23 results on '"Niclas Sjögren"'
Search Results
2. Cortical responses to amphetamine exposure studied by pCASL MRI and pharmacokinetic/pharmacodynamic dose modeling.
- Author
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Love Engström Nordin, Tie-Qiang Li, Jacob Brogren, Patrik Johansson, Niclas Sjögren, Kristin Hannesdottir, Charlotta Björk, Märta Segerdahl, Danny J. J. Wang, and Per Julin
- Published
- 2013
- Full Text
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3. Skin innervation at different depths correlates with small fibre function but not with pain in neuropathic pain patients
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Niclas Sjögren, Roman Rukwied, Martin Schmelz, Christian Geber, C. Konrad, Frank Birklein, L. Gee, Frank L. Rice, Justus Benrath, A. Bayram, Phillip J. Albrecht, Björn Hägglöf, Marcus Schley, and M. Dusch
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Erythema ,business.industry ,Sensory system ,medicine.disease ,Anesthesiology and Pain Medicine ,medicine.anatomical_structure ,Peripheral neuropathy ,Anesthesia ,Sensory threshold ,Threshold of pain ,Neuropathic pain ,Medicine ,Axon reflex ,medicine.symptom ,business ,Sensitization - Abstract
Background: Neuropathy can lead not only to impaired function but also to sensory sensitization. We aimed to link reduced skin nerve fibre density in different levels to layer-specific functional impairment in neuropathic pain patients and tried to identify pain-specific functional and structural markers. Methods: In 12 healthy controls and 36 patients with neuropathic pain, we assessed clinical characteristics, thermal thresholds (quantitative sensory testing) and electrically induced pain and axon reflex erythema. At the most painful sites and at intra-individual control sites, skin biopsies were taken and innervation densities in the different skin layers were assessed. Moreover, neuronal calcitonin gene-related peptide staining was quantified. Results: Perception of warm, cold and heat pain and nerve fibre density were reduced in the painful areas compared with the control sites and with healthy controls. Warm and cold detection thresholds correlated best with epidermal innervation density, whereas heat and cold pain thresholds and axon reflex flare correlated best with dermal innervation density. Clinical pain ratings correlated only with epidermal nerve fibre density (r = 0.38, p < 0.05)andbetterpreservedcolddetectionthresholds(r = 0.39,p < 0.05), but not with other assessed functional and structural parameters. Conclusions: Thermal thresholds, axon reflex measurements and assessment of skin innervation density are valuable tools to characterize and quantify peripheral neuropathy and link neuronal function to different layers of the skin. The severity of small fibre neuropathy, however, did not correspond to clinical pain intensity and a specific parameter or pattern that would predict pain intensity in peripheral neuropathy could not be identified.
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- 2012
4. Validation of Decision-enabling Tools: Showing That the Model Is Useful
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Niclas Sjögren and Stig Johan Wiklund
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Validation study ,Relation (database) ,Computer science ,business.industry ,Crossover ,Public Health, Environmental and Occupational Health ,Positive control ,Pharmacology (nursing) ,Machine learning ,computer.software_genre ,Sample size determination ,Drug Guides ,Noncentral t-distribution ,Pharmacology (medical) ,Treatment effect ,Artificial intelligence ,Null hypothesis ,business ,computer - Abstract
The rapidly increasing cost to develop new drugs calls for new tools that efficiently enable the demonstration of the safety and effectiveness of a new drug. When validating such a decision-enabling tool, a traditional approach is typically to apply the tool on a positive control, known to be effective, and ascertain that a statistically significant effect is obtained. We argue, however, that the validation study should be designed to show that the tool provides a variability that is small in relation to the treatment effect, which means that the tool has the capacity of providing decision-enabling results in small-sample studies in routine use. We give details on the relevant test to perform in the validation of a decision-enabling tool and use the development of a human pharmacological model, aimed at studying neuropathic pain in 2 × 2 crossover trials, as a motivating example. We also develop power and sample size calculations, and illustrate the implications on sample size needed for a validation study. Results show that to obtain pertinent evidence that the decision-enabling tool is useful, that is, to reject the relevant null hypothesis, a substantially increased sample size would often be needed in the validation study, as compared to traditional approaches.
