418 results on '"Nomenclature Committee"'
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2. ERS International Congress 2022: highlights from the Basic and Translational Science Assembly
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Sara Cuevas Ocaña, Natalia El-Merhie, Merian E. Kuipers, Mareike Lehmann, Sara Rolandsson Enes, Carola Voss, Lareb S.N. Dean, Matthew Loxham, Agnes W. Boots, Suzanne M. Cloonan, Catherine M. Greene, Irene H. Heijink, Audrey Joannes, Arnaud A. Mailleux, Nahal Mansouri, Niki L. Reynaert, Anne M. van der Does, Darcy E. Wagner, Niki Ubags, University of Nottingham, UK (UON), Justus-Liebig-Universität Gießen = Justus Liebig University (JLU), Leiden University Medical Center (LUMC), Universiteit Leiden, Philipps Universität Marburg = Philipps University of Marburg, Helmholtz Munich, Deutsches Forschungszentrum für Gesundheit und Umwelt (GmbH), Lund University [Lund], University of Southampton, Maastricht University [Maastricht, Pays-Bas], Trinity College Dublin, Royal College of Surgeons in Ireland (RCSI), University of Groningen [Groningen], Institut de recherche en santé, environnement et travail (Irset), Université d'Angers (UA)-Université de Rennes (UR)-École des Hautes Études en Santé Publique [EHESP] (EHESP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Structure Fédérative de Recherche en Biologie et Santé de Rennes ( Biosit : Biologie - Santé - Innovation Technologique ), École des Hautes Études en Santé Publique [EHESP] (EHESP), Centre Hospitalier Universitaire Vaudois [Lausanne] (CHUV), Ecole Polytechnique Fédérale de Lausanne (EPFL), School of Nutrition and Translational Research in Metabolism [Maastricht] (NUTRIM), and Maastricht University [Maastricht]
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Pulmonary and Respiratory Medicine ,CELL-DEATH ,MOLECULAR-MECHANISMS ,[SDV]Life Sciences [q-bio] ,NOMENCLATURE COMMITTEE ,AIR-POLLUTION ,BRONCHOPULMONARY DYSPLASIA ,MATERNAL VASCULAR UNDERPERFUSION ,COMPREHENSIVE ANALYSIS ,LUNG ,DISEASE ,RECOMMENDATIONS - Abstract
International audience; In this review, the Basic and Translational Science Assembly of the European Respiratory Society provides an overview of the 2022 International Congress highlights. We discuss the consequences of respiratory events from birth until old age regarding climate change related alterations in air quality due to pollution caused by increased ozone, pollen, wildfires and fuel combustion as well as the increasing presence of microplastic and microfibres. Early life events such as the effect of hyperoxia in the context of bronchopulmonary dysplasia and crucial effects of the intrauterine environment in the context of pre-eclampsia were discussed. The Human Lung Cell Atlas (HLCA) was put forward as a new point of reference for healthy human lungs. The combination of single-cell RNA sequencing and spatial data in the HLCA has enabled the discovery of new cell types/states and niches, and served as a platform that facilitates further investigation of mechanistic perturbations. The role of cell death modalities in regulating the onset and progression of chronic lung diseases and its potential as a therapeutic target was also discussed. Translational studies identified novel therapeutic targets and immunoregulatory mechanisms in asthma. Lastly, it was highlighted that the choice of regenerative therapy depends on disease severity, ranging from transplantation to cell therapies and regenerative pharmacology.
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- 2023
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3. The IMGT/HLA Database
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Robinson, James, Marsh, Steven G. E., Flower, Darren D.R., editor, Davies, Matthew, editor, and Ranganathan, Shoba, editor
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- 2010
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4. The Immuno Polymorphism Database
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Robinson, James, Marsh, Steven G. E., Flower, Darren D.R., editor, Davies, Matthew, editor, and Ranganathan, Shoba, editor
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- 2010
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5. Naming HLA diversity: A review of HLA nomenclature
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Carolyn Katovich Hurley
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0301 basic medicine ,Genotype ,Reference site ,media_common.quotation_subject ,Immunology ,Human leukocyte antigen ,Computational biology ,Biology ,Epitopes ,03 medical and health sciences ,0302 clinical medicine ,HLA Antigens ,Terminology as Topic ,Humans ,Immunology and Allergy ,Serologic Tests ,Nomenclature ,Alleles ,media_common ,Polymorphism, Genetic ,Nomenclature Committee ,Histocompatibility Testing ,Genetic Variation ,General Medicine ,030104 developmental biology ,030215 immunology ,Diversity (politics) - Abstract
The development of a standardized HLA nomenclature has been critical in our understanding of the HLA system and in facilitating the clinical applications of HLA. The Nomenclature Committee for Factors of the HLA System, established in 1968, has overseen the development and usage of nomenclature based on serologic specificities, cellular responses, and DNA sequences. Their decisions have been guided by community consensus reached through 17 international workshops beginning in 1964 and continuing today. Two websites provide a curated database of the sequences of over 26,000 HLA alleles and a reference site for the current nomenclature. This review covers the major steps in the development of the HLA nomenclature as well as the efforts of other groups to extend its usefulness for research and clinical applications.
