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Accelerometery is revolutionising the field of behavioural ecology through its capacity to detect the fine-scale movements of animals resulting from their behaviour. Because it is often difficult to infer the behaviour of wildlife on a continuous basis, particularly for cryptic species, accelerometers potentially provide powerful tools for remote monitoring of their behavioural responses to the environment.The goal of this study was to provide a detailed, calibrated methodology, including practical guidelines, to infer the behaviour of free-ranging animals from acceleration data. This approach can be employed to reliably infer the time budget of species that are difficult to observe in certain environments or at certain times of the day. To this end, we trained several behavioural classification algorithms with accelerometer data obtained on captive roe deer, then validated these algorithms with data obtained on free-ranging roe deer, and finally predicted the time-budgets of a substantial sample of unobserved free-ranging roe deer in a human-dominated landscape.The best classification algorithm was the Random Forest which predicted five behavioural classes with a high overall level of accuracy (≈ 90%). Except for grooming (34-38%), we were able to predict the behaviour of free-ranging roe deer over the course of a day with high accuracy, in particular, foraging head down, running, walking and immobile (68-94%). Applied to free-ranging individuals, the classification allowed us to estimate, for example, that roe deer spent about twice as much time foraging head-down, walking or running during dawn and dusk than during daylight or night-time.By integrating step by step calibration and validation of accelerometer data prior to application in the wild, our approach is transferable to other free-ranging animals for predicting key behaviours in cryptic species.

The behavioural trade-off between foraging and risk avoidance is expected to be particularly acute during gestation and lactation, when the energetic demands of reproduction peak. We investigated how female roe deer, an income breeding ungulate, adjust their management of this trade-off during the birth period in terms of foraging activity and habitat use. We showed that activity levels of reproductive females more than doubled immediately following parturition, when energy demand is highest. Moreover, reproductive females increased their use of open habitat during daytime and ranged closer to roads, but slightly further from refuge woodland, compared to non-reproductive females. However, these post-partum modifications in behaviour were particularly pronounced in late-parturient females who adopted a more risk prone tactic, presumably to compensate for the fitness handicap of their late-born offspring. In income breeders, individuals that give birth late may be forced to trade risk avoidance for resource acquisition during peak allocation to reproduction, likely with significant fitness consequences.

Context The Complementary Habitat Hypothesis posits that animals access resources for different needs by moving between complementary habitats that can be seen as ‘resource composites’. These movements can occur over a range of temporal scales, from diurnal to seasonal, in response to multiple drivers such as access to food, weather constraints, risk avoidance and human disturbance. Within this framework, we hypothesised that large herbivores cope with human-altered landscapes through the alternate use of complementary habitats at both daily and seasonal scales. Objectives We tested the Complementary Habitat Hypothesis in European roe deer (Capreolus capreolus) by classifying 3900 habitat-annotated movement trajectories of 154 GPS-monitored individuals across contrasting landscapes. Methods We considered day-night alternation between open food-rich and closed refuge habitats as a measure of complementary habitat use. We first identified day–night alternation using the Individual Movement - Sequence Analysis Method, then we modelled the proportion of day–night alternation over the year in relation to population and individual characteristics. Results We found that day-night alternation is a widespread behaviour in roe deer, even across markedly different landscapes. Day–night alternation followed seasonal trends in all populations, partly linked to vegetation phenology. Within populations, seasonal patterns of open/closed habitat alternation differed between male and female adults, but not in juveniles. Conclusion Our results support the Complementary Habitat Hypothesis by showing that roe deer adjust their access to the varied resources available in complex landscapes by including different habitats within their home range, and sequentially alternating between them in response to seasonal changes and individual life history.

Aim: Macroecological studies that require habitat suitability data for many species often derive this information from expert opinion. However, expert- based informa-tion is inherently subjective and thus prone to errors. The increasing availability of GPS tracking data offers opportunities to evaluate and supplement expert- based in-formation with detailed empirical evidence. Here, we compared expert- based habitat suitability information from the International Union for Conservation of Nature (IUCN) with habitat suitability information derived from GPS-tracking data of 1,498 individu-als from 49 mammal species.Location: Worldwide.Time period: 1998–2021.Major taxa studied: Forty- nine terrestrial mammal species.Methods: Using GPS data, we estimated two measures of habitat suitability for each individual animal: proportional habitat use (proportion of GPS locations within a habi-tat type), and selection ratio (habitat use relative to its availability). For each individual we then evaluated whether the GPS- based habitat suitability measures were in agree-ment with the IUCN data. To that end, we calculated the probability that the ranking of empirical habitat suitability measures was in agreement with IUCN's classification into suitable, marginal and unsuitable habitat types.Results: IUCN habitat suitability data were in accordance with the GPS data (> 95% probability of agreement) for 33 out of 49 species based on proportional habitat use estimates and for 25 out of 49 species based on selection ratios. In addition, 37 and 34 species had a > 50% probability of agreement based on proportional habitat use and selection ratios, respectively.Main conclusions: We show how GPS-tracking data can be used to evaluate IUCN habitat suitability data. Our findings indicate that for the majority of species in-cluded in this study, it is appropriate to use IUCN habitat suitability data in macro-ecological studies. Furthermore, we show that GPS-tracking data can be used to identify and prioritize species and habitat types for re-evaluation of IUCN habitat suitability data. expert opinion, GPS, habitat suitability, habitat type, habitat use, IUCN, mammals, movement, selection ratio, telemetry

Accurate heritability estimates for fitness-related traits are required to predict an organism's ability to respond to global change. Heritability estimates are theoretically expected to be inflated if, due to limited dispersal, individuals that share genes are also likely to share similar environments. However, if relatives occupy similar environments due, at least partly, to genetic variation for habitat selection, then accounting for environmental similarity in quantitative genetic models may result in diminished heritability estimates in wild populations. This potential issue has been pointed out in the literature, but has not been evaluated by empirical studies. Here, we investigate whether environmental similarity among individuals can be partly explained by genetic variation for habitat selection, and how this link potentially blurs estimates for heritability in fitness-related traits. Using intensive GPS monitoring, we quantified home-range habitat composition for 293 roe deer inhabiting a heterogeneous landscape to assess environmental similarity. To investigate if environmental similarity might harbour genetic variation, we combined genome-wide data in a quantitative genetic framework to evaluate genetic variation for home-range habitat composition, which is partly the result of habitat selection at settlement. Finally, we explored how environmental similarity affects heritability estimates for behaviours related to the risk avoidance-resource acquisition trade-off (i.e. being in open habitat and distance to roads) and proxies of individual performance (i.e. body mass and hind foot length). We found substantial heritability for home-range habitat composition, with estimates ranging from 0.40 (proportion of meadows) to 0.85 (proportion of refuge habitat). Accounting for similarity in habitat composition between relatives decreased the heritability estimates for both behavioural and morphological traits (reduction ranging from 55% to 100% and from 22% to 41% respectively). As a consequence, only half of these heritability estimates remained significantly different from zero. Our results show that similar genotypes occupy similar environments, which could lead to heritable variation being incorrectly attributed to environmental effects. To accurately distinguish the sources of phenotypic variation and predict the ability of organisms to respond to global change, it is necessary to develop quantitative genetic studies investigating the mechanisms underpinning environmental similarity among relatives.

