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In this paper, we present a cost-effective approach to the assessment of the impact of fish cage culture in transitional water bodies characterized by limited exchanges with the sea. The approach, previously applied to marine coastal areas, is based on two steps: (1) the application of a Lagrangian model, driven by purposely collected data concerning the local hydrodynamic, for an “a priori” simulation of the dispersion of uneaten feed and fecal material from a cage; (2) the collection of a set of field data concerning both water column and sediment indicators, sensitive to the release of organic matter from a cage, along a transect: the latter is determined on the basis of the results provided by the dispersion model. The methodology was tested at a seabass/seabream farm located in a coastal lake on the Nile Delta, namely Lake Maryut. Model results indicated that the area impacted by the cage is relatively small, about 5 m from the edge of the cage: this finding was later corroborated by field observations. As far as the water column is concerned, Dissolved Inorganic Nitrogen was found to be higher near the farm. The most sensitive sediment indicators were found to be surface sediment TOC, and benthic macrofauna abundances, which were, respectively, higher and lower in the proximity of the farm. These findings suggest that a cost-effective monitoring programme of the environmental impact of intensive aquaculture could be implemented in Egyptian coastal Lakes, thus providing a science-based support to the implementation of the ecosystem approach to aquaculture in these important ecosystems.

Forty two sediment samples were collected from four River Nile northern delta lakes (Mariut, Edku, Burullus and Manzalah) to asses the man-made impact on their environment during the last 20 years. Due to the continuous discharge of agricultural, industrial and sewage waste waters to these lakes, significant variations in the sediment's nature took place, with fine fractions dominating opposite to the outflowing area of the main drains. Organic carbon was elevated at the southern regions, reaching 10.5 ± 4.5% in lake Mariut. Meanwhile, carbonate increased reaching 90% for samples collected at the lake-sea connection areas. The 0.5 N HCl extractable metals indicated enriched levels of different metals at sites affected by sewage and industrial discharge. This fraction constituted 75 and 81% of the total metals in Lakes Mariut and Manzalah, respectively. Extractable Cd for Lakes Mariut and Manzalah constituted 51 and 53%, respectively, while Pb formed 59% of the total digestable metal in Lake Manzalah. Total metals concentrations especially Cd and Pb were elevated 8 to 70 times than those observed in the same lakes 25 years ago. The conversion of the untreated sewage discharge of Alexandria city to Lake Mariut and significant portion of Cairo sewage to Lake Manzalah during the past 10 years lead to the appearance of elevated levels of contaminants in both lakes. Agricultural discharge showed less impact on Lakes Edku and Burullus. Cluster analysis revealed associations between stations located under same types of stress while the correspondence factor analysis displayed that metals distribution pattern in the Nile delta lakes are governed by organic carbon as well as fine grained size fraction distribution.