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- 2021
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6. Report of the Nomenclature Committee for Fossils: 14
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Patrick S. Herendeen
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History ,Nomenclature Committee ,Library science ,Plant Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2021
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7. Report of the Nomenclature Committee for Vascular Plants: 71
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Wendy L. Applequist
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Nomenclature Committee ,Library science ,Plant Science ,Biology ,Ecology, Evolution, Behavior and Systematics - Published
- 2020
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8. Report of the Nomenclature Committee for Fossils: 13
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Patrick S. Herendeen
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Geography ,Nomenclature Committee ,Library science ,Plant Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2020
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9. Consensus Rules for Molecular Sequences: Open Problems
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Bock, H. H., Day, W. H. E., McMorris, F. R., Bock, H. H., editor, Opitz, O., editor, Schader, M., editor, Bock, Hans-Hermann, editor, and Polasek, Wolfgang, editor
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- 1996
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10. Comments on Gene Symbols and Terminology
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Daiger, Stephen P., Hollyfield, Joe G., editor, Anderson, Robert E., editor, and LaVail, Matthew M., editor
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- 1993
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11. The Nomenclature of Monoclonal Antibodies
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Blaine, L. and Loening, Kurt L., editor
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- 1990
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12. Enzyme Nomenclature
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Webb, Edwin C. and Loening, Kurt L., editor
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- 1990
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13. Activities of the IUPAC/IUB Joint Commission on Biochemical Nomenclature (JCBN) and the Nomenclature Committee of IUB (NC-IUB)
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Loening, Kurt L. and Loening, Kurt L., editor
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- 1990
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14. Terminological Activities in Immunology
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Tada, T., Matsuoka, S., and Loening, Kurt L., editor
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- 1990
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15. United States Adopted Names for Drugs
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Schiffman, Donald O. and Loening, Kurt L., editor
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- 1990
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16. Report of the Nomenclature Committee for Algae: 22
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Robert A. Andersen
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Geography ,Algae ,biology ,Nomenclature Committee ,Library science ,Plant Science ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Published
- 2020
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17. Report of the Nomenclature Committee for Vascular Plants: 70
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Wendy L. Applequist
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Geography ,Nomenclature Committee ,Library science ,Plant Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2019
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18. Report of the Nomenclature Committee for Algae: 23
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Robert A. Andersen
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Geography ,Algae ,biology ,Nomenclature Committee ,Library science ,Plant Science ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Published
- 2021
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19. Cell Death in Cyanobacteria: Current Understanding and Recommendations for a Consensus on Its Nomenclature
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Anabella Aguilera, Marina Klemenčič, Daniela J. Sueldo, Piotr Rzymski, Leda Giannuzzi, and María Victoria Martin
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Microbiology (medical) ,Cyanobacteria ,ferroptosis-like ,Programmed cell death ,Biología ,lcsh:QR1-502 ,Review ,cyanobacterial blooms ,Microbiology ,lcsh:Microbiology ,Regulated cell death ,Cyanophages ,Nomenclature ,Ciencias Exactas ,reactive oxygen species ,biology ,Nomenclature Committee ,regulated cell death ,Cellular death ,cyanophages ,biology.organism_classification ,apoptosis-like ,Mikrobiologi ,caspases ,Evolutionary biology - Abstract
Cyanobacteria are globally widespread photosynthetic prokaryotes and are major contributors to global biogeochemical cycles. One of the most critical processes determining cyanobacterial eco-physiology is cellular death. Evidence supports the existence of controlled cellular demise in cyanobacteria, and various forms of cell death have been described as a response to biotic and abiotic stresses. However, cell death research in this phylogenetic group is a relatively young field and understanding of the underlying mechanisms and molecular machinery underpinning this fundamental process remains largely elusive. Furthermore, no systematic classification of modes of cell death has yet been established for cyanobacteria. In this work, we analyzed the state of knowledge in the field of cyanobacterial cell death. Based on that, we propose unified criterion for the definition of accidental, regulated, and programmed forms of cell death in cyanobacteria based on molecular, biochemical, and morphologic aspects following the directions of the Nomenclature Committee on Cell Death (NCCD). With this, we aim to provide a guide to standardize the nomenclature related to this topic in a precise and consistent manner, which will facilitate further ecological, evolutionary, and applied research in the field of cyanobacterial cell death., Facultad de Ciencias Exactas, Centro de Investigación y Desarrollo en Criotecnología de Alimentos
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- 2021
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20. Proteins as Enzymes
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Sajad A. Rather, Jahangir A. Rather, Rehana Akhter, Tariq Ahmad Ganaie, Farooq Ahmad Masoodi, and Sajad Mohd Wani
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chemistry.chemical_classification ,Enzyme ,Molecular level ,chemistry ,Nomenclature Committee ,Substrate (chemistry) ,Biochemical reactions ,Computational biology ,Function (biology) - Abstract
A fundamental principle of proteins is to act as enzymes-biocatalysts working as highly efficient machines at the molecular level by accelerating the conversion of substrates into products. Although RNAs are also capable of catalyzing some biochemical reactions, but most are catalyzed by proteins. A variety of experimental and computational techniques continue to reveal that proteins are dynamically active machines. Due to the growing complexity and inconsistency in the naming of enzymes, the nomenclature committee of the International Union of Biochemistry and Molecular Biology (IUBMB) has assigned an EC number a four level hierarchical description to enzyme proteins. In the past, enzymes function has been explained on the basis of direct structural interactions between the enzyme and the substrate. The structural characterization of enzymes can be elucidating by various techniques such as spectroscopic methods, x-ray crystallography and more recently, multidimensional NMR methods. This chapter covers the basic principles of enzymes such as proteinaceous nature and substrate binding, classification, and structural characterization.
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- 2021
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21. Amyloid nomenclature 2020: update and recommendations by the International Society of Amyloidosis (ISA) nomenclature committee
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Jean D. Sipe, Yoshiki Sekijima, David Eisenberg, Merrill D. Benson, Per Westermark, Giampaolo Merlini, Maria João Saraiva, and Joel N. Buxbaum
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Amyloid ,2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,Pneumonia, Viral ,Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy) ,Gene Expression ,Amyloidogenic Proteins ,Computational biology ,oligomer ,Education, Distance ,Extracellular matrix protein 1 ,Terminology as Topic ,mental disorders ,Internal Medicine ,Humans ,Medicine ,education ,fibril protein ,Medicinsk bioteknologi (med inriktning mot cellbiologi (inklusive stamcellsbiologi), molekylärbiologi, mikrobiologi, biokemi eller biofarmaci) ,Pandemics ,Nomenclature ,education.field_of_study ,Nomenclature Committee ,business.industry ,Amyloidosis ,Biochemistry and Molecular Biology ,COVID-19 ,Congresses as Topic ,Amyloid fibril ,medicine.disease ,aggegation ,inclusion ,nomenclature ,Coronavirus Infections ,business ,Biokemi och molekylärbiologi - Abstract
The ISA Nomenclature Committee met electronically before and directly after the XVII ISA International Symposium on Amyloidosis, which, unfortunately, had to be virtual in September 2020 due to the ongoing COVID-19 pandemic instead of a planned meeting in Tarragona in March. In addition to confirmation of basic nomenclature, several additional concepts were discussed, which are used in scientific amyloid literature. Among such concepts are cytotoxic oligomers, protofibrils, primary and secondary nucleation, seeding and cross-seeding, amyloid signature proteins, and amyloid plaques. Recommendations for their use are given. Definitions of amyloid and amyloidosis are confirmed. Possible novel human amyloid fibril proteins, appearing as 'classical' in vivo amyloid, were discussed. It was decided to include fibulin-like extracellular matrix protein 1 (amyloid protein: AEFEMP1), which appears as localised amyloid in portal veins. There are several possible amyloid proteins under investigation, and these are included in a new Table.