International audience; Life histories are strongly age dependent, notably linked to the onset of reproductive maturity and subsequent senescence. Consequently, ageing is predicted to impact behaviour, through the expression of either mating tactics in males or neonatal antipredator tactics in females. However, the influence of ageing, and the associated reproductive activity, on spatial behaviour remains poorly investigated. In this regard, we quantified age- and sex-specific intra-annual variation in movement rates and space use of two large herbivores with contrasting life histories: the roe deer, Capreolus capreolus, an asocial species with a territorial male mating strategy and a hider neonatal tactic, and the Mediterranean mouflon, Ovis gmelini musimon × Ovis sp., a gregarious species with a roaming male mating strategy and a follower neonatal tactic. We expected age-related differences to be mostly related to (1) age-specific mating tactics during the rut for males and the presence/absence of offspring for females, and (2) experience and/or locomotory senescence otherwise. During the rutting period, older roe deer males travelled greater daily distances than younger males due to patrolling behaviours for territory defence, whereas older mouflon males travelled less than younger males, which often adopted coursing tactics to mate with females. During the birth period, reproductive females had smaller home ranges than nonreproductive females in roe deer, whereas no marked differences were observed in mouflon females. The most marked age-related variation in space use of mouflon occurred outside the reproductive periods; specifically, the oldest individuals travelled less far and had a smaller home range (females only) than younger individuals. Our findings illustrate how space use tactics vary within and between populations of large herbivores, providing strong evidence that age and reproductive activity are major determinants of their spatial behaviour. © 2020 The Association for the Study of Animal Behaviour

Deer (Cervidae) are key components of many ecosystems and estimating deer abundance or density is important to understanding these roles. Many field methods have been used to estimate deer abundance and density, but the factors determining where, when, and why a method was used, and its usefulness, have not been investigated. We systematically reviewed journal articles published during 2004–2018 to evaluate spatio-temporal trends in study objectives, methodologies, and deer abundance and density estimates, and determine how they varied with biophysical and anthropogenic attributes. We also reviewed the precision and bias of deer abundance estimation methods. We found 3,870 deer abundance and density estimates. Most estimates (58%) were for white-tailed deer (Odocoileus virginianus), red deer (Cervus elaphus), and roe deer (Capreolus capreolus). The 6 key methods used to estimate abundance and density were pedestrian sign (track or fecal) counts, pedestrian direct counts, vehicular direct counts, aerial direct counts, motion-sensitive cameras, and harvest data. There were regional differences in the use of these methods, but a general pattern was a temporal shift from using harvest data, pedestrian direct counts, and aerial direct counts to using pedestrian sign counts and motion-sensitive cameras. Only 32% of estimates were accompanied by a measure of precision. The most precise estimates were from vehicular spotlight counts and from capture–recapture analysis of images from motion-sensitive cameras. For aerial direct counts, capture–recapture methods provided the most precise estimates. Bias was robustly assessed in only 16 studies. Most abundance estimates were negatively biased, but capture–recapture methods were the least biased. The usefulness of deer abundance and density estimates would be substantially improved by 1) reporting key methodological details, 2) robustly assessing bias, 3) reporting the precision of estimates, 4) using methods that increase and estimate detection probability, and 5) staying up to date on new methods. The automation of image analysis using machine learning should increase the accuracy and precision of abundance estimates from direct aerial counts (visible and thermal infrared, including from unmanned aerial vehicles [drones]) and motion-sensitive cameras, and substantially reduce the time and cost burdens of manual image analysis.

International audience; Toll-like Receptors (TLR) play a central role in recognition and host frontline defence against a wide range of pathogens. A number of recent studies have shown that TLR genes (Tlrs) often exhibit large polymorphism in natural populations. Yet, there is little knowledge on how this polymorphism is maintained and how it influences disease susceptibility in the wild. In previous work, we showed that some Tlrs exhibit similarly high levels of genetic diversity as genes of the Major Histocompatibility Complex (MHC), and signatures of contemporary balancing selection in roe deer (Capreolus capreolus), the most abundant cervid species in Europe. Here, we investigated the evolutionary mechanisms by which pathogen-mediated selection could shape this innate immunity genetic diversity by examining the relationships between Tlr (Tlr2, Tlr4 and Tlr5) genotypes (heterozygosity status and presence of specific alleles) and infections with Toxoplasma and Chlamydia, two widespread intracellular pathogens known to cause reproductive failure in ungulates. We showed that Toxoplasma and Chlamydia exposures vary significantly across year and landscape structure with few co-infection events detected, and that the two pathogens exert antagonistic selection on Tlr2 polymorphism. By contrast, we found limited support for Tlr heterozygote advantage. Our study confirmed the importance of looking beyond Mhc genes in wildlife immunogenetic studies. It also emphasized the necessity to consider multiple pathogen challenges and their spatiotemporal variation to improve our understanding of vertebrate defence evolution against pathogens.

International audience; Evolution should favour plasticity in dispersal decisions in response to spatial heterogeneity in social and environmental contexts. Sex differences in individual optimization of dispersal decisions are poorly documented in mammals, because species where both sexes commonly disperse are rare. To elucidate the sex-specific drivers governing dispersal, we investigated sex differences in condition dependence in the propensity and distance of natal dispersal in one such species, the roe deer, using fine-scale monitoring of 146 GPS-collared juveniles in an intensively monitored population in southwest France. Dispersal propensity increased with body mass in males such that 36% of light individuals dispersed, whereas 62% of heavy individuals did so, but there was no evidence for condition dependence in dispersal propensity among females. By contrast, dispersal distance increased with body mass at a similar rate in both sexes such that heavy dispersers travelled around twice as far as light dispersers. Sex differences in the strength of condition-dependent dispersal may result from different selection pressures acting on the behaviour of males and females. We suggest that females disperse prior to habitat saturation being reached, likely in relation to the risk of inbreeding. By contrast, natal dispersal in males is likely governed by competitive exclusion through male–male competition for breeding opportunities in this strongly territorial mammal. Our study is, to our knowledge, a first demonstration that condition dependence in dispersal propensity and dispersal distance may be decoupled, indicating contrasting selection pressures drive the behavioural decisions of whether or not to leave the natal range, and where to settle.

International audience; Studying the factors determining the sizes of home ranges, based on body mass, feeding style, and sociality level, is a long-standing goal at the intersection of ecology and evolution. Yet, how species-specific life history traits interact with different components of the landscape to shape differences in individual home ranges at within-population level has received much less attention. Here, we review the empirical literature on ungulates to map our knowledge of the relative effects of the key environmental drivers (resource availability, landscape heterogeneity, lethal and non-lethal risks) on the sizes of individual home ranges within a population and assess whether species' characteristics (body mass, diet, and social structure), account for observed variation in the responses of the sizes of individual home ranges to local environmental drivers. Estimating the sizes of home ranges and measuring environmental variables raise a number of methodological issues, which complicate the comparison of empirical studies. Still, from an ecological point of view, we showed that (1) a majority of papers (75%) supported the habitat productivity hypothesis, (2) the support for the influence of landscape heterogeneity was less pervasive across studies, (3) the response of cattle-type to variation in food availability was stronger than the response of moose-type, and (4) species-specific body mass or sociality level had no detectable effect on the level of support to the biological hypotheses. To our surprise, our systematic review revealed a dearth of studies focusing on the ecological drivers of the variation in the sizes of individual home ranges (only about 1% of articles that dealt with home ranges), especially in the later decade where more focus has been devoted to movement. We encourage researchers to continue providing such results with sufficient sample sizes and robust methodologies, as we still need to fully understand the link between environmental drivers and individual space use while accounting for life-history constraints.

International audience; 1. The timing of birth has a predominant influence on both the reproductive success of the mother and the life-history trajectory of her offspring. Because early growth and survival are key drivers of population dynamics, there is an urgent need to understand how global change is affecting reproductive phenology and performance. However, identifying when and where birth occurs is often difficult in the wild due to the cryptic behaviour of females around parturition, although this information may also help managers to protect reproductive females and newborn against human disturbance. While several approaches to identify parturition based on movement metrics derived from GPS monitoring have previously been proposed, their performance has not been evaluated over a range of species with contrasted movement characteristics.2. Here, we present a novel approach to detect parturition by combining data on animal movements, activity rate and habitat use. Using machine learning approaches, we evaluated the relative and combined performance of each category of metrics in predicting parturition for three large herbivores with contrasted life histories: a hider-type species, the roe deer Capreolus capreolus and two follower-type species, the Mediterranean mouflon Ovis gmelini musimon x Ovis sp. and the Alpine ibex Capra ibex.3. We first showed that detection of parturition was much improved when birth-related modifications in the habitat use and activity rate of the mother were considered, rather than relying on movement metrics only. We then demonstrated that our approach was highly successful (76%-100% of events correctly identified) in detecting parturition in both follower and hider species. Furthermore, our approach generated estimates for peak birth date and the proportion of parturient females that were comparable with those based on direct observations at the population scale. Finally, our approach outperformed the most commonly employed methods in the literature which generally failed to identify non-reproductive females for the three studied species, and provided birth timing estimates that only poorly match the true parturition date.4. We suggest that by combining sources of information, we have developed a standardised methodological approach for inferring parturition in the wild, not only for large herbivores but also for any species where parturition induces marked behavioural changes in the mother.