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- 2011
5. Comparison of Within-Subject Covariance Matrices in 2 x 2 Crossover Trials with Multivariate Response
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Niclas Sjögren and Olivier Guilbaud
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Statistics and Probability ,Multivariate statistics ,Multivariate analysis ,Multivariate analysis of variance ,Statistics ,Univariate ,Multivariate normal distribution ,Bivariate analysis ,Statistics, Probability and Uncertainty ,Covariance ,Crossover study ,Mathematics - Abstract
In a multivariate framework, it is shown how the two treatments in a 2 × 2 crossover trial with multivariate response can be compared with respect to mean vectors, i.e. fixed treatment effects, as well as within-subject covariance matrices, marginally and simultaneously. No distributional assumption is made about the between-subject variability, whereas multivariate normality is assumed for the within-subject variability. The proposed exact statistical inferences are valid even with few subjects. Data from a crossover trial with bivariate response are analysed with the proposed multivariate methods as well as with univariate methods.
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- 2004
6. P4–413: Multiple daily cognitive measurements improve accuracy and increase statistical power, allowing smaller sample sizes for PoP trials in Alzheimer's disease
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Kristin Hannesdottir, Adina Soaita, Judith Jaeger, Annika Zettergren, and Niclas Sjögren
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Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Epidemiology ,Sample size determination ,Computer science ,Health Policy ,Statistics ,Cognition ,Neurology (clinical) ,Disease ,Geriatrics and Gerontology ,Statistical power - Published
- 2013
7. P2–283: Psychometric features of the ADAS‐Cog: Identifying a potential cognition endpoint for prodromal Alzheimer's disease
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Tina Olsson, Judith Jaeger, Pär Karlsson, Niclas Sjögren, Ingrid Nordgren, Anna-Karin Berger, Kristin Hannesdottir, and Tim Ashwood
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medicine.medical_specialty ,Epidemiology ,Health Policy ,Cognition ,Disease ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Adas cog ,medicine ,Neurology (clinical) ,Geriatrics and Gerontology ,Psychiatry ,Psychology ,Clinical psychology - Published
- 2013
8. Psychometric evaluation of ADAS-Cog and NTB for measuring drug response
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Pär Karlsson, Niclas Sjögren, F. Miller, Märta Segerdahl, T. von Rosen, Kristin Hannesdottir, Judith Jaeger, A. Karin, and Peter Annas
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Male ,medicine.medical_specialty ,Psychometrics ,Neuropsychological Tests ,Cognition ,Piperidines ,Alzheimer Disease ,Drug response ,medicine ,Humans ,Donepezil ,Psychiatry ,Nootropic Agents ,Aged ,Randomized Controlled Trials as Topic ,Aged, 80 and over ,General Medicine ,Middle Aged ,Cognitive test ,Neurology ,Adas cog ,Indans ,Female ,Neurology (clinical) ,Disease assessment ,Psychology ,Clinical psychology - Abstract
To conduct a psychometric analysis to determine the adequacy of instruments that measure cognition in Alzheimer's disease trials.Both the Alzheimer's Disease Assessment Scale - Cognition (ADAS-Cog) and the Neuropsychological Test Battery (NTB) are validated outcome measures for clinical trials in Alzheimer's disease and are approved also for regulatory purposes. However, it is not clear how comparable they are in measuring cognitive function. In fact, many recent trials in Alzheimer's disease patients have failed and it has been questioned if ADAS-Cog still is a sensitive measure.The present paper examines the psychometric properties of ADAS-Cog and NTB, based on a post hoc analysis of data from a clinical trial (NCT01024660), which was conducted by AstraZeneca, in mild-to-moderate Alzheimer's disease (AD) patients, with a Mini Mental State Examination (MMSE) Total score 16-24. Acceptability, reliability, different types of validity and ability to detect change were assessed using relevant statistical methods. Total scores of both tests, as well as separate domains of both tests, including the Wechsler Memory Scale (WMS), Rey Auditory Verbal Learning Test (RAVLT) and Delis-Kaplan Executive Function System (D-KEFS) Verbal Fluency Condition, were analyzed.Overall, NTB performed well, with acceptable reliability and ability to detect change, while ADAS-Cog had insufficient psychometric properties, including ceiling effects in 8 out of a total of 11 ADAS-Cog items in mild AD patients, as well as low test-retest reliability in some of the items.Based on a direct comparison on the same patient sample, we see advantages of the NTB compared with the ADAS-Cog for the evaluation of cognitive function in the population of mild-to-moderate AD patients. The results suggest that not all of ADAS-Cog items are relevant for both mild and moderate AD population.This validation study demonstrates satisfactory psychometric properties of the NTB, while ADAS-Cog was found to be psychometrically inadequate.
