative to cellular proteins. In addition, to quantitatively assess the frequency of aberrant mitosis induction by the viral non-structural protein (NS) 2 we utilised live cell imaging to monitor HeLa-mCherry tubulin cells transfected with a plasmid expressing NS2. Results Our data showed that these 'aberrant mitoses' can be induced in multiple cell types and by different strains of BTV. Further study confirmed multiplication of the centrosomes, each resulting in a separate mitotic spindle during mitosis. Interestingly, the BTV NS1 protein was strongly localised to the centrosomal regions. In a separate, yet related observation, the BTV NS2 protein was co-localised with the condensed chromosomes to a region suggestive of the kinetochore. Live cell imaging revealed that expression of an EGFP-NS2 fusion protein in HeLa-mCherry tubulin cells also results in mitotic defects. Conclusions We hypothesise that NS2 is a microtubule cargo protein that may inadvertently disrupt the interaction of microtubule tips with the kinetochores during mitosis. Furthermore, the BTV NS1 protein was distinctly localised to a region encompassing the centrosome and may therefore be, at least in part, responsible for the disruption of the centrosome as observed in BTV infected mammalian cells. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
19. FLOOD RESILIENCE AND SUSTAINABLE DEVELOPMENT IN URBAN NIGERIA: INTEGRATING TRADITIONAL AND NON-STRUCTURAL METHODS OF MITIGATING AND ADAPTING TO FLOODING IN CROSS RIVER STATE, SOUTH-EASTERN NIGERIA (II).
- Author
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INGWE, RICHARD
- Subjects
CLIMATE change ,SUSTAINABLE development ,FLOOD control ,FLOOD insurance ,CLIMATOLOGY ,CRISIS management - Abstract
We examined application of non-structural measures in addition to conventional structural approaches by Government Agency and community for flood management in Cross River State (Nigeria) at: regional-ambit and community levels. We used focus group discussion in depth interview, and observation methods to collect data from primary and secondary sources. Our findings include: emphasis on structural flood control measures by government agencies contrasted to use of rudimentary non-structural approaches by communities. Conceptual frames proposed for managing disasters include: emphasizing future climate change impacts based on multiple scales (temporal, spatial and societal) and emphasizing historical response to disasters without increasing the visibility of climate change. We conclude that community institutions, non-government/civil society organizations should lead public institutions in promoting flood resilience based on integrated non-structural to structural measures and show recent developments regarding civil society coalition committed towards promoting environmental governance in Nigeria. Frequent flooding associated with huge losses of lives and property in the study areas, as in most of urban Nigeria, persuade us to recommend that strategically placed civil society be supported by donor/funding organizations to promote integrated non-structural and traditional-structural measures to achieve urban flood resilience nationwide. [ABSTRACT FROM AUTHOR]
- Published
- 2013
20. Genetic analysis of the matrix and non-structural genes of equine influenza virus (H3N8) from epizootic of 2008–2009 in India
- Author
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Virmani, Nitin, Bera, B.C., Shanumugasundaram, K., Singh, B.K., Gulati, B.R., Singh, R.K., and Vaid, R.K.
- Subjects
- *
EQUINE influenza , *COMMUNICABLE diseases in animals , *PHYLOGENY , *VIRUS isolation , *HOMOLOGY (Biology) , *AMINO acid sequence - Abstract
Abstract: India faced an epizootic of equine influenza in 2008–2009. The isolated viruses were typed as H3N8 and grouped with the clade 2 viruses of Florida sublineage on the basis of haemagglutinin (HA) gene sequence analysis. This report describes the genetic analysis and selection pressure of matrix (M) and non-structural 1 (NS1) genes of the Indian isolates. All isolates shared 98.41% and 99.54% homology with other clade 2 viruses of Asian origin for M1 and M2 amino acid (aa) sequences, respectively. There were 3 and 4 unique aa residue changes respectively in M1 and M2 proteins in all Asian isolates. Phylogenetic analysis revealed clustering of Indian and Chinese isolates in a separate group designated here as Asian clade for M gene. Indian and Chinese isolates shared homology ranging from 98.17% to 99.08% at aa level. The M and NS1 genes were under negative selection pressure with estimated magnitude of pressure (ω) 0.054, 0.581 and 0.30 for M1, M2 and NS1, respectively. [Copyright &y& Elsevier]