International audience; Understanding the consequences of global change for animal movement is a major issue for conservation and management. In particular, habitat fragmentation generates increased densities of linear landscape features that can impede movements. While the influence of these features on animal movements has been intensively investigated, they may also play a key role at broader spatial scales (e.g. the home range scale) as resources, cover from predators/humans, corridors/barriers or landmarks. How space use respond to varying densities of linear features has been mostly overlooked in large herbivores, in contrast to studies done on predators. Focusing on large herbivores should provide additional insights to understand how animals solve the trade-off between energy acquisition and mortality risk. Here, we investigated the role of anthropogenic (roads and tracks) and natural (ridges, valley bottoms and forest edges) linear features on home range features in five large herbivores. We analysed an extensive GPS monitoring database of 710 individuals across nine populations, ranging from mountain areas mostly divided by natural features to lowlands that were highly fragmented by anthropogenic features. Nearly all of the linear features studied were found at the home range periphery, suggesting that large herbivores primarily use them as landmarks to delimit their home range. In contrast, for mountain species, ridges often occurred in the core range, probably related to their functional role in terms of resources and refuge. When the density of linear features was high, they no longer occurred predominantly at the home range periphery, but instead were found across much of the home range. We suggest that, in highly fragmented landscapes, large herbivores are constrained by the costs of memorising the spatial location of key features, and by the requirement for a minimum area to satisfy their vital needs. These patterns were mostly consistent in both males and females and across species, suggesting that linear features have a preponderant influence on how large herbivores perceive and use the landscape.

Alpine large herbivores have developed physiological and behavioural mechanisms to cope with fluctuations in climate and resource availability that may become maladaptive under climate warming. We tested this hypothesis in female Alpine ibex (Capra ibex) by modelling annual and daily movement and activity patterns in relation to temperature, vegetation productivity and reproductive status based on bio‐logging data and climate change projections. In summer, ibex moved upslope, tracking the green wave. Ibex decreased diel activity sharply above a threshold temperature of 13–14°C, indicating thermal stress, but compensated behaviourally by foraging both earlier and later in the day, and by moving further upslope than on cooler days, especially reproductive females. This critical temperature will be exceeded three times as often under climate change projections. Under such scenarios, the altitudinal extent of the area will limit the available habitat providing thermal shelter, potentially impacting performance and population distribution of this emblematic mountain ungulate., We assessed the behavioral mechanisms of female Alpine ibex (Capra ibex) to cope with fluctuations in climate and resource availability that may become maladaptive under climate warming. Ibex optimized the use of resources along the Alpine altitudinal gradient by tracking the seasonal green wave. Further, females responded to temperatures exceeding 13–14°C by redistributing the foraging time throughout the day and moving upslope, especially reproductive individuals. Under climate change scenarios, increasingly hotter conditions will limit the possibility for behavioural compensation, especially in Alpine ranges with a limited altitudinal extent.

International audience; Although inter‐individual heterogeneity in many aspects of dispersal behaviour is widely reported, this key life‐history trait is predominantly modelled as a dichotomous state of philopatry versus dispersal. The increasing body of evidence for dispersal syndromes (i.e. a suite of correlated morphological, behavioural and life‐history traits associated with dispersal) implies substantial but, to date, undocumented individual heterogeneity in behavioural tactics during dispersal. Using a large sample (n = 154) of GPS monitored juvenile roe deer Capreolus capreolus, we evaluated among‐individual behavioural heterogeneity in dispersal tactics, and the individual and environmental drivers of these alternative tactics. We developed a sequential three‐stage decision tree based on space use stability, exploration events and the directionality of movement. We identified six discrete alternative behavioural tactics during the dispersal period which were characterised by different timing, amplitude and duration in movement: slightly less than half of the deer were sedentary, either ‘strictly philopatric’ or ‘explorers’, which subsequently settled on their natal range; around 40% dispersed (‘classic dispersal’), of which, one in six subsequently aborted, moving back to their natal range (‘aborted dispersal’); finally, around 15% expressed either a ‘progressive dispersal’ tactic, gradually moving away from their natal area to settle elsewhere, or a ‘multi‐range’ tactic. The propensity to express an alternative dispersal tactic was strongly influenced by an individual's local environment. In particular, when landscape heterogeneity, resource quality and human‐related disturbance in the natal range were low, individuals were 1) more likely to adopt the alternative tactics of either progressive dispersal or multi‐ranging, but 2) also more likely to abort their dispersal attempt. Our work indicates that natal dispersal is likely not a single uniform behaviour, but that individuals may adopt a variety of alternative movement tactics which are likely governed by different selection pressures, with potentially important impacts for population dynamics and functioning.

International audience; Assessing the evolutionary potential of animal populations in the wild is crucial to understanding how they may respond to selection mediated by rapid environmental change (e.g. habitat loss and fragmentation). A growing number of studies have investigated the adaptive role of behaviour, but assessments of its genetic basis in a natural setting remain scarce. We combined intensive biologging technology with genome‐wide data and a pedigree‐free quantitative genetic approach to quantify repeatability, heritability and evolvability for a suite of behaviours related to the risk avoidance‐resource acquisition trade‐off in a wild roe deer (Capreolus capreolus) population inhabiting a heterogeneous, human‐dominated landscape. These traits, linked to the stress response, movement and space‐use behaviour, were all moderately to highly repeatable. Furthermore, the repeatable among‐individual component of variation in these traits was partly due to additive genetic variance, with heritability estimates ranging from 0.21±0.08 to 0.70±0.11 and evolvability ranging from 1.1 to 4.3%. Changes in the trait mean can therefore occur under hypothetical directional selection over just a few generations. To the best of our knowledge, this is the first empirical demonstration of additive genetic variation in space‐use behaviour in a free‐ranging population based on genomic relatedness data. We conclude that wild animal populations may have the potential to adjust their spatial behaviour to human‐driven environmental modifications through micro‐evolutionary change.

Summary Animals exhibit a diversity of movement tactics [ 1 ]. Tracking resources that change across space and time is predicted to be a fundamental driver of animal movement [ 2 ]. For example, some migratory ungulates (i.e., hooved mammals) closely track the progression of highly nutritious plant green-up, a phenomenon called “green-wave surfing” [ 3 , 4 , 5 ]. Yet general principles describing how the dynamic nature of resources determine movement tactics are lacking [ 6 ]. We tested an emerging theory that predicts surfing and the existence of migratory behavior will be favored in environments where green-up is fleeting and moves sequentially across large landscapes (i.e., wave-like green-up) [ 7 ]. Landscapes exhibiting wave-like patterns of green-up facilitated surfing and explained the existence of migratory behavior across 61 populations of four ungulate species on two continents (n = 1,696 individuals). At the species level, foraging benefits were equivalent between tactics, suggesting that each movement tactic is fine-tuned to local patterns of plant phenology. For decades, ecologists have sought to understand how animals move to select habitat, commonly defining habitat as a set of static patches [ 8 , 9 ]. Our findings indicate that animal movement tactics emerge as a function of the flux of resources across space and time, underscoring the need to redefine habitat to include its dynamic attributes. As global habitats continue to be modified by anthropogenic disturbance and climate change [ 10 ], our synthesis provides a generalizable framework to understand how animal movement will be influenced by altered patterns of resource phenology.