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- 2013
9. Cortical responses to amphetamine exposure studied by pCASL MRI and pharmacokinetic/pharmacodynamic dose modeling
- Author
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Per Julin, Love Engström Nordin, Tie-Qiang Li, Niclas Sjögren, Kristin Hannesdottir, Märta Segerdahl, Patrik Johansson, Danny J.J. Wang, Jacob Brogren, and Charlotta Björk
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Adult ,Male ,Cognitive Neuroscience ,Insular cortex ,Young Adult ,Double-Blind Method ,Image Interpretation, Computer-Assisted ,medicine ,Humans ,Cerebral perfusion pressure ,Amphetamine ,Cerebral Cortex ,medicine.diagnostic_test ,business.industry ,Magnetic resonance imaging ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Neurology ,Cerebral blood flow ,Cerebral cortex ,Pharmacodynamics ,Anesthesia ,Cerebrovascular Circulation ,Central Nervous System Stimulants ,Spin Labels ,Nuclear medicine ,business ,Perfusion ,medicine.drug - Abstract
Introduction Perfusion measurement by arterial spin labeling (ASL) techniques is well suited for pharmaceutical magnetic resonance imaging (phMRI) studies to investigate how drugs change the cerebral perfusion status and further, neuronal activity. Materials and method Twelve healthy normal male volunteers participated in the study which was based on a double blinded design. Six subjects were randomly selected to receive a single oral dose of 20 mg d -amphetamine and six were given placebo. Perfusion measurements by pseudo-continuous ASL (pCASL) technique were repeatedly performed at 10 different time points with a 3T clinical MRI scanner during a 10 hour period after dose together with physiologic data and blood sample collections. The dynamic changes in cerebral perfusion in response to the plasma concentration variations of d -amphetamine were analyzed at voxel-level and for regions of interest. Results Compared to the placebo group a 20% reduction in cerebral blood flow (CBF) was observed in gray matter for the subjects that received d -amphetamine. The most significant reduction of regional CBF (rCBF) was detected in the basal ganglia, frontal region and insular cortex using voxel based analysis. A relation between d -amphetamine exposure and CBF response was found using PK/PD modeling, which predicted on average a 15% decrease of the CBF in gray matter at a plasma concentration of 30 ng/ml. Conclusion In this study we have demonstrated that repeated perfusion measurements by pCASL technique was sufficiently robust to differentiate the neurological response between the groups that received d -amphetamine and placebo. Quantitative and repetitive CBF measurements can be used for PK/PD modeling of CNS drug responses in humans.
