1. ISARIC-COVID-19 dataset: A Prospective, Standardized, Global Dataset of Patients Hospitalized with COVID-19
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Garcia-Gallo, E, Merson, L, Kennon, K, Kelly, S, Citarella, B, Fryer, D, Shrapnel, S, Lee, J, Duque, S, Fuentes, Y, Balan, V, Smith, S, Wei, J, Goncalves, B, Russell, C, Sigfrid, L, Dagens, A, Olliaro, P, Baruch, J, Kartsonaki, C, Dunning, J, Rojek, A, Rashan, A, Beane, A, Murthy, S, Reyes, L, Abbas, A, Abdukahil, S, Abdulkadir, N, Abe, R, Abel, L, Absil, L, Jabal, K, Zayyad, H, Acharya, S, Acker, A, Adachi, S, Adam, E, Adriano, E, Adriao, D, Ageel, S, Ahmed, S, Aiello, M, Ainscough, K, Airlangga, E, Aisa, T, Hssain, A, Tamlihat, Y, Akimoto, T, Akmal, E, Qasim, E, Al-Dabbous, T, Al-Fares, A, Alalqam, R, Alberti, A, Alegesan, S, Alegre, C, Alessi, M, Alex, B, Alexandre, K, Alfoudri, H, Ali, A, Ali, I, Shah, N, Sheikh, N, Alidjnou, K, Aliudin, J, Alkhafajee, Q, Allavena, C, Allou, N, Altaf, A, Alves, J, Alves, R, Amaral, M, Amira, N, Ammerlaan, H, Ampaw, P, Andini, R, Andrejak, C, Angheben, A, Angoulvant, F, Ansart, S, Anthonidass, S, Antonelli, M, Antunes de Brito, C, Anwar, K, Apriyana, A, Arabi, Y, Aragao, I, Arancibia, F, Araujo, C, Arcadipane, A, Archambault, P, Arenz, L, Arlet, J, Arnold-Day, C, Aroca, A, Arora, L, Arora, R, Artaud-Macari, E, Aryal, D, Asaki, M, Asensio, A, Ashley, E, Ashraf, M, Asif, N, Asim, M, Assie, J, Asyraf, A, Atique, A, Lakshan Attanyake, A, Auchabie, J, Aumaitre, H, Auvet, A, Axelsen, E, Azemar, L, Azoulay, C, Bach, B, Bachelet, D, Badr, C, Baevre-Jensen, R, Baig, N, Baillie, J, Baird, J, Bak, E, Bakakos, A, Bakar, N, Bal, A, Balakrishnan, M, Bani-Sadr, F, Barbalho, R, Barbosa, N, Barclay, W, Barnett, S, Barnikel, M, Barrasa, H, Barrelet, A, Barrigoto, C, Bartoli, M, Bartone, C, Bashir, M, Basmaci, R, Basri, M, Battaglini, D, Bauer, J, Bautista Rincon, D, Dow, D, Bedossa, A, Bee, K, Begum, H, Behilill, S, Beiruti, K, Beishuizen, A, Beljantsev, A, Bellemare, D, Beltrame, A, Beltrao, B, Beluze, M, Benech, N, Benjiman, L, Benkerrou, D, Bennett, S, Bento, L, Berdal, J, Bergeaud, D, Bergin, H, Sobrino, J, Bertoli, G, Bertolino, L, Bessis, S, Betz, A, Bevilcaqua, S, Bezulier, K, Bhatt, A, Bhavsar, K, Bianchi, I, Bianco, C, Bidin, F, Singh, M, Humaid, F, Kamarudin, M, Bissuel, F, Biston, P, Bitker, L, Bitton, J, Blanco-Schweizer, P, Blier, C, Bloos, F, Blot, M, Blumberg, L, Boccia, F, Bodenes, L, Bogaarts, A, Bogaert, D, Boivin, A, Bolze, P, Bompart, F, Bonelli, P, Bonfasius, A, Borges, D, Borie, R, Bosse, H, Botelho-Nevers, E, Bouadma, L, Bouchaud, O, Bouchez, S, Bouhmani, D, Bouhour, D, Bouiller, K, Bouillet, L, Bouisse, C, Bounphiengsy, T, Bountthasavong, L, Boureau, A, Bourke, J, Bouscambert, M, Bousquet, A, Bouziotis, J, Boxma, B, Boyer-Besseyre, M, Boylan, M, Bozza, F, Braconnier, A, Braga, C, Brandenburger, T, Monteiro, F, Brazzi, L, Breen, D, Breen, P, Brickell, K, Browne, A, Browne, S, Brozzi, N, Brunvoll, S, Brusse-Keizer, M, Buchtele, N, Buesaquillo, C, Bugaeva, P, Buisson, M, Buonsenso, D, Burhan, E, Burrell, A, Bustos, I, Butnaru, D, Cabie, A, Cabral, S, Caceres, E, Cadoz, C, Callahan, M, Calligy, K, Calvache, J, Caminiti, C, Camoes, J, Campana, V, Campbell, P, Campisi, J, Canepa, C, Cantero, M, Caraux-Paz, P, Carcel, S, Cardellino, C, Cardoso, F, Cardoso, N, Cardoso, S, Carelli, S, Carlacci, F, Carlier, N, Carmoi, T, Carney, G, Carqueja, I, Carret, M, Carrier, F, Carroll, I, Carson, G, Carvalho, L, Casanova, M, Cascao, M, Casey, S, Casimiro, J, Cassandra, B, Castaneda, S, Castanheira, N, Castor-Alexandre, G, Castrillon, H, Castro, I, Catarino, A, Catherine, F, Cattaneo, P, Cavalin, R, Cavalli, G, Cavayas, A, Ceccato, A, Cervantes-Gonzalez, M, Chair, A, Chakveatze, C, Chan, A, Chand, M, Auger, C, Chapplain, J, Chas, J, Chatterjee, A, Chaudry, M, Iniguez, J, Chen, A, Chen, Y, Cheng, M, Cheret, A, Chetta, A, Chiarabini, T, Chica, J, Chidambaram, S, Tho, L, Chirouze, C, Chiumello, D, Cho, H, Cho, S, Cholley, B, Chommanam, D, Chopin, M, Chow, T, Chow, Y, Christy, N, Chua, H, Chua, J, Cidade, J, Herreros, J, Ciullo, A, Clarke, E, Clarke, J, Granado, R, Clohisey, S, Cobb, P, Codan, C, Cody, C, Coelho, A, Coles, M, Colin, G, Collins, M, Colombo, S, Combs, P, Connor, M, Conrad, A, Contreras, S, Conway, E, Cooke, G, Copland, M, Cordel, H, Corley, A, Cornelis, S, Cornet, A, Corpuz, A, Cortegiani, A, Corvaisier, G, Costigan, E, Couffignal, C, Couffin-Cadiergues, S, Courtois, R, Cousse, S, Cregan, R, D'Orleans, C, Croonen, S, Crowl, G, Crump, J, Cruz, C, Berm, J, Rojo, J, Csete, M, Cucino, A, Cullen, A, Cummings, M, Curley, G, Curlier, E, Curran, C, Custodio, P, D'Amico, F, D'Aragon, F, D'Ortenzio, E, da Silva Filipe, A, Da Silveira, C, Dabaliz, A, Dahl, J, Dahly, D, Dalton, H, Dalton, J, Daly, S, Daneman, N, Daniel, C, Dankwa, E, Dantas, J, de Boer, M, de Loughry, G, de Mendoza, D, De Montmollin, E, de Oliveira Franca, R, de Pinho Oliveira, A, De Rosa, R, De Rose, C, de Silva, T, de Vries, P, Deacon, J, Dean, D, Debard, A, Debenedictis, B, Debray, M, Decastro, N, Dechert, W, Deconninck, L, Decours, R, Defous, E, Delacroix, I, Delaveuve, E, Delavigne, K, Delfos, N, Deligiannis, I, Dell'Amore, A, Delmas, C, Delobel, P, Delsing, C, Demonchy, E, Denis, E, Deplanque, D, Depuydt, P, Desai, M, Descamps, D, Desvallees, M, Dewayanti, S, Dhanger, P, Diallo, A, Diamantis, S, Dias, A, Diaz, J, Diaz, P, Diaz, R, Didier, K, Diehl, J, Dieperink, W, Dimet, J, Dinot, V, Diop, F, Diouf, A, Dishon, Y, Djossou, F, Docherty, A, Doherty, H, Dondorp, A, Dong, A, Donnelly, C, Donnelly, M, Donohue, C, Donohue, S, Donohue, Y, Doran, P, Dorival, C, Douangdala, P, Douglas, J, Douma, R, Dournon, N, Downer, T, Downey, J, Downing, M, Drake, T, Driscoll, A, Dror, A, Dryden, M, Fonseca, C, Dubee, V, Dubos, F, Dubot-Peres, A, Ducancelle, A, Duculan, T, Dudman, S, Duggal, A, Dunand, P, Duplaix, M, Durante-Mangoni, E, Durham, L, Dussol, B, Duthoit, J, Duval, X, Dyrhol-Riise, A, Ean, S, Echeverria-Villalobos, M, Economopoulos, G, Edelstein, M, Egan, S, Eggesbo, L, Eira, C, Sanharawi, M, Elapavaluru, S, Elharrar, B, Ellerbroek, J, Ellingjord-Dale, M, Eloy, P, Elshazly, T, Elyazar, I, Enderle, I, Endo, T, Eng, C, Engelmann, I, Enouf, V, Epaulard, O, Escher, M, Esperatti, M, Esperou, H, Esposito-Farese, M, Estevao, J, Etienne, M, Ettalhaoui, N, Everding, A, Evers, M, Fabre, I, Fabre, M, Faheem, A, Fahy, A, Fairfield, C, Fakar, Z, Fareed, K, Faria, P, Farooq, A, Fateena, H, Fatoni, A, Faure, K, Favory, R, Fayed, M, Feely, N, Feeney, L, Fernandes, J, Fernandes, M, Fernandes, S, Ferrand, F, Devouge, E, Ferrao, J, Ferrari, C, Ferraz, M, Ferreira, B, Ferreira, I, Ferreira, S, Ferrer-Roca, R, Ferriere, N, Ficko, C, Figueiredo-Mello, C, Finlayson, W, Fiorda, J, Flament, T, Flateau, C, Fletcher, T, Florio, L, Flynn, B, Flynn, D, Fogliazza, F, Foley, C, Foley, J, Fomin, V, Fonseca, T, Fontela, P, Forsyth, S, Foster, D, Foti, G, Fourn, E, Fowler, R, Fraher, M, Franch-Llasat, D, Fraser, C, Fraser, J, Freire, M, Ribeiro, A, French, C, Friedrich, C, Fritz, R, Fry, S, Fuentes, N, Fukuda, M, Argin, G, Gaborieau, V, Gaci, R, Gagliardi, M, Gagnard, J, Gagne, N, Gagneux-Brunon, A, Gaiao, S, Skeie, L, Gallagher, P, Curto, E, Gamble, C, Gani, Y, Garan, A, Garcia, R, Barrio, N, Garcia-Diaz, J, Garimella, N, Garofalo, F, Garot, D, Garrait, V, Gauli, B, Gault, N, Gavin, A, Gavrylov, A, Gaymard, A, Gebauer, J, Geraud, E, Morlaes, L, Germano, N, Ghisulal, P, Ghosn, J, Giani, M, Giaquinto, C, Gibson, J, Gigante, T, Gilg, M, Gilroy, E, Giordano, G, Girvan, M, Gissot, V, Gitaka, J, Giwangkancana, G, Glikman, D, Glybochko, P, Gnall, E, Goco, G, Goehringer, F, Goepel, S, Goffard, J, Goh, J, Golob, J, Gomes, R, Gomez, K, Gomez-Junyent, J, Gominet, M, Gonzalez, A, Gordon, P, Gorelik, Y, Gorenne, I, Goubert, L, Goujard, C, Goulenok, T, Grable, M, Graf, J, Grandin, E, Granier, P, Grasselli, G, Grazioli, L, Green, C, Greene, C, Greenhalf, W, Greffe, S, Grieco, D, Griffee, M, Griffiths, F, Grigoras, I, Groenendijk, A, Lordemann, A, Gruner, H, Gu, Y, Guarracino, F, Guedj, J, Guego, M, Guellec, D, Guerguerian, A, Guerreiro, D, Guery, R, Guillaumot, A, Guilleminault, L, de