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- 2020
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22. Genenames.org: the HGNC and VGNC resources in 2021
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Ruth L. Seal, Tamsin E. M. Jones, Elspeth A. Bruford, Bryony Braschi, Susan Tweedie, Bethan Yates, and Kristian Gray
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AcademicSubjects/SCI00010 ,HUGO Gene Nomenclature Committee ,Computational biology ,Biology ,03 medical and health sciences ,User-Computer Interface ,0302 clinical medicine ,Species Specificity ,Terminology as Topic ,Databases, Genetic ,Genetics ,Animals ,Humans ,Database Issue ,Nomenclature ,030304 developmental biology ,Core set ,0303 health sciences ,Internet ,Nomenclature Committee ,Computational Biology ,Proteins ,Genomics ,Gene nomenclature ,Genes ,Symbol (programming) ,Vertebrates ,Human genome ,030217 neurology & neurosurgery - Abstract
The HUGO Gene Nomenclature Committee (HGNC) based at EMBL’s European Bioinformatics Institute (EMBL-EBI) assigns unique symbols and names to human genes. There are over 42,000 approved gene symbols in our current database of which over 19 000 are for protein-coding genes. While we still update placeholder and problematic symbols, we are working towards stabilizing symbols where possible; over 2000 symbols for disease associated genes are now marked as stable in our symbol reports. All of our data is available at the HGNC website https://www.genenames.org. The Vertebrate Gene Nomenclature Committee (VGNC) was established to assign standardized nomenclature in line with human for vertebrate species lacking their own nomenclature committee. In addition to the previous VGNC core species of chimpanzee, cow, horse and dog, we now name genes in cat, macaque and pig. Gene groups have been added to VGNC and currently include two complex families: olfactory receptors (ORs) and cytochrome P450s (CYPs). In collaboration with specialists we have also named CYPs in species beyond our core set. All VGNC data is available at https://vertebrate.genenames.org/. This article provides an overview of our online data and resources, focusing on updates over the last two years.
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- 2020
23. Necroptosis in Cholangiocarcinoma
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CELL-DEATH RECOMMENDATIONS ,PROGRAMMED NECROSIS ,EXPRESSION ,MOLECULAR-MECHANISMS ,regulated cell death ,necroptosis ,cell death ,CANCER DRUG-RESISTANCE ,NOMENCLATURE COMMITTEE ,HEPATIC ISCHEMIA ,LIVER-INJURY ,cholangiocarcinoma ,PROTEIN-KINASE 3 ,DOMAIN-LIKE PROTEIN - Abstract
Necroptosis is a type of regulated cell death that is increasingly being recognized as a relevant pathway in different pathological conditions. Necroptosis can occur in response to multiple stimuli, is triggered by the activation of death receptors, and is regulated by receptor-interacting protein kinases 1 and 3 and mixed-lineage kinase domain-like, which form a regulatory complex called the necrosome. Accumulating evidence suggests that necroptosis plays a complex role in cancer, which is likely context-dependent and can vary among different types of neoplasms. Necroptosis serves as an alternative mode of programmed cell death overcoming apoptosis and, as a pro-inflammatory death type, it may inhibit tumor progression by releasing damage-associated molecular patterns to elicit robust cross-priming of anti-tumor CD8+ T cells. The development of therapeutic strategies triggering necroptosis shows great potential for anti-cancer therapy. In this review, we summarize the current knowledge on necroptosis and its role in liver biliary neoplasms, underlying the potential of targeting necroptosis components for cancer treatment.
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- 2020
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24. Necroptosis in Cholangiocarcinoma
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Iris E M de Jong, Massimiliano Cadamuro, Luca Fabris, Maria Guido, and Samantha Sarcognato
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0301 basic medicine ,EXPRESSION ,cell death ,cholangiocarcinoma ,necroptosis ,regulated cell death ,Programmed cell death ,Necroptosis ,Review ,Biology ,Models, Biological ,Cholangiocarcinoma ,03 medical and health sciences ,0302 clinical medicine ,Regulated cell death ,medicine ,Animals ,Humans ,HEPATIC ISCHEMIA ,lcsh:QH301-705.5 ,CELL-DEATH RECOMMENDATIONS ,PROGRAMMED NECROSIS ,Kinase ,MOLECULAR-MECHANISMS ,Liver Diseases ,Cancer ,General Medicine ,medicine.disease ,030104 developmental biology ,lcsh:Biology (General) ,Apoptosis ,Tumor progression ,030220 oncology & carcinogenesis ,Cancer research ,CANCER DRUG-RESISTANCE ,NOMENCLATURE COMMITTEE ,LIVER-INJURY ,CD8 ,PROTEIN-KINASE 3 ,DOMAIN-LIKE PROTEIN - Abstract
Necroptosis is a type of regulated cell death that is increasingly being recognized as a relevant pathway in different pathological conditions. Necroptosis can occur in response to multiple stimuli, is triggered by the activation of death receptors, and is regulated by receptor-interacting protein kinases 1 and 3 and mixed-lineage kinase domain-like, which form a regulatory complex called the necrosome. Accumulating evidence suggests that necroptosis plays a complex role in cancer, which is likely context-dependent and can vary among different types of neoplasms. Necroptosis serves as an alternative mode of programmed cell death overcoming apoptosis and, as a pro-inflammatory death type, it may inhibit tumor progression by releasing damage-associated molecular patterns to elicit robust cross-priming of anti-tumor CD8+ T cells. The development of therapeutic strategies triggering necroptosis shows great potential for anti-cancer therapy. In this review, we summarize the current knowledge on necroptosis and its role in liver biliary neoplasms, underlying the potential of targeting necroptosis components for cancer treatment.