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- 2012
10. Tesaglitazar, a dual PPAR-α/γ agonist, hamster carcinogenicity, investigative animal and clinical studies
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Jonathan Tugwood, Niclas Sjögren, Inger Skånberg, Hanna Lundgren, Per Lindblom, Rolf Westerberg, Anna-Lena Berg, Heike Hellmold, Peter Öhman, Hui Zhang, John Evans, Bo Blomgren, and Maritha Marcusson-Ståhl
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Alkanesulfonates ,Male ,Vascular Endothelial Growth Factor A ,medicine.medical_specialty ,Tesaglitazar ,Carcinogenicity Tests ,Hemangiosarcoma ,Hamster ,Biology ,Toxicology ,Statistics, Nonparametric ,Pathology and Forensic Medicine ,Muscle hypertrophy ,chemistry.chemical_compound ,Liver Neoplasms, Experimental ,In vivo ,Internal medicine ,Cricetinae ,medicine ,Human Umbilical Vein Endothelial Cells ,Animals ,Humans ,PPAR alpha ,Receptor ,Molecular Biology ,Cell Proliferation ,Phenylpropionates ,Gene Expression Profiling ,Cell Biology ,medicine.disease ,Immunohistochemistry ,Vascular endothelial growth factor ,PPAR gamma ,Endocrinology ,chemistry ,Liver ,Hepatocellular carcinoma ,Area Under Curve ,Toxicity ,Female ,Hemangioma - Abstract
Tesaglitazar was developed as a dual peroxisome proliferator–activated receptor (PPARα/γ). To support the clinical program, a hamster carcinogenicity study was performed. The only neoplastic findings possibly related to treatment with tesaglitazar were low incidences of hemangioma and hemangiosarcoma in the liver of male animals. A high-power, two-year investigative study with interim necropsies was performed to further elucidate these findings. Treatment with tesaglitazar resulted in changes typical for exaggerated PPARα pharmacology in rodents, such as hepatocellular hypertrophy and hepatocellular carcinoma, but not an increased frequency of hemangiosarcomas. At the highest dose level, there was an increased incidence of sinusoidal dilatation and hemangiomas. No increased endothelial cell (EC) proliferation was detected in vivo, which was confirmed by in vitro administration to ECs. Immunohistochemistry and gene expression analyses indicated increased cellular stress and vascular endothelial growth factor (VEGF) expression in the liver, which may have contributed to the sinusoidal dilatation. A two-fold increase in the level of circulating VEGF was detected in the hamster at all dose levels, whereas no effect on VEGF was observed in patients treated with tesaglitazar. In conclusion, investigations have demonstrated that tesaglitazar does not produce hemangiosarcomas in hamster despite a slight effect on vascular morphology in the liver.
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- 2011
11. P4‐421: Does repeated daily testing improve measurement sensitivity to the cognitive effects of donepezil in mild to moderate Alzheimer's disease?
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Kristin Hannesdottir, Annika Zettergren, Hans-Goran Hardemark, Judith Jaeger, and Niclas Sjögren
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medicine.medical_specialty ,Epidemiology ,business.industry ,Health Policy ,Cognition ,Disease ,Audiology ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,medicine ,Neurology (clinical) ,Sensitivity (control systems) ,Geriatrics and Gerontology ,Donepezil ,business ,medicine.drug - Published
- 2011
12. P1‐352: Cortical atrophy rates in Alzheimer's disease and mild cognitive impairment from the ADNI study
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Niclas Sjögren, Andrew Simmons, Simon Fristed Eskildsen, Lars-Olof Wahlund, Eric Westman, Per Julin, Simon Lovestone, Sebastian Muehlboeck, Femida Gwadry-Sridhar, and Christian Spenger
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Epidemiology ,business.industry ,Health Policy ,Disease ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Medicine ,Neurology (clinical) ,Geriatrics and Gerontology ,Cognitive impairment ,business ,Neuroscience ,Cortical atrophy - Published
- 2011
13. P4‐437: Repeated baseline cognitive measurements in mild to moderate AD patients reveal significant day‐to‐day variation
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Niclas Sjögren, Annica Zettergren, Kristin Hannesdottir, Hans-Goran Hardemark, and Judith Jaeger
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Genetically modified mouse ,Epidemiology ,business.industry ,animal diseases ,Health Policy ,medicine.medical_treatment ,chemical and pharmacologic phenomena ,Immunotherapy ,Endocytosis ,complex mixtures ,In vitro ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Immunization ,mental disorders ,Immunology ,Medicine ,Secretion ,Neurology (clinical) ,Geriatrics and Gerontology ,Day to day ,business ,Transforming growth factor - Abstract
immunogens in the culture media, DCs from As immunogens-immunized APP/PS1 transgenic mice showed stronger migration, endocytosis and higherMHC II expression than DCs from unimmunizedmice. Further, short As immunogens decreased the secretion of IL-12/IL-10, IL-6/IL-1s and increased the production of TGF-s by DCs from immunized APP/PS1 transgenic mice, but not those from unimmunized mice. Our data indicated that DCs from APP/PS1 transgenic mice were in low-response state to short As immunogens in vitro. Furthermore, immunization with short As immunogens in vivowaked up this abnormal state.Conclusions:Therefore, it is necessary to take abnormal DCs role into consideration in As immunotherapy.