Castro, M, Guimard, T, Haalboom, M, Haber, D, Habraken, H, Hachemi, A, Hackmann, A, Hadri, N, Haidri, F, Hakak, S, Hall, A, Hall, M, Halpin, S, Hameed, J, Hamer, A, Hamers, R, Hamidfar, R, Hammarstrom, B, Hammond, T, Han, L, Haniffa, R, Hao, K, Hardwick, H, Harrison, E, Harrison, J, Harrison, S, Hartman, A, Hasan, M, Hashmi, J, Hashmi, M, Hayes, A, Hays, L, Heerman, J, Heggelund, L, Hendry, R, Hennessy, M, Henriquez-Trujillo, A, Hentzien, M, Hernandez-Montfort, J, Herr, D, Hershey, A, Hesstvedt, L, Hidayah, A, Higgins, D, Higgins, E, Hinchion, R, Hinton, S, Hiraiwa, H, Hirkani, H, Hitoto, H, Ho, A, Ho, Y, Hoctin, A, Hoffmann, I, Hoh, W, Hoiting, O, Holt, R, Holter, J, Horby, P, Horcajada, J, Hoshino, K, Houas, I, Hough, C, Houltham, S, Hsu, J, Hulot, J, Huo, S, Hussain, I, Ijaz, S, Illes, H, Imbert, P, Imran, M, Sikander, R, Imtiaz, A, Inacio, H, Dominguez, C, Ing, Y, Iosifidis, E, Ippolito, M, Isgett, S, Isidoro, T, Ismail, N, Isnard, M, Istre, M, Itai, J, Ito, A, Ivulich, D, Jaafar, D, Jaafoura, S, Jabot, J, Jackson, C, Jamieson, N, Jaquet, P, Jassat, W, Jaud-Fischer, C, Jaureguiberry, S, Javidfar, J, Jaworsky, D, Jego, F, Jelani, A, Jenum, S, Jimbo-Sotomayor, R, Joe, O, Jorge Garcia, R, Jorgensen, S, Joseph, C, Joseph, M, Joshi, S, Jourdain, M, Jouvet, P, June, J, Jung, A, Jung, H, Juzar, D, Kafif, O, Kaguelidou, F, Kaisbain, N, Kaleesvran, T, Kali, S, Kalicinska, A, Kalleberg, K, Kalomoiri, S, Kamaluddin, M, Kamaruddin, Z, Kamarudin, N, Kamineni, K, Kandamby, D, Kandel, C, Kang, K, Kanwal, D, Kanyawati, D, Karpayah, P, Karsies, T, Kasugai, D, Kataria, A, Katz, K, Kaur, A, Kawasaki, T, Kay, C, Keane, H, Keating, S, Kedia, P, Kelly, A, Kelly, C, Kelly, N, Kelly, Y, Kelsey, M, Kennedy, R, Keomany, S, Kernan, M, Kerroumi, Y, Keshav, S, Kestelyn, E, Khalid, I, Khalid, O, Khalil, A, Khan, C, Khan, I, Khan, Q, Khanal, S, Khatak, A, Khawaja, A, Kherajani, K, Kho, M, Khoo, D, Khoo, R, Khoo, S, Khoso, N, Kiat, K, Kida, Y, Kihuga, H, Kiiza, P, Granerud, B, Kildal, A, Kim, J, Kimmoun, A, Kindgen-Milles, D, King, A, Kitamura, N, Kjetland, E, Klenerman, P, Klont, R, Bekken, G, Knight, S, Kobbe, R, Kodippily, C, Vasconcelos, M, Koirala, S, Komatsu, M, Korten, V, Kosgei, C, Kpangon, A, Krawczyk, K, Krishnan, S, Krishnan, V, Kruglova, O, Kumar, D, Kumar, G, Kumar, M, Vecham, P, Kuriakose, D, Kurtzman, E, Kusumastuti, N, Kutsogiannis, D, Kutsyna, G, Kyriakoulis, K, L'Her, E, Lachatre, M, Lacoste, M, Laffey, J, Lagrange, M, Laine, F, Lairez, O, Lakhey, S, Lalueza, A, Lambert, M, Lamontagne, F, Langelot-Richard, M, Langlois, V, Lantang, E, Lanza, M, Laouenan, C, Laribi, S, Lariviere, D, Lasry, S, Lath, S, Latif, N, Launay, O, Laureillard, D, Lavie-Badie, Y, Law, A, Lawrence, C, Lawrence, T, Le, M, Le Bihan, C, Le Bris, C, Le Falher, G, Le Fevre, L, Le Hingrat, Q, Le Marechal, M, Le Mestre, S, Le Moal, G, Le Moing, V, Le Nagard, H, Le