Much research on large herbivore movement has focused on the annual scale to distinguish between resident and migratory tactics, commonly assuming that individuals are sedentary at the within-season scale. However, apparently sedentary animals may occupy a number of sub-seasonal functional home ranges (sfHR), particularly when the environment is spatially heterogeneous and/or temporally unpredictable. The roe deer (Capreolus capreolus) experiences sharply contrasting environmental conditions due to its widespread distribution, but appears markedly sedentary over much of its range. Using GPS monitoring from 15 populations across Europe, we evaluated the propensity of this large herbivore to be truly sedentary at the seasonal scale in relation to variation in environmental conditions. We studied movement using net square displacement to identify the possible use of sfHR. We expected that roe deer should be less sedentary within seasons in heterogeneous and unpredictable environments, while migratory individuals should be seasonally more sedentary than residents. Our analyses revealed that, across the 15 populations, all individuals adopted a multi-range tactic, occupying between two and nine sfHR during a given season. In addition, we showed that (i) the number of sfHR was only marginally influenced by variation in resource distribution, but decreased with increasing sfHR size; and (ii) the distance between sfHR increased with increasing heterogeneity and predictability in resource distribution, as well as with increasing sfHR size. We suggest that the multirange tactic is likely widespread among large herbivores, allowing animals to track spatio-temporal variation in resource distribution and, thereby, to cope with changes in their local environment. Migration · Residency · Sub-seasonal functional home range · Plasticity · Roe deer

International audience; 1. Dispersal is a key mechanism enabling species to adjust their geographic range to rapid global change. However, dispersal is costly and environmental modifications are likely to modify the cost–benefit balance of individual dispersal decisions, for example, by decreasing functional connectivity. 2. Dispersal costs occur during departure, transience and settlement, and are levied in terms of energy, risk, time and lost opportunity, potentially influencing individual fitness. However, to the best of our knowledge, no study has yet quantified the energetic costs of dispersal across the dispersal period by comparing dispersing and philopatric individuals in the wild. 3. Here, we employed animal‐borne biologgers on a relatively large sample (N = 105) of juvenile roe deer to estimate energy expenditure indexed using the vector of dynamic body acceleration and mobility (distance travelled) in an intensively monitored population in the south‐west of France. We predicted that energy expenditure would be higher in dispersers compared to philopatric individuals. We expected costs to be (a) particularly high during transience, (b) especially high in the more fragmented areas of the landscape and (c) concentrated during the night to avoid disturbance caused by human activity. 4. There were no differences in energy expenditure between dispersers and philopatric individuals during the pre‐dispersal phase. However, dispersers expended around 22% more energy and travelled around 63% further per day than philopatric individuals during transience. Differences in energy expenditure were much less pronounced during the settlement phase. The costs of transience were almost uniquely confined to the dawn period, when dispersers spent 23% more energy and travelled 112% further than philopatric individuals. Finally, the energetic costs of transience per unit time and the total distance travelled to locate a suitable settlement range were higher in areas of high road density. 5. Our results provide strong support for the hypothesis that natal dispersal is energetically costly and indicate that transience is the most costly part of the process, particularly in fragmented landscapes. Further work is required to link dispersal costs with fitness components so as to understand the likely outcome of further environmental modifications on the evolution of dispersal behaviour.

We tested whether proximity to sources of anthropogenic disturbance influenced baseline stress levels of a wild ungulate in relation to their space use behaviour. We found that faecal cortisol metabolites increased as distance to human infrastructure decreased, but this relationship was buffered by the use of refuge habitats during daytime., Wildlife populations are increasingly exposed to human-induced modifications of their habitats. To cope with anthropogenic stressors, animals can adjust their behaviour—for example, by shifting their activity to more sheltered habitats, or becoming more nocturnal. However, whether use of spatial and temporal adjustments in behaviour may regulate the endocrine response is poorly documented. Here, we analyzed faecal cortisol metabolites (FCMs) of wild roe deer (Capreolus capreolus) living in a human-dominated agro-ecosystem. Using Global Positioning System monitoring of 116 individuals, we assessed their spatial behaviour and tested whether proximity to anthropogenic structures (linear distance to built-up areas) and the use of refuge habitats (woodland and hedges) influenced FCM levels. In accordance with our predictions, individuals ranging closer to anthropogenic structures during daytime had higher FCM levels, but this relationship was buffered as use of refuge habitat increased. In addition, this link between proximity to anthropogenic structures and FCM levels disappeared when we analyzed spatial behaviour at night. Finally, FCM levels were higher when the ambient temperature was lower, and during years of low resource availability. Our results demonstrate that the stress levels of large mammals may be strongly influenced by their proximity to anthropogenic activities, but that these effects may be buffered by behavioural adjustments in terms of space use and circadian rhythm. Whereas most studies have focused on the influence of environmental heterogeneity, our analysis highlights the need to also consider the fine-scale spatial response of individuals when studying the hormonal response of wild animals to human disturbance. We emphasize the potential to mitigate this hormonal stress response, and its potential negative consequences on population dynamics, through the preservation or restoration of patches of refuge habitat in close proximity to human infrastructure.

Humans, as super predators, can have strong effects on wildlife behaviour, including profound modifications of diel activity patterns. Subsequent to the return of large carnivores to human-modified ecosystems, many prey species have adjusted their spatial behaviour to the contrasting landscapes of fear generated by both their natural predators and anthropogenic pressures. The effects of predation risk on temporal shifts in diel activity of prey, however, remain largely unexplored in human-dominated landscapes. We investigated the influence of the density of lynx Lynx lynx, a nocturnal predator, on the diel activity patterns of their main prey, the roe deer Capreolus capreolus, across a gradient of human disturbance and hunting at the European scale. Based on 11 million activity records from 431 individually GPS-monitored roe deer in 12 populations within the EURODEER network (http://eurodeer.org), we investigated how lynx predation risk in combination with both lethal and non-lethal human activities affected the diurnality of deer. We demonstrated marked plasticity in roe deer diel activity patterns in response to spatio-temporal variations in risk, mostly due to human activities. In particular, roe deer decreased their level of diurnality by a factor of 1.37 when the background level of general human disturbance was high. Hunting exacerbated this effect, as during the hunting season deer switched most of their activity to night-time and, to a lesser extent, to dawn, although this pattern varied noticeably in relation to lynx density. Indeed, in the presence of lynx, their main natural predator, roe deer were relatively more diurnal. Overall, our results revealed a strong influence of human activities and the presence of lynx on diel shifts in roe deer activity. In the context of the recovery of large carnivores across Europe, we provide important insights about the effects of predators on the behavioural responses of their prey in human-dominated ecosystems. Modifications in the temporal partitioning of ungulate activity as a response to human activities may facilitate human-wildlife coexistence, but likely also have knock-on effects for predator-prey interactions, with cascading effects on ecosystem functioning.Résumé Les humains, en tant que ‘super-prédateurs’, peuvent avoir des effets importants sur le comportement de la faune sauvage, y compris des modifications profondes de leurs rythmes circadiens d'activité. A la suite du retour des grands carnivores dans les écosystèmes anthropisés, de nombreuses espèces proies ont ajusté leur comportement spatial à ces paysages de la peur contrastés, générés à la fois par les pressions liées aux risques anthropiques et à la présence de leurs prédateurs naturels. Les effets du risque de prédation sur les modifications temporelles des rythmes circadiens d'activité des proies restent cependant largement inconnus dans les écosystèmes dominés par l'homme. Ici, nous avons étudié l'influence de la densité de lynx Lynx lynx, un prédateur nocturne, sur les rythmes circadiens d'activité de leur proie principale, le chevreuil Capreolus capreolus, à travers un gradient de pressions anthropiques à l’échelle Européenne. Sur la base de plus de 11 million de données d'activité issues de 431 suivis individuels de chevreuils équipés de colliers GPS provenant de 12 populations au sein du réseau EURODEER (http://eurodeer.org), nous avons analysé comment le risque de prédation par le lynx, associé aux risques létaux et non-létaux des activités humaines, influence la diurnalité des chevreuils. Nous avons démontré une forte plasticité des rythmes circadiens d'activité des chevreuils en réponse aux variations spatio-temporelles du risque, et notamment face aux activités humaines. Plus particulièrement, les chevreuils diminuent leur degré de diurnalité d'un facteur de 1.37 lorsque le dérangement humain est important. La chasse accentue cet effet, puisque durant la saison de chasse les chevreuils basculent la plupart de leur activité de nuit, et dans une moindre mesure, durant l'aube également, bien que ce patron soit essentiellement variable en fonction de la densité de lynx. En effet, en présence de lynx, leur principal prédateur, les chevreuils sont relativement plus diurnes. Globalement, nos résultats révèlent une forte influence des activités humaines et de la présence de lynx sur l'ajustement des rythmes circadiens d'activité des chevreuils. Dans le contexte du retour des grands carnivores en Europe, notre étude apporte de nouvelles connaissances sur les effets des prédateurs sur la réponse comportementale de leur proie dans des écosystèmes anthropisés. La modification de la répartition temporelle de l'activité des ongulés en réponse aux activités humaines pourrait être un facteur facilitant la coexistence homme-faune sauvage, avec toutefois des conséquences autres sur les interactions prédateurs-proies et leurs effets en cascade sur le fonctionnement des écosystèmes.