- Published
- 2011
- Full Text
- View/download PDF
21. Evidence for a relation between the viral load and genotype and hepatitis C virus-specific T cell responses
- Author
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Hultgren, Catharina, Desombere, Isabelle, Leroux-Roels, Geert, Quiroga, Juan A, Carreno, Vincente, Nilsson, Bo, Weiland, Ola, and Sällberg, Matti
- Subjects
- *
HEPATITIS C virus , *VIRAL genomes , *T cells , *VIRAL load - Abstract
Background/Aims: The reason why patients with hepatitis C virus (HCV) genotype non-1 infection respond better to antiviral therapy than patients with genotype 1 infection is not known. The aim of this study is to explore the relation between the viral genotype, viral load, and the endogenous T cell response.Methods: The viral genotype, the viral load, and the endogenous proliferative T cell response to the non-structural 3 protein (NS3) was analysed using serum and peripheral blood mononuclear cells from 103 patients with chronic HCV infection.Results: Among 71 nontreated patients a T cell response was more common among those infected by genotype 3, as compared to those infected with genotype 1 (P<0.05). Among 32 patients undergoing antiviral therapy, presence of a T cell response was more common in genotype non-1 infected patients than in those infected by genotype 1 (P<0.01). Presence of a T cell response was related to a more rapid viral clearance (P<0,05), a negative HCV RNA test at week 12 (P<0.05), and a shorter viral half-life (P<0.05).Conclusions: The presence of an NS3-specific T cell response is related to the viral genotype and to a more rapid clearance of HCV RNA during antiviral therapy. [Copyright &y& Elsevier]
- Published
- 2004
- Full Text
- View/download PDF
22. The Use of Recycled Polyethylene Terephthalate as a Partial Replacement for Sand on the Mechanical Properties of Structural Concrete
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Black, J.
- Subjects
Structural Concrete ,Polyethylene Terephthalate ,aggregate ,structural ,concrete ,non-structural ,sand - Abstract
Negative environmental impacts caused by the over-extraction of sand have arisen due to the high demand of global concrete production. Subsequently, the need to find an adequate replacement for sand in concrete production is paramount. Additionally, the mismanagement of plastic waste in Southeast Asia has resulted in large quantities being sent to landfill. This could otherwise be used as a viable alternative. Several studies have investigated the effect of Polyethylene Terephthalate (PET) aggregate as a partial replacement for sand on the mechanical, durability and physical properties of concrete. Nevertheless, due to the broad number of variables affecting the properties of concrete, gaps remain in the literature suggesting the necessity for a more comprehensive approach. The aim of this research was therefore to investigate the impact on strength when using Polyethylene Terephthalate (PET) flakes in concrete. The effects of substituting 10 % and 20 % of sand by volume with recycled PET flakes were investigated, with the results compared to reference mix samples. 20 cube samples, of sizes 100 mm3 and 150 mm3, were cast for compressive strength tests; 20 cylinder samples, of sizes 100 ømm x 150 mm and 150 ømm x 300 mm, were manufactured for splitting tensile strength tests; and 9 prism samples, of size 100 mm x 100 mm x 500 mm were cured for flexural strength and modulus of elasticity tests. All 49 samples were tested for dry density. A constant curing age of 28 days and a water-to-cement ratio of 0.5 were applied to this experiment. The size of the PET flakes used in the concrete mixes were between 0 and 10 mm. The results indicated that an initial decrease in the compressive strength and modulus of elasticity for 10% replacement level was seen before an increase in strength for 20% replacement. Contrastingly, an initial increase in flexural strength for 10% replacement was exhibited, before a decrease in strength for 20% replacement. The splitting tensile strength and hardened density showed a growing decrease in values for increasing replacement percentage. The conventional reference concrete mixes underwent brittle failure; whereas ductile behaviour was shown by the mixes containing PET flakes. Accordingly, it was concluded that there is significant potential for the use of up to 20 % replacement of PET in a suitable mix design for structural and non-structural applications.