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- 2011
14. An alternative linear trend analysis for assessing the results of the mouse lymphoma assay
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George Bolcsfoldi, Niclas Sjögren, and Sai-Mei Hou
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Lymphoma ,Epidemiology ,Health, Toxicology and Mutagenesis ,Mouse Lymphoma ,Linear model ,Contrast (statistics) ,Replicate ,Thymidine Kinase ,Trend analysis ,Mice ,Test case ,Statistics ,Linear regression ,Linear Models ,Animals ,Biological Assay ,Genetics (clinical) ,Linear trend ,Mathematics - Abstract
As recommended by the mouse lymphoma assay (MLA) Workgroup of the International Workshop on Genotoxicity Testing (Aberdeen, 2003), a trend test is critical if an induced mutant frequency (MF) of at least 126 × 10(-6) (global evaluation factor, GEF) is achieved at one or more test concentrations. Only those responses that both achieve the GEF and a significant trend are biologically relevant. While no specific trend test was recommended by the Workshop, a trend test was recommended by the UK Environmental Mutagen Society (1989). The test uses MF (untransformed) averaged over replicate cultures following a consistency test (against a historical heterogeneity factor) in a weighted linear regression with chi-square (χ(2)) test for slope and returns significant results in virtually all cases that are positive for the GEF, including those with no apparent dose-response. We have explored an alternative method where the natural logarithm of MF and its variance are estimated for each replicate culture separately and used in a weighted ordinary linear regression with t-test for slope. Using test cases positive for the GEF, the P-value from this model is shown to be sensitive to changes in the number of replicates, the shape and magnitude of mutant induction, in contrast to the χ(2) model. Cases with no apparent dose-response and thereby questionable biological significance are tested negative by our method but positive by the χ(2) model. Our method is thus straight-forward and provides a meaningful complement to the GEF in assessing the biological significance of the MLA results.
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- 2011
15. Structural and functional differences between neuropathy with and without pain?
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Martin Schmelz, Johanna von Kieseritzky, Phil Albrecht, Maija Kalliomäki, Frank L. Rice, Björn Hägglöf, Lucy Gee, Monica Wiig, Niclas Sjögren, Torsten Gordh, Rolf Karlsten, and Roland Schmidt
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Adult ,Male ,Pain Threshold ,Polyneuropathies ,Nerve Fibers ,Developmental Neuroscience ,Threshold of pain ,Medicine ,Humans ,Pain Measurement ,Skin ,Referred pain ,integumentary system ,business.industry ,Cutaneous nerve ,Chronic pain ,Nerve injury ,Middle Aged ,medicine.disease ,Electric Stimulation ,Neurology ,Anesthesia ,Neuropathic pain ,Chronic Disease ,Neuralgia ,Axon reflex ,Female ,medicine.symptom ,business - Abstract
We aimed to find functional and structural differences in neuropathy between patients with and without chronic pain following nerve injury. We included 30 patients requiring hand surgery after a trauma, with 21 reporting chronic pain for more than one year after the injury, while 9 did not suffer from injury-related chronic pain. We assessed mechanical sensitivity, thermal thresholds, electrically induced pain and axon reflex erythema and cutaneous nerve fiber density in skin biopsies of the injured site and its contralateral control. Epidermal fiber density of the injured site was reduced similarly in both patient groups. Thresholds for cold and heat pain and axon reflex areas were reduced in the injured site, but did not differ between the patient groups. Only warmth thresholds were better preserved in the pain patients (35.2 vs. 38.4°C). Neuronal CGRP staining did not reveal any difference between pain and non-pain patients. Epidermal innervation density correlated best to warmth detection thresholds and deeper dermal innervation density to the area of the axon reflex erythema. No specific pattern of subjective, functional or structural parameters was detected that would separate the neuropathy patients into pain and non-pain patients. Specific staining of additional targets may help to improve our mechanistic understanding of pain development.