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- 2020
25. Amyloid nomenclature 2018: recommendations by the International Society of Amyloidosis (ISA) nomenclature committee
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Giampaolo Merlini, Maria João Saraiva, Yoshiki Sekijima, Joel N. Buxbaum, Jean D. Sipe, David Eisenberg, Per Westermark, and Merrill D. Benson
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Societies, Scientific ,Amyloid ,Pathology ,medicine.medical_specialty ,Cell- och molekylärbiologi ,030204 cardiovascular system & hematology ,Heparan Sulfate Proteoglycans ,03 medical and health sciences ,0302 clinical medicine ,Terminology as Topic ,Internal Medicine ,medicine ,Humans ,Nomenclature ,amyloidosis ,Clinical Laboratory Medicine ,Nomenclature Committee ,business.industry ,Amyloidosis ,aggregation ,International Agencies ,misfolding ,Amyloid fibril ,medicine.disease ,Systemic amyloidosis ,Klinisk laboratoriemedicin ,Cell and molecular biology ,nomenclature ,business ,Cell and Molecular Biology ,030217 neurology & neurosurgery - Abstract
The nomenclature committee of the International Society of Amyloidosis (ISA) meets every second year to discuss and formulate recommendations. The conclusions from the discussion at the XVI International Symposium on Amyloidosis in Kumamoto, Japan, 25–29 March 2018 and afterwards are summarized in this Nomenclature Article. From having recommended the use of the designation “amyloid fibril” for in vivo material only, ISA’s nomenclature committee now accepts its use more broadly following the international scientific literature. However, it is important always to stress the origin of the β-fibrils in order to avoid misunderstanding. Given the more broad use of the word “amyloid” several classes of amyloid fibrils may be distinguished. For the medical in vivo situation, and to be included in the amyloid nomenclature list, “amyloid” still means mainly extracellular tissue deposits of protein fibrils, recognized by specific properties, such as green-yellow birefringence after staining with Congo red. It should also be underlined that in vivo amyloid fibrils, in addition to the main protein contain associated compounds, particularly serum amyloid P-component (SAP) and proteoglycans, mainly heparan sulfate proteoglycan. With this definition there are presently 36 human amyloid proteins of which 14 appear only associated with systemic amyloidosis and 19 as localized forms. Three proteins can occur both as localized and systemic amyloidosis. Strictly intracellular aggregates are not included in this list.
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- 2018
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26. Pool deconvolution approach for high-throughput gene mining from Bacillus thuringiensis
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Sarvjeet Kaur, Bhupendra Singh Panwar, Chet Ram, and Rakesh Kumar Narula
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DNA, Bacterial ,0301 basic medicine ,biology ,Toxin ,Nomenclature Committee ,030106 microbiology ,Bacillus thuringiensis ,High-Throughput Nucleotide Sequencing ,Sequence assembly ,General Medicine ,Computational biology ,medicine.disease_cause ,biology.organism_classification ,Applied Microbiology and Biotechnology ,DNA sequencing ,Gene mining ,Microbiology ,03 medical and health sciences ,030104 developmental biology ,Genes, Bacterial ,medicine ,Gene ,Bacteria ,Biotechnology - Abstract
Novel genes from Bacillus thuringiensis (Bt) are required for effective deployment in agriculture, human health, and forestry. In an improvement over conventional PCR-based screening, next generation sequencing (NGS) has been used for identification of new genes of potential interest from Bt strains, but cost becomes a constraint when several isolates are to be sequenced. We demonstrate the potential of a DNA pooling strategy known as pool deconvolution to identify commercially important toxin genes from 36 native Bt isolates. This strategy is divided into three steps: (a) DNA pooling, (b) short read sequence assembly followed by gene mining, and (c) host isolate identification. With this approach, we have identified insecticidal protein (ip) genes including nine three-domain (3D) cry genes, three cyt-type genes, three mtx genes (mosquitocidal toxin), and one bin and vip-type gene each. Three cry-type and three cyt-type genes were cloned, out of which, two cry-type genes, ip11 and ip13, were named as cry4Ca2 and cry52Ca1, respectively by the Bacillus thuringiensis nomenclature committee ( http://www.biols.susx.ac.uk/Home/Neil_Crickmore/BT/ ). Our results show that the pool deconvolution approach is well suited for high-throughput gene mining in bacteria.
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- 2017
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27. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: Other ion channels
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John A. Peters, Neil V. Marrion, Christopher Southan, Stephen P.H. Alexander, Jamie A. Davies, Adam J. Pawson, Joanna L. Sharman, Elena Faccenda, Simon D. Harding, and Eamonn Kelly
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0301 basic medicine ,Pharmacology ,03 medical and health sciences ,030104 developmental biology ,Clinical pharmacology ,Nomenclature Committee ,law ,Summary information ,Computer science ,Catalytic receptors ,Ion channel ,law.invention - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13881/full. Other ion channels are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, voltage-gated ion channels, nuclear hormone receptors, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.
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- 2017
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28. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: Overview
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Leigh Stoddart, Henry Sackin, Stephen Tucker, Katherine Leach, Daniel Hoyer, Eric Prossnitz, Julien Hanson, Michael Spedding, Jérôme Leprince, Thiruma Arumugam, Lucie Clapp, Marta Fumagalli, Raul R Gainetdinov, David Clapham, Craig McArdle, Peter Monk, Detlev Boison, Stefan Offermanns, Susan Pyne, Gareth Sanger, Joanna Sharman, David MacEwan, Ken-ichi Inui, Cyril Goudet, Victoria Blaho, Elena Faccenda, Bernhard Bettler, Roger Summers, Nan Chiang, Gregory David Stewart, Anthony Futerman, Davide Lecca, Jörg Hamann, Simon Douglas Harding, Anthony Peter Davenport, Trent Woodruff, Mark Connor, Israel Hanukoglu, Adam Pawson, Bernard MOUILLAC, Stefania Ceruti, Nicholas Holliday, Arthur Christopoulos, Stefan Broer, Jamie Davies, Paul Chazot, Ian Kerr, Christopher Southan, William Catterall, Jyrki Kukkonen, and Elvir Becirovic
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0301 basic medicine ,Pharmacology ,Clinical pharmacology ,Nomenclature Committee ,business.industry ,3. Good health ,law.invention ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Summary information ,law ,Medicine ,Catalytic receptors ,business ,030217 neurology & neurosurgery - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 is the third in this series of biennial publications. This version provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13882/full. In addition to this overview, in which are identified 'Other protein targets' which fall outside of the subsequent categorisation, there are eight areas of focus: G protein-coupled receptors, ligand-gated ion channels, voltage-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.