- Published
- 2020
23. Seismic Hazard Mitigation for Buildings.
- Author
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Foo, Simon and Davenport, Alan
- Abstract
Recent natural hazards have exposed the dire consequence of damage and impact upon the built environment. It appears that one of the biggest challenges to the natural hazard mitigation community is how to improve the performance of older building and infrastructure to enhance their ability to withstand natural hazards. By improving their performance, the risk associated with buildings and infrastructure against natural hazards can be mitigated. Within the context of risk management of buildings against earthquakes, the general practice is to follow a three-step process, namely screening, evaluation and mitigation. Screening constitutes a preliminary evaluation process and sets priority for detailed evaluation. Evaluation compares a built environment with code requirements for new construction and sets priority for mitigation. Mitigation can be achieved by means of retrofit or replacement. Retrofit is intended to improve the performance of built environment as required. Replacement may be the only viable solution when economical, technical and environmental considerations are account for. [ABSTRACT FROM AUTHOR]
- Published
- 2003
- Full Text
- View/download PDF
24. PERCEPTIONS OF VULNERABILITY TO FLOODING, HURRICANES, AND CLIMATE CHANGE ON GRAND ISLE, LOUISIANA’S ONLY INHABITED BARRIER ISLAND
- Author
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Miller, Lauren and Miller, Lauren
- Abstract
This study used in-depth interviews of permanent residents on Grand Isle, Louisiana, a remote barrier island, to better understand their perceptions of structural flood measures, non-structural responses to flooding and hurricanes, and perceptions of vulnerability to flooding, hurricanes, and climate change on a remote barrier island-Grand Isle, Louisiana. Residents' perceptions regarding the various structural measures implemented by the federal, state, and local government appeared mixed. Non-structural responses to flooding risks implemented at the household, community, state, and federal level continue to strengthen resiliency on Grand Isle. According to interviewees, aspects of environmental, rural, and economic vulnerability on Grand Isle impact islanders daily, yet residents continue to fight the environmental adversities as well as the flood management conflicts with government agencies. Findings from this study may be relevant to people and rural coastal communities in other parts of the United States and the world facing climate change-related storms and flooding.
- Published
- 2019
25. Cost/performance evaluation of traditional and low-damage structural & non-structural building configurations
- Author
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Bianchi, Simona, Ciurlanti, Jonathan, and Pampanin, Stefano
- Subjects
performance-based ,repair cost ,damage-control ,downtime ,non-structural - Published
- 2019
26. ESTUDIO Y DESARROLLO DE EXPLORACIÓN ROBÓTICA AUTÓNOMA CON DISCRIMINACIÓN SELECTIVA DE OBJETOS MEDIANTE EL USO DE DETECCIÓN DE OBJETOS DE APRENDIZAJE PROFUNDO
- Author
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Blom-Dahl Casanova, Christen
- Subjects
Percepción de Robots ,Computer Vision ,Pretrained Models ,Machine Vision ,MiR ,3D Localization ,Localización en 3D ,Stereo Camera ,RRT ,Cámara Estéreo ,Robot Operating System ,Sistema Operativo de Robots ,Nube de Puntos ,Modelos Pre-entrenados ,La-ser Scanner ,Deep Learning ,Object Detection ,3D Tracking ,OpenCV ,Robot Perception ,Exploración ,Escáner La-ser ,Rastreo en 3D ,Aprendizaje Profundo ,Mapeo ,Visión por Computadora ,ROS ,Transfer Learning ,Árbol aleatorio de exploración rápida ,Rapidly-exploring Random Tree ,INGENIERIA DE SISTEMAS Y AUTOMATICA ,Intel Re-alSense ,Robot móvil industrial ,Robot exploration ,Máster Universitario en Ingeniería Industrial-Màster Universitari en Enginyeria Industrial ,Mapping ,Detección de Objetos ,Aprendizaje de Transferencia ,Pointcloud ,SLAM ,Visión por Máquina ,No Estructural ,Exploration ,Exploración de robots ,Industrial Mobile Robot ,Non-Structural - Abstract
[ES] Dado que el mundo geopolítico ya no está polarizado, la competitividad del mercado aumenta como nunca antes para sobrevivir como organización industrial, es clave ser competitivo. Es decir, reduciendo costos y tiempos de producción entre otras necesidades. Los robots móviles son recursos que consiguen aliviar esas necesidades ya que pueden sustituir a los humanos y tener un mejor rendimiento. Esto provoca una caída casuística de los problemas humanos, la reasignación de recursos humanos a puestos de trabajo más creativos que no pueden ser reemplazados por robots, y una mayor eficiencia a largo plazo. El estado del arte del uso de los robots móviles se basa en el hecho de que estamos hablando no sólo de un único robot móvil, sino de una flota de ellos que funciona de forma inteligente y coordinada. Estos dispositivos pueden integrarse en la cadena de suministro para poder transportar cargas útiles sin necesidad de intervención humana. Además, esta integración permite una gran flexibilidad, ya que los robots móviles industriales inteligentes pueden adaptarse a nuevas condiciones, parámetros