Turnier, P, Leal, E, Santos, M, Lee, B, Lee, H, Lee, S, Lee, T, Lee, Y, Leeming, G, Lefebvre, B, Lefebvre, L, Lefevre, B, Legac, S, Lelievre, J, Lellouche, F, Lemaignen, A, Lemee, V, Lemeur, A, Lemmink, G, Lene, H, Lennon, J, Leon, R, Leone, M, Lepiller, Q, Lescure, F, Lesens, O, Lesouhaitier, M, Lester-Grant, A, Letizia, A, Levy, B, Levy, Y, Levy-Marchal, C, Lewandowska, K, Bassi, G, Liang, J, Liaquat, A, Liegeon, G, Lim, K, Lim, W, Lima, C, Lina, B, Lina, L, Lind, A, Lingad, M, Lingas, G, Lion-Daolio, S, Lissauer, S, Liu, K, Livrozet, M, Lizotte, P, Loforte, A, Lolong, N, Loon, L, Lopes, D, Lopez-Colon, D, Loschner, A, Loubet, P, Loufti, B, Louis, G, Lourenco, S, Lovelace-Macon, L, Low, L, Lowik, M, Loy, J, Lucet, J, Bermejo, C, Luna, C, Lungu, O, Luong, L, Luque, N, Luton, D, Lwin, N, Lyons, R, Maasikas, O, Mabiala, O, Macdonald, S, Machado, M, Macheda, G, Sanchez, J, Madhok, J, Madiha, H, de la Calle, G, Magara, J, Maglietta, G, Mahieu, R, Mahy, S, Maia, A, Maier, L, Maillet, M, Maitre, T, Majori, M, Malfertheiner, M, Malik, N, Mallon, P, Maltez, F, Malvy, D, Mammi, P, Manda, V, Mandei, J, Mandelbrot, L, 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Mergeay-Fabre, M, Mergler, B, Meschi, T, Mesquita, A, Meta, R, Metwally, O, Meybeck, A, Meyer, D, Meynert, A, Meysonnier, V, Meziane, A, Mezidi, M, Michelagnoli, G, Michelanglei, C, Michelet, I, Mihelis, E, Mihnovit, V, Miranda-Maldonado, H, Misnan, N, Mohamed, N, Mohamed, T, Moin, A, Molina, D, Molinos, E, Molloy, B, Mone, M, Monteiro, A, Montes, C, Montrucchio, G, Moore, S, Cely, L, Moro, L, Tutillo, D, Morton, B, Motherway, C, Motos, A, Mouquet, H, Perrot, C, Moyet, J, Mudara, C, Mufti, A, Muh, N, Muhamad, D, Mullaert, J, Muller, F, Muller, K, Munblit, D, Muneeb, S, Munir, N, Munshi, L, Murphy, A, Murphy, L, Murris, M, Musaab, H, Mutti, C, Muvindi, H, Muyandy, G, Myrodia, D, Mohd-Hanafiah, F, Nagpal, D, Narasimhan, M, Narayanan, N, Khan, R, Nazerali-Maitland, A, Neant, N, Neb, H, Necsoi, C, Nekliudov, N, Nelwan, E, Neto, R, Neumann, E, Neves, B, Ng, P, Ng, W, Nghi, A, Ngure, J, Nguyen, D, Choileain, O, Leathlobhair, N, Nichol, A, Nitayavardhana, P, Nonas, S, Noordin, N, Noret, M, 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- Abstract
The International Severe Acute Respiratory and Emerging Infection Consortium (ISARIC) COVID-19 dataset is one of the largest international databases of prospectively collected clinical data on people hospitalized with COVID-19. This dataset was compiled during the COVID-19 pandemic by a network of hospitals that collect data using the ISARIC-World Health Organization Clinical Characterization Protocol and data tools. The database includes data from more than 705,000 patients, collected in more than 60 countries and 1,500 centres worldwide. Patient data are available from acute hospital admissions with COVID-19 and outpatient follow-ups. The data include signs and symptoms, pre-existing comorbidities, vital signs, chronic and acute treatments, complications, dates of hospitalization and discharge, mortality, viral strains, vaccination status, and other data. Here, we present the dataset characteristics, explain its architecture and how to gain access, and provide tools to facilitate its use.
- Published
- 2022