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- 2017
- Full Text
- View/download PDF
29. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: Ligand-gated ion channels
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Stephen P.H. Alexander, Simon D. Harding, Neil V. Marrion, Christopher Southan, John A. Peters, Elena Faccenda, Adam J. Pawson, Eamonn Kelly, Jamie A. Davies, and Joanna L. Sharman
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0301 basic medicine ,Pharmacology ,Clinical pharmacology ,Nomenclature Committee ,Computer science ,law.invention ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Summary information ,law ,Ligand-gated ion channel ,Catalytic receptors ,030217 neurology & neurosurgery - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13879/full. Ligand-gated ion channels are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, voltage-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.
- Published
- 2017
- Full Text
- View/download PDF
30. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: Voltage-gated ion channels
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Eamonn Kelly, Adam J. Pawson, Christopher Southan, Jörg Striessnig, John A. Peters, Neil V. Marrion, Jamie A. Davies, Elena Faccenda, Simon D. Harding, Stephen P.H. Alexander, and Joanna L. Sharman
- Subjects
0301 basic medicine ,Pharmacology ,Clinical pharmacology ,Voltage-gated ion channel ,Computer science ,Nomenclature Committee ,law.invention ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Summary information ,law ,Catalytic receptors ,030217 neurology & neurosurgery - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13884/full. Voltage-gated ion channels are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.
- Published
- 2017
- Full Text
- View/download PDF
31. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: Transporters
- Author
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Joanna L. Sharman, Adam J. Pawson, Christopher Southan, Neil V. Marrion, Jamie A. Davies, John A. Peters, Elena Faccenda, Stephen P.H. Alexander, Eamonn Kelly, and Simon D. Harding
- Subjects
0301 basic medicine ,Pharmacology ,Clinical pharmacology ,business.industry ,Nomenclature Committee ,law.invention ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,law ,Summary information ,Medicine ,Catalytic receptors ,business ,030217 neurology & neurosurgery - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13883/full. Transporters are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, voltage-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors and enzymes. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.
- Published
- 2017
- Full Text
- View/download PDF
32. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: Catalytic receptors
- Author
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Jamie A. Davies, Simon D. Harding, Eamonn Kelly, Elena Faccenda, John A. Peters, Doriano Fabbro, Joanna L. Sharman, Stephen P.H. Alexander, Adam J. Pawson, Neil V. Marrion, and Christopher Southan
- Subjects
0301 basic medicine ,Pharmacology ,Clinical pharmacology ,Nomenclature Committee ,Computer science ,law.invention ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Summary information ,law ,Catalytic receptors ,030217 neurology & neurosurgery - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13876/full. Catalytic receptors are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, voltage-gated ion channels, other ion channels, nuclear hormone receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.
- Published
- 2017
- Full Text
- View/download PDF
33. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: Nuclear hormone receptors
- Author
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Christopher Southan, Joanna L. Sharman, Adam J. Pawson, Stephen P.H. Alexander, John A. Cidlowski, Jamie A. Davies, Simon D. Harding, John A. Peters, Neil V. Marrion, Elena Faccenda, and Eamonn Kelly
- Subjects
0301 basic medicine ,Pharmacology ,Clinical pharmacology ,Nomenclature Committee ,business.industry ,law.invention ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,law ,Summary information ,Medicine ,Catalytic receptors ,business ,030217 neurology & neurosurgery - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13880/full. Nuclear hormone receptors are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, voltage-gated ion channels, other ion channels, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate. © 2015 The British Pharmacological Society.
- Published
- 2017
- Full Text
- View/download PDF
34. Report of the Nomenclature Committee for Vascular Plants: 69
- Author
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WendyL. Applequist
- Subjects
0106 biological sciences ,Nomenclature Committee ,Library science ,Plant Science ,Biology ,010603 evolutionary biology ,01 natural sciences ,Ecology, Evolution, Behavior and Systematics ,010606 plant biology & botany - Published
- 2017
- Full Text
- View/download PDF
35. Mineralogy of Meteorites from the North-Eastern India: A Brief Review
- Author
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G. Parthasarathy, Rashmi R. Borah, and Bhaskar J. Saikia
- Subjects
0301 basic medicine ,030102 biochemistry & molecular biology ,Nomenclature Committee ,Earth science ,Ureilite ,01 natural sciences ,Eastern india ,010305 fluids & plasmas ,Total known weight ,03 medical and health sciences ,Meteorite ,Chondrite ,0103 physical sciences ,Geology - Abstract
We present a brief overview of meteorites from the north-eastern India, with a focus on falls, finds, and research developments. To date, out of a total 150 numbers of meteorites fall/find in India (in Meteoritical Bulletin Database), only six meteorites from north-eastern region have received official international recognition from the Nomenclature Committee of the Meteoritical Society. Among these six meteorites, 2 finds and 4 falls, including one ureilite, two H chondrites and three L chondrites. The first meteorite from north-eastern India (Assam L5, Find) was documented in 1846. After a lack of 153 years, the first fall (Sabrum LL6 chondrite) was documented in 1999. The most recent fall is Kamargaon (L6) chondrite in 2015. Intensively researched meteorites of this region are Goalpara and Dergaon. The reported most massive meteorite of north-eastern India is Mahadevpur (H4/5) chondrite, 70.5 kg of total known weight, and the rest are
- Published
- 2017
- Full Text
- View/download PDF
36. Defining the fascial system
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Carla Stecco, Robert Schleip, Gil Hedley, Can A. Yucesoy, and Sue Adstrum
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Complementary and Manual Therapy ,030222 orthopedics ,business.industry ,Nomenclature Committee ,Rehabilitation ,Terminologia Anatomica ,Connective tissue ,Physical Therapy, Sports Therapy and Rehabilitation ,Anatomy ,Fascia ,Terminology ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Complementary and alternative medicine ,Medicine ,Anatomical terminology ,business ,Anatomical terms of location ,030217 neurology & neurosurgery - Abstract
Fascia is a widely used yet indistinctly defined anatomical term that is concurrently applied to the description of soft collagenous connective tissue, distinct sections of membranous tissue, and a body pervading soft connective tissue system. Inconsistent use of this term is causing concern due to its potential to confuse technical communication about fascia in global, multiple discipline- and multiple profession-spanning discourse environments. The Fascia Research Society acted to address this issue by establishing a Fascia Nomenclature Committee (FNC) whose purpose was to clarify the terminology relating to fascia. This committee has since developed and defined the terms a fascia, and, more recently, the fascial system. This article reports on the FNC's proposed definition of the fascial system.