impuestos y obstáculos que no estaban previstos. Para cualquier robot móvil autónomo, es necesario un conocimiento previo de su entorno antes de realizar una navegación autónoma, es decir, tener un mapa previo. La cartografía suele ser una tarea intervenida por el hombre que lleva tiempo, especialmente en el caso de las grandes instalaciones. Este trabajo propone una forma de mapear autónomamente, de la manera más eficiente, un ambiente interior 2D utilizando el enfoque de Árboles aleatorios de exploración rápida, ya que está sesgado hacia regiones desconocidas. Además, este trabajo propone la discriminación de objetos durante el mapeo. Con el enfoque convencional, durante el proceso de mapeo, los escáneres láser leen la presencia de todos los obstáculos en el entorno. Este hecho es indeseable, ya que algunos de estos obstáculos escaneados son escaneados sólo por causalidad durante la exploración (por ejemplo, el personal, los equipos móviles industriales, etc.). Estos datos no deseados registrados en el mapa suponen ruido y no representan el entorno real a largo plazo. La implementación de la eliminación de este tipo de ruido se gestiona mediante la combinación de dos módulos. Por un lado, mediante el uso de herramientas de aprendizaje profundo de última generación para lograr la detección de objetos en tiempo real. Por otro lado, un filtro al escáner láser para que sea ciego ante tales detecciones durante la exploración, por lo que nunca se registran en el mapa. Los resultados muestran un gran potencial de resultados de alta calidad que están intrínsecamente asociados con el módulo detector de objetos. Dado que este módulo es de última generación, la tecnología está en constante desarrollo y mejora no sólo en cuanto a rendimiento, sino también en cuanto a flexibilidad y capacidades. Este trabajo es un nuevo y potencial enfoque de alta fidelidad, además del enfoque convencional, para llevar a cabo la exploración con robots móviles., [EN] Since the geopolitical world is not polarized anymore, the market competitivity is increasing as never before so in order to survive as an industrial organization, it is key to be competitive. That is, reducing costs and production times among other needs. Mobile robots are resources that manage to get those needs relieved since they can substitute humans and perform better. This causes human issues casuistic drop, human resources re-allocation in more creative job positions which cannot replaced by robots, and more long-term efficiency. The state-of-the-art of the use of mobile robots remains on the fact that we are talking about not just a single mobile robot but a fleet of them which performs in a smart and coordinated way. These devices can be integrated in the supply-chain so that can transport payloads without the need of any human intervention. In addition, such integration allows a huge flexibility since smart industrial mobile robots can adapt to new conditions, imposed parameters and obstacles that were not predicted. For any autonomous mobile robot, a prior knowledge about its environment is necessary before performing autonomous navigation, that is to have a previous map. Mapping usually is a human intervened task which takes time, especially for large facilities. This work proposes a way to map autonomously, in the most efficient way, an indoor 2D environment by using the Rapidly-exploring Random Trees approach since it is biased towards unknown regions. In addition, this work proposes object discrimination during mapping. With the conventional approach, during the mapping process laser scanners read the presence of all the obstacles in the environment. This fact is undesired since some of such scanned obstacles are scanned just by causality during the exploration (e.g. personnel, industrial mobile equipment ). Such undesired registered data in the map suppose noise and does not represent the actual long-term environment. The implementation of removing such noise is managed by the combination of two modules. On one hand, by using state-of-the-art deep learning tools in order to achieve real-time object detection. On the other hand, a filter to the laser scanner so that it is blind towards such detections during the exploration, so they are never registered on the map. The results show quite potential high-quality results which are intrinsically associated with the object detector module. Since such module is state-of-the-art, the technology involved is constantly developing and improving not just the performance but also flexibility and capabilities. This work is a potential new high-fidelity approach besides the conventional approach in order to perform mobile robot exploration.
- Published
- 2019
27. Seismic vulnerability of non-structural components: from traditional solutions to innovative low-damage systems
- Author
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Bianchi, Simona, Ciurlanti, Jonathan, and Pampanin, Stefano
- Subjects
performance-based ,fragility curves ,damage-control ,non-structural ,dynamic analysis ,fragility curves, dynamic analysis - Published
- 2019
28. Nucleotide and Predicted Amino Acid Sequences of All Genes Encoded by the 3′ Genomic Portion (9.5 kb) of Respiratory Bovine Coronaviruses and Comparisons Among Respiratory and Enteric Coronaviruses.