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- 2011
16. P1‐417: Cortical atrophy rates in Alzheimer's patients and subjects with mild cognitive impairment from the AddNeuroMed data collection
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Christian Spenger, Patrizia Mecocci, Niclas Sjögren, Sebastian Muehlboeck, Bruno Vellas, Hilkka Soininen, Per Julin, Eric Westman, Magda Tsolaki, Simon Fristed Eskildsen, Femida Gwadry-Sridhar, Simon Lovestone, Andrew Simmons, Lars-Olof Wahlund, and Iwona Kłoszewska
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medicine.medical_specialty ,Data collection ,Epidemiology ,business.industry ,Health Policy ,Audiology ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Medicine ,Neurology (clinical) ,Geriatrics and Gerontology ,business ,Cognitive impairment ,Cortical atrophy - Published
- 2010
17. IC‐P‐137: Combining Two Large MRI Data Sets (AddNeuroMed and ADNI) Using Multivariate Data Analysis to Distinguish between Patients with Alzheimer's Disease and Healthy Controls
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Eric Westman, Andrew Simmons, J.-Sebastian Muehlboeck, Femida Gwadry-Sridhar, Simon Fristed Eskildsen, Per Julin, Niclas Sjögren, D. Louis Collins, Alan Evans, Patrizia Mecocci, Bruno Vellas, Magda Tsolaki, Iwona Kłoszewska, Hilkka Soininen, Michael Weiner, S. Lovestone, Christian Spenger, Lars-Olof Wahlund, and null AddNeuroMed consortium
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Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Multivariate analysis ,Developmental Neuroscience ,Epidemiology ,business.industry ,Health Policy ,Medicine ,Neurology (clinical) ,Disease ,Geriatrics and Gerontology ,business ,Cartography - Published
- 2010
18. Cluster Analysis and Decision Trees of MR Imaging in Patients Suffering Alzheimer’s
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Christian Spenger, Simon Lovestone, Sebastian Muehlboeck, Catherine Tunnard, Alan C. Evans, Bruno Vellas, Michael Bauer, Ali K. Hamou, Yi Zhang, Lars-Olof Wahlund, Andrew Simmons, Benoit Lewden, Femida Gwadry-Sridhar, Per Julin, Patrizia Mecozzi, Iwona Kłoszewska, Hilkka Soininen, Magda Tsolaki, and Niclas Sjögren
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business.industry ,Computer science ,Decision tree learning ,Decision tree ,Disease ,Machine learning ,computer.software_genre ,Disease cluster ,Mr imaging ,In patient ,Artificial intelligence ,business ,Cognitive impairment ,Cluster analysis ,computer - Abstract
The use of novel analytical techniques (such as data clustering and decision trees) that can model and predict patient disease outcomes has great potential for assessing disease process and progression in Alzheimer’s disease and mild cognitive impairment. For this study, 43 different variables (generated from image data, demographics and clinical data) have been compiled and analyzed using a modified clustering algorithm. Our aim was to determine the influence of these variables on the incidence of Alzheimer’s and mild cognitive impairment. Furthermore, we used a decision tree algorithm to model the level of “importance” of variants influencing this decision.