The most common framework under which ungulate migration is studied predicts that it is driven by spatio–temporal variation in plant phenology, yet other hypotheses may explain differences within and between species. To disentangle more complex patterns than those based on single species/ single populations, we quantified migration vari-ability using two sympatric ungulate species differing in their foraging strategy, mating system and physiological constraints due to body size. We related observed variation to a set of hypotheses. We used GPS-collar data from 537 individuals in 10 roe Capreolus capreolus and 12 red deer Cervus elaphus populations spanning environmental gra-dients across Europe to assess variation in migration propensity, distance and tim-ing. Using time-to-event models, we explored how the probability of migration varied in relation to sex, landscape (e.g. topography, forest cover) and temporally-varying environmental factors (e.g. plant green-up, snow cover). Migration propensity varied across study areas. Red deer were, on average, three times more migratory than roe deer (56% versus 18%). This relationship was mainly driven by red deer males which were twice as migratory as females (82% versus 38%). The probability of roe deer migration was similar between sexes. Roe deer (both sexes) migrated earliest in spring. While territorial male roe deer migrated last in autumn, male and female red deer migrated around the same time in autumn, likely due to their polygynous mating system. Plant productivity determined the onset of spring migration in both species, but if plant productivity on winter ranges was sufficiently high, roe deer were less likely to leave. In autumn, migration coincided with reduced plant productivity for both species. This relationship was stronger for red deer. Our results confirm that ungulate migration is influenced by plant phenology, but in a novel way, that these effects appear to be modulated by species-specific traits, especially mating strategies.

Toll-like Receptors (TLR) play a central role in recognition and host frontline defence against a wide range of pathogens. A number of recent studies have shown that TLR genes (Tlrs) often exhibit a large polymorphism in natural populations. Yet, there is little knowledge on how this polymorphism is maintained and how it influences disease susceptibility in the wild. In a previous work, we showed that someTlrsexhibit similarly high levels of genetic diversity thanMhcand contemporary signatures of balancing selection in roe deer (Capreolus capreolus), an abundant and widespread ungulate in Europe.Here, we tested whether Mhc-DrborTlr(Tlr2, Tlr4andTlr5) diversity is driven bypathogen-mediated selection. Weexamined the relationships between their genotype (heterozygosity status and presence of specific alleles) and infections withToxoplasmaandChlamydia, two intracellular pathogens known to cause reproductive failure in ungulates. We showed thatToxoplasmaandChlamydiaexposures vary significantly across year and landscape structure with few co-infection events detected, and that the two pathogens act antagonistically onTlr2polymorphism. By contrast, we found no evidence of association withMhc-Drband a limited support forTlrheterozygosity advantage. Our study confirmed the importance of looking beyondMhcgenes in wildlife immunogenetic studies. It also emphasized the necessity to consider multiple pathogen challenges and their spatiotemporal variation to improve our understanding of vertebrate defence evolution against pathogens.

International audience; Although individuals must generally trade off acquisition of high-quality resources against predation risk avoidance, removal of top predators by humans has resulted in many large herbivores experiencing novel conditions where their natural predators are absent. Antipredator behaviors should be attenuated or lost in such a context of relaxed predation pressure. To test this prediction, we analyzed daily and seasonal habitat selection and activity rhythm (both commonly linked to predation risk) of GPS-collared Sitka black-tailed deer (Odocoileus hemionus sitkensis Merriam, 1898) on predator-free islands (British Columbia, Canada). In marked contrast to the behavioral patterns commonly observed in populations subject to predation risk, we documented a very low day-night contrast in habitat selection. Moreover, we observed higher activity during daytime than nighttime, as expected for nonhunted populations. We also showed that resource selection was primarily driven by seasonal variations in resource availability. These results are consistent with the expected attenuation of antipredator behaviors in predation-free environments. However, we also observed marked crepuscular activity peaks, which are commonly interpreted as an antipredator response in ungulates. Our study indicates that large herbivores are able to adjust certain antipredator behaviors under relaxed selection, notably habitat selection and activity rhythm, while others persist despite the long-term absence of predators.; Les individus font face a` un compromis entre acquérir des ressources de qualité et éviter leurs prédateurs. De nombreuses populations de grands herbivores évoluent dans des environnements où leurs prédateurs naturels sont maintenant absents. Dans ces conditions, les comportements anti-prédateurs des individus devraient être amoindris, voire supprimés. Nous avons testé cette hypothèse en analysant les patrons journaliers et saisonniers de sélection des habitats et d’activité de cerfs Sitka a` queue-noire (Odocoileus hemionus sitkensis Merriam, 1898) vivant sur des îles exemptes de tout risque de prédation en Colombie Britannique (Canada). A la différence de ce qui est communément observé dans des populations soumises au risque de prédation, le contraste jour-nuit dans la sélection des habitats est peu marqué. L’activité est plus importante de jour que de nuit, comme attendu pour des populations non-chassées. De plus, la sélection des ressources est principalement influencée par les variations saisonnières et spatiales de leur disponibilité. Ces résultats sont cohérents avec une atténuation des comportements anti-prédateurs attendue dans des environnements exempts de risque de prédation. Cependant, des pics d’activité crépusculaires marqués persistent, qui sont pourtant communément interprétés comme des réponses anti-prédatrices. Notre étude montre donc qu’en l’absence de risque de prédation, certains comportements anti-prédateurs peuvent être ajustés, alors que d’autres sont maintenus.

International audience; We studied the seasonal activity pattern of the Kuhl’s pipistrelle Pipistrellus kuhlii in eight sites of the Bou Hedma National Park, central Tunisia, from June 2010 to June 2011, using both mistnetting and acoustic bat detection. Pipistrelles were captured all year-round only at water bodies. Captures peaked in late spring and early autumn. Pregnant females were observed from March to June, lactating females only in June, and flying juveniles from June to August. Echolocation calls and buzzes were recorded in all sites throughout the year. However, activity varied significantly among months and sites. Activity peaked in June and September after a noteworthy decline in August; the minimum was recorded in December and January. Bats mainly foraged at water bodies and around streetlamps. This result supports the previously reported major role of water bodies for bats in arid environments. Bats also foraged in the open acacia forest in summer, during the flowering period of Acacia Acacia tortilis raddiana. The steppe was the least used habitat. Social calls were mainly recorded in autumn around streetlamps, suggesting a swarming behaviour. Despite being a common bat species in the area, P. kuhlii should deserve conservation efforts that would benefit other bat species.