- Author
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Chouljenko, Vladimir, Kousoulas, Konstantin, Lin, Xiaoqing, and Storz, Johannes
- Abstract
The 3′-ends of the genomes (9538 bp) of two wild-type respiratory bovine coronavirus (RBCV) isolates LSU and OK were obtained by cDNA sequencing. In addition, the 3′-end of the genome (9545) of the wild-type enteric bovine coronavirus (EBCV) strain LY-138 was assembled from available sequences and by cDNA sequencing of unknown genomic regions. Comparative analyses of RBCV and EBCV nucleotide and deduced amino acid sequences revealed that RBCV-specific nucleotide and amino acid differences were disproportionally concentrated within the S gene and the genomic region between the S and E genes. Comparisons among virulent and avirulent BCV strains revealed that virulence-specific nucleotide and amino acid changes were located within the S and E genes, and the 32 kDa open reading frame. [ABSTRACT FROM AUTHOR]
- Published
- 1998
- Full Text
- View/download PDF
29. Thermal insulated glazing unit
- Author
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Hartmann, John [Seattle, WA]
- Published
- 1991
30. Bluetongue virus infection induces aberrant mitosis in mammalian cells
- Author
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Ewan E. Morrison, Andrew Shaw, Paul Monaghan, Anke Brüning-Richardson, Jennifer Simpson, Natalie Ross-Smith, Oya Alpar, Peter P. C. Mertens, Jacquelyn Bond, and Alpar, Oya
- Subjects
Non-structural ,viruses ,Mitosis ,Bluetongue ,Cell Line ,Viral Proteins ,Cytosol ,Microtubule ,Virology ,Animals ,Microscopy, Confocal ,biology ,Kinetochore ,Research ,Cell cycle ,Molecular biology ,Spindle apparatus ,Virus ,Tubulin ,Infectious Diseases ,Interaction with host ,Centrosome ,Host-Pathogen Interactions ,biology.protein ,Non-Structural ,Bluetongue virus - Abstract
Bruning-Richardson, Anke/0000-0002-9862-9805; Mertens, Peter/0000-0002-3438-3738 WOS:000327877200004 PubMed: 24165208 Background: Bluetongue virus (BTV) is an arbovirus that is responsible for 'bluetongue', an economically important disease of livestock. Although BTV is well characterised at the protein level, less is known regarding its interaction with host cells. During studies of virus inclusion body formation we observed what appeared to be a large proportion of cells in mitosis. Although the modulation of the cell cycle is well established for many viruses, this was a novel observation for BTV. We therefore undertook a study to reveal in more depth the impact of BTV upon cell division. Methods: We used a confocal microscopy approach to investigate the localisation of BTV proteins in a cellular context with their respective position relative to cellular proteins. In addition, to quantitatively assess the frequency of aberrant mitosis induction by the viral non-structural protein (NS) 2 we utilised live cell imaging to monitor HeLa-mCherry tubulin cells transfected with a plasmid expressing NS2. Results: Our data showed that these 'aberrant mitoses' can be induced in multiple cell types and by different strains of BTV. Further study confirmed multiplication of the centrosomes, each resulting in a separate mitotic spindle during mitosis. Interestingly, the BTV NS1 protein was strongly localised to the centrosomal regions. In a separate, yet related observation, the BTV NS2 protein was co-localised with the condensed chromosomes to a region suggestive of the kinetochore. Live cell imaging revealed that expression of an EGFP-NS2 fusion protein in HeLa-mCherry tubulin cells also results in mitotic defects. Conclusions: We hypothesise that NS2 is a microtubule cargo protein that may inadvertently disrupt the interaction of microtubule tips with the kinetochores during mitosis. Furthermore, the BTV NS1 protein was distinctly localised to a region encompassing the centrosome and may therefore be, at least in part, responsible for the disruption of the centrosome as observed in BTV infected mammalian cells. BBSRC and DefraUK Research & Innovation (UKRI)Biotechnology and Biological Sciences Research Council (BBSRC); Biotechnology and Biological Sciences Research CouncilUK Research & Innovation (UKRI)Biotechnology and Biological Sciences Research Council (BBSRC) [BBS/E/I/00001720] Funding Source: researchfish The authors are grateful for the funding provided by the BBSRC and Defra.
- Published
- 2013
31. KENAF FOR BIOCOMPOSITE: AN OVERVIEW
- Author
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Kamal, Izran Bin and Kamal, Izran Bin
- Abstract
Increase of the awareness on the importance of protecting the environment has urged researchers around the globe to find ways to produce goods that can minimize harm to the environment. Biocomposite is a product that has been shown to be helpful in achieving this objective. Biocomposite is produced using natural or semi-natural materials, therefore it can easily be disposed, thus, minimize harm to the environment. Kenaf is a natural plant which has began to gain attention as a material in the production of biocomposite. Kenaf is selected as an additional alternative material for producing biocomposite because of its fast-growing properties which makes it capable to deliver a large volume of raw material in a short period of time. This paper reviews the use of kenaf as a material for biocomposite which is used for construction and non-construction purposes. Input from a variety of researches related to kenaf biocomposite as well as its uses are used for this review. It is hoped that this review will attract more people to use kenaf biocomposite, as well as encourage people to respond to the government’s call on green technology in order to preserve the environment.