- Published
- 2017
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- View/download PDF
37. Alignment-Free Method to Predict Enzyme Classes and Subclasses
- Author
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M. Natália D. S. Cordeiro and Riccardo Concu
- Subjects
0301 basic medicine ,Quantitative structure–activity relationship ,Databases, Factual ,Computer science ,Quantitative Structure-Activity Relationship ,Computational biology ,alignment-free ,01 natural sciences ,Sensitivity and Specificity ,Catalysis ,Article ,Inorganic Chemistry ,lcsh:Chemistry ,03 medical and health sciences ,Physical and Theoretical Chemistry ,enzyme classification ,Molecular Biology ,lcsh:QH301-705.5 ,Spectroscopy ,chemistry.chemical_classification ,010405 organic chemistry ,Nomenclature Committee ,QSAR ,Organic Chemistry ,Computational Biology ,Proteins ,General Medicine ,Class (biology) ,0104 chemical sciences ,Computer Science Applications ,Enzymes ,enzyme ,030104 developmental biology ,Order (biology) ,Enzyme ,machine learning ,chemistry ,Nonlinear Dynamics ,lcsh:Biology (General) ,lcsh:QD1-999 ,Peptidyl Transferases ,Linear Models ,Numerical classification ,Algorithms ,artificial neural network - Abstract
The Enzyme Classification (EC) number is a numerical classification scheme for enzymes, established using the chemical reactions they catalyze. This classification is based on the recommendation of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology. Six enzyme classes were recognised in the first Enzyme Classification and Nomenclature List, reported by the International Union of Biochemistry in 1961. However, a new enzyme group was recently added as the six existing EC classes could not describe enzymes involved in the movement of ions or molecules across membranes. Such enzymes are now classified in the new EC class of translocases (EC 7). Several computational methods have been developed in order to predict the EC number. However, due to this new change, all such methods are now outdated and need updating. In this work, we developed a new multi-task quantitative structure&ndash, activity relationship (QSAR) method aimed at predicting all 7 EC classes and subclasses. In so doing, we developed an alignment-free model based on artificial neural networks that proved to be very successful.
- Published
- 2019
- Full Text
- View/download PDF
38. Nomenclature of Subchondral Nonneoplastic Bone Lesions
- Author
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Felix M. Gonzalez, Nicholas M. Beckmann, D. Lee Bennett, Ian Amber, Miriam A. Bredella, Leon Lenchik, Eric Y. Chang, Carl S. Winalski, B. Matthew Howe, Tetyana Gorbachova, Leah C. Davis, and Barry G. Hansford
- Subjects
medicine.medical_specialty ,business.industry ,Nomenclature Committee ,General Medicine ,Skeletal radiology ,Patient care ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Subchondral bone ,Bone lesion ,030220 oncology & carcinogenesis ,Expert opinion ,Terminology as Topic ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Radiology ,Bone Diseases ,business ,Nomenclature ,Cartilage Diseases ,Medical literature - Abstract
OBJECTIVE. The purpose of this article is to summarize the nomenclature of nonneoplastic conditions affecting subchondral bone through a review of the medical literature and expert opinion of the Society of Skeletal Radiology Subchondral Bone Nomenclature Committee. CONCLUSION. This consensus statement summarizes current understanding of the pathophysiologic characteristics and imaging findings of subchondral nonneoplastic bone lesions and proposes nomenclature to improve effective communication across clinical specialties and help avoid diagnostic errors that could affect patient care.
- Published
- 2019
39. The nomenclature committee of the international society of amyloidosis: back towards 'green birefringence'
- Author
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Alexander J. Howie
- Subjects
Pathology ,medicine.medical_specialty ,Birefringence ,Amyloid ,business.industry ,Nomenclature Committee ,Amyloidosis ,education ,Polarization Microscopy ,030204 cardiovascular system & hematology ,medicine.disease ,Congo red ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,chemistry ,Internal Medicine ,medicine ,Humans ,business ,030217 neurology & neurosurgery - Abstract
Before 2014, the Nomenclature Committee of the International Society of Amyloidosis said that amyloid stained by Congo red showed green birefringence when viewed by polarization microscopy. In 2014...
- Published
- 2019
40. The molecular machinery of regulated cell death
- Author
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Tom Vanden Berghe, Guido Kroemer, Peter Vandenabeele, Daolin Tang, Rui Kang, Guangzhou University, University of Texas Southwestern Medical Center [Dallas], Universiteit Gent = Ghent University (UGENT), University of Antwerp (UA), Université Sorbonne Paris Cité (USPC), Centre de Recherche des Cordeliers (CRC (UMR_S_1138 / U1138)), École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université Paris Diderot - Paris 7 (UPD7)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU), Service de biologie [CHU HEGP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpital Européen Georges Pompidou [APHP] (HEGP), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO), Karolinska University Hospital [Stockholm], Gestionnaire, Hal Sorbonne Université, and Universiteit Gent = Ghent University [Belgium] (UGENT)
- Subjects
Necrosis ,NF-KAPPA-B ,PROGRAMMED ,[SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC] ,Review Article ,GASDERMIN-D ,Antioxidants ,0302 clinical medicine ,OXIDATIVE STRESS ,Regulated Cell Death ,TUMOR-NECROSIS-FACTOR ,0303 health sciences ,Effector ,NECROSIS ,Pyroptosis ,3. Good health ,Cell biology ,Caspases ,Receptor-Interacting Protein Serine-Threonine Kinases ,Tumor necrosis factor alpha ,medicine.symptom ,Intracellular ,DOMAIN-LIKE PROTEIN ,Cell signalling ,Cell death ,Programmed cell death ,Necroptosis ,Biology ,NONCANONICAL ,03 medical and health sciences ,medicine ,MIXED LINEAGE KINASE ,[SDV.BC.BC] Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC] ,Humans ,Molecular Biology ,030304 developmental biology ,Biology and Life Sciences ,Membrane Proteins ,Cell Biology ,DNA ,AIM2 INFLAMMASOME ,NFKB1 ,Oxidative Stress ,INFLAMMASOME ACTIVATION ,NOMENCLATURE COMMITTEE ,Human medicine ,Reactive Oxygen Species ,Protein Kinases ,030217 neurology & neurosurgery - Abstract
International audience; Cells may die from accidental cell death (ACD) or regulated cell death (RCD). ACD is a biologically uncontrolled process, whereas RCD involves tightly structured signaling cascades and molecularly defined effector mechanisms. A growing number of novel non-apoptotic forms of RCD have been identified and are increasingly being implicated in various human pathologies. Here, we critically review the current state of the art regarding non-apoptotic types of RCD, including necroptosis, pyroptosis, ferroptosis, entotic cell death, netotic cell death, parthanatos, lysosome-dependent cell death, autophagy-dependent cell death, alkaliptosis and oxeiptosis. The in-depth comprehension of each of these lethal subroutines and their intercellular consequences may uncover novel therapeutic targets for the avoidance of pathogenic cell loss.