Made available in DSpace on 2018-11-26T17:44:52Z (GMT). No. of bitstreams: 0 Previous issue date: 2018-01-26 Robert Bosch Foundation Animal movement is fundamental for ecosystem functioning and species survival, yet the effects of the anthropogenic footprint on animal movements have not been estimated across species. Using a unique GPS-tracking database of 803 individuals across 57 species, we found that movements of mammals in areas with a comparatively high human footprint were on average one-half to one-third the extent of their movements in areas with a low human footprint. We attribute this reduction to behavioral changes of individual animals and to the exclusion of species with long-range movements from areas with higher human impact. Global loss of vagility alters a key ecological trait of animals that affects not only population persistence but also ecosystem processes such as predator-prey interactions, nutrient cycling, and disease transmission. Senckenberg Gesell Naturforsch, Senckenberg Biodivers & Climate Res Ctr, D-60325 Frankfurt, Main, Germany Goethe Univ, Dept Biol Sci, D-60438 Frankfurt, Main, Germany Univ Maryland, Dept Biol, College Pk, MD 20742 USA Univ Maryland, SESYNC, Annapolis, MD 21401 USA Univ Guelph, Dept Integrat Biol, Guelph, ON N1G 2W1, Canada Norwegian Inst Nat Res, POB 5685 Torgard, NO-7485 Trondheim, Norway Duke Univ, Dept Biol, Durham, NC 27708 USA Duke Univ, Dept Evolut Anthropol, Durham, NC 27708 USA Hirola Conservat Programme, Garissa, Kenya Swedish Univ Agr Sci, Dept Wildlife Fish & Environm Studies, S-90183 Umea, Sweden Radboud Univ Nijmegen, Dept Anim Ecol & Physiol, Inst Water & Wetland Res, NL-6500 GL Nijmegen, Netherlands Univ Fed Mato Grosso do Sul, Ecol & Conservat Grad Program, Campo Grande, MS, Brazil Univ Alberta, Dept Biol Sci, Edmonton, AB, Canada Univ London, Royal Vet Coll, Struct & Motion Lab, London NW1 0TU, England Wildlife Conservat Soc, Mongolia Program, Ulaanbaatar, Mongol Peo Rep Mississippi State Univ, Forest & Wildlife Res Ctr, Carnivore Ecol Lab, Box 9690, Mississippi State, MS USA Sao Paulo State Univ, Anim Biol Postgra Program, BR-15054000 Sao Jose Do Rio Preto, SP, Brazil Michigan Dept Nat Resources, 1990 US 41 South, Marquette, MI 49855 USA Univ Calif Davis, Dept Anthropol, Davis, CA 95616 USA Aarhus Univ, Dept Biosci, DK-4000 Roskilde, Denmark Max Planck Inst Ornithol, Vogelwarte Radolfzell, D-78315 Radolfzell am Bodensee, Germany Wildlife Conservat Soc, Bronx, NY 10460 USA Univ Potsdam, Plant Ecol & Nat Conservat, D-14476 Potsdam, Germany Middle Tennessee State Univ, Dept Biol, Murfreesboro, TN 37132 USA Univ Pretoria, Dept Zool & Entomol, Mammal Res Inst, ZA-0028 Gauteng, South Africa Fdn Edmund Mach, Res & Innovat Ctr, Dept Biodivers & Mol Ecol, I-38010 San Michele All Adige, TN, Italy Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA Natl Zool Pk, Smithsonian Conservat Biol Inst, Front Royal, VA USA Univ Evora, Depat Fitotecn, P-7002554 Evora, Portugal Univ Evora, ICAAM, Inst Mediterranean Agr & Environm Sci, Evora, Portugal Univ Montpellier, Univ Paul Valery Montpellier, CNRS,EPHE, Ctr Ecol Fonctionnelle & Evolut,UMR 5175, F-34293 Montpellier 5, France Phillip Isl Nat Parks, Cowes, Vic, Australia Monash Univ, Sch Biol Sci, Melbourne, Vic, Australia Ohio State Univ, Dept Civil Environm & Geodet Engn, Columbus, OH 43210 USA Fiji Natl Univ, Dept Biol, POB 5529, Natabua, Lautoka, Fiji Univ Massachusetts, US Geol Survey, Massachusetts Cooperat Fish & Wildlife Res Unit, Amherst, MA 01003 USA Penn State Univ, US Geol Survey, Penn Cooperat Fish & Wildlife Res Unit, University Pk, PA 16802 USA Univ Oxford, Dept Zool, Oxford OX1 3PS, England Giraffe Conservat Fdn, POB 86099, Eros, Namibia German Primate Ctr, Behav Ecol & Sociobiol Unit, D-37077 Gottingen, Germany Tech Univ Munich, Dept Ecol & Ecosyst Management, Restorat Ecol, D-85354 Freising Weihenstephan, Germany Cary Inst Ecosyst Studies, Millbrook, NY 12545 USA Univ British Columbia, Irving K Barber Sch Arts & Sci, Unit 2, Biol, Okanagan Campus, Kelowna, BC V1V 1V7, Canada Univ Zurich, Dept Evolutionary Biol & Environm Studies, CH-8057 Zurich, Switzerland Univ Wyoming, Dept Zool & Physiol, Laramie, WY 82071 USA Univ Washington, Sch Environm & Forest Sci, Seattle, WA 98195 USA Univ Montana, Coll Forestry & Conservat, Dept Ecosyst & Conservat Sci, Wildlife Biol Program, Missoula, MT 59812 USA Bavarian Forest Natl Pk, Dept Conservat & Res, D-94481 Grafenau, Germany Albert Ludwigs Univ Freiburg, Wildlife Ecol & Management, D-79106 Freiburg, Germany Univ Toulouse, INRA, CEFS, Castanet Tolosan, France Univ Calif Davis, Anim Behav Grad Grp, Davis, CA 95616 USA Bionet Natr Onderzoek, NL-6171 EL Stein, Netherlands Univ Vet Med Vienna, Res Inst Wildlife Ecol, A-1160 Vienna, Austria Univ Coll Cork, Sch Biol Earth & Environm Sci, Cork, Ireland Univ Wyoming, US Geol Survey, Dept Zool & Physiol, Wyoming Cooperat Fish & Wildlife Res Unit, Laramie, WY USA North Carolina Museum Nat Sci, Raleigh, NC 27601 USA North Carolina State Univ, Dept Forestry & Environm Resources, Raleigh, NC 27695 USA Karatina Univ, Dept Nat Resource Management, POB 195710101, Karatina, Kenya Univ Lethbridge, Dept Psychol, Lethbridge, AB T1K 3M4, Canada Columbia Univ, Lamont Doherty Earth Observ, Palisades, NY 10964 USA Univ Valencia, Terr Vertebrates Grp, Cavanilles Inst Biodivers & Evolutionary Biol, E-46980 Valencia, Spain SUNY Stony Brook, Dept Anthropol, Stony Brook, NY 11794 USA TSG, SSC, IUCN, Rua Licuala 622,Damha 1,Campo Grande, BR-79046150 Mato Grosso Sul, Brazil IPE Inst Pesquisas Ecol Inst Ecol Res, Caixa Postal 47, BR-12960000 Sao Paulo, Brazil Univ Alicante, Dept Ciencias Ambient & Recursos Natur, Vertebrates Zool Res Grp, Alicante, Spain Embrapa Pantanal, BR-79320900 Corumba, MS, Brazil Chico Mendes Inst Conservat Biodivers, Natl Res Ctr Carnivores Conservat, BR-12952011 Atiba, SP, Brazil Univ Glasgow, Inst Biodivers Anim Hlth & Comparat Med, Glasgow, Lanark, Scotland NYU, Dept Biol, Ctr Genom & Syst Biol, New York, NY 10003 USA Univ Calif Davis, Dept Microbiol & Mol Genet, Davis, CA 95616 USA Univ Oslo, Dept Biosci, Ctr Ecol & Evolutionary Synth, NO-0316 Oslo, Norway Hebrew Univ Jerusalem, Alexander Silberman Inst Life Sci, Dept Ecol Evolut & Behav, Movement Ecol Lab, IL-91904 Jerusalem, Israel Norwegian Inst Nat Res, NO-0349 Oslo, Norway Norwegian Univ Sci & Technol NTNU, Dept Math Sci & Ctr Biodivers Dynam, N-7491 Trondheim, Norway Univ Fed Mato Grosso do Sul, Dept Ecol, BR-79070900 Campo Grande, MS, Brazil Field Museum Nat Hist, Integrat Res Ctr, Chicago, IL 60605 USA Consorzio Parco Nazl Stelvio, Bormio, Sondrio, Italy Univ Grenoble Alpes, Irstea, UR LESSEM, BP 76, F-38402 St Martin Dheres, France Univ Bayreuth, BayCEER, D-95447 Bayreuth, Germany Natl Park Schwarzwald, D-77889 Seebach, Germany Univ New South Wales, Evolut & Ecol Res Ctr, Sydney, NSW 2052, Australia Univ New South Wales, Sch Biol Earth & Environm Sci, Sydney, NSW 2052, Australia Penn Game Commiss, Harrisburg, PA 17110 USA Princeton Univ, Dept Ecol & Evolutionary Biol, Princeton, NJ 08544 USA Univ Konstanz, Dept Biol, D-78467 Constance, Germany Off Natl Chasse & Faune Sauvage, Studies & Expertise DRE, F-01330 Birieux, France Univ Haifa, Dept Evolutionary & Environm Biol, IL-3498838 Haifa, Israel Western Ecosyst Technol Inc, Laramie, WY 82070 USA Aarhus Univ, Arctic Res Ctr, DK-8000 Aarhus C, Denmark Polish Acad Sci, Inst Nat Conservat, PL-31120 Krakow, Poland Univ Porto, CIBIO InBIO Associate Lab, P-4485661 Vairao, Portugal Univ Lisbon, Inst Super Agron, InBIO Associate Lab, Ctr Appl Ecol Prof Baeta Neves, P-1349017 Lisbon, Portugal Univ Lisbon, Fac Ciencias, Ctr Ecol Evolut & Environm Changes, P-1749016 Lisbon, Portugal Univ Calif Davis, Dept Environm Sci & Policy, Davis, CA 95616 USA Jackson Hole Conservat, Jackson, WY 83001 USA Univ Vet Med Hannover, Inst Terr & Aquat Wildlife Res, D-30173 Hannover, Germany Univ Calif Santa Cruz, Environm Studies Dept, Ctr Integrated Spatial Res, Santa Cruz, CA 95060 USA Univ Pretoria, Dept Zool & Entomol, ZA-0028 Hatfield, South Africa Colorado State Univ, Dept Fish Wildlife & Conservat Biol, Ft Collins, CO 80523 USA Tatra Natl Pk, PL-34500 Zakopane, Poland Sao Paulo State Univ, Anim Biol Postgra Program, BR-15054000 Sao Jose Do Rio Preto, SP, Brazil