- Published
- 2014
32. Type-specific identification of influenza viruses A, B and C by the polymerase chain reaction
- Author
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R. van Beek, N. Masurela, M. J. W. Sprenger, E.C.J. Claas, W.G.V. Quint, and G.E.M. Kletera
- Subjects
Non-structural ,Molecular Sequence Data ,Orthomyxoviridae ,Biology ,Polymerase Chain Reaction ,Sensitivity and Specificity ,Article ,Virus ,Microbiology ,law.invention ,law ,Virology ,Clinical specimen ,Diagnosis ,Humans ,Polymerase chain reaction ,Base Sequence ,Oligonucleotide ,Influenzavirus C ,Hybridization probe ,Influenzavirus B ,virus diseases ,biology.organism_classification ,Influenza ,PCR ,Evaluation Studies as Topic ,DNA, Viral ,RNA, Viral ,Primer (molecular biology) ,DNA Probes - Abstract
The aim of this study was to develop a polymerase chain reaction for specific detection of influenza A, B, and C RNA genomes. Three primer sets were selected from conserved regions of the genome coding for the non-structural proteins and were tested on 61 influenza A (22 H1N1, 9 H2N2, and 30 H3N2), 11 influenza B, and three influenza C isolates. Specific amplified products were obtained with all these strains after electrophoresis on a 2% agarose gel. The specificity of the reaction was increased by hybridization with oligonucleotide probes. When nucleic acids from a variety of micro-organisms from the respiratory tract were subjected to the PCR with these primers, no specific amplified products were generated. The sensitivity of the technique was found to be at the subpicogram level. The RNA-PCR was applied to 21 clinical specimens from patients with a culture/IF proven influenza infection. Six influenza A positive patients and 13 influenza B positive patients could be confirmed in the RNA-PCR. In two cases, influenza B positive IF specimens were found negative by the PCR. No virus could be isolated on eggs or tissue culture from these samples. RNA-PCR is a specific and sensitive technique for the detection of influenza virus genomes.
- Published
- 1992
- Full Text
- View/download PDF
33. Crystal structure and activity of Kunjin virus NS3 helicase; Protease and helicase domain assembly in the full length NS3 protein
- Author
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Mario Milani, V. Pandini, Dmitri I. Svergun, Bruno Coutard, Barbara Selisko, Eloise Mastrangelo, Alexander A. Khromykh, Martino Bolognesi, Peter V. Konarev, Graziella Sorrentino, Frederic Peyrane, Michela Bollati, Xavier de Lamballerie, and Bruno Canard
- Subjects
Models, Molecular ,viruses ,Molecular Sequence Data ,HEPATITIS-C VIRUS ,WEST-NILE-VIRUS ,Nucleic acid secondary structure ,Protein structure ,X-Ray Diffraction ,Structural Biology ,Kunjin virus ,Settore BIO/10 - Biochimica ,Scattering, Small Angle ,RNA triphosphatase ,Amino Acid Sequence ,Protein Structure, Quaternary ,Molecular Biology ,DENGUE-VIRUS ,Adenosine Triphosphatases ,NS3 ,biology ,DNA Helicases ,DNA HELICASE ,RNA ,Helicase ,virus diseases ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Molecular biology ,RNA Helicase A ,KUNV ,WNV ,West Nile virus ,YFV ,yellow fever virus ,DENV ,Dengue virus ,HCV ,hepatitis C virus ,RTPase ,5′-terminal RNA triphosphatase activity ,ss ,single-stranded ,ds ,double-stranded ,NS3FL ,full length KUNV NS3 protein ,SAXS ,small angle X-ray scattering ,NS ,non-structural ,NTR ,non-translated region ,DLS ,dynamic light scattering ,viral helicase ,helicase structure ,flavivirus NS3 protein ,Cell biology ,Protein Structure, Tertiary ,biology.protein ,RNA HELICASE ,Peptide Hydrolases - Abstract
Flaviviral NS3 is a multifunctional protein displaying N-terminal protease activity in addition to C-terminal helicase, nucleoside 5'-triphosphatase (NTPase), and 5'-terminal RNA triphosphatase (RTPase) activities. NS3 is held to support the separation of RNA daughter and template strands during viral replication. In addition, NS3 assists the initiation of replication by unwinding the RNA secondary structure in the 3' non-translated region (NTR). We report here the three-dimensional structure (at 3.1 angstrom resolution) of the NS3 helicase domain (residues 186-619; NS3:186-619) from Kunjin virus, an Australian variant of the West Nile virus. As for homologous helicases, NS3:186-619 is composed of three domains, two of which are structurally related and held to host the NTPase and RTPase active sites. The third domain (C-terminal) is involved in RNA binding/ recognition. The NS3:186-619 construct occurs as a dimer in solution and in the crystals. We show that NS3:186-619 displays both ATPase and RTPase activities, that it can unwind a double-stranded RNA substrate, being however inactive on a double-stranded DNA substrate. Analysis of different constructs shows that full length NS3 displays increased helicase activity, suggesting that the protease domain plays an assisting role in the RNA unwinding process. The structural interaction between the helicase and protease domain has been assessed using small angle X-ray scattering on full length NS3, disclosing that the protease and helicase domains build a rather elongated molecular assembly differing from that observed in the NS3 protein from hepatitis C virus. (C) 2007 Elsevier Ltd. All rights reserved.