- Published
- 2010
19. Predictive models of hepatotoxicity using gene expression data from primary rat hepatocytes
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A. H. Salter, L. Hultin-Rosenberg, Jonathan Tugwood, Niclas Sjögren, R. D. J. Huby, S. Jagannathan, K. C. Nilsson, and S. A. Matis
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Pharmacology ,Principal Component Analysis ,Primary (chemistry) ,Health, Toxicology and Mutagenesis ,Predictive capability ,Gene Expression ,General Medicine ,Computational biology ,Biology ,Toxicology ,Bioinformatics ,Biochemistry ,Models, Biological ,Toxicogenetics ,Rats ,In vitro system ,Gene expression ,Hepatocytes ,Animals ,Cluster Analysis ,DNA microarray ,Least-Squares Analysis ,Potential toxicity - Abstract
With the aim of evaluating the usefulness of an in vitro system for assessing the potential hepatotoxicity of compounds, the paper describes several methods of obtaining mathematical models for the prediction of compound-induced toxicity in vivo. These models are based on data derived from treating rat primary hepatocytes with various compounds, and thereafter using microarrays to obtain gene expression 'profiles' for each compound. Predictive models were constructed so as to reduce the number of 'probesets' (genes) required, and subjected to rigorous cross-validation. Since there are a number of possible approaches to derive predictive models, several distinct modelling strategies were applied to the same data set, and the outcomes were compared and contrasted. While all the strategies tested showed significant predictive capability, it was interesting to note that the different approaches generated models based on widely disparate probesets. This implies that while these models may be useful in ascribing relative potential toxicity to compounds, they are unlikely to provide significant information on underlying toxicity mechanisms. Improved predictivity will be obtained through the generation of more comprehensive gene expression databases, covering more 'toxicity space', and by the development of models that maximize the observation, and combination, of individual differences between compounds.
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- 2006
20. Effective visualization of integrated knowledge and data to enable informed decisions in drug development and translational medicine
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Lena Brynne, Anders Bresell, and Niclas Sjögren
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Informatics ,Knowledge management ,Decision Making ,Preclinical data ,Drug Evaluation, Preclinical ,Drug development ,Bioinformatics ,computer.software_genre ,Competitive advantage ,General Biochemistry, Genetics and Molecular Biology ,Translational Research, Biomedical ,Alzheimer Disease ,Medicine ,Humans ,Visualization ,Medicine(all) ,business.industry ,Biochemistry, Genetics and Molecular Biology(all) ,Translational medicine ,Methodology ,General Medicine ,Data science ,Variety (cybernetics) ,Knowledge ,Treatment Outcome ,Information model ,Drug Design ,Clinical data ,Data integration ,business ,computer ,Decision-making - Abstract
Integrative understanding of preclinical and clinical data is imperative to enable informed decisions and reduce the attrition rate during drug development. The volume and variety of data generated during drug development have increased tremendously. A new information model and visualization tool was developed to effectively utilize all available data and current knowledge. The Knowledge Plot integrates preclinical, clinical, efficacy and safety data by adding two concepts: knowledge from the different disciplines and protein binding. Internal and public available data were gathered and processed to allow flexible and interactive visualizations. The exposure was expressed as the unbound concentration of the compound and the treatment effect was normalized and scaled by including expert opinion on what a biologically meaningful treatment effect would be. The Knowledge Plot has been applied both retrospectively and prospectively in project teams in a number of different therapeutic areas, resulting in closer collaboration between multiple disciplines discussing both preclinical and clinical data. The Plot allows head to head comparisons of compounds and was used to support Candidate Drug selections and differentiation from comparators and competitors, back translation of clinical data, understanding the predictability of preclinical models and assays, reviewing drift in primary endpoints over the years, and evaluate or benchmark compounds in due diligence comparing multiple attributes. The Knowledge Plot concept allows flexible integration and visualization of relevant data for interpretation in order to enable scientific and informed decision-making in various stages of drug development. The concept can be used for communication, decision-making, knowledge management, and as a forward and back translational tool, that will result in an improved understanding of the competitive edge for a particular project or disease area portfolio. In addition, it also builds up a knowledge and translational continuum, which in turn will reduce the attrition rate and costs of clinical development by identifying poor candidates early.