International audience; Routine movements of large herbivores, often considered as ecosystem engineers, impact key ecological processes. Functional landscape connectivity for such species influences the spatial distribution of associated ecological services and disservices. We studied how spatio-temporal variation in the risk-resource trade-off, generated by fluctuations in human activities and environmental conditions, influences the routine movements of roe deer across a heterogeneous landscape, generating shifts in functional connectivity at daily and seasonal time scales. We used GPS locations of 172 adult roe deer and step selection functions to infer landscape connectivity. In particular, we assessed the influence of six habitat features on fine scale movements across four biological seasons and three daily periods, based on variations in the risk-resource trade-off. The influence of habitat features on roe deer movements was strongly dependent on proximity to refuge habitat, i.e. woodlands. Roe deer confined their movements to safe habitats during daytime and during the hunting season, when human activity is high. However, they exploited exposed open habitats more freely during night-time. Consequently, we observed marked temporal shifts in landscape connectivity, which was highest at night in summer and lowest during daytime in autumn. In particular, the onset of the autumn hunting season induced an abrupt decrease in landscape connectivity. Human disturbance had a strong impact on roe deer movements, generating pronounced spatio-temporal variation in landscape connectivity. However, high connectivity at night across all seasons implies that Europe's most abundant and widespread large herbivore potentially plays a key role in transporting ticks, seeds and nutrients among habitats.

International audience; When they visit and revisit specific areas, animals may reveal what they need from their home range and how they acquire information. The temporal dimension of such movement recursions, that is, periodicity, is however rarely studied, yet potentially bears a species, population or individual‐specific signature.A recent method allows estimating the contribution of periodic patterns to the variance in a movement path. We applied it to 709 individuals from five ungulate species, looking for species signatures in the form of seasonal variation in the intensity of circadian patterns.Circadian patterns were commonplace in the movement tracks, but the amount of variance they explained was highly variable among individuals. It increased in intensity during spring and summer, when key resources were spatially segregated, and decreased during winter, when food availability was more uniformly low. Other periodicity‐inducing mechanisms supported by our comparison of species‐ and sex‐specific patterns involve young antipredator behaviour, territoriality and behavioural thermoregulation.Model‐based continuous‐time movement metrics represent a new avenue for researchers interested in finding individual‐, population‐ or species‐specific signatures in heterogeneous movement databases featuring various study designs and sampling resolutions. However, we observed large amounts of individual variation, so comparative analyses should ideally use both GPS and animal‐borne loggers to augment the discriminatory power and be based on large samples. We briefly outline potential uses of the intensity of circadian patterns as a metric for the study of animal personality and community ecology.

International audience; The balance between resource acquisition and risk avoidance should vary according to personality type, with potential knock-on effects for fitness. Although previous studies have suggested a link between boldness and fitness components, little evidence is available on the behavioural mechanisms mediating this relationship in the wild. Because habitat use is the outcome of the trade-off between the costs and benefits associated with using each habitat type, we evaluated between-individual differences in habitat use of 64 GPS-collared female roe deer, Capreolus capreolus, using multinomial logit mixed models. To investigate whether deer differed in their habitat use tactics in relation to their personality type and their annual reproductive success, we assessed the link between individual habitat use patterns, boldness (measured as the strength of behavioural responsiveness to handling) and annual reproductive success (measured by the presence/absence of fawns at heel during autumn). Although daily and seasonal variations in the risk-resource landscapes clearly drove patterns of habitat use, individuals adopted contrasting habitat use tactics depending on their position along the shy-bold gradient and their reproductive status. Shy individuals occupied safer woodland more frequently, even at night when risk is lower. In contrast, bold individuals were better able to exploit rich open habitats. When this included mature autumn crops, these females weaned more offspring. Finally, irrespective of personality type, females that used meadows more often also achieved higher annual reproductive success. Overall, we demonstrate that individuals express divergent habitat use tactics as a function of their ability to avoid exposure to risk and their annual reproductive success. (C) 2018 The Association for the Study of Animal Behaviour.

This study aimed to (1) identify the scale of environmental drivers of seasonal movements on the migration – residency behavior continuum in a large herbivore species and to (2) test the hypothesis that the same environmental drivers and spatio-temporal scaling should influence spatial processes in both migrants (long distance migration) and residents (short distance range shifts). We performed a comparative analysis of the influence of plant phenology and snow cover duration on seasonal movements of five partially migrating red deer populations with contrasting environmental conditions, at the seasonal range scale and at the study area scale. The five populations presented varying proportions of migrants, large gradients of migration distances and seasonal range shifts. The probability for a red deer to migrate was strongly influenced by large-scale environmental conditions, consistent with the resource heterogeneity hypothesis (high spatio-temporal scaling favors migration). Distances moved by both migrants and residents were strongly related to large-scale environmental conditions as well. We showed that similar proximal causes influenced these seasonal movements, reinforcing the idea of a continuum from migration to residency in response to seasonal environmental changes. Together, our findings suggest that global warming, by homogenizing large-scale environmental conditions, may thus decrease migratory tactics.

International audience; The Western European population of wild boar (Sus scrofa) has increased its distribution over the past several decades, and some populations have colonized areas strongly influenced by human activity. Wild boars are known carriers of antibiotic-resistant bacteria acquired from the environment, and urban populations of wild boars may be more exposed than their rural counterparts. In this work, we compared the frequency of antibiotic resistance in indicator bacteria (Escherichia coli, Enterococcus faecalis, Enterococcus faecium) isolated from urban wild boars with that from rural wild boars in NE Spain. We further assessed whether bacterial isolates from the urban wild boars had a higher probability of showing antibiotic resistance when their host was highly associated to urban features. Seventy-two and 100 bacterial isolates from urban and rural habitat, respectively, were screened for antibiotic resistance against a set of antibiotics (13 per bacterial species). We found a significantly higher frequency of E. faecium showing resistance to tetracycline (70.0% vs 36.4%) and high-level resistance to streptomycin (30.0% vs 4.5%) in urban wild boars compared to rural wild boars (p < 0.05). E. faecalis was more frequently resistant to trimethoprim in urban than rural wild boars (33.3% vs 0.0%, p < 0.05). In isolates from urban origin, 55.6% of the likelihood of detecting antibiotic resistance depended only on the bacterial species, being more likely in the enterococci than in E. coli. These results suggest that urban wild boars may be more exposed to certain antibiotic-resistant bacteria or antibiotic resistance genes that they may acquire from the urban environment, although implications are uncertain.

International audience; Non-consumptive effects of predators result from the cost of responses to perceived risk. Prey modulate risk exposure through flexible habitat selection at multiple scales which, in interaction with landscape constraints, determines their use of risky habitats. Identifying the relative contributions of landscape constraints and habitat selection to risk exposure is a critical first step towards a mechanistic understanding of non-consumptive effects. Here, we provide an integrative multi-scale study of roe deer spatial responses to variable hunting pressure along a landscape gradient of open habitats and dispersed refuges. Between low-risk and high-risk periods, we investigated shifts in 1) home-range location, 2) probability of using risky habitats (between-habitat scale) and 3) distance to the nearest refuge (within-habitat scale). For 2) and 3), we disentangled the contributions of landscape constraints and habitat selection to risky habitat use. We found that when risk was high, roe deer did not shift their home-range, but generally decreased their use of risky habitats, and sometimes reduced their distance to cover (particularly older animals). There was a functional response in between-habitat selection, with animals living in more open landscapes responding more than those living in landscapes with more refuges. However, individuals living in more open landscapes avoided open risky habitat less. Finally, we found that among-individual variation in risk exposure was generally, but not always, minimized by habitat selection across gradients of landscape constraints. To our knowledge, this is the first study simultaneously documenting prey responses to risk at the within-habitat, between-habitat and home-range scales. Our results support the view that between-habitat selection acts at a higher hierarchical level than within-habitat selection, and provide a framework for disentangling the contributions of habitat selection and landscape constraints to risk exposure. Selection cannot always compensate for landscape constraints, indicating a need for further investigation of the processes underlying habitat selection.