- Published
- 2007
- Full Text
- View/download PDF
34. Changes in immune cell populations in the periphery and liver of GBV-B-infected and convalescent tamarins (Saguinus labiatus).
- Author
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Hood SP, Mee ET, Perkins H, Bowen O, Dale JM, Almond NM, Karayiannis P, Bright H, Berry NJ, and Rose NJ
- Subjects
- Animals, Flaviviridae Infections immunology, GB virus B immunology, Hepatitis, Viral, Human immunology, Humans, Liver virology, Lymphocyte Activation, T-Lymphocytes immunology, Viremia immunology, Viremia virology, Virus Replication, Disease Models, Animal, Flaviviridae Infections virology, GB virus B physiology, Hepatitis, Viral, Human virology, Liver immunology, Saguinus immunology, Saguinus virology
- Abstract
Flaviviruses related to hepatitis C virus (HCV) in suitable animal models may provide further insight into the role that cellular immunity contributes to spontaneous clearance of HCV. We characterised changes in lymphocyte populations in tamarins with an acute GBV-B infection, a hepatitis virus of the flaviviridae. Major immune cell populations were monitored in peripheral and intra-hepatic lymphocytes at high viraemia or following a period when peripheral virus was no longer detected. Limited changes in major lymphocyte populations were apparent during high viraemia; however, the proportions of CD3(+) lymphocytes decreased and CD20(+) lymphocytes increased once peripheral viraemia became undetectable. Intrahepatic lymphocyte populations increased at both time points post-infection. Distinct expression patterns of PD-1, a marker of T-cell activation, were observed on peripheral and hepatic lymphocytes; notably there was elevated PD-1 expression on hepatic CD4(+) T-cells during high viraemia, suggesting an activated phenotype, which decreased following clearance of peripheral viraemia. At times when peripheral vRNA was not detected, suggesting viral clearance, we were able to readily detect GBV-B RNA in the liver, indicative of long-term virus replication. This study is the first description of changes in lymphocyte populations during GBV-B infection of tamarins and provides a foundation for more detailed investigations of the responses that contribute to the control of GBV-B infection., (Crown Copyright © 2013. Published by Elsevier B.V. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
35. The stability of secreted, acid-labile H77/JFH-1 hepatitis C virus (HCV) particles is altered by patient isolate genotype 1a p7 sequences.
- Author
-
Atkins E, Tatineni R, Li H, Gretch D, Harris M, and Griffin S
- Subjects
- Amino Acid Sequence, Cell Line, Genotype, Hepacivirus isolation & purification, Hepacivirus physiology, Humans, Molecular Sequence Data, Sequence Alignment, Viral Proteins metabolism, Virion drug effects, Virion genetics, Virion isolation & purification, Virion physiology, Acids pharmacology, Hepacivirus drug effects, Hepacivirus genetics, Hepatitis C virology, Viral Proteins genetics, Virus Release drug effects
- Abstract
Secreted infectious particles generated by the genotype 2a JFH-1 hepatitis C virus infectious clone are resistant to acidic pH, whereas intracellular virions remain acid-labile. Thus, JFH-1 particles are thought to undergo pH maturation as they are secreted from the cell. Here, we demonstrate that both infectious intracellular and secreted genotype 1a (H77)/JFH-1 chimaeric particles display enhanced acid sensitivity compared with JFH-1, although pH maturation still occurs upon release. Introduction of p7 sequences from genotype 1a infected HCV patients into the H77/JFH-1 background yielded variable effects on infectious particle production and sensitivity to small molecule inhibitors. However, two selected patient p7 sequences increased the acid stability of secreted, but not intracellular H77/JFH-1 particles, suggesting that p7 directly influences particle pH maturation via an as yet undefined mechanism. We propose that HCV particles vary in acid stability, and that this may be dictated by variations in both canonical structural proteins and p7., (© 2013 Elsevier Inc. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
36. In vitro efficacy of approved and experimental antivirals against novel genotype 3 hepatitis C virus subgenomic replicons.