- Published
- 2013
21. I20 What makes a chronic pain patient?
- Author
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Frank L. Rice, Roland Schmidt, B. Hägglöof, Rolf Karlsten, J. von Kieseritzky, Torsten Gordh, Monica Wiig, Niclas Sjögren, Martin Schmelz, and Maija Kalliomäki
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Referred pain ,business.industry ,Chronic pain ,medicine.disease ,Anesthesiology and Pain Medicine ,Allodynia ,Opioid ,Anesthesia ,Hyperalgesia ,medicine ,Ketamine ,Neurology (clinical) ,Tramadol ,medicine.symptom ,business ,medicine.drug ,Buprenorphine - Abstract
ketamine, ketorolac nor tramadol altered tolerance time but in buprenorphine subjects, morphine with either ketamine or tramadol increased tolerance times by 22 and 40%, respectively. Conclusions: Hyperalgesia can be measured by the cold pressor test in patients taking opioids for a variety of indications. Chronic opioid administration not only causes tolerance but also increases pain sensitivity leading to opioid-induced hyperalgesia without allodynia. The mechanism(s) are poorly understood, appear not to be opioid drug or dosing regimen specific but may involve immune system modulators. Novel therapeutic strategies are therefore required for the management of persistent pain in patients receiving opioids that can attenuate hyperalgesia without causing additional or new adverse effects. The future will likely see combinations of analgesics and antihyperalgesics. Acknowledgement: the research was supported by grants from NIH (USA) and NHMRC(Australia).
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- 2009
22. 292 REPRODUCIBILITY AND VARIABILITY OF THE HUMAN EXPERIMENTAL PAIN MODEL OF CONTINUOUS CUTANEOUS ELECTRICAL STIMULATION
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Björn Hägglöf, B. Jonzon, Niclas Sjögren, Märta Segerdahl, Alf Sollevi, Martin Schmelz, and M. Carlsson
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medicine.medical_specialty ,Reproducibility ,Anesthesiology and Pain Medicine ,business.industry ,Anesthesia ,medicine ,Stimulation ,business ,Surgery - Published
- 2006
23. Tesaglitazar, a PPAR{alpha}/{gamma} Agonist, Induces Interstitial Mesenchymal Cell DNA Synthesis and Fibrosarcomas in Subcutaneous Tissues in Rats.
- Author
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Heike Hellmold, Hui Zhang, Ulf Andersson, Bo Blomgren, Tom Holland, Anna-Lena Berg, Marie Elebring, Niclas Sjögren, Krister Bamberg, Björn Dahl, Rolf Westerberg, Birgitta Dillner, Jonathan Tugwood, Ruth Roberts, Erik Lundholm, German Camejo, Inger Skånberg, and John Evans
- Subjects
TUMORS ,DNA ,IMMUNOHISTOCHEMISTRY ,TISSUES - Abstract
The development of the dual peroxisome proliferator–activated receptor (PPAR) α/γ agonist tesaglitazar as an oral antidiabetic was recently discontinued. Here we present tumor data from a 2-year carcinogenicity study in rats given 0.3, 1, 3, and 10 μmol/kg tesaglitazar is presented with focus on the findings of subcutaneous fibrosarcomas. To investigate the mechanism for induction of fibrosarcomas, replicative DNA synthesis (immunohistochemical detection of BrdU-labeled cells) and expression of PPARγ (immunohistochemistry and reverse transcription–polymerase chain reaction) in subcutaneous adipose tissues was assessed in rats administered 1 or 10 μmol/kg for 2 weeks or 3 months. Poorly differentiated subcutaneous mesenchymal sarcomas with a predominant spindle cell appearance occurred at the highest dose level of 10 μmol/kg in both sexes, and these tumors were diagnosed as fibrosarcomas. The 10-μmol/kg dose was at or above the maximum tolerated dose and caused considerable cardiovascular mortality. Tesaglitazar stimulated DNA synthesis mainly in subcutaneous interstitial mesenchymal cells. The percentage of BrdU-labeled interstitial cells was increased at 1 and 10 μmol/kg after 2 weeks. The increase in DNA synthesis was still significant at the end of the 12-week treatment at 10 μmol/kg, the dose producing fibrosarcoma. However, at 1 μmol/kg, a dose below the no-observed-effect level for fibrosarcoma, the level of DNA synthesis was similar to control levels at 12 weeks. Immunohistochemical analyses showed no detectable PPARγ protein in the majority of BrdU-labeled interstitial mesenchymal cells in white and brown fat. This indicates that stimulation of DNA synthesis is not mediated via direct activation of PPARγ in these cells. The results suggest that the induction of rat fibrosarcoma by tesaglitazar, at exposures 100-fold above the human therapeutic exposure, may involve proliferation of undifferentiated mesenchymal cells in subcutaneous tissues. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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