- Published
- 2019
- Full Text
- View/download PDF
41. Report of the Nomenclature Committee for Vascular Plants: 68
- Author
-
Wendy L. Applequist
- Subjects
0106 biological sciences ,Geography ,Nomenclature Committee ,Library science ,Plant Science ,010603 evolutionary biology ,01 natural sciences ,Ecology, Evolution, Behavior and Systematics ,010606 plant biology & botany - Published
- 2016
- Full Text
- View/download PDF
42. GENETIC CHARACTERISTICS OF THE POPULATION LIVING IN THE TERRITORY OF THE REPUBLIC OF BASHKORTOSTAN
- Author
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M. A. Loginova, I. V. Paramonov, V. N. Pavlov, and G. Sh. Safuanova
- Subjects
0301 basic medicine ,Veterinary medicine ,haplotypes ,RD1-811 ,Population ,Human leukocyte antigen ,Biology ,03 medical and health sciences ,0302 clinical medicine ,human leukocyte antigen ,Immunology and Allergy ,Sequence-based Typing ,Allele ,education ,Allele frequency ,new alleles ,Genetics ,Transplantation ,education.field_of_study ,Nomenclature Committee ,Haplotype ,030104 developmental biology ,frequency ,alleles ,Russian federation ,Surgery ,030215 immunology - Abstract
Sequence based typing was used to identify human leukocyte antigen (HLA)-A, -B, -C, -DRB1 alleles in 1,064 recruited volunteers in the Republic of Bashkortostan of the Russian Federation for unrelated hematopoietic stem cell registry. During the carried out research two new alleles were identified in the studied population; one was registered in the WHO Nomenclature Committee for Factors of the HLA System, the other one was submitted for registration. In this population 17 HLA-A, 29 – HLA-B, 13 – HLA-C, 13 – HLA-DRB1 groups of alleles were selected. Allele frequencies of more than 10% included HLA-A*02 (29.37%), 24 (12.92%), 01 (11.84%), 03 (11.61%), HLA-B*35 (11.51%), 07 (10.76%), HLA-C*07 (22.56%), 06 (15.51%), 04 (13.06%), 03 (10.43%), 12 (10.24%), HLA-DRB1*07 (17.25%), 15 (12.73%), 13 (11.98%), 01 (11.84%), 04 (11.61%). 711 HLA-A-B-C-DRB1 four-locus haplotypes were determined using the software Arlequin v.3.1. The most frequently observed four-locus haplotypes were A*02-B*13-C*06-DRB1*07, A*03-B*35-C*07-DRB1*15, A*02- B*07-C*07-DRB1*15 with frequencies of 2.89%, 2.18% and 1.93%, respectively. The distribution of alleles and haplotype analysis allowed comparing the populations of the Republic of Bashkortostan with the other Russian populations.
- Published
- 2016
43. Nomenclature for factors of the HLA system, update November 2015
- Author
-
Steven G.E. Marsh
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Nomenclature Committee ,Immunology ,Human leukocyte antigen ,Biology ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Family medicine ,Genetics ,medicine ,Immunology and Allergy ,Nomenclature ,030215 immunology - Published
- 2016
- Full Text
- View/download PDF
44. New Proposal to Define the Fascial System
- Author
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Beatrice Sacconi, Bruno Morabito, Roberto Castagna, Fabiola Marelli, Bruno Bordoni, and Paul Mazzucco
- Subjects
0301 basic medicine ,030222 orthopedics ,Nomenclature Committee ,Computer science ,Embryonic germ ,Fascia ,Epistemology ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,Complementary and alternative medicine ,Terminology as Topic ,medicine ,Animals ,Humans ,Epidermis - Abstract
At the beginning of the third millennium, we still do not have a definition of ‘fascia' recognized as valid by every researcher. This article attempts to give a new definition of the fascial system, including the epidermis, by comparing the mechanical-metabolic characteristics of the connective tissue and the skin. In fact, according to the latest classification deriving from the Fascia Nomenclature Committee, the outer skin layer is not considered as part of the fascial continuum. This article highlights the reasons for taking the functional characteristics of the tissue into consideration, rather than its mere structure. A brief discussion will address the questions as to what is considered as fascial tissue and from which embryonic germ layer the epidermis is formed. The notion that all the layers intersect will be highlighted, demonstrating that quoting precise definitions of tissue stratification in the living organism probably does not correspond to what happens in vivo. What we propose as a definition is not to be regarded as a point of arrival but as another departure.