- Author
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Yu M, Corsa AC, Xu S, Peng B, Gong R, Lee YJ, Chan K, Mo H, Delaney W 4th, and Cheng G
- Subjects
- Cell Line, Genes, Reporter, Genotype, Hepacivirus classification, Hepacivirus genetics, Hepatocytes virology, Humans, Luciferases analysis, Luciferases genetics, Microbial Sensitivity Tests methods, Antiviral Agents pharmacology, Hepacivirus drug effects, Replicon drug effects, Virus Replication drug effects
- Abstract
Infection with genotype 3 hepatitis C virus (HCV) is common throughout the world, however no direct-acting antiviral (DAA) has been approved to treat this genotype. We therefore attempted to develop novel genotype 3 replicons to facilitate the discovery and development of new HCV therapies. A novel Huh-7-derived cell line 1C but not Lunet cells enabled the selection of a few stable colonies of a genotype 3a subgenomic replicon (strain S52). Genotypic analysis revealed a mutation of P89L in the viral NS3 protease domain, which was confirmed to enhance genotype 3a RNA replication and enable the establishment of highly replicating luciferase-encoding replicons. Secondary adaptive mutations that further enhanced RNA replication were identified in the viral NS3 and NS4A proteins. In addition, cell lines that were cured of genotype 3a replicons demonstrated higher permissiveness specifically to genotype 3a HCV replication. These novel replicons and cell lines were then used to study the activity of approved and experimental HCV inhibitors. NS3 protease and non-nucleoside NS5B polymerase inhibitors often demonstrated substantially less antiviral activity against genotype 3a compared to genotype 1b. In contrast, nucleoside analog NS5B inhibitors and host-targeting HCV inhibitors showed comparable antiviral activity between genotypes 3a and 1b. Overall, the establishment of this novel genotype 3a replicon system, in conjunction with those derived from other genotypes, will aid the development of treatment regimens for all genotypes of HCV., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
37. Development of specific dengue virus 2'-O- and N7-methyltransferase assays for antiviral drug screening.
- Author
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Barral K, Sallamand C, Petzold C, Coutard B, Collet A, Thillier Y, Zimmermann J, Vasseur JJ, Canard B, Rohayem J, Debart F, and Decroly E
- Subjects
- Antiviral Agents pharmacology, Dengue drug therapy, Dengue Virus drug effects, Dengue Virus genetics, Dengue Virus metabolism, Enzyme Inhibitors pharmacology, Humans, Methyltransferases antagonists & inhibitors, Methyltransferases genetics, Methyltransferases metabolism, RNA Caps genetics, RNA Caps metabolism, RNA, Messenger genetics, RNA, Messenger metabolism, RNA, Viral genetics, RNA, Viral metabolism, Viral Nonstructural Proteins antagonists & inhibitors, Viral Nonstructural Proteins genetics, Viral Nonstructural Proteins metabolism, Dengue virology, Dengue Virus enzymology, Drug Evaluation, Preclinical methods, Enzyme Assays methods, Methyltransferases analysis, Viral Nonstructural Proteins analysis
- Abstract
Dengue virus (DENV) protein NS5 carries two mRNA cap methyltransferase (MTase) activities involved in the synthesis of a cap structure, (7Me)GpppA(2'OMe)-RNA, at the 5'-end of the viral mRNA. The methylation of the cap guanine at its N7-position (N7-MTase, (7Me)GpppA-RNA) is essential for viral replication. The development of high throughput methods to identify specific inhibitors of N7-MTase is hampered by technical limitations in the large scale synthesis of long capped RNAs. In this work, we describe an efficient method to generate such capped RNA, GpppA(2'OMe)-RNA₇₄, by ligation of two RNA fragments. Then, we use GpppA(2'OMe)-RNA₇₄ as a substrate to assess DENV N7-MTase activity and to develop a robust and specific activity assay. We applied the same ligation procedure to generate (7Me)GpppA-RNA₇₄ in order to characterize the DENV 2'-O-MTase activity specifically on long capped RNA. We next compared the N7- and 2'-O-MTase inhibition effect of 18 molecules, previously proposed to affect MTase activities. These experiments allow the validation of a rapid and sensitive method easily adaptable for high-throughput inhibitor screening in anti-flaviviral drug development., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
38. Non-urethane plastic foams. II - Notes on structural and non-structural uses based on information available from 1st December 1964 to 31st May 1965.
- Author
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Harrison S.R. and Harrison S.R.
- Published
- 1965
39. Non-urethane plastic foams. Notes on structural and non-structural uses based on information available up to 1st December 1964.
- Author
-
Harrison S.R. and Harrison S.R.
- Published
- 1964
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