Neophobia is an important personality trait that allows animals to minimize exposure to threat. We investigated the existence of consistent individual differences in the level of neophobia in captive roe deer, Capreolus capreolus, using an experimental set-up. Our main objective was to explore the link between an individual's level of neophobia with behavioural and physiological responses measured during a stressful situation, i.e. capture and restraint, to facilitate characterization of neophobia in the wild. We found that the probability of initiating a feeding bout and the feeding efficiency over bouts both decreased in the presence of a novel object. However, there was pronounced variation in the degree to which individuals were affected by the experimental treatment. First, feeding efficiency decreased the most among individuals that reacted less markedly to an acutely stressful situation (capture). Second, latency between the first visit and the first feeding bout increased the most among individuals that had a higher concentration of fructosamine in their blood, an indicator of chronic stress. Our results indicate that individuals that are more neophobic (high latency to first feeding bout and low feeding efficiency in the presence of a novel object) are also less proactive (low behavioural response to capture, high levels of fructosamine), suggesting the existence of a behavioural syndrome. We conclude that behavioural and physiological parameters measured during capture provide reliable indicators of neophobia for roe deer, providing an exciting new avenue for the study of animal personality in the wild.

The seasonal activity of the Isabelline serotine bat Eptesicus isabellinus was studied in eight habitats of the Bou Hedma National Park, central Tunisia. From June 2010 to June 2011 two techniques, mist-netting and echolocation call recording, were implemented. This bat species was captured throughout the year but only at water bodies and particularly at Nouh basin. Captures peaked in late spring — early summer, and declined in winter. Pregnant females were captured from April to June, and lactating females in May and June. Echolocation calls were recorded throughout the year, but not every month in all habitats. Most activity was reported at water bodies and street lamps. Activity peaked in late spring and early autumn, and declined during winter period. Terminal buzzes were mainly detected at basins, peaking in late spring — early summer and early autumn. Our study provided further insights on the importance of water bodies which should draw particular attention in the management plan of the national park and in the whole country.

Partial migration, when only part of the population migrates seasonally while the other part remains resident on the shared range, is the most common form of migration in ungulates. Migration is often defined by spatial separation of seasonal ranges and consequently, classification of individuals as migrants or residents is usually only based on geographic criteria. However, the underlying mechanism for migration is hypothesized to be movement in response to spatiotemporal resource variability and thus, migrants are assumed to travel an “ecological distance” (ED) or shift their realized ecological niches. While ecological and geographic distances should be related, their relationship may depend on landscape heterogeneity. Here, we tested the utility of ecological niche theory to both classify migratory individuals and to understand the underlying ecological factors for migratory behavior. We developed an integrative approach combining measures in geographic and ecological niche space and used this to classify and explain migratory behavior of 71 annual roe deer (Capreolus capreolus) movement trajectories in five European study areas. First, to assess the utility of the ED concept for classifying migratory behavior, we tested whether roe deer sought the same ecological conditions year-round or moved to different ecological conditions by measuring the annual ED travelled and the seasonal niche overlap using multivariate statistics. Comparing methods to classify migrants and residents based on geographic and ecological niche space, we found that migratory roe deer switched between seasons both in geographic and in ecological dimensions. Second, we tested which seasonal ecological factors separated resident from migrant niches using discriminant analysis and which broad-scale determinants (e.g., spatiotemporal forage variation and population density) predicted migration probability using generalized linear models. Our results indicated that factors describing forage and topographic variability discriminated seasonal migrant from resident niches. Determinants for predicting migration probability included the temporal variation (seasonality) and also the spatial variability of forage patches. Last, we also found suggestive evidence for a positive relationship between population density and migration probability. By applying the ecological niche concept to the study of partial migration in ungulates, our work underlines that partial migration is a form of behavioral plasticity. Key words: behavioral plasticity; Capreolus capreolus; ecological distance; large herbivores; niche switching; Normalized Difference Vegetation Index; partial migration; realized niche; spatiotemporal variation; ungulates

International audience; Supplemental feeding for ungulates is a widespread practice in many human-dominated landscapes across Europe and North America, mainly intended to seasonally support populations. Surprisingly, little consideration was given so far to the effect of supplemental feeding on ungulate spatial ecology at a large scale, in management and conservation studies. Analyses of the main ecological drivers influencing the use of supplemental feeding sites by ungulates across a gradient of abiotic and biotic factors are currently lacking. We conducted a large-scale assessment of ecological and management drivers of use of feeding station sites in roe deer (Capreolus capreolus), a small cervid widely distributed across Europe that is particularly sensitive to winter severity. We tested four competing hypotheses by comparing the time spent at feeding station sites by 180 individual Global Positioning System-collared roe deer from nine populations spanning a wide latitudinal and altitudinal gradient. We found that roe deer used feeding station sites highly opportunistically in response to winter severity across its range. The harshest weather conditions at the northern range limit or the highest elevations provoked an intense use of feeding station sites, which typically peaked at the end of winter, in accordance with the adverse weather and nutritional condition hypotheses. Consistently, milder winters corresponded to a reduced and/or more homogeneous use of supplemental feeding. In general, intensively used feeding station sites heavily conditioned spatial behavior of roe deer. Importantly, biotic factors such as the presence of competitors decreased roe deer use of supplemental feeding station sites. Our results emphasize the importance of this human-induced alteration to resource distribution, especially in the context of the rapidly occurring climate change that is modifying resource availability for ungulate populations.

International audience; Parasite abundance has been shown to have major consequences for host fitness components such as survival and reproduction. However, although natal dispersal is a key life history trait, whether an individual's decision to disperse or not is influenced by the abundance of parasites it carries remains mostly unknown. Current and opposing hypotheses suggest that infected individuals should either be philopatric to avoid the energetic costs of dispersal (condition dependence) or disperse to escape from heavily parasitised habitats. From intensive monitoring of a roe deer population inhabiting a multi-use and spatially heterogeneous agricultural landscape, we evaluated the link between an individual's parasite abundance and its propensity to disperse, while accounting for confounding effects of body mass. Dispersal propensity generally decreased with both increasing nematode abundance and with decreasing body mass. Within the dispersing segment of the population, individuals with high nematode abundance left their natal home range later in the season than less parasitised deer. These results clearly show that parasite abundance is an important component of condition-dependent dispersal in large herbivores. However, unexpectedly, three individuals that were both heavily parasitised and of low body mass dispersed. We suggest that this 'leave it ' response to high parasite levels in the natal habitat could represent a last ditch attempt to improve reproductive prospects, constituting a form of emergency life history strategy.

International audience; Individuals differ in the manner that they cope with risk. When these behavioral differences are manifested in risky or challenging environments (i.e. stressful situations), they are generally interpreted within the "coping style" framework. As studying inter-individual variability in behavior is particularly challenging in the wild, we used a captive facility to explore consistency in the individual behavioral response to an acute stress in roe deer (Capreolus capreolus). Using behavioral and physiological parameters measured six times across a calendar year, we first quantified individual repeatability and, second, explored the correlations among these parameters that might indicate a coherent stress response. Finally, we analyzed the link between the stress response and individual body mass, a reliable indicator of phenotypic quality in roe deer. We found that the measured parameters were highly repeatable across seasons,-indicating that the individual stress response is consistent over time. Furthermore, there was considerable covariation among the stress response parameters, describing a proactivity-reactivity gradient at the individual level. Finally, proactive individuals had higher body mass than reactive individuals. We suggest that consistent individual differences in energy metabolism and physiology may promote consistent individual differences in behavioral traits, providing a mechanistic link between food acquisition tactics and demographic performance.

Immune gene variability influences roe deer natal dispersal