- Published
- 2018
45. Report of the Nomenclature Committee for Algae: 20
- Author
-
Robert A. Andersen
- Subjects
Thesaurus (information retrieval) ,Engineering ,Algae ,biology ,business.industry ,Nomenclature Committee ,Library science ,Plant Science ,business ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Published
- 2019
- Full Text
- View/download PDF
46. Report of the Nomenclature Committee on Fossils: 9
- Author
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Patrick S. Herendeen
- Subjects
Geography ,Nomenclature Committee ,Library science ,Plant Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2015
- Full Text
- View/download PDF
47. Accepted Trichoderma names in the year 2015
- Author
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John Bissett, Walter M. Jaklitsch, Gary J. Samuels, and Walter Gams
- Subjects
Lists of Protected Names ,Nomenclature Committee ,Nomenclature ,Hypocrea ,Trichoderma virens ,Pleomorphic fungi ,Hypocrea patella ,Biology ,biology.organism_classification ,Agricultural and Biological Sciences (miscellaneous) ,Article ,Trichoderma ,Botany ,Hypocreales ,Humanities ,Ecology, Evolution, Behavior and Systematics - Abstract
A list of 254 names of species and two names of varieties in Trichoderma with name or names against which they are to be protected, following the ICN (Melbourne Code, Art. 14.13), is presented for consideration by the General Committee established by the Congress, which then will refer them to the Nomenclature Committee for Fungi (NCF). This list includes 252 species, one variety and one form. Two new names are proposed: T. neocrassum Samuel (syn. Hypocrea crassa P. Chaverri & Samuels), T. patellotropicum Samuels (syn. Hypocrea patella f. tropica Yoshim. Doi). The following new combinations in Trichoderma are proposed: T. brevipes (Mont.) Samuels, T. cerebriforme (Berk.) Samuels, T. latizonatum (Peck) Samuels, and T. poronioideum (A. Moller) Samuels. The following species are lectotypified: T. americanum (Canham) Jaklitsch & Voglmayr, Gliocladium flavofuscum J.H. Miller, Giddens & A.A. Foster, T. inhamatum Veerkamp & W. Gams, T. konilangbra Samuels, O. Petrini & C.P. Kubicek, T. koningii Oudem., T. pezizoides (Berk. & Broome) Jaklitsch & Voglmayr, T. sulphureum (Schwein.) Jaklitsch & Voglmayr and T. virens (J.H. Miller, Giddens & A.A. Foster) Arx. Epitypes are proposed for the following species: T. albocorneum (Yoshim. Doi) Jaklitsch & Voglmayr, T. albofulvum (Berk. & Broome) Jaklitsch & Voglmayr, T. atrogelatinosum (Dingley) Jaklitsch & Voglmayr, T. corneum (Pat.) Jaklitsch & Voglmayr, T. cornu-damae (Pat.) Z.X. Zhu & W.Y. Zhuang, T. flaviconidium (P. Chaverri, Druzhinina & Samuels) Jaklitsch & Voglmayr, T. hamatum (Bonord.) Bain., T. hunua (Dingley) Jaklitsch & Voglmayr, T. patella (Cooke & Peck) Jaklitsch & Voglmayr, Hypocrea patella f. tropica Yoshim. Doi, T. polysporum (Link) Rifai, T. poronioideum (A. Moller) Samuels T. semiorbis (Berk.) Jaklitsch & Voglmayr, T. sulphureum (Schwein.) Jaklitsch & Voglmayr, and T. tropicosinense (P.G. Liu) P.G. Liu, Z.X. Zhu & W.Y. Zhuang.
- Published
- 2015
48. THE CONCISE GUIDE TO PHARMACOLOGY 2017/18:Enzymes
- Author
-
Stephen P.H. Alexander, Adam J. Pawson, Christopher Southan, Neil V. Marrion, John A. Peters, Simon D. Harding, Joanna L. Sharman, Jamie A. Davies, Elena Faccenda, Eamonn Kelly, and Doriano Fabbro
- Subjects
0301 basic medicine ,Pharmacology ,Clinical pharmacology ,Databases, Pharmaceutical ,Nomenclature Committee ,business.industry ,Knowledge Bases ,The Concise Guide to Pharmacology 2017/18 ,Ligands ,Enzymes ,law.invention ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Summary information ,law ,Journal Article ,Animals ,Humans ,Medicine ,Catalytic receptors ,business ,030217 neurology & neurosurgery - Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13877/full. Enzymes are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, voltage-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.
- Published
- 2017
- Full Text
- View/download PDF
49. NOMENCLATURE FOR FACTORS OF THE HLA SYSTEM, UPDATE JANUARY/FEBRUARY 1997
- Author
-
Sge Marsh
- Subjects
Accession number (library science) ,Nomenclature Committee ,Molecular Sequence Data ,Immunology ,MEDLINE ,Human leukocyte antigen ,General Medicine ,Biology ,Biochemistry ,Genealogy ,HLA Antigens ,Terminology as Topic ,GenBank ,Genetics ,Humans ,Immunology and Allergy ,Nomenclature ,Sequence (medicine) - Abstract
The following sequences have been submitted to the Nomenclature Committee in the period following the publication of the last report “Nomenclature for factors of the HLA system, 1996” and, following agreed policy, have been assigned official allele designations. Full details of all sequences will be published in the forthcoming report “Nomenclature for factors of the HLA system, 1997”. Below are listed the newly assigned sequences, confirmations of previously reported sequences and some sequences which are corrections of those originally reported. The accession number of each sequence is given and these can be used to retrieve the sequence files from either the EMBL, GenBank or DDBJ data libraries. Although accession numbers have been assigned by the data libraries and most sequences are already available, there is still the possibility that an author may not yet have allowed the sequence to be released; in such a case, you will have to contact the submitting author directly.
- Published
- 2017
50. Pathophysiological Implications of Dipeptidyl Peptidases
- Author
-
Akira Sato and Hisakazu Ogita
- Subjects
0301 basic medicine ,Dipeptidyl Peptidase 4 ,medicine.medical_treatment ,Computational biology ,Biology ,Biochemistry ,Dipeptidyl peptidase ,Mice ,03 medical and health sciences ,medicine ,Animals ,Humans ,Hypoglycemic Agents ,Obesity ,Metabolic disease ,Dipeptidyl-Peptidases and Tripeptidyl-Peptidases ,Molecular Biology ,Dipeptidyl peptidase-4 ,Dipeptidyl-Peptidase IV Inhibitors ,Protease ,Nomenclature Committee ,Immune regulation ,Cell Biology ,General Medicine ,Isoenzymes ,030104 developmental biology ,Diabetes Mellitus, Type 2 ,Gene Expression Regulation ,Hypertension ,Proteolysis ,Signal Transduction - Abstract
Dipeptidyl peptidases (DPPs) belong to one of the protease families classified under EC 3.4.14 in the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology. DPPs family consists of eight members in the mammalian species. They play a role in oligopeptide N-terminal processing and degradation of bioactive peptides. Over the past 20 years, most of the studies have been focused on DPP 4 that has important roles in metabolism and immunity. A large number of pharmacological inhibitors against DPP 4 have been tested rigorously and some of them are now used in the treatment of type 2 diabetes and obesity. In addition, current researches cast a spotlight on other physiological and pathological functions of DPP family members such as DPP 3 for the purpose of investigating their application as novel therapeutic compounds. In this review, we provide an update about the pathophysiological functions of DPPs, and discuss the future potential of the DPP family as pharmacological and therapeutic agents and targets.
- Published
- 2017
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