1. Differential poisoning of topoisomerases by menogaril and nogalamycin dictated by the minor groove-binding nogalose sugar.
- Author
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Sim SP, Gatto B, Yu C, Liu AA, Li TK, Pilch DS, LaVoie EJ, and Liu LF
- Subjects
- Anti-Bacterial Agents toxicity, Base Sequence drug effects, DNA Damage drug effects, DNA Footprinting, DNA Topoisomerases, Type I physiology, DNA Topoisomerases, Type II metabolism, Deoxyribonuclease I, Enzyme Stability drug effects, Methylmannosides chemistry, Nogalamycin chemistry, Tetracyclines, DNA drug effects, DNA metabolism, DNA Topoisomerases, Type I drug effects, Menogaril toxicity, Methylmannosides metabolism, Nogalamycin toxicity
- Abstract
The effect of DNA binding on poisoning of human DNA TOP1 has been studied using a pair of related anthracyclines which differ only by a nogalose sugar ring. We show that the nogalose sugar ring of nogalamycin, which binds to the minor groove of DNA, plays an important role in affecting topoisomerase-specific poisoning. Using purified mammalian topoisomerases, menogaril is shown to poison topoisomerase II but not topoisomerase I. By contrast, nogalamycin poisons topoisomerase I but not topoisomerase II. Consistent with the biochemical studies, CEM/VM-1 cells which express drug-resistant TOP2alpha are cross-resistant to menogaril but not nogalamycin. The mechanism by which nogalamycin poisons topoisomerase I has been studied by analyzing a major topoisomerase I-mediated DNA cleavage site induced by nogalamycin. This site is mapped to a sequence embedded in an AT-rich region with four scattered GC base pairs (bps) (at -10, -6, +2, and +12 positions). GC bps embedded in AT-rich regions are known to be essential for nogalamycin binding. Surprisingly, DNase I footprinting analysis of nogalamycin-DNA complexes has revealed a drug-free region from -2 to +9 encompassing the major cleavage site. Our results suggest that nogalamycin, in contrast to camptothecin, may stimulate TOP1 cleavage by binding to a site(s) distal to the site of cleavage.
- Published
- 1997
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